mRNA_9721 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|169691
Unique NamemRNA_9721
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
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BLAST of jgi.p|Trimin1|169691 vs. uniprot
Match: A0A836CAG6_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAG6_9STRA)

HSP 1 Score: 280 bits (717), Expect = 1.080e-95
Identity = 138/138 (100.00%), Postives = 138/138 (100.00%), Query Frame = 1 
Query:    1 RRRRAQDFDVVRLLGTGGYGSVFLVRERRGGGAAHAVKVVPKTRVEGVTDWMRVELRVLARTHHPNVVQLEFCLQSEGRIYVFMEYIRGCTLKSLLRAHRARGGLPIPALRFWFAELALALGYVHALGVIHRDVKPDK 414
            RRRRAQDFDVVRLLGTGGYGSVFLVRERRGGGAAHAVKVVPKTRVEGVTDWMRVELRVLARTHHPNVVQLEFCLQSEGRIYVFMEYIRGCTLKSLLRAHRARGGLPIPALRFWFAELALALGYVHALGVIHRDVKPDK
Sbjct:    1 RRRRAQDFDVVRLLGTGGYGSVFLVRERRGGGAAHAVKVVPKTRVEGVTDWMRVELRVLARTHHPNVVQLEFCLQSEGRIYVFMEYIRGCTLKSLLRAHRARGGLPIPALRFWFAELALALGYVHALGVIHRDVKPDK 138
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BLAST of jgi.p|Trimin1|169691 vs. uniprot
Match: A0A7S4DFN8_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DFN8_HETAK)

HSP 1 Score: 154 bits (389), Expect = 1.280e-43
Identity = 78/144 (54.17%), Postives = 101/144 (70.14%), Query Frame = 1 
Query:    1 RRRRAQDFDVVRLLGTGGYGSVFLVRERR---GGGAA----HAVKVVPKTRVEGVTDWMRVELRVLARTHHPNVVQLEFCLQSEGRIYVFMEYIRGCTLKSLLRAHRARGGLPIPALRFWFAELALALGYVHALGVIHRDVKPD 411
            R+ R  +F VVRLLG G YG V+L RER    GGG A    +AVKV+PK  ++ V +WMR EL VL +  HPNVV L +CLQS  +IY+ MEY+RG TLK ++R  + R GL     +FWFAELALALGY+H++GV+H D+KP+
Sbjct:   33 RQPRVDEFQVVRLLGKGSYGRVYLTRERGAPLGGGGAPGELYAVKVMPKRLIDDVNEWMRAELAVLVQAQHPNVVALRYCLQSTSKIYLVMEYVRGGTLKEIVRRRQLRPGL----FKFWFAELALALGYIHSMGVVHGDLKPE 172
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BLAST of jgi.p|Trimin1|169691 vs. uniprot
Match: A0A4D9D4S7_9STRA (Guanylate cyclase n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D4S7_9STRA)

HSP 1 Score: 137 bits (345), Expect = 7.820e-35
Identity = 76/134 (56.72%), Postives = 96/134 (71.64%), Query Frame = 1 
Query:   10 RAQDFDVVRLLGTGGYGSVFLVRERRGGGAAHAVKVVPKTRVEGVTDWMRVELRVLARTHHPNVVQLEFCLQSEGRIYVFMEYIRGCTLKSLLRAHRARGGLPIPALRFWFAELALALGYVHALGVIHRDVKPD 411
            R +DF+++ LLG+GGYGSV L RE   GG   A+KV+ K R  GV+D MRVEL VLA+  HP+VVQ  +CLQ++ RI + MEYIRG TLK+LL+   +    P   LR W AEL LALGY+H+L VIHRD+KPD
Sbjct: 1404 RLEDFEILGLLGSGGYGSVHLAREGHSGGLV-AMKVMFKRR-RGVSDLMRVELNVLAQVQHPHVVQFHYCLQTKSRIILVMEYIRGGTLKALLKEPLSLRPPP-RVLRRWAAELVLALGYLHSLHVIHRDIKPD 1534
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BLAST of jgi.p|Trimin1|169691 vs. uniprot
Match: A0A4S2LPN3_OPIFE (Uncharacterized protein n=1 Tax=Opisthorchis felineus TaxID=147828 RepID=A0A4S2LPN3_OPIFE)

HSP 1 Score: 104 bits (260), Expect = 1.840e-23
Identity = 61/134 (45.52%), Postives = 87/134 (64.93%), Query Frame = 1 
Query:   22 FDVVRLLGTGGYGSVFLVRERRG--GGAAHAVKVVPKTRVEGVTDWMR--VELRVLARTHHPNVVQLEFCLQSEGRIYVFMEYIRGCTLKSLLRAHRARGGLPIPALRFWFAELALALGYVHALGVIHRDVKPD 411
            F ++R+LG G +G VFLVR+R G   G   A+KV+ K  ++ + D +R  VE  +LA   HP +V+LE+  Q+EGR+Y+ +EY+RG  L S L        LP    RF+ AELALAL +VH LG+I+RD+KP+
Sbjct:   28 FQLLRVLGKGSFGKVFLVRKRTGPDNGTMFAMKVLKKASLK-LRDRVRTKVERDILAAVRHPFIVRLEYAFQTEGRLYLILEYLRGGDLFSRLSKEVV---LPESDARFYMAELALALNHVHQLGIIYRDLKPE 157
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BLAST of jgi.p|Trimin1|169691 vs. uniprot
Match: A0A0M3JVR7_ANISI (Putative ribosomal protein S6 kinase alpha-1 (inferred by orthology to a C. elegans protein) n=1 Tax=Anisakis simplex TaxID=6269 RepID=A0A0M3JVR7_ANISI)

HSP 1 Score: 100 bits (249), Expect = 1.910e-23
Identity = 54/138 (39.13%), Postives = 93/138 (67.39%), Query Frame = 1 
Query:   13 AQDFDVVRLLGTGGYGSVFLVRERRGG--GAAHAVKVVPKTRVEGVTDWMR--VELRVLARTHHPNVVQLEFCLQSEGRIYVFMEYIRGCTLKSLLRAHRARGGLPIPALRFWFAELALALGYVHALGVIHRDVKPDK 414
            A  F+++++LG G +G VFLVR+ RG   G+ +A+KV+ K  ++ V D MR  +E  +LA+ HHP +V+L +  Q+EG++Y+ ++++RG  L + L             ++F+ AELALAL ++H+LG+++RD+KP+K
Sbjct:   38 ASQFELLKVLGQGSFGKVFLVRKIRGRDTGSLYAMKVLKKATLK-VRDRMRTKMERNILAQIHHPFIVRLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVM---FTEEDVKFYLAELALALNHLHSLGIVYRDLKPEK 171
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BLAST of jgi.p|Trimin1|169691 vs. uniprot
Match: A0A4U5PAU7_STECR (Uncharacterized protein n=2 Tax=Steinernema carpocapsae TaxID=34508 RepID=A0A4U5PAU7_STECR)

HSP 1 Score: 103 bits (256), Expect = 1.920e-23
Identity = 54/137 (39.42%), Postives = 92/137 (67.15%), Query Frame = 1 
Query:   13 AQDFDVVRLLGTGGYGSVFLVRERRG--GGAAHAVKVVPKTRVEGVTDWMR--VELRVLARTHHPNVVQLEFCLQSEGRIYVFMEYIRGCTLKSLLRAHRARGGLPIPALRFWFAELALALGYVHALGVIHRDVKPD 411
            A  FD++++LG G +G VFLVR+  G  GG  +A+KV+ K+ ++ V D +R  +E  +LAR  HP +V L +  Q++ ++Y+ +E+++G  L +LL      G  P P +RF+ AEL+LAL ++H+L +++RD+KP+
Sbjct:   50 ASSFDLLKMLGQGSFGKVFLVRKNLGLDGGNLYAMKVLTKSTLK-VRDRLRSKMERNILARIRHPFIVGLHYAFQTDDKLYLILEFLQGGDLFTLLAKD---GAFPEPKVRFYLAELSLALNHLHSLAIVYRDLKPE 182
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BLAST of jgi.p|Trimin1|169691 vs. uniprot
Match: A0A4S2LVI3_OPIFE (Uncharacterized protein n=4 Tax=Opisthorchiidae TaxID=6196 RepID=A0A4S2LVI3_OPIFE)

HSP 1 Score: 104 bits (260), Expect = 2.060e-23
Identity = 61/134 (45.52%), Postives = 87/134 (64.93%), Query Frame = 1 
Query:   22 FDVVRLLGTGGYGSVFLVRERRG--GGAAHAVKVVPKTRVEGVTDWMR--VELRVLARTHHPNVVQLEFCLQSEGRIYVFMEYIRGCTLKSLLRAHRARGGLPIPALRFWFAELALALGYVHALGVIHRDVKPD 411
            F ++R+LG G +G VFLVR+R G   G   A+KV+ K  ++ + D +R  VE  +LA   HP +V+LE+  Q+EGR+Y+ +EY+RG  L S L        LP    RF+ AELALAL +VH LG+I+RD+KP+
Sbjct:   28 FQLLRVLGKGSFGKVFLVRKRTGPDNGTMFAMKVLKKASLK-LRDRVRTKVERDILAAVRHPFIVRLEYAFQTEGRLYLILEYLRGGDLFSRLSKEVV---LPESDARFYMAELALALNHVHQLGIIYRDLKPE 157
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BLAST of jgi.p|Trimin1|169691 vs. uniprot
Match: A0A8J4SZS3_9TREM (Non-specific serine/threonine protein kinase n=1 Tax=Paragonimus heterotremus TaxID=100268 RepID=A0A8J4SZS3_9TREM)

HSP 1 Score: 102 bits (254), Expect = 9.230e-23
Identity = 58/134 (43.28%), Postives = 87/134 (64.93%), Query Frame = 1 
Query:   22 FDVVRLLGTGGYGSVFLVRERRGG--GAAHAVKVVPKTRVEGVTDWMRVELR--VLARTHHPNVVQLEFCLQSEGRIYVFMEYIRGCTLKSLLRAHRARGGLPIPALRFWFAELALALGYVHALGVIHRDVKPD 411
            F ++R+LG G +G VFLVR+R G   G   A+KV+ K  ++ + D +R +L   +LA  HHP +V+LE+  Q+EGR+Y+ +EY+RG  L S L    A     +   RF+ AEL LAL ++H LG+I+RD+KP+
Sbjct:   28 FQLLRVLGQGSFGKVFLVRKRVGADAGTLFAMKVLRKASLK-LRDRIRTKLERDILAAIHHPFIVRLEYAFQTEGRLYLILEYLRGGDLFSRLSKEVALSETDV---RFYLAELILALNHLHQLGIIYRDLKPE 157
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BLAST of jgi.p|Trimin1|169691 vs. uniprot
Match: A0A5J4NXL0_9TREM (Ribosomal protein S6 kinase alpha-1/2/3/6 n=1 Tax=Paragonimus westermani TaxID=34504 RepID=A0A5J4NXL0_9TREM)

HSP 1 Score: 100 bits (249), Expect = 6.210e-22
Identity = 59/146 (40.41%), Postives = 88/146 (60.27%), Query Frame = 1 
Query:   22 FDVVRLLGTGGYGSVFLVRERRGG--GAAHAVKVVPKTRVE------------GVTDWMRVELR--VLARTHHPNVVQLEFCLQSEGRIYVFMEYIRGCTLKSLLRAHRARGGLPIPALRFWFAELALALGYVHALGVIHRDVKPD 411
            F ++R+LG G +G VFLVR+R G   G   A+KV+ K  ++             V D +R +L   +LA  HHP +V+LE+  Q+EGR+Y+ +EY+RG  L S L    A   + +   RF+ AEL LAL ++H LG+I+RD+KP+
Sbjct:   28 FQLLRVLGQGSFGKVFLVRKRVGADAGTLFAMKVLRKASLKQAYEIHDLLPMFAVRDRIRTKLERDILAAIHHPFIVRLEYAFQTEGRLYLILEYLRGGDLFSRLSKEVALSEIDV---RFYLAELILALNHLHQLGIIYRDLKPE 170
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BLAST of jgi.p|Trimin1|169691 vs. uniprot
Match: A0A4E0RLR4_FASHE (Non-specific serine/threonine protein kinase n=1 Tax=Fasciola hepatica TaxID=6192 RepID=A0A4E0RLR4_FASHE)

HSP 1 Score: 100 bits (248), Expect = 8.530e-22
Identity = 56/134 (41.79%), Postives = 88/134 (65.67%), Query Frame = 1 
Query:   22 FDVVRLLGTGGYGSVFLVRERRGG--GAAHAVKVVPKTRVEGVTDWMRVELR--VLARTHHPNVVQLEFCLQSEGRIYVFMEYIRGCTLKSLLRAHRARGGLPIPALRFWFAELALALGYVHALGVIHRDVKPD 411
            F ++R+LG G +G VFLVR+R G   G   A+KV+ K  ++ + D +R ++   +LA   HP +V+LE+  Q+EG++Y+ +EY+RG  L + L        LP   +RF+ AELALAL ++H LG+I+RD+KP+
Sbjct:   29 FQLIRVLGQGSFGKVFLVRKRVGADTGTLFAMKVLRKASLK-LRDRIRTKMERDILAAIRHPFIVRLEYAFQTEGKLYLILEYLRGGDLFTRLSCEVM---LPENDVRFYLAELALALNHLHQLGIIYRDLKPE 158
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|169691 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CAG6_9STRA1.080e-95100.00Kinase-like domain-containing protein n=1 Tax=Trib... [more]
A0A7S4DFN8_HETAK1.280e-4354.17Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A4D9D4S7_9STRA7.820e-3556.72Guanylate cyclase n=3 Tax=Monodopsidaceae TaxID=42... [more]
A0A4S2LPN3_OPIFE1.840e-2345.52Uncharacterized protein n=1 Tax=Opisthorchis felin... [more]
A0A0M3JVR7_ANISI1.910e-2339.13Putative ribosomal protein S6 kinase alpha-1 (infe... [more]
A0A4U5PAU7_STECR1.920e-2339.42Uncharacterized protein n=2 Tax=Steinernema carpoc... [more]
A0A4S2LVI3_OPIFE2.060e-2345.52Uncharacterized protein n=4 Tax=Opisthorchiidae Ta... [more]
A0A8J4SZS3_9TREM9.230e-2343.28Non-specific serine/threonine protein kinase n=1 T... [more]
A0A5J4NXL0_9TREM6.210e-2240.41Ribosomal protein S6 kinase alpha-1/2/3/6 n=1 Tax=... [more]
A0A4E0RLR4_FASHE8.530e-2241.79Non-specific serine/threonine protein kinase n=1 T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_66contigContig_66:744851..746998 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|169691|e_gw1.66.78.1
BRITEko00000,ko00001,ko01000,ko01001,ko03019
KEGG Pathwayko04010,ko04114,ko04150,ko04714,ko04720,ko04722,ko04914,ko04931,map04010,map04114,map04150,map04714,map04720,map04722,map04914,map04931
KEGG koko:K04373
EC2.7.11.1
GOsGO:0000003,GO:0001556,GO:0001976,GO:0001990,GO:0002009,GO:0002016,GO:0002035,GO:0002165,GO:0003002,GO:0003006,GO:0003008,GO:0003013,GO:0003015,GO:0003044,GO:0003073,GO:0003081,GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0004711,GO:0004712,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005819,GO:0005829,GO:0005856,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0006915,GO:0007154,GO:0007165,GO:0007275,GO:0007276,GO:0007281,GO:0007292,GO:0007389,GO:0007399,GO:0007444,GO:0007472,GO:0007474,GO:0007476,GO:0007507,GO:0007528,GO:0007552,GO:0007560,GO:0007568,GO:0007610,GO:0007611,GO:0007612,GO:0007622,GO:0007623,GO:0007626,GO:0008015,GO:0008150,GO:0008152,GO:0008217,GO:0008219,GO:0008285,GO:0008306,GO:0008340,GO:0009653,GO:0009743,GO:0009791,GO:0009886,GO:0009887,GO:0009888,GO:0009893,GO:0009966,GO:0009968,GO:0009987,GO:0009994,GO:0009996,GO:0010033,GO:0010259,GO:0010453,GO:0010454,GO:0010468,GO:0010564,GO:0010604,GO:0010628,GO:0010639,GO:0010646,GO:0010648,GO:0010657,GO:0010658,GO:0010659,GO:0010721,GO:0010941,GO:0010942,GO:0010948,GO:0012501,GO:0015630,GO:0016043,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018105,GO:0018193,GO:0018209,GO:0019222,GO:0019538,GO:0019953,GO:0021700,GO:0022008,GO:0022412,GO:0022414,GO:0022603,GO:0023051,GO:0023052,GO:0023057,GO:0030154,GO:0030162,GO:0031594,GO:0031974,GO:0031981,GO:0032386,GO:0032387,GO:0032501,GO:0032502,GO:0032504,GO:0032879,GO:0032880,GO:0033043,GO:0033157,GO:0035106,GO:0035107,GO:0035114,GO:0035120,GO:0035220,GO:0035239,GO:0035295,GO:0035556,GO:0036211,GO:0036477,GO:0040020,GO:0042127,GO:0042221,GO:0042306,GO:0042308,GO:0042659,GO:0042682,GO:0042683,GO:0042981,GO:0043025,GO:0043065,GO:0043067,GO:0043068,GO:0043170,GO:0043204,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044297,GO:0044422,GO:0044424,GO:0044428,GO:0044430,GO:0044444,GO:0044446,GO:0044456,GO:0044464,GO:0044703,GO:0045202,GO:0045475,GO:0045595,GO:0045596,GO:0045664,GO:0045665,GO:0045786,GO:0045835,GO:0046532,GO:0046533,GO:0046578,GO:0046580,GO:0046822,GO:0046823,GO:0048070,GO:0048086,GO:0048468,GO:0048469,GO:0048477,GO:0048511,GO:0048512,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048563,GO:0048569,GO:0048583,GO:0048585,GO:0048599,GO:0048609,GO:0048699,GO:0048707,GO:0048729,GO:0048731,GO:0048736,GO:0048737,GO:0048856,GO:0048869,GO:0050767,GO:0050768,GO:0050789,GO:0050793,GO:0050794,GO:0050803,GO:0050807,GO:0050808,GO:0050877,GO:0050886,GO:0050890,GO:0050896,GO:0050932,GO:0050941,GO:0051049,GO:0051051,GO:0051056,GO:0051058,GO:0051093,GO:0051128,GO:0051129,GO:0051171,GO:0051223,GO:0051224,GO:0051239,GO:0051241,GO:0051246,GO:0051445,GO:0051447,GO:0051704,GO:0051716,GO:0051726,GO:0051783,GO:0051784,GO:0051960,GO:0051961,GO:0060047,GO:0060255,GO:0060284,GO:0060341,GO:0060429,GO:0060562,GO:0065007,GO:0065008,GO:0070013,GO:0070201,GO:0070613,GO:0070887,GO:0071310,GO:0071322,GO:0071695,GO:0071704,GO:0071840,GO:0072359,GO:0080090,GO:0090087,GO:0090317,GO:0097458,GO:0098793,GO:0140096,GO:1900180,GO:1900181,GO:1901564,GO:1901700,GO:1901701,GO:1902531,GO:1902532,GO:1903317,GO:1903827,GO:1903828,GO:1904396,GO:1904589,GO:1904590,GO:1904950,GO:2000026,GO:2000027,GO:2000241,GO:2000242
Preferred nameRPS6KA2
DescriptionRibosomal protein S6 kinase
COG categoryT
Max annot lvl33208|Metazoa
EggNOG OGsKOG0603@1|root,KOG0603@2759|Eukaryota,3AMZM@33154|Opisthokonta,3BAGS@33208|Metazoa,3CRGH@33213|Bilateria,4883N@7711|Chordata,492RQ@7742|Vertebrata,49Y84@7898|Actinopterygii
Evalue1.86e-22
Seed ortholog7955.ENSDARP00000044704
Hectar predicted targeting categoryother localisation
TranscriptId170013
TrackFilteredModels1
ProteinId169691
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|169691gene_9721Tribonema minus UTEX_B_3156 geneContig_66 744851..746998 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_9721_1exon_9721_1Tribonema minus UTEX_B_3156 exonContig_66 744851..745075 +
exon_9721_2exon_9721_2Tribonema minus UTEX_B_3156 exonContig_66 746000..746112 +
exon_9721_3exon_9721_3Tribonema minus UTEX_B_3156 exonContig_66 746920..746998 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_9721CDS_9721Tribonema minus UTEX_B_3156 CDSContig_66 744851..745075 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|169691Trimin1|169691|e_gw1.66.78.1Tribonema minus UTEX_B_3156 polypeptideContig_66 744851..746998 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_9721 ID=mRNA_9721|Name=jgi.p|Trimin1|169691|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=417bp|location=Sequence derived from alignment at Contig_66:744851..746998+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
CGCCGCCGCCGCGCGCAGGACTTCGACGTCGTGCGGCTGCTTGGCACGGG
CGGCTACGGCAGCGTCTTCCTTGTGCGTGAGCGGCGCGGCGGCGGCGCCG
CGCACGCCGTCAAGGTCGTCCCCAAGACGCGCGTCGAGGGCGTGACGGAC
TGGATGCGCGTGGAGCTGCGCGTGCTCGCGCGCACGCACCACCCCAACGT
CGTCCAGCTCGAGTTCTGCCTGCAGTCGGAGGGCCGCATCTACGTCTTCA
TGGAGTACATCCGCGGCTGCACGCTCAAGTCGCTGCTGCGCGCGCACCGC
GCGCGTGGCGGCCTGCCCATCCCCGCCCTGCGCTTCTGGTTTGCGGAGCT
CGCGCTCGCGCTCGGCTACGTGCACGCCCTCGGGGTCATTCACAGGGACG
TCAAGCCTGACAAGTAA
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protein sequence of jgi.p|Trimin1|169691

>Trimin1|169691|e_gw1.66.78.1 ID=Trimin1|169691|e_gw1.66.78.1|Name=jgi.p|Trimin1|169691|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=139bp
RRRRAQDFDVVRLLGTGGYGSVFLVRERRGGGAAHAVKVVPKTRVEGVTD
WMRVELRVLARTHHPNVVQLEFCLQSEGRIYVFMEYIRGCTLKSLLRAHR
ARGGLPIPALRFWFAELALALGYVHALGVIHRDVKPDK*
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mRNA from alignment at Contig_66:744851..746998+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_9721 ID=mRNA_9721|Name=jgi.p|Trimin1|169691|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2148bp|location=Sequence derived from alignment at Contig_66:744851..746998+ (Tribonema minus UTEX_B_3156 )
CGCCGCCGCCGCGCGCAGGACTTCGACGTCGTGCGGCTGCTTGGCACGGG
CGGCTACGGCAGCGTCTTCCTTGTGCGTGAGCGGCGCGGCGGCGGCGCCG
CGCACGCCGTCAAGGTCGTCCCCAAGACGCGCGTCGAGGGCGTGACGGAC
TGGATGCGCGTGGAGCTGCGCGTGCTCGCGCGCACGCACCACCCCAACGT
CGTCCAGCTCGAGTTCTGCCTGCAGGTGCGCGTTCGCGCTGTTCGCTGTT
GTGTGGCGGCGCCGCGTGACGGCGCAGCACAAGAAGTACGCGCCTTGCGG
CCCCGTCTGTGTAGAGCACGGTGTCATTGCGTGTGAGGGGAACGTGGTGC
AGCCGCTGCGTGTGTCAAGTTCTGCCTGCAGGTGCGCGCGCGCGCGCTGC
GCGCCGGTCTCGTGGCAACGCAGCGAGCGACCCAGTTGTCCTCGCTGGTT
GACTGCTGCCATTGTAGAGACGAGGTCTACTAGCGCGCCGGAAGTGCGTT
CCGTCAGACCGGTCAGCGCTCTTTGTTGCTGCTGCTGCTGTTGCTGCTGC
TGTTGCTGCTGCTGATGATGATGCTGCTGTGTCGCAGCGGCAGCACGGCG
CGGCGGCGGCGGCGAAGGCCGCGCGTGTGTGGCTCGGTTTGTGTAGAGCT
CGGCGCCGTTCTCTGCGCACCACTGTACTGAAGTGTGTGTGCTCCGCGCC
CTCGTCTGGCAACACAGCAACCCAAATTACCTCTCTGGTTGCCTTCTGCC
ATCACGAGGTGTACCAGCGTGCCATTAGTGTGTTCGGTCAGACCATTGCT
GGATTCGCTACGCGCGCGTGCGGTGCCGCAGACGGCTTTGGCGGCTGAGG
CTGCCCGCGCAAGGCTCGCTCGTGTGTAGGAGGGCGTGGCGCCATTCCGT
GTGAGAGGGCCAATGTACGTGCGCGTTCGCATTCGTACACCACTGCTGCG
CGCCAGCCCGGGGCTCCTTGCCGCAGGACGCCGCACACACACCTGTCGCT
GCACGTGGCATCGCCCGCCATAGTCCCCCCCCCCCCCCCCCCCCCCCCGG
GTCTCAACACCCCCCTGGCTCCCCTGCCCCGCGAGCCGCTCACCCCCCGC
CCCCCCCCTTTCTTGTCGCTTATCTACCCCCTCTCCCCCCCCCGTGCAGT
CGGAGGGCCGCATCTACGTCTTCATGGAGTACATCCGCGGCTGCACGCTC
AAGTCGCTGCTGCGCGCGCACCGCGCGCGTGGCGGCCTGCCCATCCCCGC
CCTGCGCTTCTGGTGAGCCGCAGCGCACTCGCTTGAGCGTTGCTGCATGT
GCGTATCGCCCCCGGCAGAGGAAGGCGTGCACGTGGACTGGTTGCAGCGG
CAGCGACTGCGCCGGCGCGCACTGGCGGGGCTGCTGCCTCTGTTTGTGTC
AGGCGCCGGCTTGAGCGCGTGCGCGCCACGTGCAGCATGGGCCAATGAAG
TGCTGAGGTGAAACGGTCTGCTGGATGTTGTTTATTACGAGTGACAGCGC
TGTATCGCGCGGGAGGGCGCGGGCGCGATGGTACACCGAGGGCCCCGTGC
TCTGCGGTGACCGACTGTGTCAGGGCAGCTTGTTTTGTCTCCACGACGCT
GCAGGCATGCTCATATGCAAGGCGTTGGGTAGTCGGACGTGCAGTGATGC
GCCCAGTTGTGGCCGGGTCACGTCAGCGCTCGACGCCGCTTCCAGCCAGC
AGCAGCGAAGATGAGCGACGGTCCAGCGGTCACGCTGACTTCTCGCTGCC
CCAGCCTAGAGGAAGGGGGGGGGGGGGGGAGGGGTGTTGTCGGAGCGCTG
AGCTCGGTGAGCTTGTCACGCAGCAGCGCCTCAGTGCTCGTGGAGGGGCG
CAGCAGCGCTCAGCGCCATCATCGAAAGCAGACGGGCGCAGCGCCCGCCG
CCCGTACCTGCGCACCGCCGCTCGCCGGCGCAGCGCAGGGCTGCCTGCTG
CACGGTCTGCGATGCGCGACACGCACGCACGCGCGCCGCTTTTGCTGCAC
GTCCTCGCCGCAGCCATGCGCATGACCCGACCCTCGCCCTTACTCTGACT
GTTACCCTTATCCTGACAGGTTTGCGGAGCTCGCGCTCGCGCTCGGCTAC
GTGCACGCCCTCGGGGTCATTCACAGGGACGTCAAGCCTGACAAGTAA
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Coding sequence (CDS) from alignment at Contig_66:744851..746998+

>mRNA_9721 ID=mRNA_9721|Name=jgi.p|Trimin1|169691|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=417bp|location=Sequence derived from alignment at Contig_66:744851..746998+ (Tribonema minus UTEX_B_3156 )
CGCCGCCGCCGCGCGCAGGACTTCGACGTCGTGCGGCTGCTTGGCACGGG
CGGCTACGGCAGCGTCTTCCTTGTGCGTGAGCGGCGCGGCGGCGGCGCCG
CGCACGCCGTCAAGGTCGTCCCCAAGACGCGCGTCGAGGGCGTGACGGAC
TGGATGCGCGTGGAGCTGCGCGTGCTCGCGCGCACGCACCACCCCAACGT
CGTCCAGCTCGAGTTCTGCCTGCAGTCGGAGGGCCGCATCTACGTCTTCA
TGGAGTACATCCGCGGCTGCACGCTCAAGTCGCTGCTGCGCGCGCACCGC
GCGCGTGGCGGCCTGCCCATCCCCGCCCTGCGCTTCTGGTTTGCGGAGCT
CGCGCTCGCGCTCGGCTACGTGCACGCCCTCGGGGTCATTCACAGGGACG
TCAAGCCTGACAAGTAA
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