mRNA_9549 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|164087 vs. uniprot
Match: A0A835Z1L1_9STRA (D5_N domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1L1_9STRA) HSP 1 Score: 789 bits (2037), Expect = 1.440e-288 Identity = 388/388 (100.00%), Postives = 388/388 (100.00%), Query Frame = 1 Query: 1 MGVVHCLTALVRDKTFLNLLDADKDVLSVTDGVVDLRTATLRPRVRGDYLIYALSTPFDPEHPELHTIEKWMKDVTLSERLGRPEYLEFMQRLIGYSITGHTREEIIVMFIGNGANSKGVLHELLSDVLESLYYAAPRSIIVQTARGGAGAASSDMAALNGKRIGAVDEMPDEPLNDTQFRLLAGGAGIPARELYSAQASFKNLCQIILNFNFPVQMRITHATLRRIMACPFDMQALPVVPMSGAALDPTNPRHILLDIKMKGNLSRAAFFSWAVAGAKKWYEEGLGPHPKCCADLRSHIMDDNADVGMWIAERCEVGEGLMASTKMAWNDFCASRPEGNNITNASFRVEMGRRGFHIAQATRTQLRDKRCCHGLKIAGHIYDQNAAV 1164 MGVVHCLTALVRDKTFLNLLDADKDVLSVTDGVVDLRTATLRPRVRGDYLIYALSTPFDPEHPELHTIEKWMKDVTLSERLGRPEYLEFMQRLIGYSITGHTREEIIVMFIGNGANSKGVLHELLSDVLESLYYAAPRSIIVQTARGGAGAASSDMAALNGKRIGAVDEMPDEPLNDTQFRLLAGGAGIPARELYSAQASFKNLCQIILNFNFPVQMRITHATLRRIMACPFDMQALPVVPMSGAALDPTNPRHILLDIKMKGNLSRAAFFSWAVAGAKKWYEEGLGPHPKCCADLRSHIMDDNADVGMWIAERCEVGEGLMASTKMAWNDFCASRPEGNNITNASFRVEMGRRGFHIAQATRTQLRDKRCCHGLKIAGHIYDQNAAV Sbjct: 1 MGVVHCLTALVRDKTFLNLLDADKDVLSVTDGVVDLRTATLRPRVRGDYLIYALSTPFDPEHPELHTIEKWMKDVTLSERLGRPEYLEFMQRLIGYSITGHTREEIIVMFIGNGANSKGVLHELLSDVLESLYYAAPRSIIVQTARGGAGAASSDMAALNGKRIGAVDEMPDEPLNDTQFRLLAGGAGIPARELYSAQASFKNLCQIILNFNFPVQMRITHATLRRIMACPFDMQALPVVPMSGAALDPTNPRHILLDIKMKGNLSRAAFFSWAVAGAKKWYEEGLGPHPKCCADLRSHIMDDNADVGMWIAERCEVGEGLMASTKMAWNDFCASRPEGNNITNASFRVEMGRRGFHIAQATRTQLRDKRCCHGLKIAGHIYDQNAAV 388
BLAST of jgi.p|Trimin1|164087 vs. uniprot
Match: A0A835Z1H9_9STRA (SF3 helicase domain-containing protein (Fragment) n=6 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1H9_9STRA) HSP 1 Score: 203 bits (516), Expect = 2.470e-58 Identity = 133/362 (36.74%), Postives = 190/362 (52.49%), Query Frame = 1 Query: 31 VRDKTFLNLLDADKDVLSVTDGVVDLRTATLRPRVRGDYLIYALSTPFDPEHPELHTIEKWMKDVTLS--ERLGRPEYLEFMQRLIGYSITGHTREEIIVMFIGNGA-NSKGVLHELLSDVLESLYYAAPRSIIVQTARGGAGAASSDMAALNGKRIGAVDEMPDEPLNDTQF-RLLAGGAGIPARELYSAQASFKNLCQIILNFNFPVQMRITHATLRRIMACPFDMQALPVVPMSGAA---LDPTNPRHILLDIKMKGNLSRAAFFSWAVAGAKKWYEEGLGPHPKCCADLRSHIMDDNADVGMWIAERCEVG--EG------LMASTKMAWNDFCASR-PEGNNITNASFRVEMGRRGF 1068 VRD+ F LLD +KD+ S +GVV+L TATLRPRVR D L A++ ++ + P + + + + D+TL+ RL RP LE + R++GYSITGH REEIIV +G A N KG++ LL VL ++Y AP+S + AG+ASS M AL G R+ +DE+P D Q + ++GGA I REL+ Q SF N N ++ A ++RI P D + G A D + H + + K++ NL AF + V AK+WYE GLG P CC +N + WI + CE+G EG L +S +N++ A + P I +M +GF Sbjct: 7 VRDEDFEKLLDVNKDIFSCQNGVVELATATLRPRVRKDMLTRAVNIDYNADSPRIPEVMQLLTDITLAAPNRLNRPALLERLLRILGYSITGHVREEIIVFLLGRSARNGKGIIESLLQQVLGCMFYQAPQSFLTACKAVSAGSASSHMMALRGARVVHLDELPAGVALDAQMIKYISGGADISGRELFGTQTSFSPTAVPWANTNEMPIIKAEPAIMQRIEIIPCDAKFR----TPGDAKFPYDANDKTHFIKNTKLRENLPVEAFLAGVVQAAKRWYEGGLGEKPACCKLACDAFAAENDTLQSWINDECELGPREGADPALILCSSAFSGYNNYRARQEPALPPIKKRDMHEQMAAKGF 364
BLAST of jgi.p|Trimin1|164087 vs. uniprot
Match: A0A835YS19_9STRA (D5_N domain-containing protein n=5 Tax=Tribonema minus TaxID=303371 RepID=A0A835YS19_9STRA) HSP 1 Score: 188 bits (477), Expect = 4.450e-49 Identity = 136/387 (35.14%), Postives = 193/387 (49.87%), Query Frame = 1 Query: 31 VRDKTFLNLLDADKDVLSVTDGVVDLRTATLRPRVRGDYLIYALSTPFDPEHPELHTIEKWMKDVTLS--ERLGRPEYLEFMQRLIGYSITGHTREEIIVMFIGNGA-NSKGVLHELLSDVLESLYYAAPRSIIVQTARGGAGAASSDMAALNGKRIGAVDEMPDEPLNDTQFRLLAGGAGIPARELYSAQASFKNLCQIILNFNFPVQMRITHATLRRIMACPFDMQALPVVPMSGAA---LDPTNPRHILLDIKMKGNLSRAAFFSWAVAGAKKWYEEGLGPHPKCCADLRSHIMDDNADVGMWIAERCEVG--EG------LMASTKMAWNDFCASR-PEGNNITNASFRVEMGRRGF-HIAQATRTQLRDK-RCCH-GLKIAG 1137 +RD+ F LLD +KD+ S +GVV+L TATLRPRVR D L A++ ++ + P + + + + D+TL+ RL RP LE + R++GYSITGH REEIIV +G A N KG++ LL VL ++Y AP+S + AGAASS M AL VD + ++GGA I REL+ Q SF N N ++ A ++RI P D + G A D + H + + K++ NL AF + V AK+WYE GLG P CC +N + WI + CE+G EG L +S +N+ A + P I +M +GF I + +D +C + GLK AG Sbjct: 612 IRDEDFEKLLDVNKDIFSCQNGVVELATATLRPRVRKDMLTRAVNIDYNADSPRIPEVMQLLTDITLAAPNRLNRPALLERLLRILGYSITGHVREEIIVFLLGCSARNGKGIIESLLQQVLGCMFYQAPQSFLTACKAVSAGAASSHMMALRATGGRCVDAQ--------MIKYISGGADISGRELFGKQTSFSPTAVPRANTNEMPIIKAEPAIMQRIEIIPCDAKFR----TPGDAKFPYDANDKTHFIKNTKLRENLPVEAFLAVVVQAAKRWYEGGLGEKPACCKLACDAFAAENDTLQSWINDECELGPREGADPALILCSSAFSGYNNSRARQEPALPPIKKRDMHEQMAAKGFAKIDDYRKAHSQDNCKCVYAGLKSAG 986
BLAST of jgi.p|Trimin1|164087 vs. uniprot
Match: A0A835Z0P8_9STRA (SF3 helicase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0P8_9STRA) HSP 1 Score: 154 bits (388), Expect = 2.470e-37 Identity = 107/392 (27.30%), Postives = 183/392 (46.68%), Query Frame = 1 Query: 37 DKTFLNLLDADKDVLSVTDGVVDLRTATLRPRVRGDYLIYALSTPFDPEHPELHTIEKWMKDVTLSERL-------------------GRPEYLEFMQRLIGYSITGHTREEIIVMFIGNGANSKGVLHELLSDVLESLYYAAPRSIIVQTARGGAGAASSDMAALNGKRIGAVDEMPDE-PLNDTQFRLLAGGAGIPARELYSAQ-ASFKNLCQIILNFNFPVQMRITHATLRRIMACPFDMQALPVVPMSGAALDPTNPRHILLDIKMKGNLSRAAFFSWAVAGAKKWYEEGLGPHPKCCADLRSHIMDDNADVGMWIAERCEVGEGLMASTKMAWNDFCAS------RPEGNNITNASFRVEMGRRGFHIAQATRTQLRDKRCCHGLKI 1131 D+ F LD + ++LSV +GVVDLRT LR R DY YA+ P+ P+H L + + ++ +TL++R G + + +QR++GYSITG+ R + + F+G G+N K + L + +Y A ++ + G AS + AL GKR+G + E + LN+ +R L G + AR LY SF+N C+I L N + ++ +++RR+ A F+ + +P P + D T+P H L + LSR A+ ++ + GA + +G P C I ++ + + E + +G A +D + + G + +F+ M +GF +A + RDK L++ Sbjct: 452 DEDFAERLDRNPELLSVANGVVDLRTGQLRERRFDDYFTYAIEVPYVPDHEGLPAVVQLVRQMTLADRATEVKEGKWGSEWQASPIFDGCDKMPDMLQRVLGYSITGYIRHQALFAFLGGGSNGKSAITNLTKWAVRPIYTQASVDLLKHGSEN-TGGASPHIIALRGKRLGVISEWDSKYTLNERNYRTLTGDDELLARALYQKDLVSFENWCKIWLVVNELPNLDLSLSSMRRLFAMWFEAKFVPDDPSAPVPFDKTDPTHFLQVQDFEKGLSREAWLAFMIEGAGMYLADGFPAKPPCMTRFMDQIRSESDPLSGFFDEHVDT-DGRTAEDAERVDDVYRAYASYVDKMRGKAMNIKAFKKAMDSKGFKCIRAKTQEHRDKWVFRRLRL 841
BLAST of jgi.p|Trimin1|164087 vs. uniprot
Match: A0A1Y1INW7_KLENI (SF3 helicase domain-containing protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1INW7_KLENI) HSP 1 Score: 132 bits (331), Expect = 3.290e-30 Identity = 112/363 (30.85%), Postives = 163/363 (44.90%), Query Frame = 1 Query: 37 DKTFLNLLDADKDVLSVTDGVVDLRTATLRPRVRGDYLIYALSTPFDPEHPELHTIEKWMKDVTLSERLGRPEYLEFMQRLIGYSITGHTREEIIVMFIGNGANSKGVLHELLSDVLESLYYAAPRSIIVQTARG----GAGAASSDMAALNGKRIGAVDEMPDEPLNDTQFRL-LAGGAGIPARELYSAQASFKNLCQIILNFNFPVQMRITHATL----RRIMACPFDMQALPVVPMSGAALDPTNPRHILLD----IKMKGNLSRAAFFSWAVAGAKKWYE--EGLGPHPKCCADLRSHIMDDNADVGMWIAERCEVGEGLMASTKMAWNDFCASRPEGNNITNASFRVEMGRRGFHIAQ 1080 D F LDAD D+L+V +GV+ LRT L + T F ++ ++ D+ + E ++++++L GY++ GHTREE+ V+ +G G N KG L E+L V Y + +V TA G A ++ + L GKR+ DE + D L + GG I AR L+ F + N+P + T A L RR+ A PF P + ALDPTN H L D +MK SR +W G+ +WY EGLG PK D + + + ++I + CEVGEGL ST A C + I+N M +GF A+ Sbjct: 204 DLDFAQQLDADPDILNVKNGVLLLRTGELDVHRPQYFCSKIAETDFMGMEYPTPRMDAFIGDIFNHDA----ELVDYIRKLFGYALNGHTREEVFVLLLGKGGNGKGALKEMLQAVAGDYYGTMSKDAVV-TAPGQRAPSKNAPTNYLYELMGKRLAITDETAEGEQVDLGLVLAVTGGGSIKARCLHINNVEFVVTHTPFVQTNYPPVISAT-AILDNVERRLRAIPF-----PNTYVRENALDPTNATHRLRDDHLKARMKEEESRRQILTWLARGSVEWYASAEGLGSPPKAVKDATDEYLREADKLQLFIDQHCEVGEGL--STLQAEFAACFRQYSSERISNEELMRRMATKGFKRAK 553
BLAST of jgi.p|Trimin1|164087 vs. uniprot
Match: A0A2J7ZPR0_9CHLO (Putative helicase n=1 Tax=Tetrabaena socialis TaxID=47790 RepID=A0A2J7ZPR0_9CHLO) HSP 1 Score: 130 bits (328), Expect = 1.840e-29 Identity = 108/351 (30.77%), Postives = 157/351 (44.73%), Query Frame = 1 Query: 46 FLNLLDADKDVLSVTDGVVDLRTATLRPRVRGDYLIYALSTPFDPEHPELHTIEKWMKDVTLSERLGRPEYLEFMQRLIGYSITGHTREEIIVMFIGNGANSKGVLHELLSDVLESLYYAAPRSIIVQTARGGAGAASSDMAALNGKRIGAVDEM-PDEPLNDTQFRLLAGGAGIPARELYSAQASF--KNLCQIILNFNFPVQMRITHATLRRIMACPFDMQALPVVPMSGAALDPTNPRHILLDIKMKGNLSR--AAFFSWAVAGAKKWYEEGLGPHPKCCADLR-----SHIMDDNADVGMWIAERCEVGEGLMASTKMAWNDFCASRPEGNNITNASFRVEMGRRGF 1068 F LD+ +L V +GVVDLRT LR R D L +DP+ K +V L+ E ++Q+L+GY ITG +E+ +F G+G N KGV+ + LS +L SLY II GA + A L G RI +E+ P E L + +LL+GG GIPA+ LY + ++LC + N + P + A + R++ PF + + GA +PT R D +K L + AA W V GA WY P K A L+ +D + +I +RC G L T + F G +++ MG +GF Sbjct: 423 FEQTLDSIPHLLGVQNGVVDLRTGELRQRRAADNLFAICPVHYDPD-----ASSKIFHEVILAAMADDEEMARYLQKLLGYGITGEVCQEVFPVFTGSGRNCKGVITQTLSSLLGSLYQEMEVGIITDRQVSNIGA---ERAKLLGARIALFNELRPKEKLKTNEVQLLSGGDGIPAKALYKDPMTLLPRHLCILSTN-HMPELSEVIPAIMERLLCVPFQVT---FTDLDGA--EPTLYRR-QCDTTLKTRLKQNPAAVLKWFVEGAVAWY---ASPDLKKTAPLKVRDFSRRYFEDQDKLACFIRDRCRTGSDLKTPTSVFLQSF--QEHAGVRLSSRELATVMGHKGF 753
BLAST of jgi.p|Trimin1|164087 vs. uniprot
Match: A0A1Y1IN63_KLENI (SF3 helicase domain-containing protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IN63_KLENI) HSP 1 Score: 130 bits (326), Expect = 3.940e-29 Identity = 113/364 (31.04%), Postives = 166/364 (45.60%), Query Frame = 1 Query: 37 DKTFLNLLDADKDVLSVTDGVVDLRTATLRPRVRGDYLIYALS-TPFDPEHPELHTIEKWMKDVTLSERLGRPEYLEFMQRLIGYSITGHTREEIIVMFIGNGANSKGVLHELLSDVLESLYYAAPRSIIVQTARG----GAGAASSDMAALNGKRIGAVDEMPDEPLNDTQFRL-LAGGAGIPARELYSAQASFKNLCQIILNFNFPVQMRITHATL----RRIMACPFDMQALPVVPMSGAALDPTNPRHILLDIKMKGNL----SRAAFFSWAVAGAKKWYE--EGLGPHPKCCADLRSHIMDDNADVGMWIAERCEVGEGLMASTKMAWNDFCASRPEGNNITNASFRVEMGRRGFHIAQ 1080 D F LDAD D+L+V +GV+ LRT L R Y+ ++ T F ++ ++ D+ + E ++++++L GY++ GHTREE+ V+ +G G N KG L E+L V Y + +V TA G A ++ + L GKR+ DE + D L + G I AR LY F + N+P + T A L RR+ A PF P + A DPTN H L D +KG + SR +W G+ +WY EGLG PK D + + ++I + CEVGEGL ST A C ++ I+ R M +GF A+ Sbjct: 660 DFDFAQQLDADPDILNVKNGVLLLRTGELDVH-RPQYMCSKIAETDFMGMEFPTPRMDAFIGDIFNHDA----ELVDYVRKLFGYALNGHTREEVFVLLLGKGGNGKGALKEMLQAVAGDYYGTMSKDAVV-TAPGQRAPSKNAPTNYLYELMGKRLAITDETAEGEQVDLGLVLAVTEGGSIKARCLYINNVEFVVTHTPFVQTNYPPVISAT-AILDNVERRLRAIPF-----PNTYVRANAFDPTNATHRLRDDNLKGRMKEEESRRQILTWLARGSVEWYASAEGLGSPPKAVKDATDEYLREADKFQLFIDQHCEVGEGL--STLQAEFAACYAQYSTERISYEELRRRMDTKGFKRAK 1009
BLAST of jgi.p|Trimin1|164087 vs. uniprot
Match: A0A1S1HQM3_PROST (SF3 helicase domain-containing protein n=3 Tax=Providencia TaxID=586 RepID=A0A1S1HQM3_PROST) HSP 1 Score: 124 bits (310), Expect = 4.220e-27 Identity = 99/387 (25.58%), Postives = 180/387 (46.51%), Query Frame = 1 Query: 1 MGVVHCLTALVRDKTFLNLLDADKD--VLSVTDGVVDLRTATLRPRVRGDYLIYALSTPFDPEHPELHTIEKWMKDVTLSERLGRPEYLEFMQRLIGYSITGHTREEIIVMFIGNGANSKGVLHELLSDVLESLYYAAPRSIIVQTARGGAGAASSDMAALNGKRIGAVDEMPDEP-LNDTQFRLLAGGAGIPARELYSA-QASFKNLCQIILNFNF-PVQMRITHATLRRIMACPFDMQALPVVPMSGAALDPTNPRHILLDIKMKGNLSRAAFFSWAVAGAKKWYEEGLGPHPKCCADLRSHIMDDNADVGMWIAERCEVGEGLMASTKMAWNDFCASRPEGNN--ITNASFRVEMGRRGFHIAQATRTQLRDKRCCHGLKIAGH 1140 + + + LV+ K + +D D D +L V +GV+DL T R R D++ F+P + + T E+++ D+T+ G E F+QRL+GY +TG T E+++ F G+G+N K +++ ++ S YA + V +G ++ +A L GKR+ +E+P+ L+DT + + GG + AR++Y + F++ +++ N P ++H RR+ PF + A +DP P + L +M+G L+ WA+AG + W+ EGL ++ +D+ E C + + ++ F + EGN +T F +M RGF + + +K G+ + H Sbjct: 441 LSKLKAMIELVKPKLEVRTIDLDADPMLLGVANGVIDLNTGEYRENRRLDFITRYTPVDFNP-NAKCPTWERFINDITV----GDMELASFLQRLVGYFLTGRTDEQLLFFFYGHGSNGKSTFIQIIQSLMGS--YATQINSDVLMMNKNSGGPNASLAKLPGKRLVVANELPENGRLDDTLIKAMTGGDTLVARQVYGKHELEFQSQFSLVIIGNHKPAIYDMSHGMWRRMCLIPFAAN------FTAAEIDPELP--VKLSREMQGILN------WALAGVQAWHAEGLKRSLPAAVIAANNEYRQESDLIGEFLEGCRLEPDAYTAASDLYSAFLSFASEGNEWRMTQRIFTKKMVERGFE-----KIRRNNKASFRGIALIDH 801
BLAST of jgi.p|Trimin1|164087 vs. uniprot
Match: A0A1Y1IPQ1_KLENI (SF3 helicase domain-containing protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IPQ1_KLENI) HSP 1 Score: 118 bits (296), Expect = 7.850e-27 Identity = 93/290 (32.07%), Postives = 133/290 (45.86%), Query Frame = 1 Query: 253 EYLEFMQRLIGYSITGHTREEIIVMFIGNGANSKGVLHELLSDVLESLYYAAPRSIIVQTARG----GAGAASSDMAALNGKRIGAVDEMPDEPLNDTQFRLLAGGAGIP-ARELYSAQASFKNLCQIILNFNFPVQM---RITHATLRRIMACPFDMQALPVVPMSGAALDPTNPRHILLDI----KMKGNLSRAAFFSWAVAGAKKWYE--EGLGPHPKCCADLRSHIMDDNADVGMWIAERCEVGEGLMASTKMAWNDFCASRPEGNNITNASFRVEMGRRGFHIAQ 1080 E ++++++L GY+I GHTRE+I V+ +G G N KG L E+L V+ Y + +V TA G A ++ + L G R+ DE +E D L G+G AR L++ F + N+P + I RR+ A PF P + A DPTN H L D +MK SR SW G+ +WY+ EGLG PK D + + + M+I + CEVGEGL ST A C + I+ R M +GF A+ Sbjct: 14 ELVDYVRKLFGYAINGHTREDIFVLLLGAGGNGKGALKEMLQAVVGDYYGTMSKDAVV-TAPGQKASSKNAPTNHIYELMGVRLAVTDETAEEDQVDLGIVLAMTGSGTTKARCLHTNNVEFTVTHTPFVQTNYPPAICATAIKDNVERRLRAIPF-----PNTYVDANAFDPTNVTHRLRDNHLKERMKEEESRRQILSWLARGSVEWYDSAEGLGSPPKAVKDATDEYLREADKLQMFIDQHCEVGEGL--STLQAEFAACYGQYSSKRISYEELRRRMDTKGFKRAK 295
BLAST of jgi.p|Trimin1|164087 vs. uniprot
Match: UPI001009C8A5 (phage/plasmid primase, P4 family n=1 Tax=Bradyrhizobium guangzhouense TaxID=1325095 RepID=UPI001009C8A5) HSP 1 Score: 120 bits (302), Expect = 1.580e-26 Identity = 96/348 (27.59%), Postives = 158/348 (45.40%), Query Frame = 1 Query: 58 LDADKDVLSVTDGVVDLRTATLRPRVRGDYLIYALSTPFDPEHPELHTIEKWMKDVTLSERLGRPEYLEFMQRLIGYSITGHTREEIIVMFIGNGANSKGVLHELLSDVLESLYYAAPRSIIVQTARGGAGAASSDMAALNGKRIGAVDEMPD-EPLNDTQFRLLAGGAGIPARELYSAQASFKNLCQIILNFNF-PVQMRITHATLRRIMACPFDMQALPVVPMSGAALDPTNPRHILLDIKMKGNLSRA-AFFSWAVAGAKKWYEEGLGPHPKCCADLRSHIMDDNADVGMWIAERCEVGEGLMASTKMAWNDF--CASRPEGNNITNASFRVEMGRRGFHIAQAT 1086 LDAD +L V +G V+L+T R R D + +D + ++++ VT ++ + ++QR+IGY +TG REE + + G+G N K E + D++ + A +++V+ R G+AS ++A L GKR AV+E + + LN+++ + + I AR LY F ++ L N PV RR+ PF + NP + D + K + +WA+ G + GL P A + + D + VG WIAERC +G + A+ND+ A+ G ++T FR + RGF A+ T Sbjct: 127 LDADPWLLGVKNGAVELKTGAFRLARRSDLITKCAGVAYDAA-ADCPCWKQFLATVTAND----VDLQHYLQRVIGYVLTGSVREEAMWVLYGSGRNGKSTFRETIHDLIGTYSLAGDATLMVE--RKTPGSASEEIARLKGKRFIAVNETAENDQLNESRLKFITSQDMITARNLYGHFFDFFPTHKLFLTTNHKPVVRGTDEGIWRRLQLVPFVVSI--------------NPNAVERDFREKRLVPELPGILNWALTGLSDYLTHGLNPPGSVLASTQEYRSDMDV-VGQWIAERCRAEQGASMPSGHAYNDYQTWANEELGWSLTKLKFRRHLTDRGFTAAKGT 452 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|164087 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_9549 ID=mRNA_9549|Name=jgi.p|Trimin1|164087|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1167bp|location=Sequence derived from alignment at Contig_29:116896..118062- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGGGCGTCGTGCACTGCCTGACGGCTCTCGTGCGCGACAAGACCTTCCTback to top protein sequence of jgi.p|Trimin1|164087 >Trimin1|164087|e_gw1.29.2.1 ID=Trimin1|164087|e_gw1.29.2.1|Name=jgi.p|Trimin1|164087|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=389bp MGVVHCLTALVRDKTFLNLLDADKDVLSVTDGVVDLRTATLRPRVRGDYLback to top mRNA from alignment at Contig_29:116896..118062- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_9549 ID=mRNA_9549|Name=jgi.p|Trimin1|164087|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1167bp|location=Sequence derived from alignment at Contig_29:116896..118062- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_29:116896..118062- >mRNA_9549 ID=mRNA_9549|Name=jgi.p|Trimin1|164087|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1167bp|location=Sequence derived from alignment at Contig_29:116896..118062- (Tribonema minus UTEX_B_3156 )back to top |