mRNA_9602 (mRNA) Tribonema minus UTEX_B_3156
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Overview
Homology
BLAST of jgi.p|Trimin1|348658 vs. uniprot
Match: A0A836CF13_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CF13_9STRA) HSP 1 Score: 3023 bits (7838), Expect = 0.000e+0 Identity = 1947/1947 (100.00%), Postives = 1947/1947 (100.00%), Query Frame = 1
Query: 1 MLEAYPKEGLSFEENERLHATVAELRRAVPSVAKLVALEVGLERTAAEDKGRRALELLRRKDATIRQLQQRLRTGAFKGSTDEHQQQQQQQXXXXXXXXXXXXXXXXXXXXXXXHAAELQAALDASNNEAAELRKQGREQAQALQALLDEVARLRHQAATSDCAATAGDDDAAALRKKLTDVEVERLERLQATAKQTVLASESALKQAVSQLQAQGTTAAAIASASAPERLKEQHQLREQLASSKERALLGVYLGELSLEVKRLRQALHDQSLALALAKQGELRIEAEARAKDRAWADKTAVLSAANAALAQGLETAKRAGAAQLELQRRTIDTLRGRGDLAAALAAARAELSRESEARVSAQGDAAVQRQEALDRRAVAATVAEPDASAAACGVTASTLLDHFAGTAAAQALRIKQLTHDNTKLKDVVRRHDGNAGAGSARIDSGGGTDAWSAALSSAACSALRLRAEALEKELEEAPXXXXXXXXXXXXXXXXRDEALSTAEVDLLSAREEIEALRAALADLRNADAIGGHVSQRQQGASAESTLAAEIQSLRSLLDERESQVRVLTASVEALQGTTTCSAAAEAGSDGEGLESGLAVLSRLGAQGMLKHCIGLTIQRRLQATLSSLKAEQSTKERAVAELRALRDEGRQRIGDAVEENRRLRLSLAQAHKNCVRETERAAKAVAEASTWEATARDARERHARDMTTAMKDANQRVQEALERAFATHNDSSSAMARAVQDAVHEWTRDSSNAQSSRGKSGLPRRAVHTFQTIAATLDATTQSAVRKSRWLEWDARRLRQLLAAEKMRCEEQAAEIARLAGVLEVTQRVRAAAAAAAEGGEVFDFCAPMISMHAEQEMDLLDAAAARAGAEVKAAQALERAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSGGASDTDLRKYLLQNIESWWECPGQPMRSPAWGGDLQLTPQDAMAAALVASKLDAVQHEGRLDRAIRARDTAAAHARGGADAVLREWEALAAETARLRQQLSTAQGQLTSMGAQAARQACAMRQLRALCDRLRADESRARETLADRLSGVRQELGRRFVLGEVKETLAEERLRFTREVAAQTAETMRLRAEITQLKLRLQRVAADLAEQLRVEQRGRRDAEAECDRLATECAKLKSQLRGLGDHADAQRQALDHLQKQLEKCAAAVGYVLGDVLPVGAPPPGPLAKALVEAKVAMADLDRRLRATAAGETRVRRMLARRDRRIAEAQSGGIIVIWRWCSDLEAFDPSVPAAKLWKRVSDQTAIIHSLELQLAEAVAGGGGQRSTAARDHRDAEDPIGGCPVCAALREQLRDAEARRIKAESERDTIVTSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSERLPAAEIARLASRVEDLSQELAEEQARNTRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLQVEHELSALRLKFARGKFSAATPPAQELLEQLAEMRRSAKAEATKLRSQLAAASAALKAKPTKADMEALVQEVERRARTTAVLRGAQLAEEAKVTALKSRMQELELQLQQSQRDVQAKTSLVSDLKRKREELEASLAAATAHARATSVARGGFASAEEATALKDKLKALTTERGRLRTQQKAAESXXXXXXXXXXXXXXXXKMAALNQEFLQHKAAVAAWQQDAHASLQESDQEAGLCQRATHAIAQKLSALQSALVTALQALYDDALAATSTVXXXXXXXXXXXXXXXXXXXXXXXXXXXTVDEVDNIVGAERAQERAAFAAHARAAAEAGDAALLSAVLYALRDVQHAAAXXXXXXXXXXXXXXXXGLSPMPATAPQSPDNREAERASFEQQQQQWPRQQDSLLQSPNPLQRSPVQSPPQRRRHADMQSPRLQQPPPYPLPHSPISARMSQVSSFASFDDDGSDVDIDAVGDFDPDTEPPLVSVPPGKGGMGGWFEVEGQVLDDS 5841
MLEAYPKEGLSFEENERLHATVAELRRAVPSVAKLVALEVGLERTAAEDKGRRALELLRRKDATIRQLQQRLRTGAFKGSTDEHQQQQQQQXXXXXXXXXXXXXXXXXXXXXXXHAAELQAALDASNNEAAELRKQGREQAQALQALLDEVARLRHQAATSDCAATAGDDDAAALRKKLTDVEVERLERLQATAKQTVLASESALKQAVSQLQAQGTTAAAIASASAPERLKEQHQLREQLASSKERALLGVYLGELSLEVKRLRQALHDQSLALALAKQGELRIEAEARAKDRAWADKTAVLSAANAALAQGLETAKRAGAAQLELQRRTIDTLRGRGDLAAALAAARAELSRESEARVSAQGDAAVQRQEALDRRAVAATVAEPDASAAACGVTASTLLDHFAGTAAAQALRIKQLTHDNTKLKDVVRRHDGNAGAGSARIDSGGGTDAWSAALSSAACSALRLRAEALEKELEEAPXXXXXXXXXXXXXXXXRDEALSTAEVDLLSAREEIEALRAALADLRNADAIGGHVSQRQQGASAESTLAAEIQSLRSLLDERESQVRVLTASVEALQGTTTCSAAAEAGSDGEGLESGLAVLSRLGAQGMLKHCIGLTIQRRLQATLSSLKAEQSTKERAVAELRALRDEGRQRIGDAVEENRRLRLSLAQAHKNCVRETERAAKAVAEASTWEATARDARERHARDMTTAMKDANQRVQEALERAFATHNDSSSAMARAVQDAVHEWTRDSSNAQSSRGKSGLPRRAVHTFQTIAATLDATTQSAVRKSRWLEWDARRLRQLLAAEKMRCEEQAAEIARLAGVLEVTQRVRAAAAAAAEGGEVFDFCAPMISMHAEQEMDLLDAAAARAGAEVKAAQALERAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSGGASDTDLRKYLLQNIESWWECPGQPMRSPAWGGDLQLTPQDAMAAALVASKLDAVQHEGRLDRAIRARDTAAAHARGGADAVLREWEALAAETARLRQQLSTAQGQLTSMGAQAARQACAMRQLRALCDRLRADESRARETLADRLSGVRQELGRRFVLGEVKETLAEERLRFTREVAAQTAETMRLRAEITQLKLRLQRVAADLAEQLRVEQRGRRDAEAECDRLATECAKLKSQLRGLGDHADAQRQALDHLQKQLEKCAAAVGYVLGDVLPVGAPPPGPLAKALVEAKVAMADLDRRLRATAAGETRVRRMLARRDRRIAEAQSGGIIVIWRWCSDLEAFDPSVPAAKLWKRVSDQTAIIHSLELQLAEAVAGGGGQRSTAARDHRDAEDPIGGCPVCAALREQLRDAEARRIKAESERDTIVTSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSERLPAAEIARLASRVEDLSQELAEEQARNTRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLQVEHELSALRLKFARGKFSAATPPAQELLEQLAEMRRSAKAEATKLRSQLAAASAALKAKPTKADMEALVQEVERRARTTAVLRGAQLAEEAKVTALKSRMQELELQLQQSQRDVQAKTSLVSDLKRKREELEASLAAATAHARATSVARGGFASAEEATALKDKLKALTTERGRLRTQQKAAESXXXXXXXXXXXXXXXXKMAALNQEFLQHKAAVAAWQQDAHASLQESDQEAGLCQRATHAIAQKLSALQSALVTALQALYDDALAATSTVXXXXXXXXXXXXXXXXXXXXXXXXXXXTVDEVDNIVGAERAQERAAFAAHARAAAEAGDAALLSAVLYALRDVQHAAAXXXXXXXXXXXXXXXXGLSPMPATAPQSPDNREAERASFEQQQQQWPRQQDSLLQSPNPLQRSPVQSPPQRRRHADMQSPRLQQPPPYPLPHSPISARMSQVSSFASFDDDGSDVDIDAVGDFDPDTEPPLVSVPPGKGGMGGWFEVEGQVLDDS
Sbjct: 1 MLEAYPKEGLSFEENERLHATVAELRRAVPSVAKLVALEVGLERTAAEDKGRRALELLRRKDATIRQLQQRLRTGAFKGSTDEHQQQQQQQXXXXXXXXXXXXXXXXXXXXXXXHAAELQAALDASNNEAAELRKQGREQAQALQALLDEVARLRHQAATSDCAATAGDDDAAALRKKLTDVEVERLERLQATAKQTVLASESALKQAVSQLQAQGTTAAAIASASAPERLKEQHQLREQLASSKERALLGVYLGELSLEVKRLRQALHDQSLALALAKQGELRIEAEARAKDRAWADKTAVLSAANAALAQGLETAKRAGAAQLELQRRTIDTLRGRGDLAAALAAARAELSRESEARVSAQGDAAVQRQEALDRRAVAATVAEPDASAAACGVTASTLLDHFAGTAAAQALRIKQLTHDNTKLKDVVRRHDGNAGAGSARIDSGGGTDAWSAALSSAACSALRLRAEALEKELEEAPXXXXXXXXXXXXXXXXRDEALSTAEVDLLSAREEIEALRAALADLRNADAIGGHVSQRQQGASAESTLAAEIQSLRSLLDERESQVRVLTASVEALQGTTTCSAAAEAGSDGEGLESGLAVLSRLGAQGMLKHCIGLTIQRRLQATLSSLKAEQSTKERAVAELRALRDEGRQRIGDAVEENRRLRLSLAQAHKNCVRETERAAKAVAEASTWEATARDARERHARDMTTAMKDANQRVQEALERAFATHNDSSSAMARAVQDAVHEWTRDSSNAQSSRGKSGLPRRAVHTFQTIAATLDATTQSAVRKSRWLEWDARRLRQLLAAEKMRCEEQAAEIARLAGVLEVTQRVRAAAAAAAEGGEVFDFCAPMISMHAEQEMDLLDAAAARAGAEVKAAQALERAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSGGASDTDLRKYLLQNIESWWECPGQPMRSPAWGGDLQLTPQDAMAAALVASKLDAVQHEGRLDRAIRARDTAAAHARGGADAVLREWEALAAETARLRQQLSTAQGQLTSMGAQAARQACAMRQLRALCDRLRADESRARETLADRLSGVRQELGRRFVLGEVKETLAEERLRFTREVAAQTAETMRLRAEITQLKLRLQRVAADLAEQLRVEQRGRRDAEAECDRLATECAKLKSQLRGLGDHADAQRQALDHLQKQLEKCAAAVGYVLGDVLPVGAPPPGPLAKALVEAKVAMADLDRRLRATAAGETRVRRMLARRDRRIAEAQSGGIIVIWRWCSDLEAFDPSVPAAKLWKRVSDQTAIIHSLELQLAEAVAGGGGQRSTAARDHRDAEDPIGGCPVCAALREQLRDAEARRIKAESERDTIVTSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSERLPAAEIARLASRVEDLSQELAEEQARNTRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLQVEHELSALRLKFARGKFSAATPPAQELLEQLAEMRRSAKAEATKLRSQLAAASAALKAKPTKADMEALVQEVERRARTTAVLRGAQLAEEAKVTALKSRMQELELQLQQSQRDVQAKTSLVSDLKRKREELEASLAAATAHARATSVARGGFASAEEATALKDKLKALTTERGRLRTQQKAAESXXXXXXXXXXXXXXXXKMAALNQEFLQHKAAVAAWQQDAHASLQESDQEAGLCQRATHAIAQKLSALQSALVTALQALYDDALAATSTVXXXXXXXXXXXXXXXXXXXXXXXXXXXTVDEVDNIVGAERAQERAAFAAHARAAAEAGDAALLSAVLYALRDVQHAAAXXXXXXXXXXXXXXXXGLSPMPATAPQSPDNREAERASFEQQQQQWPRQQDSLLQSPNPLQRSPVQSPPQRRRHADMQSPRLQQPPPYPLPHSPISARMSQVSSFASFDDDGSDVDIDAVGDFDPDTEPPLVSVPPGKGGMGGWFEVEGQVLDDS 1947 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|348658 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_9602 ID=mRNA_9602|Name=jgi.p|Trimin1|348658|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=5865bp|location=Sequence derived from alignment at Contig_29:790669..842791+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGCTGGAGGCCTATCCCAAGGAGGGACTGAGCTTCGAGGAGAACGAGCGback to top protein sequence of jgi.p|Trimin1|348658 >Trimin1|348658|estExt_Genemark1.C_Ctg_290096 ID=Trimin1|348658|estExt_Genemark1.C_Ctg_290096|Name=jgi.p|Trimin1|348658|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=1948bp MLEAYPKEGLSFEENERLHATVAELRRAVPSVAKLVALEVGLERTAAEDKback to top mRNA from alignment at Contig_29:790669..842791+ Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_9602 ID=mRNA_9602|Name=jgi.p|Trimin1|348658|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=52123bp|location=Sequence derived from alignment at Contig_29:790669..842791+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_29:790669..842791+ >mRNA_9602 ID=mRNA_9602|Name=jgi.p|Trimin1|348658|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=5844bp|location=Sequence derived from alignment at Contig_29:790669..842791+ (Tribonema minus UTEX_B_3156 )back to top |