mRNA_9637 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|169764
Unique Name	mRNA_9637
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

[Close]

BLAST of jgi.p|Trimin1|169764 vs. uniprot
Match: A0A835YM82_9STRA (Putative dynein intermediate chain n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YM82_9STRA)

HSP 1 Score: 1290 bits (3337), Expect = 0.000e+0
Identity = 658/658 (100.00%), Postives = 658/658 (100.00%), Query Frame = 1

Query:    1 MRGSIGGGNPLNALEDEDLYQEPVRQIIKPLNQLDLSEAELREEHTRVLTATDPNVPNNVTKYNYKDRMYKIDPPGPGDHLAVHFSMDGCLLFRELDEAKQQLAYMEKKREXXXXXXXXXXXXXXXXXXXXPEADGGAXXKGGKNQFNYSERAAQTFTNPMRDRGVATEPPPMVNFSSTIAQWEIYDHYMQEYAASQQEAEHEAARRGIRRPDGGXXXXXXXXXGGDDTVHSAKMGGVLKMLERMANQNAEDEIFQDFKYWEDASDQFREGEGSLLPLWRFSTERTKKKQVTALCWNPRYPDLFAVGYGSYDFLRQGSGLVACFSLKNTGSPEYTLATESGVMCLDFHPLHHSLLAVGCYDGTVMVFDVRQRRGAPIYSSSIKTGKHTDPVWQVHWQCDEQPKELNFYSVSSDGRVANWIMSKNELKMEPVMQLKLVGGAREEPEVRHPLNGLAGGCCFDFNRHAEHLFIVGTEEGRVHKCSKAYSGQYLQTYEGHNMAVYALRWNPFHPRVFLSCSADWTVKLWDHALPQPVMSFDLGNAVGDVCWSPYSATVFAAVTSDGKVHVFDLAQNKHEPICEQKVVKRSRLTHVCFNLRDPIIIVGDDRGGVNSLKLSPNLRKVHEPAGEDGKLSARASAQAQADNMEKLLQVADTKPTPA 1974
            MRGSIGGGNPLNALEDEDLYQEPVRQIIKPLNQLDLSEAELREEHTRVLTATDPNVPNNVTKYNYKDRMYKIDPPGPGDHLAVHFSMDGCLLFRELDEAKQQLAYMEKKREXXXXXXXXXXXXXXXXXXXXPEADGGAXXKGGKNQFNYSERAAQTFTNPMRDRGVATEPPPMVNFSSTIAQWEIYDHYMQEYAASQQEAEHEAARRGIRRPDGGXXXXXXXXXGGDDTVHSAKMGGVLKMLERMANQNAEDEIFQDFKYWEDASDQFREGEGSLLPLWRFSTERTKKKQVTALCWNPRYPDLFAVGYGSYDFLRQGSGLVACFSLKNTGSPEYTLATESGVMCLDFHPLHHSLLAVGCYDGTVMVFDVRQRRGAPIYSSSIKTGKHTDPVWQVHWQCDEQPKELNFYSVSSDGRVANWIMSKNELKMEPVMQLKLVGGAREEPEVRHPLNGLAGGCCFDFNRHAEHLFIVGTEEGRVHKCSKAYSGQYLQTYEGHNMAVYALRWNPFHPRVFLSCSADWTVKLWDHALPQPVMSFDLGNAVGDVCWSPYSATVFAAVTSDGKVHVFDLAQNKHEPICEQKVVKRSRLTHVCFNLRDPIIIVGDDRGGVNSLKLSPNLRKVHEPAGEDGKLSARASAQAQADNMEKLLQVADTKPTPA
Sbjct:    1 MRGSIGGGNPLNALEDEDLYQEPVRQIIKPLNQLDLSEAELREEHTRVLTATDPNVPNNVTKYNYKDRMYKIDPPGPGDHLAVHFSMDGCLLFRELDEAKQQLAYMEKKREXXXXXXXXXXXXXXXXXXXXPEADGGAXXKGGKNQFNYSERAAQTFTNPMRDRGVATEPPPMVNFSSTIAQWEIYDHYMQEYAASQQEAEHEAARRGIRRPDGGXXXXXXXXXGGDDTVHSAKMGGVLKMLERMANQNAEDEIFQDFKYWEDASDQFREGEGSLLPLWRFSTERTKKKQVTALCWNPRYPDLFAVGYGSYDFLRQGSGLVACFSLKNTGSPEYTLATESGVMCLDFHPLHHSLLAVGCYDGTVMVFDVRQRRGAPIYSSSIKTGKHTDPVWQVHWQCDEQPKELNFYSVSSDGRVANWIMSKNELKMEPVMQLKLVGGAREEPEVRHPLNGLAGGCCFDFNRHAEHLFIVGTEEGRVHKCSKAYSGQYLQTYEGHNMAVYALRWNPFHPRVFLSCSADWTVKLWDHALPQPVMSFDLGNAVGDVCWSPYSATVFAAVTSDGKVHVFDLAQNKHEPICEQKVVKRSRLTHVCFNLRDPIIIVGDDRGGVNSLKLSPNLRKVHEPAGEDGKLSARASAQAQADNMEKLLQVADTKPTPA 658

[Close]

BLAST of jgi.p|Trimin1|169764 vs. uniprot
Match: D7FZ08_ECTSI (Putative, Dynein intermediate chain n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ08_ECTSI)

HSP 1 Score: 941 bits (2432), Expect = 0.000e+0
Identity = 481/632 (76.11%), Postives = 540/632 (85.44%), Query Frame = 1

Query:   70 VRQIIKPLNQLDLSEAELREEHTRVLTATDPNVPNNVTKYNYKDRMYKIDPPGPGDHLAVHFSMDGCLLFRELDEAKQQLAYMEKKREXXXXXXXXXXXXXXXXXXXXPEADGGAXXKGGKNQFNYSERAAQTFTNPMRDRGVATEPPPMVNFSSTIAQWEIYDHYMQEYAASQQEAEHEAARRGIRRPDGGXXXXXXXXXGGDDTVHSAKMGGVLKMLERMANQNAEDEIFQDFKYWEDASDQFREGEGSLLPLWRFSTERTKKKQVTALCWNPRYPDLFAVGYGSYDFLRQGSGLVACFSLKNTGSPEYTLATESGVMCLDFHPLHHSLLAVGCYDGTVMVFDVRQRRGAPIYSSSIKTGKHTDPVWQVHWQCDEQPKELNFYSVSSDGRVANWIMSKNELKMEPVMQLKLVGGAREEPEVRHPLNGLAGGCCFDFNRHAEHLFIVGTEEGRVHKCSKAYSGQYLQTYEGHNMAVYALRWNPFHPRVFLSCSADWTVKLWDHALPQPVMSFDLGNAVGDVCWSPYSATVFAAVTSDGKVHVFDLAQNKHEPICEQKVVKRSRLTHVCFNLRDPIIIVGDDRGGVNSLKLSPNLRKVHEPAGEDGKLSARASAQAQADNMEKLLQVADTKP 1965
            + ++++P NQL LSE E++EEHTRVLTA DPNVPNN++KYNYKD MYKIDPPGPGDHLA+H ++DG  LFRE DEAK Q    E    XXXXXXXXXXXXXXXXXXXX       XX  GKNQFNYSERAAQTF NPMR+RGV TEPPPM++F +T+AQWEIYD YM EY+A  Q AE E   +        XXXXXXXXX  DD VHSAKMGG LK+LERM NQNAEDEIFQDFKYWEDASD FREGEGSLLPLWRFST+RTK+KQVTAL WNP+YPDLFA  YGSYDF+RQGSG+V CFSLKNT  PEYT  TESGVMCLDFHP+H+SLLAVGC+DGTVMVFDVR +   PIYSSSIKTGKHTDPVWQV+WQ D+QPKELNF+S+SSDGRVA+W+MSKNELKMEPVMQLKLV   +++PE    L+GLAGGCCFDFNRH+EHLF+VGTEEG++HKCSKAYSGQYL+TYEGHNMAVY LRWNPFHPRVF+SCSADWTVKLWDH++P P+MSFDLGNAVGDV WSPYS+TV AAVTSDGKVHVFDLA+NKHEP+CEQKVVKRS+LTHVCFN +DPIIIVGDDRGGVNSLKLSPNLRKVHEP  ++G +      + Q D M++LL VADTKP
Sbjct:    1 MEKVVRPANQLQLSETEMKEEHTRVLTANDPNVPNNISKYNYKDHMYKIDPPGPGDHLAMHLAIDGWALFREGDEAKLQATAEEXXXXXXXXXXXXXXXXXXXXXXXXXXXX---XXXXGKNQFNYSERAAQTFNNPMRERGVVTEPPPMLSFRNTVAQWEIYDSYMAEYSA--QMAEQEVENKXXXXXXXXXXXXXXXXXXEDDMVHSAKMGGALKILERMVNQNAEDEIFQDFKYWEDASDHFREGEGSLLPLWRFSTDRTKRKQVTALAWNPQYPDLFAAAYGSYDFMRQGSGMVCCFSLKNTSHPEYTFGTESGVMCLDFHPVHNSLLAVGCHDGTVMVFDVRHKANRPIYSSSIKTGKHTDPVWQVYWQSDDQPKELNFFSISSDGRVASWVMSKNELKMEPVMQLKLVNTIKDDPE-ETSLSGLAGGCCFDFNRHSEHLFLVGTEEGKIHKCSKAYSGQYLETYEGHNMAVYTLRWNPFHPRVFVSCSADWTVKLWDHSVPYPIMSFDLGNAVGDVFWSPYSSTVMAAVTSDGKVHVFDLAENKHEPLCEQKVVKRSKLTHVCFNKQDPIIIVGDDRGGVNSLKLSPNLRKVHEPRDDEGNVVEHDPIKLQVDKMDRLLTVADTKP 626

[Close]

BLAST of jgi.p|Trimin1|169764 vs. uniprot
Match: A0A7S2CDX8_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CDX8_9STRA)

HSP 1 Score: 919 bits (2376), Expect = 0.000e+0
Identity = 452/652 (69.33%), Postives = 525/652 (80.52%), Query Frame = 1

Query:   40 LEDEDLYQEPVRQIIKPLNQL-DLSEAELREEHTRVLTATDPNVPNNVTKYNYKDRMYKIDPPGPGDHLAVHFSMDGCLLFRELDEAKQQLAYMEKKREXXXXXXXXXXXXXXXXXXXXPEADGGAXXKGGKNQFNYSERAAQTFTNPMRDRGVATEPPPMVNFSSTIAQWEIYDHYMQEYAASQQEAEHEAARRGIRRPDGGXXXXXXXXX---------GGDDTVHSAKMGGVLKMLERMANQNAEDEIFQDFKYWEDASDQFREGEGSLLPLWRFSTERTKKKQVTALCWNPRYPDLFAVGYGSYDFLRQGSGLVACFSLKNTGSPEYTLATESGVMCLDFHPLHHSLLAVGCYDGTVMVFDVRQRRGAPIYSSSIKTGKHTDPVWQVHWQCDEQPKELNFYSVSSDGRVANWIMSKNELKMEPVMQLKLVGGAREEPEVRHPLNGLAGGCCFDFNRHAEHLFIVGTEEGRVHKCSKAYSGQYLQTYEGHNMAVYALRWNPFHPRVFLSCSADWTVKLWDHALPQPVMSFDLGNAVGDVCWSPYSATVFAAVTSDGKVHVFDLAQNKHEPICEQKVVKRSRLTHVCFNLRDPIIIVGDDRGGVNSLKLSPNLRKVHEPAGEDGKLSARASAQAQADNMEKLLQVADTKP 1965
            +ED+D+YQEP +QII+P NQL +LSE EL+EEHTRVLTA DPN  NN+TKYNYKDR YK+DP G GDHL +HFS+DGC+L ++  +AK+Q AY  +K+E  XXXXXXXX           EA+     + GKNQFNYSERAAQTF NP+R+RGVAT+PPP+V FS+T++QW+IYD YM +Y  S Q AE E  +   ++   G                    DD VHS KM   LK+LERMANQNAEDEIFQDFKYWEDASDQFREGEGSLLPLWRF T+RTK+KQVTAL WNP+YPDLFAVGYGSYDF+RQGSG++ C+SLKNT  PEY  +TESGVMC++FHP H SLLAVGCYDGTVMV+DVR +   PIY SSIKTGKHTDPVWQV WQ ++  KELNF+S+SSDGRVANWIMSKNELKMEPVMQLKLV   +++PE    L+GLAGGCCFDFNR +EHLFIVGTEEG++HKCSKAYSGQYL+TY GH+MAVY +RWNPFHPRVF+SCSADWTVKLWDH +  P+MSFDLGNAVGDV WSPYS+T+FAAVTSDGKVHVFDLA+NKHEP+CEQKVVKR++LTHV FN  +PIIIVGDDRGGVNSLKLSPNLRKVHEP  E+G +      Q Q D M++LL  ADTKP
Sbjct:   38 VEDDDMYQEPYKQIIRPHNQLTNLSETELKEEHTRVLTANDPNKANNITKYNYKDRCYKLDPEGAGDHLKIHFSLDGCVLHKDSQDAKEQEAYEAQKKEFEXXXXXXXXQQAAEAGEDDMEAE---TQESGKNQFNYSERAAQTFNNPLRERGVATKPPPVVGFSATVSQWDIYDSYMNDY--SNQMAEQEILKNAEKKKGAGGGQREATFDEPTQATAKGSKDDMVHSVKMSAALKILERMANQNAEDEIFQDFKYWEDASDQFREGEGSLLPLWRFQTDRTKRKQVTALGWNPKYPDLFAVGYGSYDFMRQGSGMICCYSLKNTNHPEYIFSTESGVMCINFHPNHSSLLAVGCYDGTVMVYDVRNKMNRPIYMSSIKTGKHTDPVWQVFWQEEDLAKELNFFSISSDGRVANWIMSKNELKMEPVMQLKLVSTVKDDPE-ETSLSGLAGGCCFDFNRVSEHLFIVGTEEGKIHKCSKAYSGQYLETYIGHHMAVYTIRWNPFHPRVFISCSADWTVKLWDHNVAHPIMSFDLGNAVGDVAWSPYSSTIFAAVTSDGKVHVFDLAENKHEPLCEQKVVKRAKLTHVNFNQVEPIIIVGDDRGGVNSLKLSPNLRKVHEPYDEEGVMIEHDPVQLQIDKMDRLLAAADTKP 683

[Close]

BLAST of jgi.p|Trimin1|169764 vs. uniprot
Match: F0YGU7_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YGU7_AURAN)

HSP 1 Score: 865 bits (2236), Expect = 3.320e-310
Identity = 421/643 (65.47%), Postives = 491/643 (76.36%), Query Frame = 1

Query:   55 LYQEPVRQIIKPLNQLDLSEAELREEHTRVLTATDPNVPNNVTKYNYKDRMYKIDPPGPGDHLAVHFSMDGCLLFRELDEAKQQLAYMEKKREXXXXXXXXXXXXXXXXXXXXPEADGGAXXKGGKNQFNYSERAAQTFTNPMRDRGVATEPPPMVNFSSTIAQWEIYDHYMQEYAASQQEAE----HEAARRGIRRPDGGXXXXXXXXXGGDDTVHSAKMGGVLKMLERMANQNAEDEIFQDFKYWEDASDQFREGEGSLLPLWRFSTERTKKKQVTALCWNPRYPDLFAVGYGSYDFLRQGSGLVACFSLKNTGSPEYTLATESGVMCLDFHPLHHSLLAVGCYDGTVMVFDVRQRRGAPIYSSSIKTGKHTDPVWQVHWQCDEQPKELNFYSVSSDGRVANWIMSKNELKMEPVMQLKLVGGAREEPEVRHPLNGLAGGCCFDFNRHAEHLFIVGTEEGRVHKCSKAYSGQYLQTYEGHNMAVYALRWNPFHPRVFLSCSADWTVKLWDHALPQPVMSFDLGNAVGDVCWSPYSATVFAAVTSDGKVHVFDLAQNKHEPICEQKVVKRSRLTHVCFNLRDPIIIVGDDRGGVNSLKLSPNLRKVHEPAGEDGK--LSARASAQAQADNMEKLLQVADTKP 1965
            +YQEP R I  P NQL L+EAEL+EEHTRVLTA DPNVPNN+TKYNY  R YK+DPPG  D+LA+HFS++GC L R+ +EAK+Q  Y  K +E                     + D     +  KNQFNYSERAAQTF NP+R+R ++T+PP +VNFS T++QWEIYD YM +YA    E E     E  + GI     G           DD VHS +MG  LK+LERM NQNA+DEIFQDFKYWEDASD FR+GEGSLLPLWRF TER+K+KQVTAL WNP+YPDLF+VGYGSYDF+RQGSG+V CFSLKNT  PEYT  TESGVMCL+FHP H SLLAVGCYDG VMV+DVR +   PIY+SSIKTGKHTDPVWQV WQ ++  KELNF+S+SSDGRVANW MSKNELKMEPVMQLKLV  ++++PE    L+GLAGGCCFDFNR +EHLFIVGTEEG++HKCSKAYSGQYL+TY GH+MAVY +RWNPFHPRVF+SCSADWTVKLWDH +P  +MSFDLGNAVGDV             TSDGKVH+FDLA+NKHEP+CEQKVVKR++LTHV FN RDPI+IVGDDRGG NSLKLSPNLR +H+P GE+    L+   + Q Q DNM++LL   DTKP
Sbjct:    1 MYQEPYRLIKVPANQLKLTEAELKEEHTRVLTANDPNVPNNITKYNYHSRCYKVDPPGGQDNLAIHFSLEGCSLHRDSNEAKEQATYYLKYKEDLAEAKKLIVEEHGK------DEDEDDLFENRKNQFNYSERAAQTFNNPLRERCISTKPPAVVNFSGTVSQWEIYDRYMSDYAMQMAEQELLKSQEKKKTGIGSTSNGGLQNTTVSKE-DDMVHSQRMGNALKILERMVNQNADDEIFQDFKYWEDASDAFRDGEGSLLPLWRFHTERSKRKQVTALAWNPKYPDLFSVGYGSYDFMRQGSGMVCCFSLKNTSYPEYTFTTESGVMCLNFHPEHCSLLAVGCYDGIVMVYDVRHKGNRPIYASSIKTGKHTDPVWQVQWQIEDLAKELNFFSISSDGRVANWTMSKNELKMEPVMQLKLVSTSKDDPE-ETLLSGLAGGCCFDFNRVSEHLFIVGTEEGKIHKCSKAYSGQYLETYLGHHMAVYTIRWNPFHPRVFISCSADWTVKLWDHNVPTAIMSFDLGNAVGDVAXXXXXXXXXXXXTSDGKVHIFDLAENKHEPLCEQKVVKRAKLTHVVFNQRDPILIVGDDRGGCNSLKLSPNLRLIHDPLGEEASAGLTKEVTTQRQIDNMDRLLASVDTKP 635

[Close]

BLAST of jgi.p|Trimin1|169764 vs. uniprot
Match: K3X8Q8_GLOUD (Uncharacterized protein n=2 Tax=Pythiaceae TaxID=4782 RepID=K3X8Q8_GLOUD)

HSP 1 Score: 867 bits (2239), Expect = 2.290e-309
Identity = 432/675 (64.00%), Postives = 523/675 (77.48%), Query Frame = 1

Query:   40 LEDEDLYQEPVRQIIKPLNQLDLSEAELREEHTRVLTATDPNVPNNVTKYNYKDRMYKIDPPGPGDHLAVHFSMDGCLLFRELDEAKQQLAYMEKKREXXXXXXXXXXXXXXXXXXXXPEA--DGGAXXKGGKNQFNYSERAAQTFTNPMRDRGVATEPPPMVNFSSTIAQWEIYDHYMQEYAASQQEA---EHEAARRGIRRPDGGXXXXXXXXXG-------------------GDDTVHSAKMGGVLKMLERMANQNAEDEIFQDFKYWEDASDQFREGEGSLLPLWRFSTERTKKKQVTALCWNPRYPDLFAVGYGSYDFLRQGSGLVACFSLKNTGSPEYTLATESGVMCLDFHPLHHSLLAVGCYDGTVMVFDVRQRRGAPIYSSSIKTGKHTDPVWQVHWQCDEQPKELNFYSVSSDGRVANWIMSKNELKMEPVMQLKLVGGAREEPEVRHPLNGLAGGCCFDFNRHAEHLFIVGTEEGRVHKCSKAYSGQYLQTYEGHNMAVYALRWNPFHPRVFLSCSADWTVKLWDHALPQPVMSFDLGNAVGDVCWSPYSATVFAAVTSDGKVHVFDLAQNKHEPICEQKVVKRSRLTHVCFNLRDPIIIVGDDRGGVNSLKLSPNLRKVHEPAGEDGKLSA----------RASAQAQADNMEKLLQVADTK 1962
            L++ D Y EPV++++ P NQL LSEAEL+EE +RVLTA DPNVPNN+TKYNYK+R YK+DPPGPGDHL VH   DG ++ ++ ++AK Q A+ +K+ E          XXXXXXXX   E   +     + GKNQFNYSERAAQT+TNP+R R V TEPPP+V+F +T+ QWEIYD +M  Y   Q+E    +  A ++     DG     XXXXX                    GDD VHSA MG  L+++ERM NQNA+DEIF DFKYWEDASDQFREGEGSLLPLWRF+++R KKKQVTA+CWNPR+ DLFA+GYGSYDFL+QGSG+V CFSLKN+  PE+T  TESGVMCLDFHP H +LLAVGCYDGTV+V+DVR +   PIY+S+IKTGKHTDPVWQV+WQ ++  KELNFYS+SSDGRVANWIMSKNELKMEPVMQLK+V  A+++PE    L+GLAGGCCFDFNR +EHLF+VGTEEG++HKCSKAYSGQYL+TY GH+MAVY++RWNPFH R FLSCSADWTVKLWDH +P P+MSFDLGNAVGDV W+PYS+TVFAAVTSDGKVHVFDLA+NK+EP+CEQKVVKR++LTHV FN +DPII+VGDDRGGVNSLKLSPNLRK+   + +DG  S+          +A  + + + ++KLL   D K
Sbjct:   44 LDEMDAYHEPVKKVVIPENQLKLSEAELKEEFSRVLTANDPNVPNNITKYNYKERTYKVDPPGPGDHLYVHLCADGSMIHKDSEDAKTQAAFDQKRAEEEKEARELAIXXXXXXXXAKGEKIDEASLQFESGKNQFNYSERAAQTYTNPLRQRSVETEPPPVVSFMATVTQWEIYDTFMDAYEQHQREQIQLQKVAQKKEKDEKDGSEVLVXXXXXXXXXXXXXXXXXXXXXSKGKGDDMVHSAAMGKTLRIIERMVNQNADDEIFHDFKYWEDASDQFREGEGSLLPLWRFASDRAKKKQVTAVCWNPRFADLFAIGYGSYDFLKQGSGVVCCFSLKNSSHPEFTFTTESGVMCLDFHPQHAALLAVGCYDGTVIVYDVRNKANRPIYTSTIKTGKHTDPVWQVNWQEEDLAKELNFYSISSDGRVANWIMSKNELKMEPVMQLKIVSTAKDDPE-ESSLSGLAGGCCFDFNRFSEHLFVVGTEEGKLHKCSKAYSGQYLETYVGHHMAVYSVRWNPFHERAFLSCSADWTVKLWDHNVPDPIMSFDLGNAVGDVAWAPYSSTVFAAVTSDGKVHVFDLAENKNEPLCEQKVVKRAKLTHVAFNTQDPIILVGDDRGGVNSLKLSPNLRKITTGSEDDGSSSSSSAPADLRNVKARFKKEFEKIDKLLSSNDNK 717

[Close]

BLAST of jgi.p|Trimin1|169764 vs. uniprot
Match: H3H1T8_PHYRM (Uncharacterized protein n=18 Tax=Phytophthora TaxID=4783 RepID=H3H1T8_PHYRM)

HSP 1 Score: 862 bits (2228), Expect = 3.150e-307
Identity = 431/660 (65.30%), Postives = 508/660 (76.97%), Query Frame = 1

Query:   10 SIGGGNPLNALEDEDLYQEPVRQIIKPLNQLDLSEAELREEHTRVLTATDPNVPNNVTKYNYKDRMYKIDPPGPGDHLAVHFSMDGCLLFRELDEAKQQLA----YMEKKREXXXXXXXXXXXXXXXXXXXXPEADGGAXXKGGKNQFNYSERAAQTFTNPMRDRGVATEPPPMVNFSSTIAQWEIYDHYMQEYAASQQEA---EHEAARRGIRRPDGGXXXXXXXXXG--------------------GDDTVHSAKMGGVLKMLERMANQNAEDEIFQDFKYWEDASDQFREGEGSLLPLWRFSTERTKKKQVTALCWNPRYPDLFAVGYGSYDFLRQGSGLVACFSLKNTGSPEYTLATESGVMCLDFHPLHHSLLAVGCYDGTVMVFDVRQRRGAPIYSSSIKTGKHTDPVWQVHWQCDEQPKELNFYSVSSDGRVANWIMSKNELKMEPVMQLKLVGGAREEPEVRHPLNGLAGGCCFDFNRHAEHLFIVGTEEGRVHKCSKAYSGQYLQTYEGHNMAVYALRWNPFHPRVFLSCSADWTVKLWDHALPQPVMSFDLGNAVGDVCWSPYSATVFAAVTSDGKVHVFDLAQNKHEPICEQKVVKRSRLTHVCFNLRDPIIIVGDDRGGVNSLKLSPNLRKVHEPAGEDGKLSARAS 1908
            S+ G  P N  ED D Y EPV++I+ P NQL LS  EL EE +RVLTA DPNVPNN+TKYNYK+R YK+DPPGPGDHL VH   DG ++ +E ++AK Q A    Y E+++E                     EA      + GKNQFNYSERAAQT+TNP R R V TEPPP+V+F +T+ QWEIYD +M  Y   Q+E    +  A ++     DG XXXXXXXXX                     GDD VHSA MG  L+++ERMANQNA+DEIF DFKYWEDASDQFREGEGSLLPLWRFS+ER KKKQVTA+CWNPR+ DLFA+G+GSYDFL+QGSG++ C+SLKN   PE+T  TESGVMCLDFHP H +LLAVGCYDGTV+V+DVR +   PIY ++IKTGKHTDPVWQV+WQ ++  KELNFYS+SSDGRVANWI+SKNELKMEPVMQLKLV  A+++PE    L+GLAGGCCFDFNR +EHLFIVGTEEG++HKCSKAYSGQYL+TY GH+MAVYA+RWNPFH R FLSCSADWTVKLWDH LP+P+MSFDLGNAVGDV W+PYS+TVFAAVTSDGKVHVFDLA+NK+EP+CEQKVVKR++LTH+ FN +DPI++VGDDRGGVNSLKLSPNLRK+     EDG  +A  S
Sbjct:   57 SLSGAGPDN--EDMDAYHEPVKRIVIPDNQLKLSPQELNEEFSRVLTANDPNVPNNITKYNYKERTYKVDPPGPGDHLYVHLCCDGSMIHKESEDAKTQAAFDQKYAEEEKETRELAIKQAKEEAEAKGEKIDEA--ALQFESGKNQFNYSERAAQTYTNPSRKRAVETEPPPVVSFMATVTQWEIYDTFMDAYEQHQREQIQLQKVAQKKDKDEKDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGKGDDMVHSAAMGKTLRIIERMANQNADDEIFNDFKYWEDASDQFREGEGSLLPLWRFSSERAKKKQVTAVCWNPRFGDLFAIGFGSYDFLKQGSGVICCYSLKNASHPEFTFTTESGVMCLDFHPQHAALLAVGCYDGTVLVYDVRSKTNRPIYVATIKTGKHTDPVWQVNWQEEDLAKELNFYSISSDGRVANWILSKNELKMEPVMQLKLVAAAKDDPE-EASLSGLAGGCCFDFNRFSEHLFIVGTEEGKLHKCSKAYSGQYLETYAGHHMAVYAVRWNPFHERAFLSCSADWTVKLWDHNLPEPIMSFDLGNAVGDVAWAPYSSTVFAAVTSDGKVHVFDLAENKNEPLCEQKVVKRAKLTHLAFNSQDPIVLVGDDRGGVNSLKLSPNLRKIIGSGDEDGGPAANGS 711

[Close]

BLAST of jgi.p|Trimin1|169764 vs. uniprot
Match: A0A2D4BVK3_PYTIN (Dynein intermediate chain 2 n=2 Tax=Pythium TaxID=4797 RepID=A0A2D4BVK3_PYTIN)

HSP 1 Score: 860 bits (2221), Expect = 3.050e-306
Identity = 421/635 (66.30%), Postives = 504/635 (79.37%), Query Frame = 1

Query:   43 EDEDLYQEPVRQIIKPLNQLDLSEAELREEHTRVLTATDPNVPNNVTKYNYKDRMYKIDPPGPGDHLAVHFSMDGCLLFRELDEAKQQLAYMEKKREXXXXXXXXXXXXXXXXXXXXPEA--DGGAXXKGGKNQFNYSERAAQTFTNPMRDRGVATEPPPMVNFSSTIAQWEIYDHYMQEYAASQQEA---EHEAARRGIRRPDGGXXXXXXXXXG----------------GDDTVHSAKMGGVLKMLERMANQNAEDEIFQDFKYWEDASDQFREGEGSLLPLWRFSTERTKKKQVTALCWNPRYPDLFAVGYGSYDFLRQGSGLVACFSLKNTGSPEYTLATESGVMCLDFHPLHHSLLAVGCYDGTVMVFDVRQRRGAPIYSSSIKTGKHTDPVWQVHWQCDEQPKELNFYSVSSDGRVANWIMSKNELKMEPVMQLKLVGGAREEPEVRHPLNGLAGGCCFDFNRHAEHLFIVGTEEGRVHKCSKAYSGQYLQTYEGHNMAVYALRWNPFHPRVFLSCSADWTVKLWDHALPQPVMSFDLGNAVGDVCWSPYSATVFAAVTSDGKVHVFDLAQNKHEPICEQKVVKRSRLTHVCFNLRDPIIIVGDDRGGVNSLKLSPNLRKVHEPAGED 1884
            +D D Y EP+++++ P NQL LSEAEL+EE +RVLTA DPNVPNN+TKYNYK+R YK+DPPGPGDHL  H ++DG ++ +E ++AK Q A+ +K+ E          XXXXXXXXXX E   +     + GKNQFNYSERAAQT+TNP+R R V TEPPP+V+F +T+ QWEIYD +M+ Y   Q+E    +  A ++     DG                            DD VHSA MG  L+++ERM NQNA+DEIF DFKYWEDASDQFR+GEGSLLPLWRFS+ER KKKQVTA+CWNPR+ DLFAVGYGSYDFL+QGSG+V C+SLKN+  PE+T  TESGVMCLDFHP H +LLAVGCYDGTV+V+DVR +   PIY+S+IKTGKHTDPVWQV+WQ ++  KELNFYS+SSDGRVANWIMSKNELKMEPVMQLK+V  A+++PE    L GLAGGCCFDFNR +EHLFIVGTEEG++HKCSKAYSGQYL+TY GH+MAVYA+RWNPFH R FLSCSADWTVKLWDH L  PVMSFDLGNAVGDV WSPYS+TVFAAVTSDGKVHVFDL++NK+EP+CEQKVVK+++LTHV FN++DP+++VGDDRGGVNSLKLSPNLRK+   A +D
Sbjct:   47 DDVDSYHEPIKKVVIPENQLKLSEAELKEEFSRVLTANDPNVPNNITKYNYKERTYKVDPPGPGDHLYQHLTIDGSMIHKESEDAKTQAAFDQKRAEEEREARELAIXXXXXXXXXXXEKIDEASFQFESGKNQFNYSERAAQTYTNPLRQRSVETEPPPVVSFQATVTQWEIYDTFMEAYEQHQREQIQLQKVAQKKEKDEKDGAETLAPSAAGXXXXXXXXXXXXXXKGKSDDMVHSAAMGKTLRIIERMVNQNADDEIFHDFKYWEDASDQFRDGEGSLLPLWRFSSERAKKKQVTAMCWNPRFADLFAVGYGSYDFLKQGSGVVCCYSLKNSSHPEFTFTTESGVMCLDFHPQHPALLAVGCYDGTVIVYDVRNKANRPIYTSTIKTGKHTDPVWQVNWQEEDLAKELNFYSISSDGRVANWIMSKNELKMEPVMQLKIVATAKDDPE-ESSLTGLAGGCCFDFNRFSEHLFIVGTEEGKLHKCSKAYSGQYLETYAGHHMAVYAVRWNPFHERCFLSCSADWTVKLWDHNLADPVMSFDLGNAVGDVAWSPYSSTVFAAVTSDGKVHVFDLSENKNEPLCEQKVVKKAKLTHVAFNVQDPVLLVGDDRGGVNSLKLSPNLRKIVAGAEDD 680

[Close]

BLAST of jgi.p|Trimin1|169764 vs. uniprot
Match: A0A6G0WMF5_9STRA (Uncharacterized protein n=8 Tax=Aphanomyces TaxID=100860 RepID=A0A6G0WMF5_9STRA)

HSP 1 Score: 852 bits (2201), Expect = 3.830e-304
Identity = 428/644 (66.46%), Postives = 518/644 (80.43%), Query Frame = 1

Query:   43 EDEDLYQEPVRQIIKPLNQLDLSEAELREEHTRVLTATDPNVPNNVTKYNYKDRMYKIDPPGPGDHLAVHFSMDGCLLFRELDEAKQQLAYMEKKREXXXXXXXXXXXXXXXXXXXXPEA--DGGAXXKGGKNQFNYSERAAQTFTNPMRDRGVATEPPPMVNFSSTIAQWEIYDHYMQEYAASQQEAEH--EAARRGIRRPDGGXXXXXXXXXGG--DDTVHSAKMGGVLKMLERMANQNAEDEIFQDFKYWEDASDQFREGEGSLLPLWRFSTERTKKKQVTALCWNPRYPDLFAVGYGSYDFLRQGSGLVACFSLKNTGSPEYTLATESGVMCLDFHPLHHSLLAVGCYDGTVMVFDVRQRRGAPIYSSSIKTGKHTDPVWQVHWQCDEQPKELNFYSVSSDGRVANWIMSKNELKMEPVMQLKLVGGAREEPEVRHPLNGLAGGCCFDFNRHAEHLFIVGTEEGRVHKCSKAYSGQYLQTYEGHNMAVYALRWNPFHPRVFLSCSADWTVKLWDHALPQPVMSFDLGNAVGDVCWSPYSATVFAAVTSDGKVHVFDLAQNKHEPICEQKVVKRSRLTHVCFNLRDPIIIVGDDRGGVNSLKLSPNLRKVHEPAGEDGKLSARASAQAQADNMEKLLQVAD 1956
            +D DLY EP+++I+ P NQL LSE EL+EE +RVLTA DPN+PNN+TKYNYK+R YK+DPPGPGD+L +H S +G ++ +E ++AK Q AY  KK E          XXXXXXXXXX E   + G   + GKNQFNYSERAAQT+TNP+R R + TEPPP++N+ +T+ QW+IYD YM+ Y    +E     +AA++        XXXXXXXXX    DD VHSA MG +L+++ERM NQNAEDEIFQDFKYWEDASD FREGEGSLLPLWRFS+ER KKKQVTA+CWNP + DLFAVGYGSYDFL+QG+GLV C+SLKNT  PE+  ATESGVMCLDFHP   +LLAVGCYDGTVMV+DVR +   PIY+S+IKTGKHTDPVWQV+WQ ++  KELNF+S+SSDGRVANWIMSKNELKMEPVMQLKLV   +++PE    L+GLAGGCCFDFNR +EHLF+VGTEEG++HKCSKAYSGQYL+ Y GH+MAVYA+RWNPFH R FLSCSADWTVKLWDH++P P+MSFDLGN+VGDV W+PYS+TVFAAVTSDGKVHVFDLA+NK+EP+CEQKVVK+++LTH+ FN ++ II+VGDDRGGVNSLKLSPNLRKV      D   + +   + + + ++KLL   D
Sbjct:   41 DDADLYHEPIKKIVIPDNQLRLSETELKEEFSRVLTANDPNLPNNITKYNYKERTYKVDPPGPGDNLYLHLSSEGSMIHKESEDAKVQAAYDVKKLEEEKEARDAAIXXXXXXXXXXGEKIDETGLQFESGKNQFNYSERAAQTYTNPLRQRSLETEPPPVLNYMATVTQWDIYDTYMESYEQHLREQIQLQKAAQKKXXXXXXXXXXXXXXXXXSKDDDMVHSAAMGKILRVIERMVNQNAEDEIFQDFKYWEDASDAFREGEGSLLPLWRFSSERAKKKQVTAVCWNPCFSDLFAVGYGSYDFLKQGAGLVCCYSLKNTSHPEFIFATESGVMCLDFHPQQPALLAVGCYDGTVMVYDVRNKANRPIYTSTIKTGKHTDPVWQVNWQEEDLAKELNFFSISSDGRVANWIMSKNELKMEPVMQLKLVSTVKDDPE-ETSLSGLAGGCCFDFNRFSEHLFVVGTEEGKIHKCSKAYSGQYLENYSGHHMAVYAVRWNPFHERCFLSCSADWTVKLWDHSVPDPIMSFDLGNSVGDVAWAPYSSTVFAAVTSDGKVHVFDLAENKNEPLCEQKVVKKAKLTHITFNTKESIILVGDDRGGVNSLKLSPNLRKVSLFEDADMSKALKERQRMEYETVDKLLNTND 683

[Close]

BLAST of jgi.p|Trimin1|169764 vs. uniprot
Match: A0A067BX68_SAPPC (Uncharacterized protein n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067BX68_SAPPC)

HSP 1 Score: 847 bits (2187), Expect = 4.950e-302
Identity = 423/658 (64.29%), Postives = 510/658 (77.51%), Query Frame = 1

Query:   19 GGNPLNALE--DEDLYQEPVRQIIKPLNQLDLSEAELREEHTRVLTATDPNVPNNVTKYNYKDRMYKIDPPGPGDHLAVHFSMDGCLLFRELDEAKQQLAYMEKKREXXXXXXXXXXXXXXXXXXXXPEA--DGGAXXKGGKNQFNYSERAAQTFTNPMRDRGVATEPPPMVNFSSTIAQWEIYDHYMQEYAASQQEA-EHEAARRGIRRPDGGXXXXXXXXXGGDDTVHSAKMGGVLKMLERMANQNAEDEIFQDFKYWEDASDQFREGEGSLLPLWRFSTERTKKKQVTALCWNPRYPDLFAVGYGSYDFLRQGSGLVACFSLKNTGSPEYTLATESGVMCLDFHPLHHSLLAVGCYDGTVMVFDVRQRRGAPIYSSSIKTGKHTDPVWQVHWQCDEQPKELNFYSVSSDGRVANWIMSKNELKMEPVMQLKLVGGAREEPEVRHPLNGLAGGCCFDFNRHAEHLFIVGTEEGRVHKCSKAYSGQYLQTYEGHNMAVYALRWNPFHPRVFLSCSADWTVKLWDHALPQPVMSFDLGNAVGDVCWSPYSATVFAAVTSDGKVHVFDLAQNKHEPICEQKVVKRSRLTHVCFNLRDPIIIVGDDRGGVNSLKLSPNLRKVHEPAGEDGKLS-----ARASAQAQADNMEKLLQVADTK 1962
            G  P  A E  D D+Y EPV++I+ P NQL L+E EL+EE +RVLTA DPNVPNN+TKYNYK+RMYK+DPPGPGD+L +H +++G ++ +E ++AK Q AY  KK E                     E   +     + GKNQFNYSERAAQT+TNP+R R V TEPPP++N+ +T+ QW+IYD YM  Y   Q+E  + + A +        XXXXXXXXX    T     MG +L+++ERM NQNAEDEIFQDFKYWEDASD FREGEGSLLPLWRF++ER KKKQVTA+CWNP + DLFAVGYGSYDFL+QGSGLV C++LKNT  PE+  ATESGVMCLDFHP   +LLAVGCYDGTV+V+DVR +   PIY+S+IKTGKHTDPVWQV+WQ ++  KELNF+S+SSDGRVANWIMSKNELKMEPVMQLKLV   +++PE    L+GLAGGCCFDFNR +EHLFIVGTEEG++HKCSKAYSGQYL+TY GH+MAVYA+RWNPFH R FLSCSADWTVKLWDH+LP P+MSFDLGN+VGDV W+PYS+TVFAAVTSDGKVHVFDLA+NK+EP+CEQKVVKR++LTHV FN R+ I++VGDDRGGVNSLKLSPNLRK+    GED   +      +   + + + +EKLL   D K
Sbjct:   32 GDVPAQATEPDDADIYHEPVKKIVVPDNQLRLNEQELKEEFSRVLTANDPNVPNNITKYNYKERMYKVDPPGPGDNLYLHLALEGSMIHKESEDAKAQAAYDMKKAEEEKEARDAAIKIAKEEAEAKGEKLDETALQFESGKNQFNYSERAAQTYTNPLRQRSVETEPPPVLNYMATVTQWDIYDTYMDAYEQHQREQIQLQKAAQXXXXXXXXXXXXXXXXXXXXXT-----MGKILRVIERMVNQNAEDEIFQDFKYWEDASDAFREGEGSLLPLWRFASERAKKKQVTAVCWNPCFSDLFAVGYGSYDFLKQGSGLVCCYTLKNTSHPEFIFATESGVMCLDFHPQQPALLAVGCYDGTVLVYDVRNKVNRPIYTSTIKTGKHTDPVWQVNWQEEDLAKELNFFSISSDGRVANWIMSKNELKMEPVMQLKLVNTVKDDPE-ETSLSGLAGGCCFDFNRFSEHLFIVGTEEGKIHKCSKAYSGQYLETYAGHHMAVYAVRWNPFHDRCFLSCSADWTVKLWDHSLPDPIMSFDLGNSVGDVAWAPYSSTVFAAVTSDGKVHVFDLAENKNEPLCEQKVVKRAKLTHVTFNTRESIVLVGDDRGGVNSLKLSPNLRKIAVVDGEDVATALPLKLTKDRLRTEHEKVEKLLSTNDNK 683

[Close]

BLAST of jgi.p|Trimin1|169764 vs. uniprot
Match: A0A812NQ83_SYMMI (Hypothetical protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812NQ83_SYMMI)

HSP 1 Score: 835 bits (2158), Expect = 8.820e-299
Identity = 415/642 (64.64%), Postives = 474/642 (73.83%), Query Frame = 1

Query:   43 EDEDLYQEPVRQIIKPLNQLDLSEAELREEHTRVLTATDPNVPNNVTKYNYKDRMYKIDPPGPGDHLAVHFSMDGCLLFRELDEAKQQLAYMEKKREXXXXXXXXXXXXXXXXXXXXPEADGGAXXKGGKNQFNYSERAAQTFTNPMRDRGVATEPPPMVNFSSTIAQWEIYDHYMQEYAASQQEAEHEAARRGIRRPDGGXXXXXXXXXGG--DDTVHSAKMGGVLKMLERMANQNAEDEIFQDFKYWEDASDQFREGEGSLLPLWRFSTERTKKKQVTALCWNPRYPDLFAVGYGSYDFLRQGSGLVACFSLKNTGSPEYTLATESGVMCLDFHPLHHSLLAVGCYDGTVMVFDVRQRRGAPIYSSSIKTGKHTDPVWQVHWQCDEQPKELNFYSVSSDGRVANWIMSKNELKMEPVMQLKLVGGAREEPEVRHPLNGLAGGCCFDFNRHAEHLFIVGTEEGRVHKCSKAYSGQYLQTYEGHNMAVYALRWNPFHPRVFLSCSADWTVKLWDHALPQPVMSFDLGNAVGDVCWSPYSATVFAAVTSDGKVHVFDLAQNKHEPICEQKVVKRSRLTHVCFNLRDPIIIVGDDRGGVNSLKLSPNLRKVHEPAGEDGKLSARASAQAQADNMEKLLQVADTK 1962
            ++ED Y+EP+++I++P NQ+ L+E +L EE TR+LTA DPNVPNN+TKYNYK++ YK DP GP DHLA HFSMDGC L +E +EAK Q    E K                       +A+     K GKNQFNYSERAAQTF N +R RGVATEPPP+V F +T+ QWEIYD YM EY    Q+      +   +   GG         G   DD VHS KM   LK+LERM NQNAEDEIFQDFKYWEDASD +R GEGSLLPLWRFSTERTK+KQVTA+ WNP YPDLFAV YGSYDF+RQGSG+V CFSLKNT  PEY  +TESGVMCLDFHP H SLLAVGCYDGTVMVFDVR R   PIYSSSI+TGKHTDPVWQVHWQ DE                                 LKLV  AR++P+  + L+GLAGGCCFDFNRH EHLFIVGTEEG++HKCSKAYSGQYL+TY+GH+MAVYAL+WNPFHPRVF+SCSADWTVK+WDH  P P++SFDLGNAVGDV W+PYS+TVFAAVTSDGKVHVFDLA+NKHEP+CEQKVVKR++LTHV FN  DPI+IVGDDRGGVNSLKLSPNLRKVHEP GE+G++      Q Q D MEKLL  AD K
Sbjct:    9 DEEDFYREPIKRIVRPDNQVVLTEEQLGEEFTRILTANDPNVPNNITKYNYKEKAYKQDPEGPMDHLAFHFSMDGCSLHKESEEAKHQQQLEEAKSMEMERLKKEAAQEALDAGEDDVDAEA---PKTGKNQFNYSERAAQTFNNSLRSRGVATEPPPVVQFFATVTQWEIYDAYMAEYKKQFQK------KSDAKNGSGGGMADDSGGKGSKEDDMVHSQKMSNALKILERMVNQNAEDEIFQDFKYWEDASDWYRNGEGSLLPLWRFSTERTKRKQVTAIKWNPVYPDLFAVAYGSYDFMRQGSGMVCCFSLKNTSHPEYIFSTESGVMCLDFHPRHQSLLAVGCYDGTVMVFDVRNRVNRPIYSSSIRTGKHTDPVWQVHWQ-DE---------------------------------LKLVATARDDPDEVN-LSGLAGGCCFDFNRHNEHLFIVGTEEGKIHKCSKAYSGQYLETYQGHHMAVYALKWNPFHPRVFISCSADWTVKIWDHNYPSPILSFDLGNAVGDVAWAPYSSTVFAAVTSDGKVHVFDLAENKHEPLCEQKVVKRAKLTHVFFNQSDPILIVGDDRGGVNSLKLSPNLRKVHEPRGEEGEILPHDPVQLQVDKMEKLLLAADQK 606

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|169764 vs. uniprot

BLAST of jgi.p|Trimin1|169764 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A835YM82_9STRA	0.000e+0	100.00	Putative dynein intermediate chain n=1 Tax=Tribone...	[more]
D7FZ08_ECTSI	0.000e+0	76.11	Putative, Dynein intermediate chain n=1 Tax=Ectoca...	[more]
A0A7S2CDX8_9STRA	0.000e+0	69.33	Hypothetical protein n=1 Tax=Florenciella parvula ...	[more]
F0YGU7_AURAN	3.320e-310	65.47	Uncharacterized protein n=1 Tax=Aureococcus anopha...	[more]
K3X8Q8_GLOUD	2.290e-309	64.00	Uncharacterized protein n=2 Tax=Pythiaceae TaxID=4...	[more]
H3H1T8_PHYRM	3.150e-307	65.30	Uncharacterized protein n=18 Tax=Phytophthora TaxI...	[more]
A0A2D4BVK3_PYTIN	3.050e-306	66.30	Dynein intermediate chain 2 n=2 Tax=Pythium TaxID=...	[more]
A0A6G0WMF5_9STRA	3.830e-304	66.46	Uncharacterized protein n=8 Tax=Aphanomyces TaxID=...	[more]
A0A067BX68_SAPPC	4.950e-302	64.29	Uncharacterized protein n=4 Tax=Saprolegniaceae Ta...	[more]
A0A812NQ83_SYMMI	8.820e-299	64.64	Hypothetical protein n=1 Tax=Symbiodinium microadr...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_66	contig	Contig_66:43539..53358 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|169764\|e_gw1.66.81.1
Description	Dynein intermediate chain
COG category	Z
Max annot lvl	121069\|Pythiales
EggNOG OGs	KOG1587@1\|root,KOG1587@2759\|Eukaryota,1MCAR@121069\|Pythiales
Evalue	3.76e-310
Seed ortholog	65071.PYU1_T013607
Hectar predicted targeting category	other localisation
TranscriptId	170086
Track	FilteredModels1
ProteinId	169764

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|169764	gene_9637	Tribonema minus UTEX_B_3156	gene	Contig_66 43539..53358 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|169764	Trimin1\|169764\|e_gw1.66.81.1	Tribonema minus UTEX_B_3156	polypeptide	Contig_66 43539..53358 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_9637_1	exon_9637_1	Tribonema minus UTEX_B_3156	exon	Contig_66 43539..43704 +
exon_9637_2	exon_9637_2	Tribonema minus UTEX_B_3156	exon	Contig_66 44016..44178 +
exon_9637_3	exon_9637_3	Tribonema minus UTEX_B_3156	exon	Contig_66 44750..44950 +
exon_9637_4	exon_9637_4	Tribonema minus UTEX_B_3156	exon	Contig_66 45972..46084 +
exon_9637_5	exon_9637_5	Tribonema minus UTEX_B_3156	exon	Contig_66 46130..46335 +
exon_9637_6	exon_9637_6	Tribonema minus UTEX_B_3156	exon	Contig_66 47198..47340 +
exon_9637_7	exon_9637_7	Tribonema minus UTEX_B_3156	exon	Contig_66 48434..48620 +
exon_9637_8	exon_9637_8	Tribonema minus UTEX_B_3156	exon	Contig_66 49383..49549 +
exon_9637_9	exon_9637_9	Tribonema minus UTEX_B_3156	exon	Contig_66 50519..50731 +
exon_9637_10	exon_9637_10	Tribonema minus UTEX_B_3156	exon	Contig_66 51410..51593 +
exon_9637_11	exon_9637_11	Tribonema minus UTEX_B_3156	exon	Contig_66 52483..52599 +
exon_9637_12	exon_9637_12	Tribonema minus UTEX_B_3156	exon	Contig_66 53242..53358 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_9637	CDS_9637	Tribonema minus UTEX_B_3156	CDS	Contig_66 43539..43704 +

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_66:43539..53358+
coding sequence from alignment at Contig_66:43539..53358+

spliced messenger RNA

>mRNA_9637 ID=mRNA_9637|Name=jgi.p|Trimin1|169764|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1977bp|location=Sequence derived from alignment at Contig_66:43539..53358+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGCGGGGCAGCATTGGCGGGGGCAATCCGCTCAATGCCCTGGAAGATGA
AGATCTGTACCAGGAGCCTGTCAGGCAGATCATCAAGCCGTTGAACCAGC
TTGATCTTAGTGAAGCAGAACTCAGGGAGGAACATACGAGAGTACTTACA
GCCACGGACCCAAATGTCCCCAATAACGTCACAAAGTACAACTACAAGGA
CCGCATGTACAAAATTGACCCCCCGGGGCCTGGCGACCACCTGGCGGTTC
ACTTCAGCATGGATGGGTGCCTGCTGTTCAGGGAGCTGGATGAGGCAAAG
CAGCAGCTGGCGTACATGGAGAAAAAAAGGGAGGAGGAAGAGGAGGCCAA
GCGCGCCGCTGCGGCGGCGGCGGCGGAGGCGGGAGAGGAGGAGCCGGAGG
CAGACGGGGGGGCGGGGGGGAAGGGCGGCAAGAACCAGTTCAACTACTCG
GAGCGTGCGGCGCAGACGTTCACCAATCCCATGCGCGACAGGGGGGTGGC
GACGGAGCCGCCGCCGATGGTCAACTTCAGCTCCACCATCGCGCAGTGGG
AGATCTACGACCACTACATGCAGGAGTACGCGGCGTCGCAGCAGGAGGCG
GAGCACGAGGCGGCGCGCCGCGGCATACGCCGGCCGGATGGGGGGGGGGG
GGGGCGCGGGCGGGGGAGGGGGGGGGGGGACGACACCGTCCACTCTGCGA
AGATGGGCGGCGTGTTGAAGATGCTGGAGCGCATGGCCAATCAGAACGCG
GAGGATGAGATCTTCCAGGACTTCAAGTACTGGGAGGACGCGTCGGACCA
GTTCCGCGAGGGCGAGGGGAGCCTGCTGCCGCTGTGGCGCTTTAGCACGG
AGCGCACCAAGAAGAAGCAGGTCACCGCGCTCTGCTGGAACCCGCGCTAC
CCCGACCTGTTTGCCGTCGGTTACGGCAGTTACGACTTCCTGCGCCAGGG
CAGCGGCCTCGTGGCGTGCTTCTCGCTCAAAAACACGGGCAGCCCCGAGT
ACACGCTCGCTACGGAGTCCGGCGTCATGTGCCTGGACTTCCACCCGCTG
CACCACTCGCTGCTGGCGGTGGGCTGCTACGACGGCACCGTGATGGTGTT
CGACGTGCGCCAGCGCCGCGGCGCGCCCATCTACAGCTCCTCCATCAAGA
CGGGCAAGCACACGGACCCGGTGTGGCAGGTGCACTGGCAGTGCGACGAG
CAGCCGAAGGAGTTGAACTTCTACTCCGTCTCCTCCGACGGCCGCGTTGC
CAACTGGATCATGAGCAAGAACGAGCTCAAGATGGAGCCGGTCATGCAGC
TCAAGCTCGTCGGCGGGGCGCGGGAGGAGCCGGAGGTGCGTCACCCCCTC
AACGGCCTCGCGGGCGGCTGCTGCTTCGACTTCAACCGCCACGCGGAGCA
CCTGTTCATCGTCGGCACGGAGGAGGGGCGCGTGCACAAGTGCAGCAAGG
CGTACTCCGGCCAGTACCTGCAGACGTACGAGGGGCACAACATGGCGGTC
TACGCGCTGCGCTGGAACCCGTTCCACCCGCGCGTGTTCCTGTCGTGCAG
CGCGGACTGGACGGTCAAGCTCTGGGACCACGCGCTGCCGCAGCCCGTCA
TGTCCTTCGACCTCGGCAACGCGGTCGGCGACGTGTGCTGGTCGCCGTAC
TCAGCGACCGTCTTTGCCGCCGTCACCAGCGACGGCAAGGTGCACGTCTT
CGACCTCGCGCAGAACAAGCACGAGCCCATCTGCGAGCAGAAGGTGGTGA
AGCGTTCGCGCCTGACGCACGTGTGCTTCAACCTGAGGGACCCCATCATC
ATCGTGGGCGACGACCGTGGGGGCGTCAACTCCTTGAAGTTGTCGCCGAA
CTTGCGCAAGGTGCACGAGCCCGCGGGCGAGGACGGCAAGCTGAGCGCGC
GCGCCAGCGCTCAGGCGCAGGCCGACAACATGGAGAAGCTCCTGCAGGTC
GCCGACACAAAACCCACGCCGGCGTGA

protein sequence of jgi.p|Trimin1|169764

>Trimin1|169764|e_gw1.66.81.1 ID=Trimin1|169764|e_gw1.66.81.1|Name=jgi.p|Trimin1|169764|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=659bp
MRGSIGGGNPLNALEDEDLYQEPVRQIIKPLNQLDLSEAELREEHTRVLT
ATDPNVPNNVTKYNYKDRMYKIDPPGPGDHLAVHFSMDGCLLFRELDEAK
QQLAYMEKKREEEEEAKRAAAAAAAEAGEEEPEADGGAGGKGGKNQFNYS
ERAAQTFTNPMRDRGVATEPPPMVNFSSTIAQWEIYDHYMQEYAASQQEA
EHEAARRGIRRPDGGGGGRGRGRGGGDDTVHSAKMGGVLKMLERMANQNA
EDEIFQDFKYWEDASDQFREGEGSLLPLWRFSTERTKKKQVTALCWNPRY
PDLFAVGYGSYDFLRQGSGLVACFSLKNTGSPEYTLATESGVMCLDFHPL
HHSLLAVGCYDGTVMVFDVRQRRGAPIYSSSIKTGKHTDPVWQVHWQCDE
QPKELNFYSVSSDGRVANWIMSKNELKMEPVMQLKLVGGAREEPEVRHPL
NGLAGGCCFDFNRHAEHLFIVGTEEGRVHKCSKAYSGQYLQTYEGHNMAV
YALRWNPFHPRVFLSCSADWTVKLWDHALPQPVMSFDLGNAVGDVCWSPY
SATVFAAVTSDGKVHVFDLAQNKHEPICEQKVVKRSRLTHVCFNLRDPII
IVGDDRGGVNSLKLSPNLRKVHEPAGEDGKLSARASAQAQADNMEKLLQV
ADTKPTPA*

mRNA from alignment at Contig_66:43539..53358+

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_9637 ID=mRNA_9637|Name=jgi.p|Trimin1|169764|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=9820bp|location=Sequence derived from alignment at Contig_66:43539..53358+ (Tribonema minus UTEX_B_3156 )
ATGCGGGGCAGCATTGGCGGGGGCAATCCGCTCAATGCCCTGGAAGATGA
AGATCTGTACCAGGAGCCTGTCAGGCAGATCATCAAGCCGTTGAACCAGC
TTGATCTTAGTGAAGCAGAACTCAGGGAGGAACATACGAGAGTACTTACA
GCCACGGACCCAAATGGTAAGGCTGTCTGTTCTCTGTGAAAGTCGCTAGT
TGATTGCCCGAACTAGCCACGGCAGAACCACGCCACGACATTGACATGCA
TGAATTGTCATAAGCATACAATGTGATTCGTGCAGTCACTATTCACTGGG
AGGCTGCCAGAGTTGCAAAGCACGCAGCTGTGCCGTTGCAACTGTAATTA
CGAATCGGCAGTTGACAGTATGCAGACGCCGTGCATCCGAAGAAGCGTAC
AGGTCCCCCTCTTACATGGGTGGCAGCGCACGCTCACCTTGACTCACCAT
TCCACTCCCGTCTATCCACTGTTGCAGTCCCCAATAACGTCACAAAGTAC
AACTACAAGGACCGCATGTACAAAATTGACCCCCCGGGGCCTGGCGACCA
CCTGGCGGTTCACTTCAGCATGGATGGGTGCCTGCTGTTCAGGGAGCTGG
ATGAGGCAAAGCAGCAGCTGGCGTACATGGAGAAAAAAAGGTACGACGAG
TTCTGACACATGCCATGATTCACCATGCCAGCCTTCAGGGCAGAGGTCGC
GCCCCGGTTATGTGGCTGCTGTAGCACAAAACACAGCAGTGCGCTGCGAT
GTGAAGCAGCGCCTGCCGCTGCAGGCACTGGCGCCGTGCGAACTGCCGTC
TCTCTGCTTGGGGCAATAAGTTTGCGTGCATGCGTACGCAGATGCAACAG
TGCAGCTTGCAGGGCCTGCCATTCAACTGCCGCACCATGACGTGAGGAGT
TGCAAGAGGTCGTGTCGACTGCTGGGGTTCACGCTGGGTATGTAGCTGTG
CAGGCCGACCTGGGGGCTACTGCAACACCGCCACCTGCACCCTCTTGTGA
GTGGCCGGATTTGCTCACCCCGAGATGGGGAAAGCAAGAGGAAGTCAGAC
GAGCAGTGCTGGCGCCAATGCGGGGAGGGAGGGGCAAACAGGCTGCTCAG
AGCGCTGTCAAATCCTTGCATCAGACACGCCGGGCCTCTAGCAGCGACGC
CTTCAGCAGCATGTACTTGGCACTTGGCCTGAGTACCGACACTTCTTGTA
TACCGGCGCAGGGAGGAGGAAGAGGAGGCCAAGCGCGCCGCTGCGGCGGC
GGCGGCGGAGGCGGGAGAGGAGGAGCCGGAGGCAGACGGGGGGGCGGGGG
GGAAGGGCGGCAAGAACCAGTTCAACTACTCGGAGCGTGCGGCGCAGACG
TTCACCAATCCCATGCGCGACAGGGGGGTGGCGACGGAGCCGCCGCCGAT
GGTCAACTTCAGGTGAGCAAACTTCACTGTGCACTTCAACTTCAATATCA
ACATAAGCTTGCAAGAACCAGTTCAGCTACTCGGAGCGCGCGGCGCAGAC
GTTTATGAACCGCATGCACGACAGGGCGGTGGTCAACTTCTGGTGAGCAA
ACTTCAACATGTATGCTTCAACTTCAACATCAACAACACTAAGAACCACG
TTCACTATTCGGAGCACGCGGCGCAGACGTTCACAAATCCCATGCGCGAC
AGGGGGGTGGCGATGAAGCCGCCGCCGATGGTGAACTTCAGGTGAATCCG
CGCGCACATGTCAACATGCGCACCCTTAACTTCAATATCAACATGAAATC
GTTGCAGTTGTGGATTCCCGCTTGCCTCCTGCGACGGCTCCCCAGGCGTG
CAACACAACGTGCGTGACTGCGAAATATGCAGTGTCTTGACGGAAGGACG
CGCTGGGGGCCGCCGTGGGAGCAGTGCCGGTGCACGCGTTGAGCACTGCT
GCGCACTGGTGCAACACTTTGCATTTCATGACACTCTGCCATTTACAGCA
AAGAAAATACGTGTTCACGGCCCTGGAGCGAAACGTGCATGCTCTCTGTC
CTGTTGGCCAGAGATACAAAAAGCACCCTGTTTGTGTTTACCGTCGTCAC
CCTACACACAGCGGTTCGCCGCATCAGTCCCACTAGGGTCTGCAGCTGCG
CCAGACGTTCCGCATGCGCAACTACGCCGCCAGTGATTATACAGCAGCCC
ACACTCTAAAGATGCACTCTAGCTAGCAGCACCGCCCATAGCGTCTGCAC
GTGCGTATACATCATAAGATGATCATATGCATGGACGTACGCGCAGAGCT
GAGCGCTGTCTCCGCTGCCGCCGCCACCCGCAGCTCCACCATCGCGCAGT
GGGAGATCTACGACCACTACATGCAGGAGTACACGGCAAAGCGCCTGTAC
TTGCGTATAATTGTATGCACTGTGCATCAACGCATGCGCAGAGCTGAGCG
CTGTCCCCGCCGCCGCCGCCGCCGCCGCCGCAGCTCCACCATCGCGCAGT
GGGAGATCTACGACCACTACATGCAGGAGTACGCGGCGTCGCAGCAGGAG
GCGGAGCACGAGGCGGCGCGCCGCGGCATACGCCGGCCGGATGGGGGTCT
GGGGGACGAGGGGGGGGCGCTGGCGGTTACGGGGGGGGGAGGGGGGGGGG
GGCGCGGGCGGGGGAGGGGGGGGGGGGACGACACCGTCCACTCTGCGAAG
ATGGGCGGCGTGTTGAAGATGCTGGAGCGCATGGCCAATCAGAACGCGGA
GGATGAGATCTTCCAGGACTTCAAGTACTGGGAGGACGCGTCGGACCAGT
TCCGCGAGGGCGAGGGGAGCCTGCTGCCGCTGTGGCGCTTTAGCACGGTG
AGCTGCCAGGGGGGGGGGGGGGGGGCTTTCATTGTGTATATCCATGGCGC
ATGCTAGTCTAAAATTTATGTGTGATGATGTCACAAGCAGCGGGGAGCCT
GCTGCCGCTGTGGCGGTGTGCCGCGGGGGGGGAGGGGGGCGATGAAATTC
TGCATATGCGGGGGTGGCTGTGTGCAGTGATGTCACAAGCGGAAGGAGCC
CGCTGCCGCTGTGGCGCTTCAGCACGGTGAGCTGCGGGGGGGGGGGGGGG
GGGGATTGTGCTTATGCGGGGGTGGCTGTACGCTACGTCGCGATACCATG
CGTAAATGATGTCACAAGCGGAGGGGGCGTGCTGCGGCTGTGGCGCTTCA
GCACGGTGAGCCTCGGGGGGGGGCAGGGGGGTGCAATTGCTCATACGCGG
GGGTGACTGTACGCTAGGTCGCGATCCCGTGTGTGATGATGTCACAAGCG
AAGGGAGCATGCTGCCGCTGTGGCGCTTCAGCACGGTGAGCCGCGGGGGG
GGGGGGGGGGGGGGGGGGGGCTGCACTTGCGCATTCGCGGGATATGCTAG
TTTGCGTTCAACACTGCACCAGCCAGCGTGCGCGCATGCAGAAGCGCAGC
ACATTACCAGGACTGCAAGCTTGAGAGGCAGCATGCCGTGTTTTGTGCCC
CCATCCTGATGCAGAAGCATCAGTCCAAGGATCCTGCCCACTTGGCAACA
CTTCCTGCTGGTCCAGTCTGTCATGATCTCGCCTAGTGGTGAACATCGTA
CTTCACATCCTTACAAATAGCTGTTTAATCGGACCGCTAGTAACACCTCT
GCACATGTCTGCCACGCTAATCGTATTTCGTTCGTTGCCGCTGGCGCGTA
CTCGTCCAGGAGCGCACCAAGAAGAAGCAGGTCACCGCGCTCTGCTGGAA
CCCGCGCTACCCCGACCTGTTTGCCGTCGGTTACGGCAGTTACGACTTCC
TGCGCCAGGGCAGCGGCCTCGTGGCGTGCTTCTCGCTCAAAAACACGGGC
AGGTGCGTGCGCGCGGGGGAGTCACGCGCGTGCAGCTTGCACCAGACGTG
TTGAAGTGCGAGCGGGAAGTGTGTCCCCCAGGCGCACGCGACGCCGCGTT
TCGCACGCCTCCATCAGCGAAGCATTGCGCTTGCAGCCTTGAGTCAGGGC
TAGAATTAGTGTTAGGGTTAGAGTTAGGGTTAACGTGCGCACAGGTGCAG
TGAGCATCCAGCGTCAGTGCTCAGTAGGCGTCCCCTGCATCAGCGCTCAG
CTTGGCCCTAGCCCTGAGCACAGGTGTCCATATCAGAAAATGAAGGGTTG
TTTTGAGTGGCGGCAAACTGTCCACGGAGCGCGCTTCCATGAGCCCCTGA
GGGCAGCGCTCAGACGGAGATCTACGCCATCCGCTGCGCGCTCATGGCGT
CCCCACATCAGCCCGCGCCACAGTGGCGGACAGGTGCCGAAGCGGGGCGA
AGGTCGTCGACACTGCCCAACATCAATGACACTCCCTCTTTGCAATTGCA
ACAGAGTGGGGGTTAGGTTAGCGACGCCCCCCGGCAAACCGCCGCCGTCG
TCGTGTCACCGAGCAGATCACGCCCAGCGGCAATGCTTCGCATGTGGGCA
TATTGCTGTGCACTGCCGCTCCTCCCCCCCCTCCGATCCTCTACACGAGT
ACAGCCCCGAGTACACGCATGACAGGACTTCACATGCTTTGTTAAGCGCT
GCTGTGGCTGCCCCCCCCCCCACACACACCCGCCCCCCCCAGTCCTCTAC
ACGCGCGTGTAGCCCCCAGTTCCTGCTCGCGACGGAACTTCACACACGTC
CACACGCTTTGCTGAGCGCTGCTGCTGCTCCCCCCTCCCCCCCCCCCCCC
CAATCCCCCACGCGCGCACAGCCCCGAGTACACGCTCGCGACGGAGTCCG
GCGTCATGTGCCTGGACTTCCACACAAGTTCACATGCTTTGCTGAGCGCT
GCTGTTGCCCCCTCTACCCGTCACGTGCGCGCAGCCCCGAGTACACGCTC
GCGACGGTGTCCGGCGTCATGTGCCTGGACTTTCTCACACTTTGCTGAGC
GCTGCTGTTGCCCTCCCCCCCCCCCCACCGTCTACGCGCGCGCAGCCCCG
AGTACACGCTCGCTACGGAGTCCGGCGTCATGTGCCTGGACTTCCACCCG
CTGCACCACTCGCTGCTGGCGGTGGGCTGCTACGACGGCACCGTGATGGT
GTTCGACGTGCGCCAGCGCCGCGGCGCGCCCATCTACAGCTCCTCCATCA
AGACGGGCAAGCACACGGACCCGGTGTGGCAGGTGCGCGCAGTTAGGGTT
AGGGTTAGGGGTTGGGGTAGGGTTTGGGGGTAGGATTAGGGTTAGGGTTA
GGGTAAGGGATAGCCGGTGTGCGAGATCACGCGTGCGTGACTTTCTATCT
ACAGCTCATCAAGACGGGCAAGCACACGGACCCGGTGTGGCAGGTGCGCC
GGGTTAGGGTTAGGGGTAGGGTTAGCCGGTGTACGTGGTCACACGTGCGT
GGGTTTCGATCTACAGCACGTCCATCAAGACGGGCAAGCACACGGACCCG
GTGTGGCAGGTGCTATCTCGTGGGCGTGATTGCGCGTGACCTTTGTCGTG
CCCCTCGCGTCATGTGCATCTAGGCAGCGCATCATGGGCAAACAGGAAAA
CCTGGTGTGGCAGGTGCGCAGCGAGCGGTTAGGGTTGAGGGCTTGGGTTA
GGTTAGGAATAGTTGCATAGTGAGGTCGTGCACAATTGTCTGTGCGCATC
GCACCCCATGCCTTCCGCGCCAGGATGTGACCACCGAGTGCCCAAGCAGG
TGCAGCATAGTGGATGGTGCATTGCGCGAGAATGCATTTTTCAGTGTCAG
AGTGTGCCATGACAGACCAGCGGACTCCTTCAACCGCCCTCAAGCTGCAT
TCGGGACCTCTCCCATGGATTGCGGTCTGATTCCGCGGCAGCAACGGTGG
CGTACAATCTGACTGAAATGCATTGTAGACACGTGCTGTTGCTGACGCCG
TCACACTCGACCCCCCCCCCCCCCCTCCCGTGCCGCGGGCGCAGGTGCAC
TGGCAGTGCGACGAGCAGCCGAAGGAGTTGAACTTCTACTCCGTCTCCTC
CGACGGCCGCGTTGCCAACTGGATCATGAGCAAGAACGAGCTCAAGATGG
AGCCGGTCATGCAGCTCAAGCTCGTCGGCGGGGCGCGGGAGGAGCCGGAG
GTGCGTCACCCGTTGTCCTTTCTTGTCACCAATTGAGGACTGCAAGTTGA
AGTAATGCAGGTCATTGGTGGTACGCTTTGTCCTGCCTTATCAACCGTTG
GACTGCAAGTTGAAGTTGTGCAGGTCGTCGGCGGGGCGCGGGAGGAGCCG
GGGCTGCGCCACACGCTTACCTTCTTATTTGTGGTGTGAAACTGCAAGTT
GAAGTTGTGCACCTAATCGTGGCGGTGGGGCACGACAGGCACCGGAGGGA
CATCACCAGCTTAGGAACTGCAAGCTGACCTTGAACTTCAGCAGGCGCTG
CGAGCACCTGTACATTATCGGCACAGGGGAGGGGCAGTCCTGCTCCCCCC
CCCCCCTCCCCAATCTCGAGAGTTCGAACCTCTACATACCCCGCATGCAT
GTGCTCTTGCAGACGAGCCTGGCTGCCTTCCCGTCTTCAGCTGCTGGTTC
AAGTTGAACCAGCACTCCAATCTCATCAACGTGCCCCCAGACCGTCACCG
CACGCCGCCTTTGCGCCTGCTGCTTTGGTGTCAACCTGCGCTTTCCAACG
CAAACCACATGCCTTTGTAACCTTCGAACGTCACTGCCCCCCCCCCCCCG
TCTCCTTTTTGAGGCAGCATGAAATTCCAAAAGCAATAGCATGCTCCACT
CTTTACAGAACAGTCAATCATCGTCATTGCAAGGGCTGAAAATCAAATCC
CCCTCCTTCCCCCCCCCCATTTGAGGCAGCACAAAATCAATAAAGAAGTA
GAGTGCGCCACAATTCACAGAACAGATAAAACCTGTCAATGCGAGGGCTG
AACCCCCCCCCCCCCTCTCCCTCTCACACACACGCACAGACGAGCCTCAA
CGGCCTCGTGGGCGGCTGCTGCTTCGACTTCAACCCGCACTTTCCGATCG
CAAACCTCGAGCCTTTATAACCTTGGAACATCACCGCGCTCCTTCCCCCC
CCCACACACATACGCGCGCGCGCAGACGAGCCTCAACGGCCTCGCGGGCG
GCTGCTGCTTCGACTTCAACCGCCACGCGGAGCACCTGTTCATCGTCGGC
ACGGAGGAGGGGCGCGTGCACAAGTGCAGCAAGGCGTACTCCGGCCAGTA
CCTGCAGACGTACGAGGGGCACAACATGGCGGTCTACGCGCTGCGCTGGA
ACCCGTTCCACCCGCGCGTGTTCCTGTCGTGCAGCGCGGACTGGTGAGTG
ATTGACTCGTTGACTCATGACTTGTGAGTGCGTGGGTGAGTCCGCGACGC
GCTGCGCTGGAACCCGTTTCGCCCAAGCGCGTTCCTGTCGTGCAGCGCGG
ACTGGTGAGTGATTCACTTGAAGCATGACTCTTGAGTGTGCGGGCGAGTC
ATCTACGCGTTGCGCTGGAACCCGTGTTTCACACATGCGTTCTGTCGTGC
AGCGCGGATTGGTGAGTTTTATGACTCGGGGGATGACTCTTTGACTCGCG
AGGGCATATATGGCCGCCTGTGTGCTGCGGTAGAAGGTGCGCGCGTACTC
GAACCCCGTGCGCTGCAGTGGCACTGAGAGTGGTGAGAGGGCATGCCCGC
ACCTTTGCTGGCCAGCATTCTCCCGGAGCCCACGGTTGAGTGTGAGCGGT
GTTGCTGCTGTGCAGCGTGGAAGACTGGCTGGTGGGTACTCCTCTGAACG
CGCTCGACCGTGCGCGATCGCCGACCGTTGTCGCTGCCCACCGCGTGCGT
GCGCAGGACCGTCAAGCTCTGGGACTACGCGCTGCCGCAGCCCCATCTAT
CCTCTGGCAGCGCAGACAAACGCCGCTGTGTTTGCTTTTATGACAGCTGC
TCTCAATCCATCTGAATCGCGACCGTGCACGCGCGCTGCCGCCGCCTCTT
CTTTGTACCATGCGTACGCAGGACGGTCAAGCTCTGGGACCACGCGCTGC
CGCAGCCCGTCATGTCCTTCGACCTCGGCAACGCGGTCGGCGACGTGTGC
TGGTCGCCGTACTCAGCGACCGTCTTTGCCGCCGTCACCAGCGACGGCAA
GGTGCACGTCTTCGACCTCGCGCAGAACAAGCACGAGCCCATCTGCGAGC
AGAAGGTGAGCGCTGCTGCTGCTGCTGCCGGTGCTGCTGCCGCTGCCACT
GCTATGGCAGTGTCGCCGGTACTGCGCAGGCGCGGAGTGCACGTCTTCGA
CCTCGCGCAGAACGAGTACGAGCCCAGCAGGAGTGTGCGCCGGGCACTGC
TGCTGCCGCCGCCGCTGCTGCTGTGGCAGTGCTCGTCGGGTACTGCGCGG
ATGCGGAGCGCGCGTCCTCGATGTCGTCGCGTAAAACAAGTATGAGCCCT
CTTGCGAGCAGGAGTGAGAGCCGGGCGCTGCTGGTGCTGCTGCTGCTGCG
GTGCCAGAATGGCATGCGTGGGGACTGAGTCGACGAGCGCCAACGTGATC
ACCTTGCGAGCTGTCTGTCGGCATGCGACCGCGTAGCGCCGCGGTGGCGC
GTGTTGCTGCTGCGAACACCGAAGAGTGCTGCGTGCTGAGCGTTGCTGCA
CGTAGCTCAGCGTCGCGAGCCGATGAGCACGAGCCAGCAGCGCTGGATTG
CGCCCGCGCTGCAAGCCCCCTTCTTTTAAAATGCAGTGCGTTAAAGGCTT
TTTTTTTACCGGAGGTGGCGCACCGCATACACCTGCGGCAGACAGATGCC
CCGTATTCGTATGGCATAAAGCCATGCGGCGGGCATCGTGTATGGGGTGA
TGGTACTGAGCGGACGAGCGGGGCGGCTGATGCGTCGTGGTCGCAATAAT
AGCAGAAGTTCAACTTGAAGTTGAATATTGACTGTTGTGACCGGCAACGG
CGAGTGGCAGCGCGTCCCCCCCATACGCTTTCAGGCTGGTGCTGTTCCAC
CATGCGTTTGCGCAAGCACAACTTTCATGGCAGGCGAACCCCGCTCATGC
GATGCGCGTGCGACCGGCTGCTTGCGCGCGCGCGCGATCCACAGGTGGTG
AAGCGTTCGCGCCTGACGCACGTGTGCTTCAACCTGAGGGACCCCATCAT
CATCGTGGGCGACGACCGTGGGGGCGTCAACTCCTTGAAGTTGTCGCCGA
ACTTGCGCAAGGTGCGTCACCGCCGCGCCTCGCCGCTTGCAGCGCGAAAC
TGCCGTCCGCCTCTCTGTGTTGAGAACCCTGCCTGCTAGCGACATGCGTT
GCAGCGCCACACCACTGAACTATTTGCATATATTGCAGGCATGTTGCCGA
AAAACTGCGCACCAGAGGGGTGAGCTGCGCTGGCGCGTGTGCTTGTGTTG
CGTTGGTTGTGCGACAGGAAAATCAGTCAAAACTCAAAGCCAGTTGTGAA
ACAGCAACCCCACTCCTGCTGGAGAACACGAGCACATGCGTTCCTGAAGG
GGGTGGTGCAGTGATGGACGTCGGCGAGCGAGAGCAAGTCGGGCGCTCGA
CGCACGGCATGCGTGCCCTAGTGTTGCCCCACTGCTCTCCTCACACCTCT
ATGCACCCACCCGGTGCTCACTTGCACGCACTCAAAAGCACGTTGGCTAG
TCACTGCAGCCATGCGCATGCACACGTCGATTGACTTGACCGCTGGGCTG
TGCGCGCCGCCGGCAAGCCTTGCCTGGCCCAACTACCCCATATGTGCCCC
CCCCGTGCTCCCACGCGGACGCGCATGAGTACGCCAGCTGTCGCACTGAT
GAGCCCACGTGGACAGTCACAACAATCGACTGCGTTGCCGGGGCTGCGCG
CAGGTGCACGAGCCCGCGGGCGAGGACGGCAAGCTGAGCGCGCGCGCCAG
CGCTCAGGCGCAGGCCGACAACATGGAGAAGCTCCTGCAGGTCGCCGACA
CAAAACCCACGCCGGCGTGA

Coding sequence (CDS) from alignment at Contig_66:43539..53358+

>mRNA_9637 ID=mRNA_9637|Name=jgi.p|Trimin1|169764|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1977bp|location=Sequence derived from alignment at Contig_66:43539..53358+ (Tribonema minus UTEX_B_3156 )
ATGCGGGGCAGCATTGGCGGGGGCAATCCGCTCAATGCCCTGGAAGATGA
AGATCTGTACCAGGAGCCTGTCAGGCAGATCATCAAGCCGTTGAACCAGC
TTGATCTTAGTGAAGCAGAACTCAGGGAGGAACATACGAGAGTACTTACA
GCCACGGACCCAAATGTCCCCAATAACGTCACAAAGTACAACTACAAGGA
CCGCATGTACAAAATTGACCCCCCGGGGCCTGGCGACCACCTGGCGGTTC
ACTTCAGCATGGATGGGTGCCTGCTGTTCAGGGAGCTGGATGAGGCAAAG
CAGCAGCTGGCGTACATGGAGAAAAAAAGGGAGGAGGAAGAGGAGGCCAA
GCGCGCCGCTGCGGCGGCGGCGGCGGAGGCGGGAGAGGAGGAGCCGGAGG
CAGACGGGGGGGCGGGGGGGAAGGGCGGCAAGAACCAGTTCAACTACTCG
GAGCGTGCGGCGCAGACGTTCACCAATCCCATGCGCGACAGGGGGGTGGC
GACGGAGCCGCCGCCGATGGTCAACTTCAGCTCCACCATCGCGCAGTGGG
AGATCTACGACCACTACATGCAGGAGTACGCGGCGTCGCAGCAGGAGGCG
GAGCACGAGGCGGCGCGCCGCGGCATACGCCGGCCGGATGGGGGGGGGGG
GGGGCGCGGGCGGGGGAGGGGGGGGGGGGACGACACCGTCCACTCTGCGA
AGATGGGCGGCGTGTTGAAGATGCTGGAGCGCATGGCCAATCAGAACGCG
GAGGATGAGATCTTCCAGGACTTCAAGTACTGGGAGGACGCGTCGGACCA
GTTCCGCGAGGGCGAGGGGAGCCTGCTGCCGCTGTGGCGCTTTAGCACGG
AGCGCACCAAGAAGAAGCAGGTCACCGCGCTCTGCTGGAACCCGCGCTAC
CCCGACCTGTTTGCCGTCGGTTACGGCAGTTACGACTTCCTGCGCCAGGG
CAGCGGCCTCGTGGCGTGCTTCTCGCTCAAAAACACGGGCAGCCCCGAGT
ACACGCTCGCTACGGAGTCCGGCGTCATGTGCCTGGACTTCCACCCGCTG
CACCACTCGCTGCTGGCGGTGGGCTGCTACGACGGCACCGTGATGGTGTT
CGACGTGCGCCAGCGCCGCGGCGCGCCCATCTACAGCTCCTCCATCAAGA
CGGGCAAGCACACGGACCCGGTGTGGCAGGTGCACTGGCAGTGCGACGAG
CAGCCGAAGGAGTTGAACTTCTACTCCGTCTCCTCCGACGGCCGCGTTGC
CAACTGGATCATGAGCAAGAACGAGCTCAAGATGGAGCCGGTCATGCAGC
TCAAGCTCGTCGGCGGGGCGCGGGAGGAGCCGGAGGTGCGTCACCCCCTC
AACGGCCTCGCGGGCGGCTGCTGCTTCGACTTCAACCGCCACGCGGAGCA
CCTGTTCATCGTCGGCACGGAGGAGGGGCGCGTGCACAAGTGCAGCAAGG
CGTACTCCGGCCAGTACCTGCAGACGTACGAGGGGCACAACATGGCGGTC
TACGCGCTGCGCTGGAACCCGTTCCACCCGCGCGTGTTCCTGTCGTGCAG
CGCGGACTGGACGGTCAAGCTCTGGGACCACGCGCTGCCGCAGCCCGTCA
TGTCCTTCGACCTCGGCAACGCGGTCGGCGACGTGTGCTGGTCGCCGTAC
TCAGCGACCGTCTTTGCCGCCGTCACCAGCGACGGCAAGGTGCACGTCTT
CGACCTCGCGCAGAACAAGCACGAGCCCATCTGCGAGCAGAAGGTGGTGA
AGCGTTCGCGCCTGACGCACGTGTGCTTCAACCTGAGGGACCCCATCATC
ATCGTGGGCGACGACCGTGGGGGCGTCAACTCCTTGAAGTTGTCGCCGAA
CTTGCGCAAGGTGCACGAGCCCGCGGGCGAGGACGGCAAGCTGAGCGCGC
GCGCCAGCGCTCAGGCGCAGGCCGACAACATGGAGAAGCTCCTGCAGGTC
GCCGACACAAAACCCACGCCGGCGTGA