mRNA_9739 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|351120
Unique NamemRNA_9739
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|351120 vs. uniprot
Match: A0A835YJ18_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJ18_9STRA)

HSP 1 Score: 1079 bits (2790), Expect = 0.000e+0
Identity = 560/564 (99.29%), Postives = 560/564 (99.29%), Query Frame = 1
Query:    1 MILIPHSFRACLQYDAEYVELETDQPYCTIAVVFSPDGTTFASTHGDHTVKVTDFATAKLLRCFAGHPRTPWTVKYHPTNSNLLASGCLGGELRVWDVQQGTCLKVYSFGDSVISLSFHPTSSVLAISSGRRVHTWAYDKQQLPHCEMQNDRNVRCVCFNPKDGGSLLIAVANGMQAGGGAGSTAASKTPTFTLTMWDFDLSAALSGTVPALMRQRVVLSRALLYNDSGVDLSACGRFLCGCAEFWVEERPQQQDXXXXXXXXXXXXXXXAWEDKLGVRRVRDLIARGSTVGLKRPLSLQVSTWDQGGAREDAGHEACPTNTPRALTPDSPWGIDCLQADTTPERPGRYVPHLVLLQLRWGRGPDCGHRWCEGSAGCGGEGSVRLLQASTLSFNALGITSIKFSPLARYMLLGRGVRDVASEDIEDDQELMPATCIYRCKDLTMVNMLNTESDDVNCARFHPTPGMGFAYGARQGGVRLMRCAPAPPAPGAVATGLVSGTLLQPRPIPCRGEGRGGEXXXXXXXXXXXXXXXVWGFAPTPMPTVTAAAAXXXRVAAAAMPAGGG 1692
            MILIPHSFRACLQYDAEYVELETDQPYCTIAVVFSPDGTTFASTHGDHTVKVTDFATAKLLRCFAGHPRTPWTVKYHPTNSNLLASGCLGGELRVWDVQQGTCLKVYSFGDSVISLSFHPTSSVLAISSGRRVHTWAYDKQQLPHCEMQNDRNVRCVCFNPKDGGSLLIAVANGMQAGGGAGSTAASKTPTFTLTMWDFDLSAALSGTVPALMRQRVVLSRALLYNDSGVDLSACGRFLCGCAEFWVEERPQQQDXXXXXXXXXXXXXXXAWEDKLGVRRVRDLIARGSTVGLKRPLSLQVSTWDQGGAREDAGHEACPTNTPRALTPDSPWGIDCLQADTTPERPGRYVPHLVLLQLRWGRGPDCGHRWCEGSAGCGGEGSVRLLQASTLSFNALGITSIKFSPLARYMLLGRGVRDVASEDIEDDQELMPATCIYRCKDLTMVNMLNTESDDVNCARFHPTPGMGFAYGARQGGVRLMRCAPAPPAPGAVATGLVSGTLLQPRPIPCRGEGRGGEXXXXXXXXXXXXXXX WGFAPTPMPTVTAAAA   RVAAAAMPAGGG
Sbjct:    1 MILIPHSFRACLQYDAEYVELETDQPYCTIAVVFSPDGTTFASTHGDHTVKVTDFATAKLLRCFAGHPRTPWTVKYHPTNSNLLASGCLGGELRVWDVQQGTCLKVYSFGDSVISLSFHPTSSVLAISSGRRVHTWAYDKQQLPHCEMQNDRNVRCVCFNPKDGGSLLIAVANGMQAGGGAGSTAASKTPTFTLTMWDFDLSAALSGTVPALMRQRVVLSRALLYNDSGVDLSACGRFLCGCAEFWVEERPQQQDXXXXXXXXXXXXXXXAWEDKLGVRRVRDLIARGSTVGLKRPLSLQVSTWDQGGAREDAGHEACPTNTPRALTPDSPWGIDCLQADTTPERPGRYVPHLVLLQLRWGRGPDCGHRWCEGSAGCGGEGSVRLLQASTLSFNALGITSIKFSPLARYMLLGRGVRDVASEDIEDDQELMPATCIYRCKDLTMVNMLNTESDDVNCARFHPTPGMGFAYGARQGGVRLMRCAPAPPAPGAVATGLVSGTLLQPRPIPCRGEGRGGEXXXXXXXXXXXXXXXXWGFAPTPMPTVTAAAAPAARVAAAAMPAGGG 564          
BLAST of jgi.p|Trimin1|351120 vs. uniprot
Match: A0A1V9ZH75_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZH75_9STRA)

HSP 1 Score: 254 bits (650), Expect = 6.840e-72
Identity = 181/489 (37.01%), Postives = 245/489 (50.10%), Query Frame = 1
Query:   88 IAVVFSPDGTTFASTHGDHTVKVTDFATAKLLRCFAGHPRTPWTVKYHPTNSNLLASGCLGGELRVWDVQQGTCLKVYSFGDSVISLSFHPTSSVLAISSGRRVHTWAYDKQQLPHCEMQNDRNVRCVCFNPKDGGSLLIAVANGMQAGGGAGSTAASKTPTFTLTMWDFDLSAALSG---TVPALMRQRVVLSRALLYNDSGVDLSACGRFLCGCAEF--WVEERPQQQDXXXXXXXXXXXXXXXAWE--------DKLGVRRVRDLIARG--STVGLK----RPLSLQVSTWDQ---GGAREDAGH-EACPTNTPRALTPDSPW-------GIDCLQADTTPERPGRYVPHLVLLQLRWG------RGPDCGHRWCEGSA--GCGGEGSVRLLQASTLSFNALG-ITSIKFSPLARYMLLGRGVRDVASEDIEDDQELMPATCIYRCKDLTMVNMLNTESDDVNCARFHPTPGMGFAYGARQGGVRL 1437
            I++ FSPDG TFASTHGDHTVK+  + T K+L+   GHPRTPW+VKYHPTN   +ASGCLG ++R WDV  G CL   +   ++IS+SFHP+ +++ I+SG  V+TW Y +  LP   M + + +R V F P D   LLI  AN    G   G+  A  T   TLT+WD+D   + S       A+   RV+LS ALLYND G D+S CG++L  C ++  W  ER  + D               +            LG  +  D IA    S   L+    R   +Q S+ +Q   G  R   G  E  PT   R  T            G +     T P R  +  PH+   + R        RG    H      A      +    ++Q + L+  A G +TS+KFSP   Y+LLG GVRD       +   L   T IYR +D+T+V+ + +E DDVN A FHP PG GF YG +QG +R+
Sbjct:   95 ISIAFSPDGKTFASTHGDHTVKIICYRTGKILQTLVGHPRTPWSVKYHPTNPRYVASGCLGFQIRFWDVYSGQCLYEATLRHAIISVSFHPSGNIIGIASGTCVYTWDY-QHSLPRIAMFSYQTLRSVSFLP-DANKLLIGEANEKYGGRPIGAAPADLT--VTLTLWDYDPMWSTSVEPMATRAMYNPRVLLSHALLYNDGGFDISKCGQYLAVCTDYSLWQAEREAEMDSQQDLEEIQQRAVVPSSAPLTSLTPPSVLGTSQTLDNIASEILSLSHLRHQSHRFYVVQASSSEQAIYGHLRRRPGTPEQYPTRRLRQRTDSEQTMRLSLENGAEETNTTTVPCRVAQIRPHIASSRTRLSITQRAQRGQLAPHYQSTWLALISLADDTFGSVVQTTLLAETAAGGVTSVKFSPTGAYVLLGYGVRDRIQRI--NQFPLHRVTRIYRWEDMTLVSHMESEVDDVNIALFHPLPGHGFIYGTKQGRLRV 577          
BLAST of jgi.p|Trimin1|351120 vs. uniprot
Match: A0A1V9Z0D3_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z0D3_9STRA)

HSP 1 Score: 253 bits (647), Expect = 2.100e-71
Identity = 179/495 (36.16%), Postives = 246/495 (49.70%), Query Frame = 1
Query:   88 IAVVFSPDGTTFASTHGDHTVKVTDFATAKLLRCFAGHPRTPWTVKYHPTNSNLLASGCLGGELRVWDVQQGTCLKVYSFGDSVISLSFHPTSSVLAISSGRRVHTWAYDKQQLPHCEMQNDRNVRCVCFNPKDGGSLLIAVANGMQAGGGAGSTAASKTPTFTLTMWDFDLSAALSG---TVPALMRQRVVLSRALLYNDSGVDLSACGRFLCGCAEF--WVEERPQQQDXXXXXXXXXXXXXXXAW----------------EDKLGVRRVRD------LIARGSTVGL------KRPLSLQVSTWDQGGAREDAGHE---ACPTNTPRALTPDSPWGIDCLQADTTPERPGRYVPHLVLLQLRWG------RGPDCGHRWCEGSA--GCGGEGSVRLLQASTLSFNALG-ITSIKFSPLARYMLLGRGVRDVASEDIEDDQELMPATCIYRCKDLTMVNMLNTESDDVNCARFHPTPGMGFAYGARQGGVRL 1437
            I++ FSPDG TFASTHGDHTVK+  + T K+L+   GHPRTPW+VKYHPTN   +ASGCLG ++R WDV  G CL   +   ++IS+SFHP+ +++ I+SG  V+TW Y +  LP   M + + +R V F P D   LLI  AN  + G   G+  A  T   TLT+WD+D   + S       A+   RV+LS ALLYND G D+S CG++L  C ++  W  ER  + D               A                  + L + ++R       ++   ST         +RP++    T  +   R D+         T T  A TP    G     A T P R  +  PH+   + R        RG    H      A      E    +LQ + L+  A G +TS+KFSP   Y+LLG GVRD       +   L   T IYR +D+ +V+ + +E DDVN A FHP PG GF YG +QG +R+
Sbjct:   95 ISIAFSPDGKTFASTHGDHTVKIICYRTGKILQTLEGHPRTPWSVKYHPTNPRYVASGCLGFQIRFWDVYSGQCLYEATLRHAIISVSFHPSGNIIGIASGTCVYTWDY-QHSLPRIAMFSYQTLRSVSFLP-DANKLLIGEAN-EKYGRPIGAVPADLT--VTLTLWDYDPMWSTSVEPMATRAMYNPRVLLSHALLYNDGGFDISKCGQYLAVCTDYSLWQAEREAEMDSQQDLEEIQQRTVAPAAAPLVPSPQPHVLDALASEVLSLSQMRHQSHRFYVVQSSSTDQATHGHLRRRPITPDTFTTRRLRPRTDSSQVLRLTLDTTTDEATTP----GATTTAAPTVPCRVAQIRPHIASSRTRLSMTQRAQRGQLAPHYQSTWLALISLSDETFGSVLQTTLLAETAAGGVTSVKFSPTGAYVLLGYGVRDRIQRI--NQFPLHRVTRIYRWEDMALVSHMESEVDDVNIALFHPLPGHGFIYGTKQGRLRV 578          
BLAST of jgi.p|Trimin1|351120 vs. uniprot
Match: T0QLI3_SAPDV (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0QLI3_SAPDV)

HSP 1 Score: 253 bits (646), Expect = 2.610e-71
Identity = 176/487 (36.14%), Postives = 242/487 (49.69%), Query Frame = 1
Query:   88 IAVVFSPDGTTFASTHGDHTVKVTDFATAKLLRCFAGHPRTPWTVKYHPTNSNLLASGCLGGELRVWDVQQGTCLKVYSFGDSVISLSFHPTSSVLAISSGRRVHTWAYDKQQLPHCEMQNDRNVRCVCFNPKDGGSLLIAVANGMQAGGGAGSTAASKTPTFTLTMWDFDLSAALSG---TVPALMRQRVVLSRALLYNDSGVDLSACGRFLCGCAEF--WVEERPQQQDXXXXXXXXXXXXXXXAWEDKLGVRRVRDLIARGSTVGLK-------RPLSLQVSTWDQGGAREDAGHEACP-----------TNTPRAL-----TPDSPWGIDCLQADTTPERPGRYVPHLVLLQLRWG------RGPDCGHRWCEGSA--GCGGEGSVRLLQASTLSFNALG-ITSIKFSPLARYMLLGRGVRDVASEDIEDDQELMPATCIYRCKDLTMVNMLNTESDDVNCARFHPTPGMGFAYGARQGGVRL 1437
            I++ FSPDG TFASTHGDHTVK+  + T K+L+   GHPRTPW+VKYHPTN   +ASGCLG ++R WDV  G CL   +   ++IS+SFHP+ +++ I+SG  V+TW Y +  LP   M + + +R V F P D   LLI  AN  + G   G+  A  T   TLTMWD+D   + S       A+   RV+LS ALLYND G D+S CG++L  C ++  W  ER  + D                         + + +A    + L        R   +Q S+ DQ            P           T++  AL     TP +    D   +   P R  +  PH+   + R        RG    H      A      E    ++Q + L+  A G +TS+KFSP   Y+LLG GVRD       +   L   T IYR +D+T+V+ + +E DDVN A FHP PG GF YG +QG +R+
Sbjct:   95 ISIAFSPDGKTFASTHGDHTVKIICYRTGKILQTLVGHPRTPWSVKYHPTNPRYVASGCLGFQIRFWDVYSGQCLYEATLRHAIISVSFHPSGNIIGIASGTCVYTWDY-QHSLPRIAMFSYQTLRSVSFLP-DANKLLIGEAN-EKYGRPLGAVPADLT--VTLTMWDYDPMWSTSVEPMATRAMFNPRVLLSHALLYNDGGFDISKCGQYLAVCTDYSLWQAEREAEMDSQHDVDEIQQRAAAVPPSVPSPQPHILENVAASEILSLSQLRHQSHRFYVVQSSSTDQSLQGHLRRRPGTPEQYTTRRLRQRTDSQHALRLSLETPSTTTTNDDAASTAVPCRVAQIRPHIASSRTRLSMTQRAQRGQLAPHYQSTWLALISLSDETFGNVVQTTLLAETAAGGVTSVKFSPTGAYVLLGYGVRDRIQRI--NQFPLHRVTRIYRWEDMTLVSHMESEVDDVNIALFHPLPGHGFIYGTKQGRLRV 574          
BLAST of jgi.p|Trimin1|351120 vs. uniprot
Match: A0A6G0WMI1_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WMI1_9STRA)

HSP 1 Score: 251 bits (640), Expect = 8.250e-71
Identity = 179/493 (36.31%), Postives = 241/493 (48.88%), Query Frame = 1
Query:   70 DQPYCT---IAVVFSPDGTTFASTHGDHTVKVTDFATAKLLRCFAGHPRTPWTVKYHPTNSNLLASGCLGGELRVWDVQQGTCLKVYSFGDSVISLSFHPTSSVLAISSGRRVHTWAYDKQQLPHCEMQNDRNVRCVCFNPKDGGSLLIAVANGMQAGGGAGSTAASKTPTFTLTMWDFDLSAALS---GTVPALMRQRVVLSRALLYNDSGVDLSACGRFLCGCAEF--WVEERPQQQ------------DXXXXXXXXXXXXXXXAWEDKLG----------VRRVRDLIARGSTVGLKRPLSLQVSTWDQGGAREDAGHEACPTNTPRALTPDSPWGIDCLQADTTPERPGRYVPH----LVLLQLRWGRGPDCGHRWCEGSAGCGGEGSVRLLQASTLSFNALG-ITSIKFSPLARYMLLGRGVRDVASEDIEDDQELMPATCIYRCKDLTMVNMLNTESDDVNCARFHPTPGMGFAYGARQGGVRLMR 1443
            D P  T   I++ FSPDG TFASTHGDHTVK+  +AT ++L+   GHPRTPW+VKYHPTN   +ASGCLG ++R WDV  G CL   +   ++IS+SFHP+ +V+ I+SG  V+TW Y +   P   M + + +R V F P D   +LI  AN +      GS  +  T   TLT+WD+DLS + S   GT  A+   RV+L+ ALLYND G D+S CG +L  C +F  W  E+ +              D                W  +             RR+R  +     V    P                A  EA        + P+    +  L  D   +R    V +    L LL L     PD               GSV  +Q S L+  A G +TS+KFSP   Y+LLG GVRD       +   L   T IYR +D+++V+ + ++ DDVN A FHP PG GF YG +QG VR+ R
Sbjct:   85 DMPSTTRSAISIAFSPDGKTFASTHGDHTVKIVCYATGRILQTLVGHPRTPWSVKYHPTNPRYVASGCLGYQIRFWDVYTGKCLYEATLRHAIISVSFHPSGNVIGIASGTCVYTWDY-QHSAPRIAMFSYQTLRSVSFLP-DATKILIGEANEVYTRP-LGSVPSDLT--VTLTLWDYDLSWSTSTEPGTTKAMRSPRVLLTHALLYNDGGFDISKCGNYLAVCTDFSLWQAEQDEPALTTPAPSLRNHCDNPRLYLVPDWPLSASTWTARRRRALVPDIPPTARRIRPRLDEQGHVATAPPARXXXXXXXXXSVYA-APSEASGACRIAQIRPNIASSLTLLSRDQRLQRGRLAVEYQSTWLALLSLA----PDASL------------GSV--VQTSLLAETAAGGVTSVKFSPSGAYVLLGYGVRDRIQRI--NQFPLHRVTRIYRWEDMSLVSHVESDVDDVNIALFHPLPGFGFLYGTKQGRVRVAR 551          
BLAST of jgi.p|Trimin1|351120 vs. uniprot
Match: A0A485KBC9_9STRA (Aste57867_3431 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KBC9_9STRA)

HSP 1 Score: 245 bits (625), Expect = 2.070e-68
Identity = 182/520 (35.00%), Postives = 248/520 (47.69%), Query Frame = 1
Query:   10 IPHSFRACLQYDAEYVELET---------DQPYCT---IAVVFSPDGTTFASTHGDHTVKVTDFATAKLLRCFAGHPRTPWTVKYHPTNSNLLASGCLGGELRVWDVQQGTCLKVYSFGDSVISLSFHPTSSVLAISSGRRVHTWAYDKQQLPHCEMQNDRNVRCVCFNPKDGGSLLIAVANGMQAGGGAGSTAASKTPTFTLTMWDFDLS---AALSGTVPALMRQRVVLSRALLYNDSGVDLSACGRFLCGCAEFWVEERPQQQDXXXXXXXXXXXXXXXAWEDKLGVRRVRDLIARGSTVGLKRPLSLQVSTWDQ--GGAREDAGHEACPTNTPRALTPDSPWGIDCLQ------------ADTTPERPGRYV---PHLVLLQLRWGRGP---------DCGHRWCEGSAGCGGEGSVRLLQASTLSFNALG-ITSIKFSPLARYMLLGRGVRDVASEDIEDDQELMPATCIYRCKDLTMVNMLNTESDDVNCARFHPTPGMGFAYGARQGGVRLMR 1443
            I H  R     +A +VE E+         D P  T   I++ FSPDG TFASTHGDHTVK+  ++T ++L+   GHPRTPW+VKYHPTN   +ASGCLG ++R WDV  G CL   +   ++IS+SFHP+  ++ I+SG  V+TW Y +   P   M + + +R V F P D   +LI  AN        GS  +  T   TLT+WD+D+S   A   G   A+   RV+L+ ALLYND G D+S CG +L  C +F + +  Q                  +   + G       I     +     L     +W    GG      H     +  RAL PD P      Q            A  TPE P R     P++     R  R           +    W    +         +LQ S L+  A G +TS+KFSP   Y+LLG GVRD       +   L   T IYR +D+++V+ + ++ DDVN A FHP PG GF YG +QG VR+ R
Sbjct:   64 IGHGRRYAFHDEAMWVENESATKHECDYFDMPATTRSAISIAFSPDGKTFASTHGDHTVKIICYSTGRILQTLVGHPRTPWSVKYHPTNPRYVASGCLGYQIRFWDVYTGKCLYEATLRHAIISVSFHPSGDIIGIASGTCVYTWDY-QHSGPRIAMFSYQTLRSVSFLP-DASKILIGEANEKYTRP-LGSVPSDLT--VTLTLWDYDVSWSKATDPGAHKAMSLPRVLLTHALLYNDGGFDVSKCGNYLAVCTDFSLWQAEQDVPGGAATDTTVMPDQSSSPGHR-GTXXXXTSIDPSEVLTTNPRLYFVPDSWPAPAGGWTAANNH-----HRRRALVPDIPPARRIRQRLDEASTLPPGLATGTPEVPCRIAQIRPNIASSLTRLSRNQRLTRGRLAVEYQSTWLALISLAPDATLGAVLQTSLLAETAAGGVTSVKFSPSGAYVLLGYGVRDRIQRI--NQFPLHRVTRIYRWEDMSLVSHVESDVDDVNIALFHPLPGFGFLYGTKQGRVRVCR 570          
BLAST of jgi.p|Trimin1|351120 vs. uniprot
Match: W4GBB9_9STRA (Uncharacterized protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GBB9_9STRA)

HSP 1 Score: 236 bits (603), Expect = 4.790e-65
Identity = 178/540 (32.96%), Postives = 252/540 (46.67%), Query Frame = 1
Query:   16 HSFRACLQYDAEYVELET---------DQPYCT---IAVVFSPDGTTFASTHGDHTVKVTDFATAKLLRCFAGHPRTPWTVKYHPTNSNLLASGCLGGELRVWDVQQGTCLKVYSFGDSVISLSFHPTSSVLAISSGRRVHTWAYDKQQLPHCEMQNDRNVRCVCFNPKDGGSLLIAVANGMQAGGGAGSTAASKTPTFTLTMWDFDLS---AALSGTVPALMRQRVVLSRALLYNDSGVDLSACGRFLCGCAEF--WVEERP----------QQQDXXXXXXXXXXXXXXXAWEDKLGVRRVRDLIARGSTVG----LKRPLSLQVSTWDQGGAR-------------------------EDAGHEACPT------NTPRALTPDSPWGIDCLQADTTPERPGRYVPHLVLLQLRWGR-GPDCGHRWCEGSAGCGGEGSVRLLQASTLSFNALG-ITSIKFSPLARYMLLGRGVRDVASEDIEDDQELMPATCIYRCKDLTMVNMLNTESDDVNCARFHPTPGMGFAYGARQGGVRLMR 1443
            H  R     +A ++E E+         D P  T   I++ FSPDG TFASTHGDHTVK+  FAT ++L+   GHPRTPW+VK+HPTN   +ASGCLG ++R WDV  G CL   +   ++IS+SFHP  +VL I+SG  V+TW Y +  +P   M +++ +R V F P D   +L+  AN        G+  +  T   TLT+W+FDL+   A+   T  A+    V+L+ ALLYND G D+S CG++L  C +F  W  E+           Q  D                      V  V D  +  +T       +R L   +   D    R                           + H   P        TP+A  P       C  A   P     +       +L  GR   +    W    +    +    ++Q + L+  A G +TS+KFSP   Y+LLG GVRD       +   L   T +YR +D+++V+ + +++DDVN A FHP PG GF YG +QG VRL R
Sbjct:   65 HGRRYAFHDEAMWIENESATKHVCEYFDMPSTTRSAISIAFSPDGKTFASTHGDHTVKIVCFATGRILQTLVGHPRTPWSVKFHPTNPRYVASGCLGYQIRFWDVVTGKCLYEATLRHAIISVSFHPCGTVLGIASGTCVYTWDYQQHSIPRIAMFSNQTLRSVSFLP-DPTKILVGEANEKYTRP-LGTVPSDLT--VTLTLWEFDLAWSVASEPSTSKAMYSPHVLLTHALLYNDGGFDVSKCGQYLAVCTDFSLWQAEQDIPLAYPDSSTQNSDAEGNTPPSGFPHVSSNPLPSRSVYFVPDWPSLNTTAPNLPPRRRALVTDLPPNDAAARRIRQRLVEVXXXXXXSLTSLSHARHAPTSNHPLMPAVVGTADGTPQAAAP-------CRMAQLRPNIASSFNRTSNDQRLARGRLAVEHQSTWLALLSLAPDKTLGTVVQTALLAETAAGGVTSVKFSPSGAYVLLGYGVRDRIQRI--NQFPLHRVTRMYRWEDMSLVSHVESDADDVNIALFHPLPGGGFLYGTKQGRVRLCR 591          
BLAST of jgi.p|Trimin1|351120 vs. uniprot
Match: A0A024GQH6_9STRA (Uncharacterized protein n=2 Tax=Albugo candida TaxID=65357 RepID=A0A024GQH6_9STRA)

HSP 1 Score: 230 bits (587), Expect = 1.300e-62
Identity = 171/538 (31.78%), Postives = 260/538 (48.33%), Query Frame = 1
Query:   25 RACLQYDAEYVELETDQPYCTIAVVFSPDGTTFASTHGDHTVKVTDFATAKLLRCFAGHPRTPWTVKYHPTNSNLLASGCLGGELRVWDVQQGTCLKVYSFGDSVISLSFHPTSSVLAISSGRRVHTWAYDKQQLPHCEMQNDRNVRCVCFNPKDGGSLLIAVANGMQAGGGAGSTAASKTPTFTLTMWDFDLSAALSGTVPALMR----QRVVLSRALLYNDSGVDLSACGRFLCGCAEFWVEERPQQQDXXXXXXXXXXXXXXXAWE--------DKLGVRR--VRDLIARGSTVGL-----------KRPLSL-QVSTWDQGGAREDAGHEACPT-----------------NTPRALTPDSPWGIDCLQADTTPERPG-------RYVPHLVLLQLRWGRGPDCGHRWCEGSAGCGGEGSVRLLQASTLSFNALG---------------ITSIKFSPLARYMLLGRGVRDVASEDIEDDQELMPATCIYRCKDLTMVNMLNTESDDVNCARFHPTPGMGFAYGARQGGVRLMR 1443
            ++ +++ + Y +L  D    TI++  SP+G  FASTHGDHTVK+  + T ++L+   GHPRTPW+VK+HPTNS  +ASGCLG ++R WD++ G CL V +   ++IS+SFHP+  +LAI+SG  V+TW Y +   P   M + + +R V F P D   +L+  AN  +        A+S   T T+T+WDFD + ALS    AL +     RVVLS AL+YND G D+S CGR+L  C +  + +  ++ +                 +        +++ + R  V + I     V L            R +SL  + T +       A  +   T                  T   L    P+G+       +P RP        +  P++ L +LR+ R      R+   S     E     L   +L  N LG               +TS+K SP++ Y LLG GVRD      E+       T IYR  D+ +++ + +++DDVN A F+P PG GF YG +QG +R+ +
Sbjct:   62 QSAIKHSSRYSQLP-DTTKSTISIAISPNGKLFASTHGDHTVKIICYETGRILQTLVGHPRTPWSVKFHPTNSRFVASGCLGFQVRFWDIESGRCLYVTALRHAIISISFHPSGDILAIASGTCVYTWDY-QHSCPRIAMFSYQTLRSVTFLP-DHSKILVGEAN--ERYNRPQGHASSSDLTVTITLWDFDPTWALSTEPSALKKAMHNSRVVLSHALIYNDGGFDISKCGRYLAICVDLSLRQAEKELEMEAINDLEQILAHDSVQDGSSSNDEVNQVPIPRISVHNAIPSIQNVALPTLPQHHSNNRSRQMSLPSLQTLNTVSMAHSASFDFSSTMDEYMNQHFRRVRARLQQTSVQLHRQYPFGMA-----RSPGRPQLVSQGHPQIRPNIALSRLRFSRAQRA-QRYQLAS-----EVQSTWLTLISLEANDLGKIIQTCHLAETLAGGVTSVKISPVSAYALLGYGVRDRMQR--ENMVSTHRVTRIYRWDDMKLLSHVESDTDDVNIALFNPIPGGGFIYGTKQGKLRVCK 581          
BLAST of jgi.p|Trimin1|351120 vs. uniprot
Match: A0A024TP79_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TP79_9STRA)

HSP 1 Score: 223 bits (567), Expect = 6.130e-60
Identity = 169/511 (33.07%), Postives = 239/511 (46.77%), Query Frame = 1
Query:   88 IAVVFSPDGTTFASTHGDHTVKVTDFATAKLLRCFAGHPRTPWTVKYHPTNSNLLASGCLGGELRVWDVQQGTCLKVYSFGDSVISLSFHPTSSVLAISSGRRVHTWAYDKQQLPHCEMQNDRNVRCVCFNPKDGGSLLIAVANGMQAGGGAGSTAASKTPTFTLTMWDFDLS---AALSGTVPALMRQRVVLSRALLYNDSGVDLSACGRFLCGCAEFWVEERPQQQDXXXXXXXXXXXXXXXAWE-DKLGVRRVR---DLIARGSTVGLK-----------------------------------------RPLSLQVSTWDQGGAREDAGHEACPT-NTPRA-----LTPDSPWGIDCLQADTTPERPGRYVPH----LVLLQLRWGRGPDCGHRWCEGSAGCGGEGSVRLLQASTLSFNALG-ITSIKFSPLARYMLLGRGVRDVASEDIEDDQELMPATCIYRCKDLTMVNMLNTESDDVNCARFHPTPGMGFAYGARQGGVRLMR 1443
            I++ FSPDG TFASTHGDHTVK+  ++T ++L+   GHPRTPW+VK+HPTN   +ASGCLG ++R WDV  G CL   +   ++IS+SFHP  +VL I+SG  V+TW Y     P   M +++ +R V F P D   +L+  AN        G+  +  T   TLT+W+++++   A    +  A+    V+L+ ALLYND G D+S CG++L  C +F + +  Q                  A   D L   RV    +  A   T                                             RP SL  ST         + H   P  + P+A     L P+     + L  D    R    V H    L LL L     PD              +    ++Q + L+  A G +TS+KFSP   Y+LLG GVRD       +   L   T +YR +D+++V+ + +++DDVN A FHP  G GF YG +QG VRL R
Sbjct:  103 ISIAFSPDGKTFASTHGDHTVKIVCYSTGRILQTLVGHPRTPWSVKFHPTNPRYVASGCLGYQIRFWDVVTGKCLYEATLRHAIISVSFHPCGNVLGIASGTCVYTWDYQHHPSPRIVMFSNQTLRSVSFLP-DPTKILVGEANEKYTRP-LGTVPSDLT--VTLTLWEYNVAWSTAPEPSSSKAMHSPHVLLTHALLYNDGGFDVSKCGQYLAVCTDFSLWQAEQDMPPPSHVDHPSPFYGQNAHSADPLAPHRVYFVPEWPALNPTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTHPDAIHTRP-SLAASTMGHPPVVPSSQHPVIPAPSAPQACRMAHLRPNIASSFNRLSHDQRLTRGRLAVEHQSTWLALLSLA----PD--------------KTLGTVVQTALLAETAAGGVTSVKFSPSGAYVLLGYGVRDRIQRI--NQFPLHRVTRMYRWEDMSLVSHVESDADDVNIALFHPLAGGGFLYGTKQGRVRLCR 588          
BLAST of jgi.p|Trimin1|351120 vs. uniprot
Match: A0A7S2P0E3_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2P0E3_9STRA)

HSP 1 Score: 216 bits (551), Expect = 1.640e-57
Identity = 106/232 (45.69%), Postives = 147/232 (63.36%), Query Frame = 1
Query:   85 TIAVVFSPDGTTFASTHGDHTVKVTDFATAKLLRCFAGHPRTPWTVKYHPTNSNLLASGCLGGELRVWDVQQGTCLKVYSFGDSVISLSFHPTSSVLAISSGRRVHTWAYDKQQLPHCEMQNDRNVRCVCFNPKDGGSLLIAVANGMQAGGGAGSTAASKTPTFTLTMWDFDLSAALSGTVPA-------------LMRQRVVLSRALLYNDSGVDLSACGRFLCGCAEFWV 741
            TI V F+PDG+T ASTHGDHTVK+T  AT +L++   GHPRTPWTVK+HP++S + ASGCLG ++RVWD ++G CLK+     +VISLSFHP   +L+++SG  ++ W Y+K+  PH E  +D ++RCV F P  GG  +I        GG      +    T +L +WDFD  AA++ + P+             L   R+ L RALLYND G D+S CG+FL  C+E+W+
Sbjct:   93 TICVAFAPDGSTLASTHGDHTVKITCCATGRLIQSMEGHPRTPWTVKFHPSDSGICASGCLGHQVRVWDTKEGVCLKMVRLYSAVISLSFHPRGGLLSMASGNGLYIWNYEKRDSPHPEFMHDHSLRCVSFTP--GGDRIIV-------GGFVKRAHSRDKDTHSLRLWDFDYEAAVNQSSPSDNENLNNSTENQMLSNCRIFLHRALLYNDGGFDVSPCGKFLIACSEWWL 315          
BLAST of jgi.p|Trimin1|351120 vs. uniprot
Match: A0A835YNR0_9STRA (SAP domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNR0_9STRA)

HSP 1 Score: 914 bits (2363), Expect = 0.000e+0
Identity = 786/786 (100.00%), Postives = 786/786 (100.00%), Query Frame = 2
Query:   62 MPSKAVPVAVVAFALCLGTHAFLSPQSCTAQRRASAAPQLSMSSGSGNGGDDMAKLRRDLAVSVAAASLFVLPAIATANEFPSGAGSSFAQEQKLLQKLLKEDTEVKAETVPDVPAAPQVEVPPWMALPEVQPVGGGLKLREPVFQKFDFTKALEGMDFKLGAPDYGKYKFNINAAAPTRWEDRPPVNVPPQLQSVLTNLAQKRAELQAAWERAPPLPADAAAALQALDDAATKALKPYLKDDVPPGFALGLLASAGVAAAGLNSAAANAGAASYKGSYGGSSXXXXXXXXXAAVAEKASAAPGGKXXXXXXXXXXXXXXXXXXXXXXATVAELATLRKELDSAVKTIKELRTDILALQGHNDQLAAELRELRRRPDPAAVAAAXXXXXXXXXKDAQEREARAKVAKEQEVLAAKMAEARAALSQGFPSMKEVTKAKTVYADETQEVRAAADAVAEATAASKQARESKTXXXXXXXXXXPKRPXXXXXXXXXXTAPAPQSSDPVKAAMDDVESKLAGKAEAEAEKLSAXXXXAARAVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAQQSQEPKAEITXXXXXXXXXXXXXXXXXXXEEPAAPAKXXXAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKQALGLPDGWVPSEKALDLMSVAQLKGFLKEEGLPQTGKKDDLKATIMEYFAKNANK 2419
            MPSKAVPVAVVAFALCLGTHAFLSPQSCTAQRRASAAPQLSMSSGSGNGGDDMAKLRRDLAVSVAAASLFVLPAIATANEFPSGAGSSFAQEQKLLQKLLKEDTEVKAETVPDVPAAPQVEVPPWMALPEVQPVGGGLKLREPVFQKFDFTKALEGMDFKLGAPDYGKYKFNINAAAPTRWEDRPPVNVPPQLQSVLTNLAQKRAELQAAWERAPPLPADAAAALQALDDAATKALKPYLKDDVPPGFALGLLASAGVAAAGLNSAAANAGAASYKGSYGGSSXXXXXXXXXAAVAEKASAAPGGKXXXXXXXXXXXXXXXXXXXXXXATVAELATLRKELDSAVKTIKELRTDILALQGHNDQLAAELRELRRRPDPAAVAAAXXXXXXXXXKDAQEREARAKVAKEQEVLAAKMAEARAALSQGFPSMKEVTKAKTVYADETQEVRAAADAVAEATAASKQARESKTXXXXXXXXXXPKRPXXXXXXXXXXTAPAPQSSDPVKAAMDDVESKLAGKAEAEAEKLSAXXXXAARAVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAQQSQEPKAEITXXXXXXXXXXXXXXXXXXXEEPAAPAKXXXAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKQALGLPDGWVPSEKALDLMSVAQLKGFLKEEGLPQTGKKDDLKATIMEYFAKNANK
Sbjct:    1 MPSKAVPVAVVAFALCLGTHAFLSPQSCTAQRRASAAPQLSMSSGSGNGGDDMAKLRRDLAVSVAAASLFVLPAIATANEFPSGAGSSFAQEQKLLQKLLKEDTEVKAETVPDVPAAPQVEVPPWMALPEVQPVGGGLKLREPVFQKFDFTKALEGMDFKLGAPDYGKYKFNINAAAPTRWEDRPPVNVPPQLQSVLTNLAQKRAELQAAWERAPPLPADAAAALQALDDAATKALKPYLKDDVPPGFALGLLASAGVAAAGLNSAAANAGAASYKGSYGGSSXXXXXXXXXAAVAEKASAAPGGKXXXXXXXXXXXXXXXXXXXXXXATVAELATLRKELDSAVKTIKELRTDILALQGHNDQLAAELRELRRRPDPAAVAAAXXXXXXXXXKDAQEREARAKVAKEQEVLAAKMAEARAALSQGFPSMKEVTKAKTVYADETQEVRAAADAVAEATAASKQARESKTXXXXXXXXXXPKRPXXXXXXXXXXTAPAPQSSDPVKAAMDDVESKLAGKAEAEAEKLSAXXXXAARAVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAQQSQEPKAEITXXXXXXXXXXXXXXXXXXXEEPAAPAKXXXAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKQALGLPDGWVPSEKALDLMSVAQLKGFLKEEGLPQTGKKDDLKATIMEYFAKNANK 786          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|351120 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YJ18_9STRA0.000e+099.29WD40-repeat-containing domain protein n=1 Tax=Trib... [more]
A0A1V9ZH75_9STRA6.840e-7237.01Uncharacterized protein n=1 Tax=Thraustotheca clav... [more]
A0A1V9Z0D3_9STRA2.100e-7136.16Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
T0QLI3_SAPDV2.610e-7136.14Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
A0A6G0WMI1_9STRA8.250e-7136.31Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A485KBC9_9STRA2.070e-6835.00Aste57867_3431 protein n=1 Tax=Aphanomyces stellat... [more]
W4GBB9_9STRA4.790e-6532.96Uncharacterized protein n=4 Tax=Aphanomyces astaci... [more]
A0A024GQH6_9STRA1.300e-6231.78Uncharacterized protein n=2 Tax=Albugo candida Tax... [more]
A0A024TP79_9STRA6.130e-6033.07Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
A0A7S2P0E3_9STRA1.640e-5745.69Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]

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BLAST of jgi.p|Trimin1|351120 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A835YNR0_9STRA0.000e+0100.00SAP domain-containing protein n=1 Tax=Tribonema mi... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_81contigContig_81:147958..152149 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|351120|estExt_Genemark1.C_Ctg_810022
BRITEko00000,ko00001,ko03009,ko03029,ko03036,ko04131
KEGG Pathwayko03008,ko04137,ko04140,ko04934,map03008,map04137,map04140,map04934
KEGG koko:K14558,ko:K14963,ko:K17985
GOsGO:0000003,GO:0001101,GO:0003002,GO:0003006,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0006355,GO:0007154,GO:0007165,GO:0007275,GO:0007389,GO:0008150,GO:0009653,GO:0009719,GO:0009725,GO:0009733,GO:0009753,GO:0009755,GO:0009790,GO:0009791,GO:0009793,GO:0009867,GO:0009888,GO:0009889,GO:0009890,GO:0009892,GO:0009933,GO:0009987,GO:0010014,GO:0010016,GO:0010033,GO:0010051,GO:0010072,GO:0010154,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0019219,GO:0019222,GO:0022414,GO:0023052,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032501,GO:0032502,GO:0032870,GO:0042221,GO:0042802,GO:0042803,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464,GO:0045892,GO:0045934,GO:0046983,GO:0048316,GO:0048367,GO:0048507,GO:0048508,GO:0048519,GO:0048523,GO:0048532,GO:0048608,GO:0048731,GO:0048856,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0051716,GO:0060255,GO:0061458,GO:0065007,GO:0070887,GO:0071229,GO:0071310,GO:0071395,GO:0071495,GO:0080090,GO:0090421,GO:1901700,GO:1901701,GO:1902679,GO:1903506,GO:1903507,GO:2000112,GO:2000113,GO:2001141
Preferred nameTPL
DescriptionWD repeat-containing protein
COG categoryB
Max annot lvl2759|Eukaryota
EggNOG OGsKOG0266@1|root,KOG0266@2759|Eukaryota
Evalue1.6e-73
Seed ortholog112098.XP_008607748.1
Hectar predicted targeting categoryother localisation
TranscriptId351442
TrackFilteredModels1
ProteinId351120
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|351120gene_9739Tribonema minus UTEX_B_3156 geneContig_81 147958..152149 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|351120Trimin1|351120|estExt_Genemark1.C_Ctg_810022Tribonema minus UTEX_B_3156 polypeptideContig_81 147958..151716 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_9739_1exon_9739_1Tribonema minus UTEX_B_3156 exonContig_81 147958..148070 +
exon_9739_2exon_9739_2Tribonema minus UTEX_B_3156 exonContig_81 148163..148859 +
exon_9739_3exon_9739_3Tribonema minus UTEX_B_3156 exonContig_81 149253..149456 +
exon_9739_4exon_9739_4Tribonema minus UTEX_B_3156 exonContig_81 149963..150219 +
exon_9739_5exon_9739_5Tribonema minus UTEX_B_3156 exonContig_81 151249..151503 +
exon_9739_6exon_9739_6Tribonema minus UTEX_B_3156 exonContig_81 151548..152149 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_9739CDS_9739Tribonema minus UTEX_B_3156 CDSContig_81 147958..148070 +


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR3_9739UTR3_9739Tribonema minus UTEX_B_3156 three_prime_UTRContig_81 151717..152149 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_9739 ID=mRNA_9739|Name=jgi.p|Trimin1|351120|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2128bp|location=Sequence derived from alignment at Contig_81:147958..152149+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGATACTGATCCCACACTCGTTTCGCGCGTGTCTGCAGTACGATGCAGA
GTATGTGGAGCTGGAGACAGATCAGCCCTACTGCACTATCGCCGTGGTCT
TCAGCCCCGATGGCACGACCTTCGCGAGTACACATGGCGATCACACCGTG
AAAGTCACGGATTTCGCGACGGCAAAGCTGCTGCGCTGCTTCGCGGGGCA
CCCACGCACGCCTTGGACCGTCAAGTACCACCCCACCAACAGCAACTTGC
TAGCCAGCGGCTGCCTGGGAGGGGAGCTGAGGGTCTGGGACGTGCAGCAG
GGCACCTGCCTCAAGGTGTACAGCTTCGGGGACTCGGTGATCAGCTTGAG
CTTCCACCCGACCAGCAGCGTGCTGGCGATTTCCAGCGGGCGCCGCGTGC
ACACGTGGGCGTACGACAAGCAGCAGCTCCCGCACTGCGAGATGCAGAAC
GACCGCAACGTGCGCTGCGTGTGCTTCAATCCCAAGGACGGCGGGAGCCT
GCTCATCGCCGTCGCGAACGGCATGCAGGCGGGCGGCGGCGCCGGCAGCA
CCGCCGCCAGCAAGACCCCCACTTTCACCCTCACGATGTGGGACTTTGAT
CTCAGCGCCGCTCTGTCGGGAACGGTCCCGGCGCTGATGCGCCAGCGCGT
CGTCCTCTCGCGCGCGCTGCTGTACAACGACAGCGGCGTCGACCTGTCCG
CGTGCGGGCGGTTCCTCTGCGGCTGCGCCGAGTTCTGGGTGGAAGAGCGC
CCGCAGCAGCAGGATCAGCATGCTGAAGCTGCCGCCGCCACTGCCGCCGC
TGCTGCTGCCGCGTGGGAAGACAAGCTTGGTGTCAGGCGTGTGCGCGATC
TGATAGCACGGGGGTCGACGGTGGGGCTGAAACGTCCCCTGTCGCTGCAA
GTCAGTACCTGGGACCAGGGGGGGGCGAGGGAGGATGCGGGTCATGAGGC
GTGTCCCACTAACACTCCACGCGCGCTCACGCCGGACTCTCCGTGGGGCA
TTGACTGCCTGCAGGCCGACACCACCCCCGAGCGCCCCGGCCGCTACGTC
CCGCACCTGGTCCTGCTGCAACTGCGGTGGGGGCGGGGTCCCGACTGCGG
TCACCGGTGGTGCGAGGGGAGCGCGGGGTGCGGCGGGGAGGGGAGCGTGC
GGCTGCTGCAGGCCTCAACGCTCAGCTTCAACGCGCTGGGCATCACCAGC
ATCAAGTTCAGCCCGCTGGCGCGGTACATGCTGCTGGGTCGCGGGGTGCG
CGACGTGGCCTCGGAGGACATCGAGGACGATCAGGAGCTCATGCCGGCGA
CGTGCATCTACCGCTGCAAGGACCTCACCATGGTCAACATGCTCAACACG
GAGAGCGACGACGTCAACTGCGCGCGCTTCCACCCCACCCCCGGCATGGG
CTTCGCGTACGGGGCACGCCAGGGGGGTGTGCGCCTCATGCGCTGCGCCC
CCGCCCCTCCCGCCCCCGGCGCCGTGGCCACCGGCCTCGTGTCCGGGACG
CTGCTGCAGCCGAGGCCCATTCCCTGCCGGGGGGAGGGGAGGGGGGGCGA
AGCTGGCGGCGGCTGCGGCGGCGCGGGCGGCGGCGCCGGCGGCGGCGTCT
GGGGATTTGCGCCCACGCCCATGCCTACTGTCACAGCAGCAGCGGCACCT
GCAGCGCGGGTGGCGGCAGCGGCGATGCCTGCGGGCGGCGGCTGAAGCAG
CGGCGCGGCGGCGGTGTGGAGGGGGATGCGCCTGCGGCAGCGTGTGCACT
CGATGAGCACTGAGGCAGGGGTAGGTATTGGCCGTCAAGTGTCTGCAACT
GCTGAGCGCTGACACAAGAGCAGACGCCGGCCGCGCAGTGGGCAGTGCTG
CGCGTCTTGTGTGCTGGCAGCGCCATCCTTCCAAGTATACGTTTGTCATG
TTGTGAATACTGTAGTATGCTACTTTATGTGTGTAAGCGATGGTGCGCGG
CGCACAGTGCCACATGTGGGATTGGCCGCCGACACCCGAGTAGTCTGCCA
ATGGCGCATGGTGTATGAGATCATACGCTCGTCGCGCCGTAGCAATAATG
TTAGCCACCGCCATGGCGAGTGTGCGTAATGTGTTGGCCACGACTGGACT
GGTGCACCGCCAGTGAATAGACCACGTA
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protein sequence of jgi.p|Trimin1|351120

>Trimin1|351120|estExt_Genemark1.C_Ctg_810022 ID=Trimin1|351120|estExt_Genemark1.C_Ctg_810022|Name=jgi.p|Trimin1|351120|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=565bp
MILIPHSFRACLQYDAEYVELETDQPYCTIAVVFSPDGTTFASTHGDHTV
KVTDFATAKLLRCFAGHPRTPWTVKYHPTNSNLLASGCLGGELRVWDVQQ
GTCLKVYSFGDSVISLSFHPTSSVLAISSGRRVHTWAYDKQQLPHCEMQN
DRNVRCVCFNPKDGGSLLIAVANGMQAGGGAGSTAASKTPTFTLTMWDFD
LSAALSGTVPALMRQRVVLSRALLYNDSGVDLSACGRFLCGCAEFWVEER
PQQQDQHAEAAAATAAAAAAAWEDKLGVRRVRDLIARGSTVGLKRPLSLQ
VSTWDQGGAREDAGHEACPTNTPRALTPDSPWGIDCLQADTTPERPGRYV
PHLVLLQLRWGRGPDCGHRWCEGSAGCGGEGSVRLLQASTLSFNALGITS
IKFSPLARYMLLGRGVRDVASEDIEDDQELMPATCIYRCKDLTMVNMLNT
ESDDVNCARFHPTPGMGFAYGARQGGVRLMRCAPAPPAPGAVATGLVSGT
LLQPRPIPCRGEGRGGEAGGGCGGAGGGAGGGVWGFAPTPMPTVTAAAAP
AARVAAAAMPAGGG*
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mRNA from alignment at Contig_81:147958..152149+

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_9739 ID=mRNA_9739|Name=jgi.p|Trimin1|351120|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=4192bp|location=Sequence derived from alignment at Contig_81:147958..152149+ (Tribonema minus UTEX_B_3156 )
ATGATACTGATCCCACACTCGTTTCGCGCGTGTCTGCAGTACGATGCAGA GTATGTGGAGCTGGAGACAGATCAGCCCTACTGCACTATCGCCGTGGTCT TCAGCCCCGATGGGTAAGAATCCTCTTTGTCAAGCATGGCCTCATGTTCA CAATGTTGCCGTGCTCTCCAACTCACACACGCCAGTATCTATTCTGCTCG CGCAGCACGACCTTCGCGAGTACACATGGCGATCACACCGTGAAAGTCAC GGATTTCGCGACGGCAAAGCTGCTGCGCTGCTTCGCGGGGCACCCACGCA CGCCTTGGACCGTCAAGTACCACCCCACCAACAGCAACTTGCTAGCCAGC GGCTGCCTGGGAGGGGAGCTGAGGGTCTGGGACGTGCAGCAGGGCACCTG CCTCAAGGTGTACAGCTTCGGGGACTCGGTGATCAGCTTGAGCTTCCACC CGACCAGCAGCGTGCTGGCGATTTCCAGCGGGCGCCGCGTGCACACGTGG GCGTACGACAAGCAGCAGCTCCCGCACTGCGAGATGCAGAACGACCGCAA CGTGCGCTGCGTGTGCTTCAATCCCAAGGACGGCGGGAGCCTGCTCATCG CCGTCGCGAACGGCATGCAGGCGGGCGGCGGCGCCGGCAGCACCGCCGCC AGCAAGACCCCCACTTTCACCCTCACGATGTGGGACTTTGATCTCAGCGC CGCTCTGTCGGGAACGGTCCCGGCGCTGATGCGCCAGCGCGTCGTCCTCT CGCGCGCGCTGCTGTACAACGACAGCGGCGTCGACCTGTCCGCGTGCGGG CGGTTCCTCTGCGGCTGCGCCGAGTTCTGGGTGGAAGAGCGCCCGCAGCA GCAGGATCAGCATGCTGAAGCTGCCGCCGCCACTGCCGCCGCTGCTGCTG CCGTCTGTTCTGCTGGACCGCCGCCGCCGCGGCAACCTTGTGCCGGCACC GCACACAGCCCACCGCATCAGACCACCGCTGCAGCACACGCGTTGAGCAC TGCTGCTGCGTCCGGCGACGCTCCCACTGCAGCCACTGCTGCTGCTACCC CTGCTCCTGCAACTGCGGCTGCTGCTGCTGCTGGTTGCACTGAGGGTATC GGCGCAGCTGCTGCGATGAGAGCCGCAAAGAGACTGCACAGCTGGCCAAA GCGAGCACGCTCCGCCGGCGCTCACAGCAGACCAGCAGCAGCAGCAGCAG CAGCGGCGGCGGCGGCGGCGGCAGCGGCGGCAGAAGCAGCGCTGCCGCCC TGCCCCTGCACCCCCCCCCGCACCATCTCCTCTTGCGCTGCCGAGGCGTG GGAAGACAAGCTTGGTGTCAGGCGTGTGCGCGATCTGATAGCACGGGGGT CGACGGTGGGGCTGAAACGTCCCCTGTCGCTGCAAGTCAGTACCTGGGAC CAGGGGGGGGCGAGGGAGGATGCGGGTCATGAGGCGTGTCCCACTAACAC TCCACGCGCGCTCACGCCGGACTCTCCGTGGGGCATTGACTGCCTGCAGG TGAGGCTGTCGCTTGAGCGCATGAGTTTTGCTGTCATGGTGCCGGTGCGC TTGCAGCGCTGCGTGCGCATGGCTGTCTGGAGCTGTCGCGGTTCACGCTG TGCTGTGCGGTGCGTGCAGGCAGTGACTAGGTTGGGATCAGAACCAGGGG CAGGGTTCCACAGAGGACCCCATGATGCTGTGTGCAGGCATTGATTAGAG ATGCCAAGTGTACACGGAACATGGTGCTCCCTTGCGCTGTCGTTCCATGT ATACGTGGCTTTGCAGCAACTCGTGATCCTGCAAGTGTCGTAGCTGTGGA AGCGGCAGTGCCATTCAGCTCGTCTGCCGGAGCAGGTTCAGCATGCTCAC AACTGCTAGCCGGTTTCGTAACTGTCGCTTGCCGGTTGCCGATGTTTGTA GCTGTAGCTTGTCGATTGCAGCGCTCATATCGCGCGTCACACACACACAC ACACCCCAATGTTTGCGTTTATGGCTGAACCGCCGCGACGCGCCCTTCCA CACAGGCCGACACCACCCCCGAGCGCCCCGGCCGCTACGTCCCGCACCTG GTCCTGCTGCAACTGCGGTGGGGGCGGGGTCCCGACTGCGGTCACCGGTG GTGCGAGGGGAGCGCGGGGTGCGGCGGGGAGGGGAGCGTGCGGCTGCTGC AGGCCTCAACGCTCAGCTTCAACGCGCTGGGCATCACCAGCATCAAGTTC AGCCCGCTGGCGCGGTACATGCTGCTGGGTCGCGGGGTGCGCGACGTGGC CTCGGAGGACATGTGAGTTGTCGTTGTTAGCAGCCGCGCTCAGTTTCATA TACGAAATGTAACACTCACACAAGACACACACACCACAGTGCTCAGGGGT ATGTATGCGGCTGGCGCGCGGGGTGCGCGACGTGACTTCTGTGTGCAAGC TTTGTATTATGAGGTGTCACAGTGTGCACAGGGGCATCGTGCTGAGGCGG GCGCGGCGCGTCGGAGGACATGCAAGTTACGCAGCAGCAGCAGTGCTCAG TTTTATATATATGTTGAGCGCCAATATTGAAGATTCCAACACGCCTTGAT GCGAATGCACCCCTGGAGGTTCGTTTGAGCTCAGCACAGCGCCCTCAGCT ATGCAACCTCACAGTGCTCACGGGACACACGATGATGAGTAATATTGCCC AAGTCAGCAGGCCGCTTGCCTGACGCCAATCACACACGGCCTGTGGTGTG CGCTTCCTCACCTGTGACTCTCCCTTGCTCACAGTGCGGCGACGCGCGCG CAGTGAGGACCAGCAGCAGCAGGCCTCTTGCGTTCTGATTCCTCACCTGT GACTCTCTCATGCTTGCCCCTTTTCCCCCTCAATTGGCACCATACGTACA TACCATGCAGCGAGGATGATCAGAAGCAGGCCTCTTGCCCTGTGATTCCT CACTCAGAGGCTCTCCCATGCTTGCCCCTTTTCCCCCCTTAACTGGAACC GTACATACATGAAAATATGGGCGCCATAGAGGCAGTTCTGGCAGCGTCAA TTTCCACAAAGGTTATTGTGCTCGTCCATGCCTTGCACATCGCTGAACTC GGCTCAAGTTGCAGGGCGCTCATGGAACGTCGCCAATTGCGCCCCCTAAC CCTAACTCAACCCTAACCCTAACCCTAAGATCTCAGTGAAGCCACCTCTG CGCACCGACGCTCGCCTCAACCCTAGACATCACCCCACCCTCCACACACC CTGCACGCCATGATTCCTCACCAATGGCTCTCCCATGCCTGCCCCCCTTC TCCCTCTCACTCGGCGCCATACATACATGCCCACCATGCAGCGAGGACGA TCAGGAGCTCATGCCGGCGACGTGCATCTACCGCTGCAAGGACCTCACCA TGGTCAACATGCTCAACACGGAGAGCGACGACGTCAACTGCGCGCGCTTC CACCCCACCCCCGGCATGGGCTTCGCGTACGGGGCACGCCAGGGGGGTGT GCGCCTCATGCGCTGCGCCCCCGCCCCTCCCGCCCCCGGCGCCGTGGCCA CCGGCCTCGTGTCCGGGACGCTGCTGCAGCCGAGGCCCATTCCCTGGTGA GGGGGAGCCCCTGGGTTTGTGTGTGTGTGTGTGTGCACAGCCGGGGGGAG GGGAGGGGGGGCGAAGCTGGCGGCGGCTGCGGCGGCGCGGGCGGCGGCGC CGGCGGCGGCGTCTGGGGATTTGCGCCCACGCCCATGCCTACTGTCACAG CAGCAGCGGCACCTGCAGCGCGGGTGGCGGCAGCGGCGATGCCTGCGGGC GGCGGCTGAAGCAGCGGCGCGGCGGCGGTGTGGAGGGGGATGCGCCTGCG GCAGCGTGTGCACTCGATGAGCACTGAGGCAGGGGTAGGTATTGGCCGTC AAGTGTCTGCAACTGCTGAGCGCTGACACAAGAGCAGACGCCGGCCGCGC AGTGGGCAGTGCTGCGCGTCTTGTGTGCTGGCAGCGCCATCCTTCCAAGT ATACGTTTGTCATGTTGTGAATACTGTAGTATGCTACTTTATGTGTGTAA GCGATGGTGCGCGGCGCACAGTGCCACATGTGGGATTGGCCGCCGACACC CGAGTAGTCTGCCAATGGCGCATGGTGTATGAGATCATACGCTCGTCGCG CCGTAGCAATAATGTTAGCCACCGCCATGGCGAGTGTGCGTAATGTGTTG GCCACGACTGGACTGGTGCACCGCCAGTGAATAGACCACGTA
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Coding sequence (CDS) from alignment at Contig_81:147958..152149+

>mRNA_9739 ID=mRNA_9739|Name=jgi.p|Trimin1|351120|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1695bp|location=Sequence derived from alignment at Contig_81:147958..152149+ (Tribonema minus UTEX_B_3156 )
ATGATACTGATCCCACACTCGTTTCGCGCGTGTCTGCAGTACGATGCAGA
GTATGTGGAGCTGGAGACAGATCAGCCCTACTGCACTATCGCCGTGGTCT
TCAGCCCCGATGGCACGACCTTCGCGAGTACACATGGCGATCACACCGTG
AAAGTCACGGATTTCGCGACGGCAAAGCTGCTGCGCTGCTTCGCGGGGCA
CCCACGCACGCCTTGGACCGTCAAGTACCACCCCACCAACAGCAACTTGC
TAGCCAGCGGCTGCCTGGGAGGGGAGCTGAGGGTCTGGGACGTGCAGCAG
GGCACCTGCCTCAAGGTGTACAGCTTCGGGGACTCGGTGATCAGCTTGAG
CTTCCACCCGACCAGCAGCGTGCTGGCGATTTCCAGCGGGCGCCGCGTGC
ACACGTGGGCGTACGACAAGCAGCAGCTCCCGCACTGCGAGATGCAGAAC
GACCGCAACGTGCGCTGCGTGTGCTTCAATCCCAAGGACGGCGGGAGCCT
GCTCATCGCCGTCGCGAACGGCATGCAGGCGGGCGGCGGCGCCGGCAGCA
CCGCCGCCAGCAAGACCCCCACTTTCACCCTCACGATGTGGGACTTTGAT
CTCAGCGCCGCTCTGTCGGGAACGGTCCCGGCGCTGATGCGCCAGCGCGT
CGTCCTCTCGCGCGCGCTGCTGTACAACGACAGCGGCGTCGACCTGTCCG
CGTGCGGGCGGTTCCTCTGCGGCTGCGCCGAGTTCTGGGTGGAAGAGCGC
CCGCAGCAGCAGGATCAGCATGCTGAAGCTGCCGCCGCCACTGCCGCCGC
TGCTGCTGCCGCGTGGGAAGACAAGCTTGGTGTCAGGCGTGTGCGCGATC
TGATAGCACGGGGGTCGACGGTGGGGCTGAAACGTCCCCTGTCGCTGCAA
GTCAGTACCTGGGACCAGGGGGGGGCGAGGGAGGATGCGGGTCATGAGGC
GTGTCCCACTAACACTCCACGCGCGCTCACGCCGGACTCTCCGTGGGGCA
TTGACTGCCTGCAGGCCGACACCACCCCCGAGCGCCCCGGCCGCTACGTC
CCGCACCTGGTCCTGCTGCAACTGCGGTGGGGGCGGGGTCCCGACTGCGG
TCACCGGTGGTGCGAGGGGAGCGCGGGGTGCGGCGGGGAGGGGAGCGTGC
GGCTGCTGCAGGCCTCAACGCTCAGCTTCAACGCGCTGGGCATCACCAGC
ATCAAGTTCAGCCCGCTGGCGCGGTACATGCTGCTGGGTCGCGGGGTGCG
CGACGTGGCCTCGGAGGACATCGAGGACGATCAGGAGCTCATGCCGGCGA
CGTGCATCTACCGCTGCAAGGACCTCACCATGGTCAACATGCTCAACACG
GAGAGCGACGACGTCAACTGCGCGCGCTTCCACCCCACCCCCGGCATGGG
CTTCGCGTACGGGGCACGCCAGGGGGGTGTGCGCCTCATGCGCTGCGCCC
CCGCCCCTCCCGCCCCCGGCGCCGTGGCCACCGGCCTCGTGTCCGGGACG
CTGCTGCAGCCGAGGCCCATTCCCTGCCGGGGGGAGGGGAGGGGGGGCGA
AGCTGGCGGCGGCTGCGGCGGCGCGGGCGGCGGCGCCGGCGGCGGCGTCT
GGGGATTTGCGCCCACGCCCATGCCTACTGTCACAGCAGCAGCGGCACCT
GCAGCGCGGGTGGCGGCAGCGGCGATGCCTGCGGGCGGCGGCTGA
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