mRNA_9738 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|171333
Unique NamemRNA_9738
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
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BLAST of jgi.p|Trimin1|171333 vs. uniprot
Match: A0A835YIR4_9STRA (CTR-like PK n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIR4_9STRA)

HSP 1 Score: 578 bits (1491), Expect = 6.330e-209
Identity = 282/282 (100.00%), Postives = 282/282 (100.00%), Query Frame = 1 
Query:    1 MQAVAYSDLTVGEKIGGGGVGLVHRGWYNRKPVALKVLFDARMNEELIREFTEEVNVLAQLRHPNIVRVLGGSTSPPHLFFLMELCESSVYEELHIKRRRYGMQELLKIALDTVYAMQYLHSQSPPVVHRDLKSHNLLIGADGNTKLCDFGLVCTSSTTAGTPCYMAPELLQNRPFTKSVDVYAFGILLWELFSQDLPFRGLEVGDVKEVVTAGQRPTVPRGDTPRQIRDMMEQCWAQVPMERPTFGQCVPVLQELVQEHSSRSHVDDLDDFGGDSLDCLLK 846
            MQAVAYSDLTVGEKIGGGGVGLVHRGWYNRKPVALKVLFDARMNEELIREFTEEVNVLAQLRHPNIVRVLGGSTSPPHLFFLMELCESSVYEELHIKRRRYGMQELLKIALDTVYAMQYLHSQSPPVVHRDLKSHNLLIGADGNTKLCDFGLVCTSSTTAGTPCYMAPELLQNRPFTKSVDVYAFGILLWELFSQDLPFRGLEVGDVKEVVTAGQRPTVPRGDTPRQIRDMMEQCWAQVPMERPTFGQCVPVLQELVQEHSSRSHVDDLDDFGGDSLDCLLK
Sbjct:    1 MQAVAYSDLTVGEKIGGGGVGLVHRGWYNRKPVALKVLFDARMNEELIREFTEEVNVLAQLRHPNIVRVLGGSTSPPHLFFLMELCESSVYEELHIKRRRYGMQELLKIALDTVYAMQYLHSQSPPVVHRDLKSHNLLIGADGNTKLCDFGLVCTSSTTAGTPCYMAPELLQNRPFTKSVDVYAFGILLWELFSQDLPFRGLEVGDVKEVVTAGQRPTVPRGDTPRQIRDMMEQCWAQVPMERPTFGQCVPVLQELVQEHSSRSHVDDLDDFGGDSLDCLLK 282
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BLAST of jgi.p|Trimin1|171333 vs. uniprot
Match: D7FVC7_ECTSI (CTR-like PK n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVC7_ECTSI)

HSP 1 Score: 310 bits (793), Expect = 2.620e-102
Identity = 148/282 (52.48%), Postives = 208/282 (73.76%), Query Frame = 1 
Query:    4 QAVAYSDLTVGEKIGGGGVGLVHRGWYNRKPVALKVLFDARMNEELIREFTEEVNVLAQLRHPNIVRVLGGSTSPPHLFFLMELCESSVYEELHIKRRRYGMQELLKIALDTVYAMQYLHSQSPPVVHRDLKSHNLLI-GADGNTKLCDFGLVCTSSTTAGTPCYMAPELLQNRPFTKSVDVYAFGILLWELFSQDLPFRGLEVGDVKEVVTAGQRPTVPRGDTPRQIRDMMEQCWAQVPMERPTFGQCVPVLQELVQEHSSRSHVDDLDDFGGDSLDCLLK 846
            + + + ++ +GE++GGG VGLVHRG Y  + VA+K LFD R++E L REF +E+ VL+QL HPNIVR  G S  PP+LFF+MELC+ S+++ LH  RR  G++  + +ALD   AM+YLHS++PP++HRDLKS NLL+ G +G  KLCDFGLV T+ T AGT  YM+P+LL  +PF KSVDVYAFG+LLWE+FS+++PF G EV D++E V +G RPTVPRGD PR+I  +M +CW++ P +RP FG+   +LQEL+   ++ + ++  +  G D LD LL+
Sbjct:   26 KTIKFDEILLGERLGGGSVGLVHRGQYKGENVAVKTLFDRRIDEGLKREFQDELLVLSQLSHPNIVRFYGASMIPPNLFFVMELCQRSLFDLLHHCRRTIGVRRRIGMALDVSRAMEYLHSRNPPIIHRDLKSLNLLLAGTEGPVKLCDFGLVRTTVTAAGTVAYMSPQLLLGQPFNKSVDVYAFGVLLWEIFSREIPFNGFEVADIREAVVSGGRPTVPRGDCPREISSLMCRCWSENPQQRPAFGEIEEILQELLLSTAAATELEGTETTG-DCLDDLLR 306
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BLAST of jgi.p|Trimin1|171333 vs. uniprot
Match: A0A7S2WD89_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WD89_9STRA)

HSP 1 Score: 303 bits (776), Expect = 3.220e-99
Identity = 144/281 (51.25%), Postives = 207/281 (73.67%), Query Frame = 1 
Query:   10 VAYSDLTVGEKIGGGGVGLVHRGWYNRKPVALKVLFDARMNEELIREFTEEVNVLAQLRHPNIVRVLGGSTSPPHLFFLMELCESSVYEELHIKRRRYGMQELLKIALDTVYAMQYLHSQSPPVVHRDLKSHNLLIGADGNTKLCDFGLVCTSSTTAGTPCYMAPELLQNRPFTKSVDVYAFGILLWELFSQDLPFRGLEVGDVKEVVTAGQRPTVPRGDTPRQIRDMMEQCWAQVPMERPTFGQCVPVLQELVQEHSSRSHVDDLDDFGG--DSLDCLLK 846
            + +S++ +G+KIGGGGVG+++ G +  +PVALK LFD +++E+L++E+ +E+ V++QL HPN+V  LG S SPP+L F+MELC+ S+Y+ LH++R ++   E ++IALD   AM+YLHS  P ++HRDLKSHNLL+   G  KLCDFGLV T  T AGTP YMAPELL  + F KSVDVY+FG+LL E+FSQ++PF   ++ D++  V  G RP +P  DTP +IRDM+  CW Q P +RP FG+ V  L++L+++   RS++++LDD GG  D+LD LL 
Sbjct:   60 IDFSEIELGKKIGGGGVGVIYSGHWRDRPVALKTLFDPKVDEDLMQEYMDELLVMSQLDHPNVVSFLGASMSPPNLCFVMELCDQSLYDMLHVQRLQFTTYECVQIALDVAMAMEYLHSLQPCIIHRDLKSHNLLVQR-GVVKLCDFGLVRTRVTQAGTPAYMAPELLAGQAFNKSVDVYSFGVLLCEIFSQEIPFSSYDLDDIRRCVARGDRPRIPTIDTPPRIRDMISDCWQQDPSDRPIFGRLVRDLEDLLRDLPQRSNLEELDDVGGSGDALDDLLS 339
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BLAST of jgi.p|Trimin1|171333 vs. uniprot
Match: A0A1V9ZDZ5_9STRA (Serine/threonine protein kinase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZDZ5_9STRA)

HSP 1 Score: 288 bits (738), Expect = 3.040e-94
Identity = 136/283 (48.06%), Postives = 193/283 (68.20%), Query Frame = 1 
Query:    7 AVAYSDLTVGEKIGGGGVGLVHRGWYNRKPVALKVLFDARMNEELIREFTEEVNVLAQLRHPNIVRVLGGSTSPPHLFFLMELCESSVYEELHIKRRRYGMQELLKIALDTVYAMQYLHSQSPPVVHRDLKSHNLLIGADGNTKLCDFGLVCTSSTTAGTPCYMAPELLQNRPFTKSVDVYAFGILLWELFSQDLPFRGLEVGDVKEVVTAGQRPTVPRGDTPRQIRDMMEQCWAQVPMERPTFGQCVPVLQEL---VQEHSSRSHVDDLDDFGGDSLDCLLK 846
            ++A+ +LTVG+KIGGGGVG+V+ G Y  +PVALK LFD R+++ L  EF +E+ V+++L+HP++V  +G     P+L F+MELC  S+++ LH      G+ EL+ +A     AM+YLH+QSP ++HRDLKS N+L+   G  KLCDFGLVCT  TTAGTP YM PELL  RPF+K+VDVY FG+LLWELFS+D+PFRG +V D++  V AG RP +P  D P++ ++++ QCW   P  RP+F      L+++    + H +  HV        D+LDCL+ 
Sbjct:    8 SIAFDELTVGDKIGGGGVGIVYSGTYRGRPVALKTLFDPRVDKALKDEFMDELLVMSKLKHPHVVNFIGACMEAPNLCFVMELCTMSLFDRLHRTNDALGVSELVDMATGVADAMRYLHAQSPAIIHRDLKSQNVLLDHRGVVKLCDFGLVCTKETTAGTPAYMPPELLAGRPFSKAVDVYMFGVLLWELFSRDVPFRGYDVDDIQRKVLAGDRPAIPTLDCPQKCQELIRQCWDNEPSRRPSFAAVYDALRQIDCATEFHRAMDHV-----VEEDALDCLVN 285
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BLAST of jgi.p|Trimin1|171333 vs. uniprot
Match: A0A067CQ82_SAPPC (TKL protein kinase n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CQ82_SAPPC)

HSP 1 Score: 283 bits (723), Expect = 5.710e-92
Identity = 134/284 (47.18%), Postives = 191/284 (67.25%), Query Frame = 1 
Query:    4 QAVAYSDLTVGEKIGGGGVGLVHRGWYNRKPVALKVLFDARMNEELIREFTEEVNVLAQLRHPNIVRVLGGSTSPPHLFFLMELCESSVYEELHIKRRRYGMQELLKIALDTVYAMQYLHSQSPPVVHRDLKSHNLLIGADGNTKLCDFGLVCTSSTTAGTPCYMAPELLQNRPFTKSVDVYAFGILLWELFSQDLPFRGLEVGDVKEVVTAGQRPTVPRGDTPRQIRDMMEQCWAQVPMERPTFGQCVPVLQEL---VQEHSSRSHVDDLDDFGGDSLDCLLK 846
            +++ + +L VGEKIGGGGVG+V+ G Y  KPVALK LFD R+++ L  E+ +E+ V+++L+HP+IV  +G     P+L F+MELC  S+++ LH       + EL+++A     AM YLH+QSP ++HRDLKS N+L+   G  KLCDFGLVCT  TTAGTP YM PELL  RPF+K+VDVY +G+LLWELF++D+PFRG +V D++  V AG RP +P  D P++ ++++  CW   P  RP+F      L+E+    + H +  HV        D+LDCL+K
Sbjct:    7 KSIRFDELHVGEKIGGGGVGIVYSGTYREKPVALKTLFDPRVDQALKDEYMDELLVMSKLQHPHIVHFIGACMEAPNLCFVMELCNMSLFDRLHRTNLALSVTELVEMATGVADAMMYLHAQSPAIIHRDLKSQNVLLDMHGVVKLCDFGLVCTKETTAGTPAYMPPELLAGRPFSKAVDVYMYGVLLWELFARDVPFRGYDVDDIQRKVLAGDRPQIPTLDCPQKCKELIRMCWDHDPARRPSFKTIHATLREIDCAAEFHRAMDHV-----MEEDALDCLVK 285
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BLAST of jgi.p|Trimin1|171333 vs. uniprot
Match: G4ZW68_PHYSP (Protein kinase domain-containing protein n=16 Tax=Phytophthora TaxID=4783 RepID=G4ZW68_PHYSP)

HSP 1 Score: 283 bits (723), Expect = 5.900e-92
Identity = 143/279 (51.25%), Postives = 189/279 (67.74%), Query Frame = 1 
Query:   10 VAYSDLTVGEKIGGGGVGLVHRGWYNRKPVALKVLFDARMNEELIREFTEEVNVLAQLRHPNIVRVLGGSTSPPHLFFLMELCESSVYEELHIKRRRYGMQELLKIALDTVYAMQYLHSQSPPVVHRDLKSHNLLIGADGNTKLCDFGLVCTSSTTAGTPCYMAPELLQNRPFTKSVDVYAFGILLWELFSQDLPFRGLEVGDVKEVVTAGQRPTVPRGDTPRQIRDMMEQCWAQVPMERPTFGQCVPVLQELVQEHSSRSHVDDLDDFGGDSLDCLLK 846
            + +S LTV E IGGGGV LVHRG Y ++ VALK LFD R++E L +EF +E+ V++ LRHPN+V ++G    PP+L  +MELC+ S++  LH        Q+L +IA D    M++LHS+ P V+HRDLKS N+L+ A G  KLCDFGLV T  TTAGTP YM PELL  +PF+KSVDV+ FGILLWE+FS+D+PFRG +V D+K  V  G+R  VP  D PR+ +++M+QCW   P  RPTF +    LQ +     +RS     + F GD+LDCLL 
Sbjct:   12 IPFSSLTVCETIGGGGVALVHRGIYRKQSVALKTLFDPRVDEALKQEFMDELLVMSILRHPNVVTLIGACLEPPNLCMVMELCDYSLHHLLHGTNTYLSPQQLTRIAGDVANGMRFLHSRKPAVIHRDLKSANVLLDAKGVAKLCDFGLVRTKFTTAGTPSYMPPELLSGQPFSKSVDVFMFGILLWEIFSRDIPFRGYDVSDIKWRVLGGERFRVPTVDCPRECQELMKQCWDGEPSSRPTFEEVCETLQSVT---FARSFEASQNVFEGDALDCLLN 287
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BLAST of jgi.p|Trimin1|171333 vs. uniprot
Match: A0A1W0A757_9STRA (Serine/threonine protein kinase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A757_9STRA)

HSP 1 Score: 283 bits (723), Expect = 6.100e-92
Identity = 133/279 (47.67%), Postives = 190/279 (68.10%), Query Frame = 1 
Query:    7 AVAYSDLTVGEKIGGGGVGLVHRGWYNRKPVALKVLFDARMNEELIREFTEEVNVLAQLRHPNIVRVLGGSTSPPHLFFLMELCESSVYEELHIKRRRYGMQELLKIALDTVYAMQYLHSQSPPVVHRDLKSHNLLIGADGNTKLCDFGLVCTSSTTAGTPCYMAPELLQNRPFTKSVDVYAFGILLWELFSQDLPFRGLEVGDVKEVVTAGQRPTVPRGDTPRQIRDMMEQCWAQVPMERPTFGQCVPVLQELVQEHSSRSHVDDLDDFGGDSLDCLL 843
            ++ + +LTVGEKIGGGGVG+V+ G Y  K VALK LFD R+++ L  E+ +E+ V+++L HP++V  +G     P+L F+MELC  S++E LH    +  + EL+ IA     AMQYLH+Q+P ++HRDLKS N+L+   G  KLCDFGLVCT  TTAGTP YM PELL  RPF+K+VD+Y +G+LLWE+F++D+PFRG +V D++  V AG RPT+P  D P + ++++ QCW Q P  RP+F      L ++  E      +D++     D+LDCL+
Sbjct:    9 SIRFEELTVGEKIGGGGVGIVYSGTYRGKEVALKTLFDPRVDQALKDEYMDELLVMSKLHHPHVVEFIGACMEAPNLCFVMELCRMSLFERLHRTNEQISLNELVAIATGVASAMQYLHAQTPVIIHRDLKSQNVLLDKKGIVKLCDFGLVCTKETTAGTPAYMPPELLAGRPFSKAVDIYMYGVLLWEIFARDVPFRGYDVDDIQRKVLAGHRPTIPTIDCPAKCQELIRQCWDQDPSGRPSFKSIHASLLQIDCEKEFHRAMDNV--MEEDALDCLV 285
[Close]
BLAST of jgi.p|Trimin1|171333 vs. uniprot
Match: A0A485KH26_9STRA (Aste57867_5585 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KH26_9STRA)

HSP 1 Score: 281 bits (720), Expect = 1.980e-91
Identity = 137/280 (48.93%), Postives = 188/280 (67.14%), Query Frame = 1 
Query:   10 VAYSDLTVGEKIGGGGVGLVHRGWYNRKPVALKVLFDARMNEELIREFTEEVNVLAQLRHPNIVRVLGGSTSPPHLFFLMELCESSVYEELHIKRRRYGMQELLKIALDTVYAMQYLHSQSPPVVHRDLKSHNLLIGADGNTKLCDFGLVCTSSTTAGTPCYMAPELLQNRPFTKSVDVYAFGILLWELFSQDLPFRGLEVGDVKEVVTAGQRPTVPRGDTPRQIRDMMEQCWAQVPMERPTFGQCVPVLQELVQEHSSRSHVDDLDDF-GGDSLDCLLK 846
            + ++DLTVGEKIGGGGVG+VHRG Y  +PVALK LFD R++  L +EF +E+ V+++L HPN+V  +G     P+L F+MELC  S+Y+ LH       +  L+ +A     AM YLH+ SP +VHRDLKS N+LI  DG+ KLCDFGLVCT   TAGTP YM PELL  +PF+K+VDVY FG+LLWE+F++D+PFRG ++ D++  V  G RP +P  D P   +D++ QCW+  P  RP+F     V++  +Q    R+ V  +D+    D+LD LL 
Sbjct:   16 IPFADLTVGEKIGGGGVGIVHRGKYRGRPVALKTLFDPRVDAALKQEFMDELLVMSKLEHPNVVEFIGACMEAPNLCFVMELCAMSLYDMLHGSNDPIRVPRLVSLATGVASAMNYLHTLSPAIVHRDLKSQNVLIDIDGDVKLCDFGLVCTKERTAGTPNYMPPELLAGKPFSKAVDVYMFGVLLWEMFARDVPFRGYDIDDIQRKVLNGDRPAIPTIDCPPACQDLIRQCWSGDPTRRPSFD----VIERTLQHVDVRATVQAVDNIVEEDALDSLLS 291
[Close]
BLAST of jgi.p|Trimin1|171333 vs. uniprot
Match: A0A024TNT8_9STRA (TKL protein kinase n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TNT8_9STRA)

HSP 1 Score: 280 bits (717), Expect = 7.320e-91
Identity = 135/280 (48.21%), Postives = 189/280 (67.50%), Query Frame = 1 
Query:    7 AVAYSDLTVGEKIGGGGVGLVHRGWYNRKPVALKVLFDARMNEELIREFTEEVNVLAQLRHPNIVRVLGGSTSPPHLFFLMELCESSVYEELHIKRRRYGMQELLKIALDTVYAMQYLHSQSPPVVHRDLKSHNLLIGADGNTKLCDFGLVCTSSTTAGTPCYMAPELLQNRPFTKSVDVYAFGILLWELFSQDLPFRGLEVGDVKEVVTAGQRPTVPRGDTPRQIRDMMEQCWAQVPMERPTFGQCVPVLQELVQEHSSRSHVDDLDDF-GGDSLDCLL 843
            ++ + +LTVG+KIGGGGVG+V+RG Y  +PVALK LFD R++  L +EF +E+ V+++L HPN+V  +G    PP+L F+MELC  S+Y++LH       +  L+K+A     AMQYLHS +P +VHRDLKS N+L+ A G  KLCDFGLVCT   TAGTP YM PELL  +PF+K+VDV+ FG+LLWE+F++D+PFRG  V D++  V  G RP++P  D P   +D+M QCW+  P  RPTF      +  ++     +S V  +D+    D+LD L+
Sbjct:   16 SIPFKELTVGDKIGGGGVGIVYRGRYQGRPVALKTLFDPRVDHALKQEFMDELLVMSKLVHPNVVEFIGACIEPPNLCFVMELCSMSLYDQLHGTNEPISVSALVKMATSIASAMQYLHSLTPAIVHRDLKSQNVLLDATGTVKLCDFGLVCTKEGTAGTPAYMPPELLAGKPFSKAVDVHMFGMLLWEMFARDIPFRGYAVDDIQRKVLHGDRPSIPTIDCPPSCQDLMRQCWSAEPSHRPTFD----AIHRMLSAVDVKSVVHAVDNIMEEDALDSLM 291
[Close]
BLAST of jgi.p|Trimin1|171333 vs. uniprot
Match: A0A8K1C3C7_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C3C7_PYTOL)

HSP 1 Score: 279 bits (713), Expect = 1.810e-90
Identity = 136/283 (48.06%), Postives = 191/283 (67.49%), Query Frame = 1 
Query:   10 VAYSDLTVGEKIGGGGVGLVHRGWYNRKPVALKVLFDARMNEELIREFTEEVNVLAQLRHPNIVRVLGGSTSPPHLFFLMELCESSVYEELHIKRRRYGMQELLKIALDTVYAMQYLHSQSPPVVHRDLKSHNLLIGADGNTKLCDFGLVCTSSTTAGTPCYMAPELLQNRPFTKSVDVYAFGILLWELFSQDLPFRGLEVGDVKEVVTAGQRPTVPRGDTPRQIRDMMEQCWAQVPMERPTFGQCVPVLQELVQE----HSSRSHVDDLDDFGGDSLDCLLK 846
            + +S++TV E IGGGGV LVHRG Y ++ VALK +FD R++E L +EF +E+ V++QLRHPNIV ++G    PP +  +MELCE+S++  LH+    + +Q   +IA D    M++LHS SP V+HRDLKS N+L+   G  KLCDFGLV T +TTAGTP YM PELL  +PF+K+VDVY FG+LLWE+F++D+PFRG +V D++  V AG+R  +P  D P + + +M++CW   P  RPTF +   +L   V       SS S ++D      D+LD LL+
Sbjct:    9 IKFSEITVCEPIGGGGVALVHRGIYRKQSVALKTIFDPRVDEALKQEFMDELLVMSQLRHPNIVSLIGACVEPPTMCMVMELCETSLHHALHVDNTFFSVQHSTRIAADVASVMRFLHSLSPAVIHRDLKSPNVLLDKKGTAKLCDFGLVRTKTTTAGTPSYMPPELLSGKPFSKAVDVYMFGVLLWEIFARDIPFRGFDVADIRRKVLAGERFRIPTIDCPEECQKLMKRCWDAEPSRRPTFEEIHDILSHAVAHPSYVESSCSLLED------DALDSLLR 285
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|171333 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YIR4_9STRA6.330e-209100.00CTR-like PK n=1 Tax=Tribonema minus TaxID=303371 R... [more]
D7FVC7_ECTSI2.620e-10252.48CTR-like PK n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]
A0A7S2WD89_9STRA3.220e-9951.25Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A1V9ZDZ5_9STRA3.040e-9448.06Serine/threonine protein kinase n=1 Tax=Achlya hyp... [more]
A0A067CQ82_SAPPC5.710e-9247.18TKL protein kinase n=2 Tax=Saprolegnia TaxID=4769 ... [more]
G4ZW68_PHYSP5.900e-9251.25Protein kinase domain-containing protein n=16 Tax=... [more]
A0A1W0A757_9STRA6.100e-9247.67Serine/threonine protein kinase n=1 Tax=Thraustoth... [more]
A0A485KH26_9STRA1.980e-9148.93Aste57867_5585 protein n=1 Tax=Aphanomyces stellat... [more]
A0A024TNT8_9STRA7.320e-9148.21TKL protein kinase n=2 Tax=Aphanomyces invadans Ta... [more]
A0A8K1C3C7_PYTOL1.810e-9048.06Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_81contigContig_81:137933..140096 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|171333|e_gw1.81.153.1
Descriptionprotein kinase activity
COG categoryKLT
Max annot lvl2759|Eukaryota
EggNOG OGsCOG0515@1|root,KOG0192@2759|Eukaryota
Evalue3.78e-92
Seed ortholog112098.XP_008618712.1
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionCTR-like protein kinase
Ec32 orthologEc-14_000610.1
TranscriptId171655
TrackFilteredModels1
ProteinId171333
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|171333gene_9738Tribonema minus UTEX_B_3156 geneContig_81 137933..140096 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_9738_1exon_9738_1Tribonema minus UTEX_B_3156 exonContig_81 137933..138046 +
exon_9738_2exon_9738_2Tribonema minus UTEX_B_3156 exonContig_81 138219..138555 +
exon_9738_3exon_9738_3Tribonema minus UTEX_B_3156 exonContig_81 138964..139193 +
exon_9738_4exon_9738_4Tribonema minus UTEX_B_3156 exonContig_81 139929..140096 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_9738CDS_9738Tribonema minus UTEX_B_3156 CDSContig_81 137933..138046 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|171333Trimin1|171333|e_gw1.81.153.1Tribonema minus UTEX_B_3156 polypeptideContig_81 137933..140096 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_9738 ID=mRNA_9738|Name=jgi.p|Trimin1|171333|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=849bp|location=Sequence derived from alignment at Contig_81:137933..140096+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGCAAGCTGTTGCGTACTCGGATCTGACGGTGGGAGAAAAGATAGGCGG
TGGCGGCGTGGGGTTGGTGCACCGAGGGTGGTACAACAGAAAGCCTGTCG
CGCTCAAAGTGCTGTTCGATGCCAGGATGAATGAAGAGCTCATACGCGAG
TTTACGGAGGAGGTCAACGTGTTAGCCCAGCTTCGCCACCCCAATATAGT
GAGGGTACTGGGAGGAAGCACTTCACCGCCGCACCTGTTTTTCCTGATGG
AGCTGTGCGAGTCATCGGTTTACGAGGAGCTGCACATCAAGAGGCGGCGA
TACGGCATGCAGGAGCTGCTGAAGATAGCACTGGACACTGTGTACGCCAT
GCAGTATCTGCACTCTCAGTCACCGCCGGTTGTACACCGCGACCTGAAGA
GCCACAACTTGCTGATTGGCGCCGATGGGAACACCAAGCTGTGCGATTTC
GGACTTGTGTGCACAAGCAGCACAACGGCAGGAACGCCGTGTTACATGGC
TCCCGAGCTGCTGCAGAACCGCCCGTTCACCAAATCGGTGGACGTGTACG
CGTTCGGCATCCTCCTGTGGGAGCTCTTCTCACAGGATCTGCCTTTCAGA
GGCCTAGAGGTGGGGGACGTAAAGGAGGTGGTCACCGCTGGTCAGCGACC
TACGGTGCCGAGGGGGGATACGCCAAGACAGATCCGCGACATGATGGAAC
AGTGCTGGGCGCAGGTGCCAATGGAGCGACCCACATTTGGCCAGTGTGTT
CCGGTGCTTCAGGAACTGGTTCAGGAGCACAGCAGCAGGAGCCACGTAGA
TGACTTAGATGACTTTGGCGGCGATTCCCTTGACTGCTTGCTGAAGTGA
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protein sequence of jgi.p|Trimin1|171333

>Trimin1|171333|e_gw1.81.153.1 ID=Trimin1|171333|e_gw1.81.153.1|Name=jgi.p|Trimin1|171333|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=283bp
MQAVAYSDLTVGEKIGGGGVGLVHRGWYNRKPVALKVLFDARMNEELIRE
FTEEVNVLAQLRHPNIVRVLGGSTSPPHLFFLMELCESSVYEELHIKRRR
YGMQELLKIALDTVYAMQYLHSQSPPVVHRDLKSHNLLIGADGNTKLCDF
GLVCTSSTTAGTPCYMAPELLQNRPFTKSVDVYAFGILLWELFSQDLPFR
GLEVGDVKEVVTAGQRPTVPRGDTPRQIRDMMEQCWAQVPMERPTFGQCV
PVLQELVQEHSSRSHVDDLDDFGGDSLDCLLK*
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mRNA from alignment at Contig_81:137933..140096+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_9738 ID=mRNA_9738|Name=jgi.p|Trimin1|171333|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2164bp|location=Sequence derived from alignment at Contig_81:137933..140096+ (Tribonema minus UTEX_B_3156 )
ATGCAAGCTGTTGCGTACTCGGATCTGACGGTGGGAGAAAAGATAGGCGG
TGGCGGCGTGGGGTTGGTGCACCGAGGGTGGTACAACAGAAAGCCTGTCG
CGCTCAAAGTGCTGGTAAGTTGAGCACCAGATGTGCTTGAATGAGGCAGC
CATTTACAGAATATGCAGCGTTATCTTCAGCGTGCGAAGCGTTCTGGGCT
GTCGCGCAAGGCTGGTGCTTAAAACAGAATGAGGTGAAAATGGCTGGACC
CTTCAAGACCGCTTCCTCCCCTTGACTGTGTACCAGTTCGATGCCAGGAT
GAATGAAGAGCTCATACGCGAGTTTACGGAGGAGGTCAACGTGTTAGCCC
AGCTTCGCCACCCCAATATAGTGAGGGTACTGGGAGGAAGCACTTCACCG
CCGCACCTGTTTTTCCTGATGGAGCTGTGCGAGTCATCGGTTTACGAGGA
GCTGCACATCAAGAGGCGGCGATACGGCATGCAGGAGCTGCTGAAGATAG
CACTGGACACTGTGTACGCCATGCAGTATCTGCACTCTCAGTCACCGCCG
GTTGTACACCGCGACCTGAAGAGCCACAACTTGCTGATTGGCGCCGATGG
GAACACCAAGCTGTGCGATTTCGGTGAGTGCATATGTCAACGGCGATGTA
CATGCATTCATCACTTGTGCACGGTTCAGGAATGTGCTGACGTGCGCGAA
GAACTTGTGATTGGCAGTTGTCATTGAGTACTCAAAGATTTCTGCTGTAG
GGGCAGTAGTGAGCGTGGATCCTTGCCGTCCTTTGTGCCAACCCTGTCGC
CCCACAAAGTTGAGCTCTCGGCTTGGATGCCAGAAGCCATGTAGGTAGGT
GTCTTTGGCTCTCAGCGGCAGTTGCAGCGTTCATGGGCAGTTGCTGTTGA
CCTGTGCAAAATTGCATGTTGAAATTGCAACGCGAGCACACATGCGGCAG
CTGGCATCCAAGAATGACGCCACTTCCTCGCATGCACACTCACAACTCAC
ACAACAACTCCCCCCTGACCTTGCGGTTCAGGACTTGTGTGCACAAGCAG
CACAACGGCAGGAACGCCGTGTTACATGGCTCCCGAGCTGCTGCAGAACC
GCCCGTTCACCAAATCGGTGGACGTGTACGCGTTCGGCATCCTCCTGTGG
GAGCTCTTCTCACAGGATCTGCCTTTCAGAGGCCTAGAGGTGGGGGACGT
AAAGGAGGTGGTCACCGCTGGTCAGCGACCTACGGTGCCGAGGGGGGATA
CGCCAAGACAGGTAAGCGGCGCGGCGTGTGTGTGATGTTGTGCACTGGTG
CGCTGCTGTTGCGCACTGTTACACTGCTGTTGAGCGCTGCTGCGCTGCTG
TTGAGCACTGTGTTGCACTGCTATTGAGCACTGCTGTACTGCTGTTGAGC
ACTGTTGCGCTGCTGTTGAGCACTGGTGCGCTGCTGTTGAGAGCACTTGC
ACTGCTATTGAGCGCTGCTGCGCTGCTGTTGAGCACTTGCACTGCTATTG
AGCACTGCTGCGCTGCTGTTGAGCACTGTTGCGCTGCAATGCACTCAACC
AGTCTTCCGGCGTCAATGCCCGCAGCCATCAAGATGAATGATGAATGTCC
TAACTATCCCTGTCAATAATTGCTTCGGCGCGCACAACAACGAAATGGGC
AGTGACAACACTACATTTCTGCCATCAGACAGGAATGATTACAGCGGATT
GGAAGCAGTGCGGTGTTGTTCAGACAAAGGCGCTCTCTTCGAGCAGCAGG
GCACGAAAACAGTTTTGTGTGTGACTTGTGAGCTGCAACGACTGCACTTC
AGATGCTGGAGTACAAGAGTTCTTTGTATGCCATCGGCCACAGTAGCTCG
ACCCAAGGGCCCGACAATTGGCACCATTTGTGCTTCGAAGTAAGCTGAAT
CCCCTGACGCACCAAGGCTATGAGCTGGCATGTGATGCGCTCCTGTGATC
ACATGAATACTGACTTGCCCACGTGCCAACGCTGTCTGTTTTGTAGATCC
GCGACATGATGGAACAGTGCTGGGCGCAGGTGCCAATGGAGCGACCCACA
TTTGGCCAGTGTGTTCCGGTGCTTCAGGAACTGGTTCAGGAGCACAGCAG
CAGGAGCCACGTAGATGACTTAGATGACTTTGGCGGCGATTCCCTTGACT
GCTTGCTGAAGTGA
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Coding sequence (CDS) from alignment at Contig_81:137933..140096+

>mRNA_9738 ID=mRNA_9738|Name=jgi.p|Trimin1|171333|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=849bp|location=Sequence derived from alignment at Contig_81:137933..140096+ (Tribonema minus UTEX_B_3156 )
ATGCAAGCTGTTGCGTACTCGGATCTGACGGTGGGAGAAAAGATAGGCGG
TGGCGGCGTGGGGTTGGTGCACCGAGGGTGGTACAACAGAAAGCCTGTCG
CGCTCAAAGTGCTGTTCGATGCCAGGATGAATGAAGAGCTCATACGCGAG
TTTACGGAGGAGGTCAACGTGTTAGCCCAGCTTCGCCACCCCAATATAGT
GAGGGTACTGGGAGGAAGCACTTCACCGCCGCACCTGTTTTTCCTGATGG
AGCTGTGCGAGTCATCGGTTTACGAGGAGCTGCACATCAAGAGGCGGCGA
TACGGCATGCAGGAGCTGCTGAAGATAGCACTGGACACTGTGTACGCCAT
GCAGTATCTGCACTCTCAGTCACCGCCGGTTGTACACCGCGACCTGAAGA
GCCACAACTTGCTGATTGGCGCCGATGGGAACACCAAGCTGTGCGATTTC
GGACTTGTGTGCACAAGCAGCACAACGGCAGGAACGCCGTGTTACATGGC
TCCCGAGCTGCTGCAGAACCGCCCGTTCACCAAATCGGTGGACGTGTACG
CGTTCGGCATCCTCCTGTGGGAGCTCTTCTCACAGGATCTGCCTTTCAGA
GGCCTAGAGGTGGGGGACGTAAAGGAGGTGGTCACCGCTGGTCAGCGACC
TACGGTGCCGAGGGGGGATACGCCAAGACAGATCCGCGACATGATGGAAC
AGTGCTGGGCGCAGGTGCCAATGGAGCGACCCACATTTGGCCAGTGTGTT
CCGGTGCTTCAGGAACTGGTTCAGGAGCACAGCAGCAGGAGCCACGTAGA
TGACTTAGATGACTTTGGCGGCGATTCCCTTGACTGCTTGCTGAAGTGA
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