mRNA_9496 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|173796
Unique Name	mRNA_9496
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|173796 vs. uniprot
Match: A0A836CMU4_9STRA (Tfp pilus assembly protein PilF n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMU4_9STRA)

HSP 1 Score: 139 bits (349), Expect = 6.050e-30
Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 1

Query:    1 MQRRALAIEEKAYGSEHVKVAISLGNLGIVLFEIGDLQGAEGMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNTWATSLHNLAYELHDRQMLMEAAPLYHXXXXXXXEALGPKHPLTA 444
            MQRRALAIEEKAYGSEHVKVAISLGNLGIVLFEIGDLQGAEGMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNTWATSLHNLAYELHDRQMLMEAAPLYHXXXXXXXEALGPKHPLTA
Sbjct:    1 MQRRALAIEEKAYGSEHVKVAISLGNLGIVLFEIGDLQGAEGMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNTWATSLHNLAYELHDRQMLMEAAPLYHXXXXXXXEALGPKHPLTA 148

[Close]

BLAST of jgi.p|Trimin1|173796 vs. uniprot
Match: A0A835ZG95_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZG95_9STRA)

HSP 1 Score: 454 bits (1167), Expect = 1.060e-155
Identity = 402/402 (100.00%), Postives = 402/402 (100.00%), Query Frame = 1

Query:    1 MWHAGHRSGVGAVLRRSRAPIEQHASAVYTSKKQPLSGVRRDSGVGTGASAAADATADGAPGSDGALYAYVGGFAYGARDGAGVMVDGVKGESYEGEFREGRVTGVGRLTCANGDVWEGAFERGAPRGLVFFARKNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLLLAAGASHYVGQXXXXVKHGYGRYVFRCGDVYDGDFADDKARGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGEPYSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEFAFARRHGRGRHTWPDGVYYDGGFADGMAQGEGELVCRPPAGWEWGHRYRGLWHQNRSAPASCS 1206
            MWHAGHRSGVGAVLRRSRAPIEQHASAVYTSKKQPLSGVRRDSGVGTGASAAADATADGAPGSDGALYAYVGGFAYGARDGAGVMVDGVKGESYEGEFREGRVTGVGRLTCANGDVWEGAFERGAPRGLVFFARKNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLLLAAGASHYVGQXXXXVKHGYGRYVFRCGDVYDGDFADDKARGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGEPYSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEFAFARRHGRGRHTWPDGVYYDGGFADGMAQGEGELVCRPPAGWEWGHRYRGLWHQNRSAPASCS
Sbjct:    1 MWHAGHRSGVGAVLRRSRAPIEQHASAVYTSKKQPLSGVRRDSGVGTGASAAADATADGAPGSDGALYAYVGGFAYGARDGAGVMVDGVKGESYEGEFREGRVTGVGRLTCANGDVWEGAFERGAPRGLVFFARKNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLLLAAGASHYVGQXXXXVKHGYGRYVFRCGDVYDGDFADDKARGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGEPYSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEFAFARRHGRGRHTWPDGVYYDGGFADGMAQGEGELVCRPPAGWEWGHRYRGLWHQNRSAPASCS 402

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|173796 vs. uniprot
BLAST of jgi.p|Trimin1|173796 vs. uniprot

BLAST of jgi.p|Trimin1|173796 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A836CMU4_9STRA	6.050e-30	100.00	Tfp pilus assembly protein PilF n=1 Tax=Tribonema ...	[more]

BLAST of jgi.p|Trimin1|173796 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A835ZG95_9STRA	1.060e-155	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_106	contig	Contig_106:115714..122766 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|173796\|e_gw1.106.47.1
Hectar predicted targeting category	other localisation
TranscriptId	174118
Track	FilteredModels1
ProteinId	173796

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|173796	gene_9496	Tribonema minus UTEX_B_3156	gene	Contig_106 115714..122766 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|173796	Trimin1\|173796\|e_gw1.106.47.1	Tribonema minus UTEX_B_3156	polypeptide	Contig_106 115714..122766 -

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_9496_2	exon_9496_2	Tribonema minus UTEX_B_3156	exon	Contig_106 115714..118053 -
exon_9496_1	exon_9496_1	Tribonema minus UTEX_B_3156	exon	Contig_106 122458..122766 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_9496	CDS_9496	Tribonema minus UTEX_B_3156	CDS	Contig_106 122458..122766 -

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_106:115714..122766-
coding sequence from alignment at Contig_106:115714..122766-

spliced messenger RNA

>mRNA_9496 ID=mRNA_9496|Name=jgi.p|Trimin1|173796|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2649bp|location=Sequence derived from alignment at Contig_106:115714..122766- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGCAGCGGCGCGCGCTCGCCATCGAGGAGAAGGCGTACGGCAGTGAGCA
CGTGAAGGTCGCAATTAGTCTCGGCAATCTCGGCATTGTGCTCTTCGAAA
TAGGCGATTTGCAAGGTGCGGAGGGGATGCAGCGGCGCGCGCTCGCCATC
GAGGAGAAGGCGTACGGCACTGAGCACGTGGAGGTCGCGAAGACTCTCGG
CAATCTCGGCCTTGTGCTCCAAGCACAAGGCGATTTGAAGAGTGCAGAGG
GGATGCAGCGGCGCGCGCTCGCCATCACGGAGAAGGTGTACGGCACTGAG
CATGTGAACACCTGGGCCACAAGCCTTCATAACCTTGCTTACGAGTTGCA
TGACAGACAAATGCTGATGGAGGCGGCGCCCTTGTACCACCGCGCGCTTG
CCATTCGGGAAGAGGCGCTGGGCCCGAAGCATCCTTTGACAGCGACGTCG
CTCGACAACCTCGCGGGCCTCCTCGAAGCTCAAGGCGACTTGGCGGAAGC
GGCGCCGTTGTACGTGCGCGCGCTCGCCATTCGCGAGGAGGTGCTGGGCC
CGAAGCATCCCGACACGGCGACGTCGCTCAACAACCTCGCCACCTTACAT
CAAGCGCAGGGCAACTTTGCGGAGGCGGCGCCCTTGTACGCACGCGCGCT
CGCCATCCTCGAGGAGGCGCTGGGCCCGAAGCATCCCTCGACGGCGACGT
CGCTCAACAACCTCGCCGGCCTCCTCCGAGCGCAGGGCAACTTTGCGGAG
GCGGCGCCCTTGTACGTGCGCGCGCTCGCCATCAGCGAGGAGGCACTGGG
CCCCAAGCATCCTTCGACGGCGAAGTCGTGCGGTAACCTTGCCGCCCTCC
TCCAAGCGCAGGGCAACTGTGCGGAGGCGGCGCCCTTGTACGTGCGCGCG
CTCGCCATCACGGAGGAGGCGCTGGGCCCGAAGCATCCAGACACGGCGAC
GTCGCTCAACAACCTCGCTATGTTTCACGAAGCGCAGGGCAACTTTGCGG
AGGCTGCGCCCTTGTACGCGCGCGCGCTCGCTATCGAAGAGGAGGTGCTG
GGCCCGAAGCATCCTTCAACGACGACGTCACTCAACAACCTCGCTGTGCT
CATCGCAGCTCAAGGCGACTTGGCAAAAGCGGCACCCTTGTACGTGCGCG
CGCTCGCCGTCAGGGAGGAGGCGCTGGGCCCGAAGCATCCTTTGACAGCG
ACGTCGCTCGACAACCTCGCGGGCCTCCTCGAAGCTCAAGGCGACTTGGC
GGAAGCGGCGCCGTTGTACGTGCGCGCGCTCGCCATTCGCGAGGAGGTGC
TGGGCCCGAAGCATCCCGACACGGCGACGTCGCTCAACAACCTCGCCACC
TTACATCAAGCGCAGGGCAACTTTGCTGAGGCGGCGCACTTGTACGTGCG
TGCGCTCGCCATCAGGGAGGAGGCGCTGGGCCCGAAGCATCCAGACACGG
CGACGTCGCTCAACAACCTCGCTGTGTTTCATAAAGCGCAGGGCAACTTT
GCGGAGGCGGCGCCCTTGTACGTGCGCGCGCTCGCCATCACGGAGGAGGC
GCTGGGCCCGAAGCATCCCGACACGGCGACGTCGCTCAACAACCTCGCCA
CCTTACATCAAGCGCAGGGCAACTTTGCGAAAGCGGCGCACTTGTACGTG
CGTGCGCTCGCCATCAGTGAGGAGGCGCTGGGCCCGAAGCATCCTTCGAC
GGCGACGTCGCTCAACAACCTCGCTTCATTACATCAAGCGCAGGGCAACT
TTGCGGAGGCTGCGCCCTTGTACACGCGCGCGCTCGCCATCAGGGAGGAG
GCGTTGGGCCCGAAGCATCCAGACACGGCGACGTCGCTCAACAACCTCGC
TTCGTTACATGAAGCGCAGGGCAACTTTGCGGAGGCGGCTCCCTTGTACG
TGCGCGCGCTCGCCATCAGGGAGGAGGCACTGGGCCCGAAGCATCCCGAC
ACGGCGACGTCGCTCAACAACCTCGCTATGTTTCACAAAGCGCAGGGCAA
CTTTGCGGAGGCTGCGCCCTTGTACGCGCGCGCGCTCGCCATCAGCGAGG
AGGCGCTGGGCCCGAAGCATCCCGACACGGCGACGTTGCTCAACAACCTC
GCTAACTTACATCAAGCGCAGGGCAATTTTGCGGAAGCGGCGCCATTGTT
CGAGCGCGCGCTCGCCATTCGCGAGGAGGTGCTGGGCCCGAAGCATCCCT
CGACGGCGACGTCGCTCAACAATCTCGCCATGCTCATCGAAGCTCAAGGC
GAGTTGGCAAAAGCAGCGCCGTTGTACGAGCGCGCTCTTGCCATTTGCGA
CGAGGTGCTGGGCCCCAAGCATCCTTGGACGGCGACGTCGCTCAACAACC
TCGCCATGCTCATCGAAGCTCAAGGCGAGTTGGCAAAAGCGGCGCCGTTG
TACGAGCGCGCGCTCGCCATTCGCGAAGAGGTGCTGGGCCCGAAGCATCC
AGACACGGCGACGTCGCTGTACAATCTTGCCGACCTTCTCGAAAAGCAGG
GCAATATTGACGAAGCGGCTTTATTGTACAAGCGTTCACTTGCCATCCAG
CAGGAAGTGTTGGGTCCCGAGCATCCCTCGACTGTCCAAACGCAGCAAGC
GCTCGATGAGCTCATCGCACCAGAACACGGCAATTGTACTATGCAGTGA

protein sequence of jgi.p|Trimin1|173796

>Trimin1|173796|e_gw1.106.47.1 ID=Trimin1|173796|e_gw1.106.47.1|Name=jgi.p|Trimin1|173796|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=883bp
MQRRALAIEEKAYGSEHVKVAISLGNLGIVLFEIGDLQGAEGMQRRALAI
EEKAYGTEHVEVAKTLGNLGLVLQAQGDLKSAEGMQRRALAITEKVYGTE
HVNTWATSLHNLAYELHDRQMLMEAAPLYHRALAIREEALGPKHPLTATS
LDNLAGLLEAQGDLAEAAPLYVRALAIREEVLGPKHPDTATSLNNLATLH
QAQGNFAEAAPLYARALAILEEALGPKHPSTATSLNNLAGLLRAQGNFAE
AAPLYVRALAISEEALGPKHPSTAKSCGNLAALLQAQGNCAEAAPLYVRA
LAITEEALGPKHPDTATSLNNLAMFHEAQGNFAEAAPLYARALAIEEEVL
GPKHPSTTTSLNNLAVLIAAQGDLAKAAPLYVRALAVREEALGPKHPLTA
TSLDNLAGLLEAQGDLAEAAPLYVRALAIREEVLGPKHPDTATSLNNLAT
LHQAQGNFAEAAHLYVRALAIREEALGPKHPDTATSLNNLAVFHKAQGNF
AEAAPLYVRALAITEEALGPKHPDTATSLNNLATLHQAQGNFAKAAHLYV
RALAISEEALGPKHPSTATSLNNLASLHQAQGNFAEAAPLYTRALAIREE
ALGPKHPDTATSLNNLASLHEAQGNFAEAAPLYVRALAIREEALGPKHPD
TATSLNNLAMFHKAQGNFAEAAPLYARALAISEEALGPKHPDTATLLNNL
ANLHQAQGNFAEAAPLFERALAIREEVLGPKHPSTATSLNNLAMLIEAQG
ELAKAAPLYERALAICDEVLGPKHPWTATSLNNLAMLIEAQGELAKAAPL
YERALAIREEVLGPKHPDTATSLYNLADLLEKQGNIDEAALLYKRSLAIQ
QEVLGPEHPSTVQTQQALDELIAPEHGNCTMQ*

mRNA from alignment at Contig_106:115714..122766-

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_9496 ID=mRNA_9496|Name=jgi.p|Trimin1|173796|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=7053bp|location=Sequence derived from alignment at Contig_106:115714..122766- (Tribonema minus UTEX_B_3156 )
ATGCAGCGGCGCGCGCTCGCCATCGAGGAGAAGGCGTACGGCAGTGAGCA
CGTGAAGGTCGCAATTAGTCTCGGCAATCTCGGCATTGTGCTCTTCGAAA
TAGGCGATTTGCAAGGTGCGGAGGGGATGCAGCGGCGCGCGCTCGCCATC
GAGGAGAAGGCGTACGGCACTGAGCACGTGGAGGTCGCGAAGACTCTCGG
CAATCTCGGCCTTGTGCTCCAAGCACAAGGCGATTTGAAGAGTGCAGAGG
GGATGCAGCGGCGCGCGCTCGCCATCACGGAGAAGGTGTACGGCACTGAG
CATGTGAACGTCGCGAAGACTCTCGGCAATCTCGGCAATGTGCTCGAAGC
ACAAGGCGATTTGCAATGTGCGGAGGGGATGCAGCGGCGCGCGTACGCAA
TCTTCAAGAACAAATTAGGCGACGAGCATCCTTTGACAAGACAGGCACAG
CAGATCCTTGCTATGGTGGACGAAGCGGCCTCAGAGTAGTCGCAAGCGCC
AAAGTTTCAGGTTTAATCGATCTCATACATCTTCACTCATTGCTGCGCGC
TTAATGGTGTGTGACGCTCGCAGTGCACTGCATCTCGCACTGCTGAATAT
GCCGTCGTCCGTCACCAACCATGTACGCTTCTGCAAGCATCGTCGCCGCC
ATGCGCAATTGCTTCATCAATCGAGCACACTTCTGCGAGCGGCGTCGCCG
CTGTGTGCGATGGCATCATCGCGTGCACCGCTCCATGCACTGCATCCCGC
TGCGTTCATCATTGAAATATTCAACAAAGATTTTTACCACAGCCGGCGCG
ATGGACATTCCTCATCGAACACGTCTAGTGCGCCATTGTGAGCATCGTCG
CCGTGCTCGCATCGTCACTGTTCACATTCATGAAACTGTCGTGCGCTATC
GTCGATCGCATGCGATGAGTGCAATTGTGTGTGAAACTGCATGTGCTTCA
TCTCGTTTGTGCATCTTGATTGCATTGTGAGCGTTGTCTCGTTCATACAT
CTTAATCGCACTATGTGCATCATCTCGTGTGCGCATCTTGATTGCATCGT
GTGTAGTGTCTCGTGTATGCATAGTGAATCATCGTGTGCATTGCAAGCTT
TGTTAAGGGTTGCCATATAGCTTGTTGCATGTTACAACGGCTCGTTAGGA
TGTCGCTGATTGTGGACATCGCGCCGCTCTCCGCACCACTTTTGTGTGTC
GTGAATGCGATTGCGTGCTGCGGTGCTCGACCAGCCTGCGGCTGGGCCTC
CCCCATGGGGGAGTCGACTGCCGACCAGCCTTCGGCTGGGCCCGACTCCC
CTTTGGGGAGGCCCGAGCGAAGCTCGGTCGGCCTGTGGCCGGTCGAAGGG
CAGGCCTGACCGAAGGTCGGTCTGAAGTTTTCCCAAAGAGTGTTGCGCGC
GCGATGACACAGATTCCTCGCCCTTCGATTTCAGTCTCGTTCAACGGCAA
TAGCGGTGTGCCTTGATGTCAATGATGCGTGAAGAACACAGTCATGAGAG
GTGCGCTCGAGGGCACGTTTGCGCACATCCTTCGCTTCTCGCCCTTCGGG
CAGTCGAACACCGAGCACATGCCATGAATTGTGCGCCATTTTGAGCTACG
CATGTTGTGTGTCGCAGAGCACACCTACGCGCCGTGCTGACTTTTTATAT
TATGTGTAGGTCCACAACCCCTTGGCCTGATCAGCTCACTTGTGATTGGC
AAAATATGCTGGTGTAATGAAACGTCACTGTCTACAGTCCATTCCAGTGC
AAGTCCTCCCCTTCTCCAAAGTCCTCCCCGACAAAATCCCCATACCCCCC
TGCCTGCCGTGTCGCAGCCATATGCTGACTCATCAATCAACAGTCAAAAG
AGGTTGCGACGAGGCCGCAGCAGCAAGTGCGCAGCAATGTGCTGAGCACA
TGTACGGAAATTCCCTGTTGCAGTTGCAGTTATTTCCGAGCGCATTTTCT
GGCCACTATCCACAGCAGCAGCTACGTAGAAGGTGTGCATCAGTCAGTGC
AGGAACAGCATCAGCAGCGCAGCGCATCAGGGAGGCAGCTCACTCATGGC
ATCTCCGGCGCCAAAAGCTCCAGGTACGCAAACTACAGCACTTCATACAT
GCACAAATTTCCAGGTTCATCAATGCGGTGTGATGCAACGCAATGGAGAC
ATGTGAGTACATAGAACGAGTTTGAAAACGCTCCATGCACCCCAGCTTTC
ACTGTGATCATGCTTCAAGCAAGGCTTTCTGCGCTCCAGGCTCATGATGC
TATCACTGTCAATCTGCAGGTGATATGTACAATGCACAGAGGCAGGAGCG
CGAAGGCCCCGTGGTTTTCATCAGTCACGCAGGTCCGCAGAAGAAGGATT
TCGCCGACATTGTGTACCAATGGCTGATCAGCAAAGGTGTGGAGAAGGAC
CTCCTCTTCTTGGACGAACACTCTCTGGAGCCTGGTGAGGAATTGAACTC
AGACATTAAAAGGGCACTGGAGACGGCCAAGATAGGTGAGTCTGCGATGC
ATCCTTGCTTGCCATGTTGAAGTGACTCCAACAGCCGTGACGGTCCGTGA
ATTGTCTGTGTGTACTGCAGGCATTTTTGTGCTCAGTGGAGACTTCGTGA
CGAGGAAGTGGCCGATGCAGGAGTTGCGCCGACTGCTGGAGCGCTGCGAC
TCCGGACACAAGGTCAAGCTCCTTCCGGTGTTCTTCAAGCTGAACCCGAC
ACAGTGCACGGACGGGCTGCAGCAACTGTACACGGACTGCAACTGGGGCG
ATCGCGGGCGGCCGGCTGATGCCGTAATTGCGGGCTGGATCACAGACATA
AGGAAATTGTGCGGGCGCTCAGGATGGCGACTGGATCAGGTGCGGTTATC
CTTTGAGCATTGAGATGACGCACGTGGCGTCGCCTCACATTTGTTTCATG
CTCCCTTTGCTTGCAGTCGCGCGGCTTCGAGGGGAAGTGTGCGGCAGATG
TGGCGATGGCGATCTTTGAGGAGCTAAAGCGGCAAGGACTCGCGGCTGAT
CGAGATGAACTTCCGCCGGCGAGATTCTTGAAGCGTGTCATCACCAACAG
CGACGATTTGCTGGGCCGCGACGAACTGATCATCAACATCAAGAAGGCGC
TTGAGCAGAAACGTGCCGTGTTTCTTTTCGGGGGCCCTGGGGAGGGCAAG
ACCTCAGTGGCAATGGAGGCAGCTGTGCAGCTTGAACAAGTGTTTGGCGG
AGGATCATTTATGGTGGACATGAAAGGCGAGTACGACATTGTGTCTGCAT
CGAGGTACTGGGTTGCGAGTCATGGCCTGCTGGTCCACTAATCTTCCCTT
CGTGCTGTATCACCGCAGGTTTCCACATCGATGATCGTTTATCCGCGGCG
GATGCTGTCAGGAAGCATGTTGCTACGGCCATGTACCAGCAACTTCTTCA
GTGCAAGGTAAGACAAGAGTTTGCCGCAACGTATGCTCTCTTGTTGTTGC
ATCACACCTGATGGACATCACCCTAATGTGCATTTTGCAGGATGGTGTAC
GGGCAGGCAATGTGCGGCCGGCGTGGAAAGACCAGTGGCATGCCGTTTTG
ACCTGGGTCAGGCGGCTGCCAAGCACAAATAAGGTGCTGGTGGCATTTGA
TACGGCAGAGGACGTCAATCCGGCGGGCGCAGGACATGTGAGTGCAATTT
ATACCTTGACATACAGCTTGCTCACACTCTTGCTTGCTCACATGCTGACA
CAGTGTATCTCTCATTTCCAGGAGTTGTTCCTGTGCATGGAGGAGCTGCG
TCGACATGAGGCCATGTCCATCATAGTCATGTCCAGGGAGAATCTCGATC
GCTTCAAGAGCTACAAAAGGCTGGAAGTCCAGCCGCTCGGCGATGAATGC
TCTCGGACTCTGCTTTGCGGCGGCATCGAGGTGGCAAAGGACAGCTTCGA
AGCTCAGACCTTGGCGAGGTACTGCGGCCACAATGCCCTCATGCTGACGG
CGCTAGCAGCCTTTCTGGAAAGGCGGCCTGAGAAGCTTAAGGTACACGAC
AAAATCATATGCATCTGTTACTGCATGGCTTCACAAATTATACCAGTAGA
TTCTGCTTGACGCTGATGTCCTGCTTGTGCTGCCTTGCGGCTAGTCATCA
GCGCTGCAAAGTATCGTGCCAGAGCAATCACTTGACGTGGACTTCACCCT
TGTGCTTTCTGCAGCAAGTCGTCAGTGCCGCGGAACTGTGCGCCAGCTTG
CCAGCGGACAGGAAGTCGGAGTACGACTCCAACGTGCAGCAGCTCTATGC
CTGGCTCCCCCAGTTTCTGGACAAGCCCAGCCTGGACAGCCTGGCGCAAC
TCTCCGTTTTTCCTGACAGCTTCAGTGATGCTGGCATCAGTGCCATGCTC
ACACCTGAGAGCGAGTACTCGGACGCGCCGTATTCCGACAGCGACTTCGA
AGACTTGCTGGGCGAACTCCGCGATCTCTCCATCCTTCAACGCCTTCCGG
ATCCGCCGGTCGAAGTCCCCGGCGGCGCGCGGTACACGATGCACGCCATG
CACCGGGAGGCGGCGAAGCGGTTGCTTTCGCCAGAGGCGGCATCGGTCGC
TCAGCGGAGATTCGCATACTTCGTCGTCAGCTTGGCGGACGAGCTTCGCG
AACGTCGTCCGGAGAAGGGAGCAGACGTGCTTGCGCCAGTGTTGGCACTG
CTGTTGAGCGAGCAGCAGAACTTACGGAAGTTGGCGACATTGCTCAACAT
TGACAACACGGAGACCTGGGCCACAAGCCTTCATAACCTTGCTTACGAGT
TGCATGACAGACAAATGCTGATGGAGGCGGCGCCCTTGTACCACCGCGCG
CTTGCCATTCGGGAAGAGGCGCTGGGCCCGAAGCATCCTTTGACAGCGAC
GTCGCTCGACAACCTCGCGGGCCTCCTCGAAGCTCAAGGCGACTTGGCGG
AAGCGGCGCCGTTGTACGTGCGCGCGCTCGCCATTCGCGAGGAGGTGCTG
GGCCCGAAGCATCCCGACACGGCGACGTCGCTCAACAACCTCGCCACCTT
ACATCAAGCGCAGGGCAACTTTGCGGAGGCGGCGCCCTTGTACGCACGCG
CGCTCGCCATCCTCGAGGAGGCGCTGGGCCCGAAGCATCCCTCGACGGCG
ACGTCGCTCAACAACCTCGCCGGCCTCCTCCGAGCGCAGGGCAACTTTGC
GGAGGCGGCGCCCTTGTACGTGCGCGCGCTCGCCATCAGCGAGGAGGCAC
TGGGCCCCAAGCATCCTTCGACGGCGAAGTCGTGCGGTAACCTTGCCGCC
CTCCTCCAAGCGCAGGGCAACTGTGCGGAGGCGGCGCCCTTGTACGTGCG
CGCGCTCGCCATCACGGAGGAGGCGCTGGGCCCGAAGCATCCAGACACGG
CGACGTCGCTCAACAACCTCGCTATGTTTCACGAAGCGCAGGGCAACTTT
GCGGAGGCTGCGCCCTTGTACGCGCGCGCGCTCGCTATCGAAGAGGAGGT
GCTGGGCCCGAAGCATCCTTCAACGACGACGTCACTCAACAACCTCGCTG
TGCTCATCGCAGCTCAAGGCGACTTGGCAAAAGCGGCACCCTTGTACGTG
CGCGCGCTCGCCGTCAGGGAGGAGGCGCTGGGCCCGAAGCATCCTTTGAC
AGCGACGTCGCTCGACAACCTCGCGGGCCTCCTCGAAGCTCAAGGCGACT
TGGCGGAAGCGGCGCCGTTGTACGTGCGCGCGCTCGCCATTCGCGAGGAG
GTGCTGGGCCCGAAGCATCCCGACACGGCGACGTCGCTCAACAACCTCGC
CACCTTACATCAAGCGCAGGGCAACTTTGCTGAGGCGGCGCACTTGTACG
TGCGTGCGCTCGCCATCAGGGAGGAGGCGCTGGGCCCGAAGCATCCAGAC
ACGGCGACGTCGCTCAACAACCTCGCTGTGTTTCATAAAGCGCAGGGCAA
CTTTGCGGAGGCGGCGCCCTTGTACGTGCGCGCGCTCGCCATCACGGAGG
AGGCGCTGGGCCCGAAGCATCCCGACACGGCGACGTCGCTCAACAACCTC
GCCACCTTACATCAAGCGCAGGGCAACTTTGCGAAAGCGGCGCACTTGTA
CGTGCGTGCGCTCGCCATCAGTGAGGAGGCGCTGGGCCCGAAGCATCCTT
CGACGGCGACGTCGCTCAACAACCTCGCTTCATTACATCAAGCGCAGGGC
AACTTTGCGGAGGCTGCGCCCTTGTACACGCGCGCGCTCGCCATCAGGGA
GGAGGCGTTGGGCCCGAAGCATCCAGACACGGCGACGTCGCTCAACAACC
TCGCTTCGTTACATGAAGCGCAGGGCAACTTTGCGGAGGCGGCTCCCTTG
TACGTGCGCGCGCTCGCCATCAGGGAGGAGGCACTGGGCCCGAAGCATCC
CGACACGGCGACGTCGCTCAACAACCTCGCTATGTTTCACAAAGCGCAGG
GCAACTTTGCGGAGGCTGCGCCCTTGTACGCGCGCGCGCTCGCCATCAGC
GAGGAGGCGCTGGGCCCGAAGCATCCCGACACGGCGACGTTGCTCAACAA
CCTCGCTAACTTACATCAAGCGCAGGGCAATTTTGCGGAAGCGGCGCCAT
TGTTCGAGCGCGCGCTCGCCATTCGCGAGGAGGTGCTGGGCCCGAAGCAT
CCCTCGACGGCGACGTCGCTCAACAATCTCGCCATGCTCATCGAAGCTCA
AGGCGAGTTGGCAAAAGCAGCGCCGTTGTACGAGCGCGCTCTTGCCATTT
GCGACGAGGTGCTGGGCCCCAAGCATCCTTGGACGGCGACGTCGCTCAAC
AACCTCGCCATGCTCATCGAAGCTCAAGGCGAGTTGGCAAAAGCGGCGCC
GTTGTACGAGCGCGCGCTCGCCATTCGCGAAGAGGTGCTGGGCCCGAAGC
ATCCAGACACGGCGACGTCGCTGTACAATCTTGCCGACCTTCTCGAAAAG
CAGGGCAATATTGACGAAGCGGCTTTATTGTACAAGCGTTCACTTGCCAT
CCAGCAGGAAGTGTTGGGTCCCGAGCATCCCTCGACTGTCCAAACGCAGC
AAGCGCTCGATGAGCTCATCGCACCAGAACACGGCAATTGTACTATGCAG
TGA

Coding sequence (CDS) from alignment at Contig_106:115714..122766-

>mRNA_9496 ID=mRNA_9496|Name=jgi.p|Trimin1|173796|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=2649bp|location=Sequence derived from alignment at Contig_106:115714..122766- (Tribonema minus UTEX_B_3156 )
ATGCAGCGGCGCGCGCTCGCCATCGAGGAGAAGGCGTACGGCAGTGAGCA
CGTGAAGGTCGCAATTAGTCTCGGCAATCTCGGCATTGTGCTCTTCGAAA
TAGGCGATTTGCAAGGTGCGGAGGGGATGCAGCGGCGCGCGCTCGCCATC
GAGGAGAAGGCGTACGGCACTGAGCACGTGGAGGTCGCGAAGACTCTCGG
CAATCTCGGCCTTGTGCTCCAAGCACAAGGCGATTTGAAGAGTGCAGAGG
GGATGCAGCGGCGCGCGCTCGCCATCACGGAGAAGGTGTACGGCACTGAG
CATGTGAACACCTGGGCCACAAGCCTTCATAACCTTGCTTACGAGTTGCA
TGACAGACAAATGCTGATGGAGGCGGCGCCCTTGTACCACCGCGCGCTTG
CCATTCGGGAAGAGGCGCTGGGCCCGAAGCATCCTTTGACAGCGACGTCG
CTCGACAACCTCGCGGGCCTCCTCGAAGCTCAAGGCGACTTGGCGGAAGC
GGCGCCGTTGTACGTGCGCGCGCTCGCCATTCGCGAGGAGGTGCTGGGCC
CGAAGCATCCCGACACGGCGACGTCGCTCAACAACCTCGCCACCTTACAT
CAAGCGCAGGGCAACTTTGCGGAGGCGGCGCCCTTGTACGCACGCGCGCT
CGCCATCCTCGAGGAGGCGCTGGGCCCGAAGCATCCCTCGACGGCGACGT
CGCTCAACAACCTCGCCGGCCTCCTCCGAGCGCAGGGCAACTTTGCGGAG
GCGGCGCCCTTGTACGTGCGCGCGCTCGCCATCAGCGAGGAGGCACTGGG
CCCCAAGCATCCTTCGACGGCGAAGTCGTGCGGTAACCTTGCCGCCCTCC
TCCAAGCGCAGGGCAACTGTGCGGAGGCGGCGCCCTTGTACGTGCGCGCG
CTCGCCATCACGGAGGAGGCGCTGGGCCCGAAGCATCCAGACACGGCGAC
GTCGCTCAACAACCTCGCTATGTTTCACGAAGCGCAGGGCAACTTTGCGG
AGGCTGCGCCCTTGTACGCGCGCGCGCTCGCTATCGAAGAGGAGGTGCTG
GGCCCGAAGCATCCTTCAACGACGACGTCACTCAACAACCTCGCTGTGCT
CATCGCAGCTCAAGGCGACTTGGCAAAAGCGGCACCCTTGTACGTGCGCG
CGCTCGCCGTCAGGGAGGAGGCGCTGGGCCCGAAGCATCCTTTGACAGCG
ACGTCGCTCGACAACCTCGCGGGCCTCCTCGAAGCTCAAGGCGACTTGGC
GGAAGCGGCGCCGTTGTACGTGCGCGCGCTCGCCATTCGCGAGGAGGTGC
TGGGCCCGAAGCATCCCGACACGGCGACGTCGCTCAACAACCTCGCCACC
TTACATCAAGCGCAGGGCAACTTTGCTGAGGCGGCGCACTTGTACGTGCG
TGCGCTCGCCATCAGGGAGGAGGCGCTGGGCCCGAAGCATCCAGACACGG
CGACGTCGCTCAACAACCTCGCTGTGTTTCATAAAGCGCAGGGCAACTTT
GCGGAGGCGGCGCCCTTGTACGTGCGCGCGCTCGCCATCACGGAGGAGGC
GCTGGGCCCGAAGCATCCCGACACGGCGACGTCGCTCAACAACCTCGCCA
CCTTACATCAAGCGCAGGGCAACTTTGCGAAAGCGGCGCACTTGTACGTG
CGTGCGCTCGCCATCAGTGAGGAGGCGCTGGGCCCGAAGCATCCTTCGAC
GGCGACGTCGCTCAACAACCTCGCTTCATTACATCAAGCGCAGGGCAACT
TTGCGGAGGCTGCGCCCTTGTACACGCGCGCGCTCGCCATCAGGGAGGAG
GCGTTGGGCCCGAAGCATCCAGACACGGCGACGTCGCTCAACAACCTCGC
TTCGTTACATGAAGCGCAGGGCAACTTTGCGGAGGCGGCTCCCTTGTACG
TGCGCGCGCTCGCCATCAGGGAGGAGGCACTGGGCCCGAAGCATCCCGAC
ACGGCGACGTCGCTCAACAACCTCGCTATGTTTCACAAAGCGCAGGGCAA
CTTTGCGGAGGCTGCGCCCTTGTACGCGCGCGCGCTCGCCATCAGCGAGG
AGGCGCTGGGCCCGAAGCATCCCGACACGGCGACGTTGCTCAACAACCTC
GCTAACTTACATCAAGCGCAGGGCAATTTTGCGGAAGCGGCGCCATTGTT
CGAGCGCGCGCTCGCCATTCGCGAGGAGGTGCTGGGCCCGAAGCATCCCT
CGACGGCGACGTCGCTCAACAATCTCGCCATGCTCATCGAAGCTCAAGGC
GAGTTGGCAAAAGCAGCGCCGTTGTACGAGCGCGCTCTTGCCATTTGCGA
CGAGGTGCTGGGCCCCAAGCATCCTTGGACGGCGACGTCGCTCAACAACC
TCGCCATGCTCATCGAAGCTCAAGGCGAGTTGGCAAAAGCGGCGCCGTTG
TACGAGCGCGCGCTCGCCATTCGCGAAGAGGTGCTGGGCCCGAAGCATCC
AGACACGGCGACGTCGCTGTACAATCTTGCCGACCTTCTCGAAAAGCAGG
GCAATATTGACGAAGCGGCTTTATTGTACAAGCGTTCACTTGCCATCCAG
CAGGAAGTGTTGGGTCCCGAGCATCCCTCGACTGTCCAAACGCAGCAAGC
GCTCGATGAGCTCATCGCACCAGAACACGGCAATTGTACTATGCAGTGA