mRNA_9642 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|169726
Unique NamemRNA_9642
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|169726 vs. uniprot
Match: A0A835YVC7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVC7_9STRA)

HSP 1 Score: 659 bits (1700), Expect = 1.600e-238
Identity = 349/349 (100.00%), Postives = 349/349 (100.00%), Query Frame = 1
Query:    1 MSVLVQETSPRHALVVHILYRGECFLETAEGLHDVLQRLGLASTISALAPGAEATPPWSEAFSNHLLLFIVLGGHLFEELPTTGILVNYEQMSSPWMTETYCAALRSAAVVCDFSDRNLSTLVQSLQLRQPCYTLPVYVPADAFQILPGAGSSDNEGDDCVDVLFYGCANARRTEMLRRLSAAGLRAEFHFEYALFGPERARAMARARVVLNLHYYEDAALEVHRLAPLLAAGCCVVSEPSADQELDARFRSAVAFARYDDIPAVVSWLSRSDDSSGGGSRSGRSGADWPGGWGCSGXXXXXXXXXRRTLQAAARKLAVAMQDDISPLSNAVAALAATAVARATESQAL 1047
            MSVLVQETSPRHALVVHILYRGECFLETAEGLHDVLQRLGLASTISALAPGAEATPPWSEAFSNHLLLFIVLGGHLFEELPTTGILVNYEQMSSPWMTETYCAALRSAAVVCDFSDRNLSTLVQSLQLRQPCYTLPVYVPADAFQILPGAGSSDNEGDDCVDVLFYGCANARRTEMLRRLSAAGLRAEFHFEYALFGPERARAMARARVVLNLHYYEDAALEVHRLAPLLAAGCCVVSEPSADQELDARFRSAVAFARYDDIPAVVSWLSRSDDSSGGGSRSGRSGADWPGGWGCSGXXXXXXXXXRRTLQAAARKLAVAMQDDISPLSNAVAALAATAVARATESQAL
Sbjct:    1 MSVLVQETSPRHALVVHILYRGECFLETAEGLHDVLQRLGLASTISALAPGAEATPPWSEAFSNHLLLFIVLGGHLFEELPTTGILVNYEQMSSPWMTETYCAALRSAAVVCDFSDRNLSTLVQSLQLRQPCYTLPVYVPADAFQILPGAGSSDNEGDDCVDVLFYGCANARRTEMLRRLSAAGLRAEFHFEYALFGPERARAMARARVVLNLHYYEDAALEVHRLAPLLAAGCCVVSEPSADQELDARFRSAVAFARYDDIPAVVSWLSRSDDSSGGGSRSGRSGADWPGGWGCSGXXXXXXXXXRRTLQAAARKLAVAMQDDISPLSNAVAALAATAVARATESQAL 349          
BLAST of jgi.p|Trimin1|169726 vs. uniprot
Match: A0A7R9YAN1_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YAN1_9STRA)

HSP 1 Score: 131 bits (329), Expect = 4.320e-31
Identity = 104/281 (37.01%), Postives = 135/281 (48.04%), Query Frame = 1
Query:   52 ILYRGECFLETAEGLHDVLQRLGLASTISALAPGAEATPPWSEAFSNHLLLFIVLGGHLFEELPTTGILVNYEQMSSPWMTETYCAALRSAAVVCDFSDRNLS-------------------TLVQSLQLRQ--PCYTL-----PVYVPADAFQILPGAGSSDNEGDDCVDVLFYGCANARRTEMLRRLSAAG----LRAEFHFEYALFGPERARAMARARVVLNLHYYEDAALEVHRLAPLLAAGCCVVSEPSADQELDARF--RSAVAFARYDDIPAVV 798
            ILY G  FLETA GLH VL RLG  S I          P           L I+LG +  + LP   I+   EQ +S W+T  Y + +R A  V DFS  N+                    T++++ Q  Q  P   L     P    ADA +  P +     +    +DVLFYG  N  R ++ ++L  A     L+  F   Y+LFG  R  A+ RA+VVLNLHYYE A+LEVHR+  LLA G  +VSE SAD  LD  +  R AV FA  + + A V
Sbjct:  101 ILYWGSVFLETAHGLHVVLNRLGYESAIVDGNSDHRRDPR----------LHILLGANFMKFLPENFIVYQMEQKTSKWITPQYESTMRRAKCVWDFSPANVEHWQAKGYTAAYVPLPVVTETVIETQQRYQGHPLAALSNDSSPASAAADATEA-PESVVEQWDKTRPIDVLFYGAPNHHRAKIRKQLEEAAEGKDLKILFSMHYSLFGKRREAAIQRAKVVLNLHYYEGASLEVHRIHHLLAHGKAIVSERSADPRLDEVYEKRGAVFFASEESLVADV 370          
BLAST of jgi.p|Trimin1|169726 vs. uniprot
Match: A0A7S3JZX3_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JZX3_9STRA)

HSP 1 Score: 120 bits (301), Expect = 3.950e-27
Identity = 86/251 (34.26%), Postives = 120/251 (47.81%), Query Frame = 1
Query:   73 FLETAEGLHDVLQRLGLASTISALAPGAEATPPWSEAFSNHLLLFIVLGGHLFEE--LPTTGILVNYEQMSSPWMTETYCAALRSAAVVCDFSDRNLSTLVQSLQLRQPCYTLPVYVPADA--FQILPGA-GSSDNEGDDCVDVLFYGCANARRTEML----RRLSAAGLRAEFHFEYALFGPERARAMARARVVLNLHYYEDAALEVHRLAPLLAAGCCVVSEPSADQELDARFRSAVAFARYDDIPAVV 798
            F ET  GL D+   LG    +  L  G + + PW+   + H++  +V   H+  +  +P    L   EQ+ SPW+TE Y      A  + DF+  +     +S           VYVP       + P        E     DVLF+G +N RR ++      RL+AAG    F+  Y LFG  R   +  A VVLN+HYYE AALEVHR+  LLA G CV+SE S D  LD+ + + VAF   + +  V 
Sbjct:   42 FAETGRGLADIFGLLGWHDQVY-LVQGNKGSAPWAVDGAEHVVWVLVGVTHMPSDWSMPRLYFLYQMEQLCSPWITEEYIKVAMGALSIWDFAPSHTEYWRKS-------GLSSVYVPLSIPLIWLAPNTLNKIQQEETQKTDVLFFGSSNKRRLQIQDTLEARLAAAGHTCAFYMNYDLFGQGRDSVVDNATVVLNIHYYEHAALEVHRINYLLARGKCVLSEWSVDSHLDSVYSAVVAFTPTESLADVA 284          
BLAST of jgi.p|Trimin1|169726 vs. uniprot
Match: F0YBX6_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YBX6_AURAN)

HSP 1 Score: 117 bits (294), Expect = 5.660e-27
Identity = 87/270 (32.22%), Postives = 121/270 (44.81%), Query Frame = 1
Query:   73 FLETAEGLHDVLQRLGLASTISALAPGAEATPPWSEAFSNHLLLFIVLGGHLFEEL---------PTTGILVNYEQMSSPWMTETYCAALRSAAVVCDFSDRNLSTLVQSLQLRQPCYTLPVYVPADAFQILPGAGSSDNEGDDCVDVLFYGCANARRTEML-------------------RRLSAAGLRAEFHFEYALFGPERARAMARARVVLNLHYYEDAALEVHRLAPLLAAGCCVVSEPSADQELDARFRSAVAFARYDDIPAVV 798
            FLE AEGL   L+ LG+A+ +     G EA P  S+       L++++G  L   +         P   ++   EQ+ S W+T  Y A +  A  + +F+  +      + +          YVP     + P    S        D+LFYGC NARR  +                    +R+       +F   + LFG  R  A  RA VVLN H+YE AALE HRL  LL  G CV+SEPSAD++LDA +   V FA Y D+P   
Sbjct:   10 FLEAAEGLRSALRLLGVAARVDV---GVEACPWVSDDE-----LWVLVGATLLPGVAPSDAPWPPPRRFVVYQMEQLGSAWLTPAYLALVARADALWEFAPSHAPRWAAAARR-------VAYVPLAPPDLGPAPPPSPAPA---ADLLFYGCGNARRAALRDACAALLAPRGYRVDFRGRKRVIQVRFNVDFRLGFDLFGAARDDAARRATVVLNAHFYEGAALETHRLNYLLQRGACVLSEPSADRDLDALYARGVRFAAYGDLPRAA 261          
BLAST of jgi.p|Trimin1|169726 vs. uniprot
Match: X0TMX0_9ZZZZ (Uncharacterized protein (Fragment) n=1 Tax=marine sediment metagenome TaxID=412755 RepID=X0TMX0_9ZZZZ)

HSP 1 Score: 115 bits (287), Expect = 3.240e-26
Identity = 80/233 (34.33%), Postives = 116/233 (49.79%), Query Frame = 1
Query:   73 FLETAEGLHDVLQRLGLASTISALAPGAEATPPWSEAFSNHLLLFIVLGGHLFEELPTTGILVNYEQMSSPWMTETYCAALRSAAVVCDFSDRNLSTLVQSLQLRQPCYTLPVYVPADAFQILPGAGSSDNEGDDCVDVLFYGCANARRTEMLRRLSAAGLRAEFHFEYALFGPERARAMARARVVLNLHYYEDAALEVHRLAPLLAAGCCVVSEPSADQELDARFRSAVAFA 771
            F E+A G+  +L++ G+      ++   EAT            L I+ G H   +LP   +L   EQ+ S + T +Y   ++ A  V D S R    L  SL       + PV V        P         +   D+LFYGC NARR+ +      + L ++F   + LFG  R R ++ A VVLN+H+Y +A+LEVHR+  LLA G  V+SEPS+D E+DA + S V FA
Sbjct:    3 FGESAAGMRALLEQQGVR-----VSEAEEATDD---------SLHILFGAHTMAKLPQRYVLYQGEQLKSSYFTHSYREKIKGAVHVFDHS-RKGQELCSSLGCESTQVSFPVSVDVSCVPPDP---------EQRYDLLFYGCGNARRSSLKESFRRSDLTSKFFLGFDLFGERRDREISSAAVVLNVHFYAEASLEVHRINYLLARGKVVLSEPSSDTEMDALYSSVVHFA 211          
BLAST of jgi.p|Trimin1|169726 vs. uniprot
Match: A0A7S3K191_9STRA (Hypothetical protein n=2 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K191_9STRA)

HSP 1 Score: 112 bits (280), Expect = 2.960e-24
Identity = 84/245 (34.29%), Postives = 120/245 (48.98%), Query Frame = 1
Query:   73 FLETAEGLHDVLQRLGLASTISALAPGAEATPPWSEAFSNHLLLFIVLGGHLFEE--LPTTGILVNYEQMSSPWMTETYCAALRSAAVVCDFSDRNLSTLVQSLQLRQPCYTLPVYVPADA--FQILPGAGSS---DNEGDDCVDVLFYGCANARRTEMLR----RLSAAGLRAEFHFE--YALFGPERARAMARARVVLNLHYYEDAALEVHRLAPLLAAGCCVVSEPSADQELDARFRSAVAF 768
            F ET  GL D+   LG    +  L  G + + PW+   + H++  +V   H+  +  +P    L   EQ+ SPW+TE Y      A  + DF+  +     +S           VYVP       + P    +     +     DVLF+G +NARR ++      RL+A G    F+ +  + LFG +R   +  A VVLNLHYYE AALEVH +  LLA G CV+SE S D  LD+ + +AVAF
Sbjct:   42 FAETGRGLADIFGLLGWHDQVY-LVQGNKGSAPWAVDGAEHVVWVLVGVTHMPSDWSMPRLYFLYQMEQLCSPWITEEYIKVAMGALSIWDFAPSHTEYWRKS-------GLSSVYVPLSIPLHWLAPNTIRNIQVKKKIHQKTDVLFFGSSNARRRQIQETLEARLAAVGYTCTFYMDSDHLLFGQDRDAVVDNAAVVLNLHYYEHAALEVHHINYLLARGKCVLSEWSVDSHLDSVYSAAVAF 278          
BLAST of jgi.p|Trimin1|169726 vs. uniprot
Match: Q6U8B0_RAOTE (Putative N-acetyl glucosaminyl transferase n=24 Tax=Klebsiella/Raoultella group TaxID=2890311 RepID=Q6U8B0_RAOTE)

HSP 1 Score: 108 bits (270), Expect = 3.520e-22
Identity = 76/207 (36.71%), Postives = 106/207 (51.21%), Query Frame = 1
Query:  202 LFIVLGGHLFEELPTTGILVNYEQ-MSSPWMTETYCAALRSAAVVCDFSDRNLSTLVQSLQLRQPCYTLPVYVPAD--AFQILPGAGSSDNEGDDCVDVLFYGCANARRTEMLRRLSAAGLRAEFHFEYA--LFGPERARAMARARVVLNLHYYEDAALEVHRLAPLLAAGCCVVSEPSADQELDARFRSAVAFARYDDIPAVVSWL 807
            L IV+   +F++LP   I    EQ ++S W TE Y A L +A  + D+S +N+  L+Q     Q  + +P+   AD  A+    G   SD +GD   DVLFYG  N  R    R+     L+  F+   A  +FG    + +  ARVV+N+HYYEDA LE  RL   L+ G  +VSE SAD E     +  + F    DI A+V  L
Sbjct:  630 LHIVVCPQMFKQLPKHYIAFQMEQSVNSRWFTEEYFARLNNAVAIFDYSLKNIEYLLQQGTPYQKLFYMPISSYADYPAYLTQIGYDLSDRKGDKAADVLFYGDPNCER----RKAYLQELKKHFNVTVASEVFGDRLTKMVKDARVVINIHYYEDALLETTRLYETLSLGTPIVSESSADIEEHQDLQGVIDFCPVGDIQAMVEKL 832          
BLAST of jgi.p|Trimin1|169726 vs. uniprot
Match: A0A1J5QAG8_9ZZZZ (Methyltransferase domain protein n=1 Tax=mine drainage metagenome TaxID=410659 RepID=A0A1J5QAG8_9ZZZZ)

HSP 1 Score: 105 bits (263), Expect = 1.360e-21
Identity = 89/257 (34.63%), Postives = 123/257 (47.86%), Query Frame = 1
Query:   67 ECFLETAEGLHDVLQRLGLASTISALAPGAEATPPWSEAFSNHLLLFIVLGGHLF---EELPTTGILVNYEQMS--SPWMTETYCAALRSAAVVCDFSDRNLSTLVQSLQLRQPCYTLPVYVPADAFQILPGAGSSDNEGDDCVDVLFYGCANARRTEMLRRLSAAGLRAEFHFEYALFGPERARAMARARVVLNLHYYEDAALEVHRLAPLLAAGCCVVSEPSADQELDARFRSAVAFARYDDIPAVVSWLSRSDD 822
            E F E AE +   L+  G  +  S  A  A   P             IV G +L     ELP   I+ N EQ+   S WM E Y + LRS  VV D+S RN++ L    +     + LP+       +I P A          +DVLFYG  N RR  ++  L AAG  A     + ++G ER   +ARA++VLN+H+YE    EV R++ LL+ G CVVSE   D  ++  +  AVAF+ Y+ +      L R DD
Sbjct:   24 EAFREIAETVVHGLRGAGHDAVFSETAFVAGRIP-------------IVFGANLVGHTAELPAHAIVYNLEQIEDGSVWMNELYLSILRSH-VVWDYSARNIAAL--KARGITNVHHLPIGYVRQLERIEPAAVKD-------IDVLFYGSMNPRREHVISALKAAG--ANVVSVFGVYGHERDALIARAKIVLNIHFYESKIFEVVRVSYLLSNGVCVVSEDGPDP-IEKAYSDAVAFSSYEQLVQACMTLLRDDD 254          
BLAST of jgi.p|Trimin1|169726 vs. uniprot
Match: UPI001F3007D2 (hypothetical protein n=1 Tax=Acidovorax sp. BoFeN1 TaxID=1231053 RepID=UPI001F3007D2)

HSP 1 Score: 105 bits (263), Expect = 2.060e-21
Identity = 83/208 (39.90%), Postives = 105/208 (50.48%), Query Frame = 1
Query:  205 FIVLGGHLFEELPT--TGILVNYEQ-MSSPWMTETYCAALRSAAVVCDFSDRNLSTLVQSLQLRQPCYTLPVYVPADAFQILPGAG------SSDNEGDDC-VDVLFYGCANARRTEMLRRLSAAGLRAEFHFEYALFGPERARAMARARVVLNLHYYEDAALEVHRLAPLLAAGCCVVSEPSADQELDARFRSAVAFARYDDIPAVV 798
            + V+   +F+ LP     I V  EQ +SS W T  Y + L ++  V D++  NL    Q L+ R   Y     VP   F    G G      S   +G D   DVLFYG  NA R + L  L+A G R +      LFGPE  RAMA ARVV+NLHYYE A LE  R+   L+ G  VVSE SADQ   +    AV F    D+PA++
Sbjct:  133 YFVVCPQMFKRLPPGEKRIAVQMEQSVSSRWFTPDYLSTLENSLAVIDYAQTNL----QFLEGRGIAYPHTFLVPVGGFA---GYGEYLRHNSLHAQGLDVPCDVLFYGDVNAPRRQQL--LAAIGERYQLRIVGNLFGPELHRAMASARVVVNLHYYEGALLETTRIHECLSLGVPVVSETSADQSEHSALEGAVRFVPVGDVPALL 331          
BLAST of jgi.p|Trimin1|169726 vs. uniprot
Match: A0A808Y2Z6_9ENTR (Uncharacterized protein n=5 Tax=Raoultella TaxID=160674 RepID=A0A808Y2Z6_9ENTR)

HSP 1 Score: 104 bits (260), Expect = 6.940e-21
Identity = 74/207 (35.75%), Postives = 105/207 (50.72%), Query Frame = 1
Query:  202 LFIVLGGHLFEELPTTGILVNYEQ-MSSPWMTETYCAALRSAAVVCDFSDRNLSTLVQSLQLRQPCYTLPVYVPADAFQILPGAGS--SDNEGDDCVDVLFYGCANARRTEMLRRLSAAGLRAEFHFEYA--LFGPERARAMARARVVLNLHYYEDAALEVHRLAPLLAAGCCVVSEPSADQELDARFRSAVAFARYDDIPAVVSWL 807
            L IV+   +FE+LP   I    EQ ++S W TE Y A L +A  + D+S +N+  L+Q     Q  + +P+   AD    L   G   S+ +GD   DVLFYG  N  R    R+     L+  F+   A  +FG    + +  ARVV+N+HYYEDA LE  RL   L+ G  +VSE S+D E     +  + F    DI ++V  L
Sbjct:  612 LHIVVCPQMFEQLPKHYIAFQMEQSVNSRWFTEDYFARLNNAVAIFDYSLKNIEYLLQQGIAYQKLFYMPISSYADYPSYLSQIGYDLSEKKGDKAADVLFYGDPNCER----RKAYLQELKKHFNVTVASEVFGDRLTKMVNDARVVINIHYYEDALLETTRLYETLSLGTPIVSESSSDIEEHQDLQGVIDFCPVGDIQSMVEKL 814          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|169726 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YVC7_9STRA1.600e-238100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7R9YAN1_9STRA4.320e-3137.01Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S3JZX3_9STRA3.950e-2734.26Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
F0YBX6_AURAN5.660e-2732.22Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
X0TMX0_9ZZZZ3.240e-2634.33Uncharacterized protein (Fragment) n=1 Tax=marine ... [more]
A0A7S3K191_9STRA2.960e-2434.29Hypothetical protein n=2 Tax=Aureoumbra lagunensis... [more]
Q6U8B0_RAOTE3.520e-2236.71Putative N-acetyl glucosaminyl transferase n=24 Ta... [more]
A0A1J5QAG8_9ZZZZ1.360e-2134.63Methyltransferase domain protein n=1 Tax=mine drai... [more]
UPI001F3007D22.060e-2139.90hypothetical protein n=1 Tax=Acidovorax sp. BoFeN1... [more]
A0A808Y2Z6_9ENTR6.940e-2135.75Uncharacterized protein n=5 Tax=Raoultella TaxID=1... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_66contigContig_66:95053..96102 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|169726|e_gw1.66.5.1
Descriptionglycosyltransferase involved in LPS biosynthesis
COG categoryM
Max annot lvl1236|Gammaproteobacteria
EggNOG OGsCOG3306@1|root,COG3306@2|Bacteria,1R2K2@1224|Proteobacteria,1T5RR@1236|Gammaproteobacteria
Evalue1.68e-20
Seed ortholog1524467.IV04_02140
Hectar predicted targeting categoryother localisation
TranscriptId170048
TrackFilteredModels1
ProteinId169726
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|169726gene_9642Tribonema minus UTEX_B_3156 geneContig_66 95053..96102 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_9642_1exon_9642_1Tribonema minus UTEX_B_3156 exonContig_66 95053..96102 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_9642CDS_9642Tribonema minus UTEX_B_3156 CDSContig_66 95053..96102 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|169726Trimin1|169726|e_gw1.66.5.1Tribonema minus UTEX_B_3156 polypeptideContig_66 95053..96102 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_9642 ID=mRNA_9642|Name=jgi.p|Trimin1|169726|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1050bp|location=Sequence derived from alignment at Contig_66:95053..96102+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGTCGGTTCTCGTACAGGAGACATCGCCGAGACATGCGCTAGTTGTTCA
CATCCTGTACAGAGGCGAGTGCTTCCTCGAGACAGCCGAGGGCCTGCATG
ATGTGCTGCAGAGATTGGGGCTTGCATCCACCATCAGTGCTTTGGCGCCG
GGCGCAGAGGCCACGCCGCCCTGGTCAGAAGCCTTCAGCAACCATTTGCT
GCTTTTCATCGTGTTAGGCGGACACCTCTTTGAAGAGCTGCCGACCACAG
GCATTTTGGTGAATTATGAGCAGATGTCCAGCCCTTGGATGACGGAAACT
TACTGCGCGGCTCTCAGGTCAGCTGCCGTCGTATGCGACTTCAGCGATCG
AAACTTGAGCACGCTCGTACAGAGCCTACAGCTGCGGCAGCCGTGCTACA
CACTGCCCGTATACGTGCCCGCCGACGCCTTCCAGATCCTTCCCGGCGCA
GGCAGCAGCGACAACGAAGGCGATGACTGCGTCGACGTGCTCTTCTATGG
CTGCGCAAACGCGCGCCGCACAGAGATGCTGCGGCGCCTGAGCGCAGCGG
GCCTTCGCGCAGAGTTCCATTTTGAGTACGCCCTCTTCGGGCCGGAGCGC
GCGCGGGCGATGGCGCGCGCACGCGTCGTGCTGAACCTGCACTACTACGA
GGACGCTGCGCTGGAGGTGCACAGGCTTGCGCCGCTGCTGGCGGCGGGCT
GCTGCGTCGTTTCGGAGCCCAGCGCGGACCAGGAGCTAGATGCGCGCTTC
CGCAGCGCCGTTGCATTTGCGCGGTACGACGACATACCGGCTGTCGTATC
ATGGCTATCGCGAAGCGACGACAGCAGCGGTGGCGGCAGCAGGAGCGGCA
GGAGCGGCGCAGACTGGCCTGGCGGCTGGGGGTGCAGCGGCGGCGGCGGC
AGCAGCGGCAGTTCCGCAAGGCGTACGCTGCAGGCTGCGGCACGCAAGCT
GGCAGTAGCCATGCAGGACGACATCTCGCCACTGAGCAATGCTGTTGCTG
CACTGGCAGCAACAGCGGTGGCGCGAGCAACGGAGTCGCAGGCTTTGTGA
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protein sequence of jgi.p|Trimin1|169726

>Trimin1|169726|e_gw1.66.5.1 ID=Trimin1|169726|e_gw1.66.5.1|Name=jgi.p|Trimin1|169726|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=350bp
MSVLVQETSPRHALVVHILYRGECFLETAEGLHDVLQRLGLASTISALAP
GAEATPPWSEAFSNHLLLFIVLGGHLFEELPTTGILVNYEQMSSPWMTET
YCAALRSAAVVCDFSDRNLSTLVQSLQLRQPCYTLPVYVPADAFQILPGA
GSSDNEGDDCVDVLFYGCANARRTEMLRRLSAAGLRAEFHFEYALFGPER
ARAMARARVVLNLHYYEDAALEVHRLAPLLAAGCCVVSEPSADQELDARF
RSAVAFARYDDIPAVVSWLSRSDDSSGGGSRSGRSGADWPGGWGCSGGGG
SSGSSARRTLQAAARKLAVAMQDDISPLSNAVAALAATAVARATESQAL*
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mRNA from alignment at Contig_66:95053..96102+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_9642 ID=mRNA_9642|Name=jgi.p|Trimin1|169726|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1050bp|location=Sequence derived from alignment at Contig_66:95053..96102+ (Tribonema minus UTEX_B_3156 )
ATGTCGGTTCTCGTACAGGAGACATCGCCGAGACATGCGCTAGTTGTTCA CATCCTGTACAGAGGCGAGTGCTTCCTCGAGACAGCCGAGGGCCTGCATG ATGTGCTGCAGAGATTGGGGCTTGCATCCACCATCAGTGCTTTGGCGCCG GGCGCAGAGGCCACGCCGCCCTGGTCAGAAGCCTTCAGCAACCATTTGCT GCTTTTCATCGTGTTAGGCGGACACCTCTTTGAAGAGCTGCCGACCACAG GCATTTTGGTGAATTATGAGCAGATGTCCAGCCCTTGGATGACGGAAACT TACTGCGCGGCTCTCAGGTCAGCTGCCGTCGTATGCGACTTCAGCGATCG AAACTTGAGCACGCTCGTACAGAGCCTACAGCTGCGGCAGCCGTGCTACA CACTGCCCGTATACGTGCCCGCCGACGCCTTCCAGATCCTTCCCGGCGCA GGCAGCAGCGACAACGAAGGCGATGACTGCGTCGACGTGCTCTTCTATGG CTGCGCAAACGCGCGCCGCACAGAGATGCTGCGGCGCCTGAGCGCAGCGG GCCTTCGCGCAGAGTTCCATTTTGAGTACGCCCTCTTCGGGCCGGAGCGC GCGCGGGCGATGGCGCGCGCACGCGTCGTGCTGAACCTGCACTACTACGA GGACGCTGCGCTGGAGGTGCACAGGCTTGCGCCGCTGCTGGCGGCGGGCT GCTGCGTCGTTTCGGAGCCCAGCGCGGACCAGGAGCTAGATGCGCGCTTC CGCAGCGCCGTTGCATTTGCGCGGTACGACGACATACCGGCTGTCGTATC ATGGCTATCGCGAAGCGACGACAGCAGCGGTGGCGGCAGCAGGAGCGGCA GGAGCGGCGCAGACTGGCCTGGCGGCTGGGGGTGCAGCGGCGGCGGCGGC AGCAGCGGCAGTTCCGCAAGGCGTACGCTGCAGGCTGCGGCACGCAAGCT GGCAGTAGCCATGCAGGACGACATCTCGCCACTGAGCAATGCTGTTGCTG CACTGGCAGCAACAGCGGTGGCGCGAGCAACGGAGTCGCAGGCTTTGTGA
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Coding sequence (CDS) from alignment at Contig_66:95053..96102+

>mRNA_9642 ID=mRNA_9642|Name=jgi.p|Trimin1|169726|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1050bp|location=Sequence derived from alignment at Contig_66:95053..96102+ (Tribonema minus UTEX_B_3156 )
ATGTCGGTTCTCGTACAGGAGACATCGCCGAGACATGCGCTAGTTGTTCA
CATCCTGTACAGAGGCGAGTGCTTCCTCGAGACAGCCGAGGGCCTGCATG
ATGTGCTGCAGAGATTGGGGCTTGCATCCACCATCAGTGCTTTGGCGCCG
GGCGCAGAGGCCACGCCGCCCTGGTCAGAAGCCTTCAGCAACCATTTGCT
GCTTTTCATCGTGTTAGGCGGACACCTCTTTGAAGAGCTGCCGACCACAG
GCATTTTGGTGAATTATGAGCAGATGTCCAGCCCTTGGATGACGGAAACT
TACTGCGCGGCTCTCAGGTCAGCTGCCGTCGTATGCGACTTCAGCGATCG
AAACTTGAGCACGCTCGTACAGAGCCTACAGCTGCGGCAGCCGTGCTACA
CACTGCCCGTATACGTGCCCGCCGACGCCTTCCAGATCCTTCCCGGCGCA
GGCAGCAGCGACAACGAAGGCGATGACTGCGTCGACGTGCTCTTCTATGG
CTGCGCAAACGCGCGCCGCACAGAGATGCTGCGGCGCCTGAGCGCAGCGG
GCCTTCGCGCAGAGTTCCATTTTGAGTACGCCCTCTTCGGGCCGGAGCGC
GCGCGGGCGATGGCGCGCGCACGCGTCGTGCTGAACCTGCACTACTACGA
GGACGCTGCGCTGGAGGTGCACAGGCTTGCGCCGCTGCTGGCGGCGGGCT
GCTGCGTCGTTTCGGAGCCCAGCGCGGACCAGGAGCTAGATGCGCGCTTC
CGCAGCGCCGTTGCATTTGCGCGGTACGACGACATACCGGCTGTCGTATC
ATGGCTATCGCGAAGCGACGACAGCAGCGGTGGCGGCAGCAGGAGCGGCA
GGAGCGGCGCAGACTGGCCTGGCGGCTGGGGGTGCAGCGGCGGCGGCGGC
AGCAGCGGCAGTTCCGCAAGGCGTACGCTGCAGGCTGCGGCACGCAAGCT
GGCAGTAGCCATGCAGGACGACATCTCGCCACTGAGCAATGCTGTTGCTG
CACTGGCAGCAACAGCGGTGGCGCGAGCAACGGAGTCGCAGGCTTTGTGA
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