mRNA_9465 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|173755
Unique NamemRNA_9465
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|173755 vs. uniprot
Match: A0A835YWW8_9STRA (Histidine kinase-like ATPase n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWW8_9STRA)

HSP 1 Score: 745 bits (1924), Expect = 2.970e-269
Identity = 390/413 (94.43%), Postives = 399/413 (96.61%), Query Frame = 1
Query:    1 MGVRGTELIARKKDGSEMHVEVSLSPLSVGGDMHTIAIVRDVTEQLQLREAQEVALASTLAKSSFLAAMSHEIRTPLHGVVGWVDILDNMAVEEEQRACLKGLKQCADSLMHIVNDVLDMSKISAGKMVLQKHNIDVHDFAHDIHATMAVIAERKGLSLTTTTSSLSSSLAVATDAPRLRQVIVNLVINAIKYTKRGGVNVVYTMQGSSELHIVVSDTGTGIVDSKMAVLFEPFELSTGTGLGLSICKSLVSLLQGTLSCVTEVGAGSTFTVTVPVQITELPLSAKHAVAPAGFVDKVVLVVDDSKVNRSIAQHMLKLLGVKTEIATDGLEAVQYFVDGHTASLTLMDLIMPLLGGCAATKQLREMGVTIPIVAVSASAFVHDVEECLASGMNDHLSKPFTSQQLQDMLHKWM 1239
            MGVRGTELIARKKDGSEMHVEVSLSPLSVGG MHTIAIVRDVTEQLQLREAQEVALASTLAKSSFLAAMSHEIRTPLHGVVGWVDILDNM VEE+ RACLKGLKQCADSLMHIVNDVLDMSKISAGKMVLQKH+IDVHDFAHDIHATMAVIAERKGLSLTTTTSSL SSLAVATDAPRLRQVIVNLVINAIKYTKRGGVNVVYTMQGSSELHIVVSDTGTGIVDSKMAVLFEPFELSTGTGLGLSICKSLV LLQGTLSC+TEVG GSTFTVTVPVQITEL +S K AVA AGF DK+VLVVDDSKVNRSIAQHMLK++GV+TEIA DGLEA+QYF DGHTASLTLMDLIMPLLGGCAATKQLREMGVT PIVAVSASAFVHDVEECLASGMNDHLSKPFTSQQLQDMLHKWM
Sbjct:   78 MGVRGTELIARKKDGSEMHVEVSLSPLSVGGYMHTIAIVRDVTEQLQLREAQEVALASTLAKSSFLAAMSHEIRTPLHGVVGWVDILDNMVVEEKHRACLKGLKQCADSLMHIVNDVLDMSKISAGKMVLQKHDIDVHDFAHDIHATMAVIAERKGLSLTTTTSSLMSSLAVATDAPRLRQVIVNLVINAIKYTKRGGVNVVYTMQGSSELHIVVSDTGTGIVDSKMAVLFEPFELSTGTGLGLSICKSLVGLLQGTLSCLTEVGRGSTFTVTVPVQITELAVSPKRAVAHAGFGDKIVLVVDDSKVNRSIAQHMLKIMGVQTEIAIDGLEAIQYFADGHTASLTLMDLIMPLLGGCAATKQLREMGVTTPIVAVSASAFVHDVEECLASGMNDHLSKPFTSQQLQDMLHKWM 490          
BLAST of jgi.p|Trimin1|173755 vs. uniprot
Match: A0A835ZDZ2_9STRA (Histidine kinase-like ATPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDZ2_9STRA)

HSP 1 Score: 556 bits (1434), Expect = 1.210e-194
Identity = 291/419 (69.45%), Postives = 345/419 (82.34%), Query Frame = 1
Query:    1 MGVRGTELIARKKDGSEMHVEVSLSPLSVGGDMHTIAIVRDVTEQ----LQLREAQEVALASTLAKSSFLAAMSHEIRTPLHGVVGWVDILDNMAVEEEQRACLKGLKQCADSLMHIVNDVLDMSKISAGKMVLQKHNIDVHDFAHDIHATMAVIAERKGLSLTTTTSSLSSSLAVATDAPRLRQVIVNLVINAIKYTKRGGVNVVYTMQGSSELHIVVSDTGTGIVDSKMAVLFEPFELSTGTGLGLSICKSLVSLLQGTLSCVTEVGAGSTFTVTVPVQITE--LPLSAKHAVAPAGFVDKVVLVVDDSKVNRSIAQHMLKLLGVKTEIATDGLEAVQYFVDGHTASLTLMDLIMPLLGGCAATKQLREMGVTIPIVAVSASAFVHDVEECLASGMNDHLSKPFTSQQLQDMLHKWM 1239
            MG RGT+LIA+ KDGSE+HVEVSLSPL VG  MHTIAIVRDVT+Q    +QL+EAQ+ ALA+++AKS+FL+AMSHEIRTPLHGV+GW DILDNMA+E+EQ ACLKGLK+CADSLMHIVNDVLD+SKISAGKM+LQ   ID+H+ A DIH+TMAV+A  K LSLTT T SL+S   VA DAPRL+QVIVNLV N+IKYT +GGV + YT+   S+L +VV DTGTGI   KM+VLFEPFELSTGTGLGLSICKSLV+L++GTL+C TE G G+TFTV+VPV+     +P S     AP  F D+ VL+VDDS +NRSI QHMLK L V TE AT+GLEA+QYFVDGH AS+ LMD+ MP LGGCAAT +LREMG+ IPIVAVSASA   +VEECLASGM+DHLSKPF+++ L DML KW+
Sbjct:   77 MGKRGTDLIAQCKDGSEIHVEVSLSPLCVGDVMHTIAIVRDVTKQKMFEMQLQEAQKTALAASVAKSTFLSAMSHEIRTPLHGVIGWADILDNMALEKEQSACLKGLKRCADSLMHIVNDVLDLSKISAGKMMLQNQAIDIHELAQDIHSTMAVMAAEKSLSLTTVTKSLTSPFMVAIDAPRLQQVIVNLVNNSIKYTLKGGVVITYTVHEGSQLVVVVKDTGTGITADKMSVLFEPFELSTGTGLGLSICKSLVNLMRGTLACATEAGMGTTFTVSVPVESAAAVVPPSPPLVAAPTAFHDETVLIVDDSTINRSIMQHMLKPLAVHTEEATNGLEAIQYFVDGHEASIILMDVHMPQLGGCAATLRLREMGIAIPIVAVSASALAQEVEECLASGMSDHLSKPFSTKLLSDMLRKWI 495          
BLAST of jgi.p|Trimin1|173755 vs. uniprot
Match: A0A835YY89_9STRA (Uncharacterized protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835YY89_9STRA)

HSP 1 Score: 321 bits (823), Expect = 9.400e-101
Identity = 189/421 (44.89%), Postives = 261/421 (62.00%), Query Frame = 1
Query:   13 GTELIARKKDGSEMHVEVSLSPLSVGGDMHTIAIVRDVTEQLQ----LREAQEVALASTLAKSSFLAAMSHEIRTPLHGVVGWVDILDNMAVEEEQRACLKGLKQCADSLMHIVNDVLDMSKISAGKMVLQKHNIDVHDFAHDIHATMAVIAERKGLSLTTTTSSLSSSLAVATDAPRLRQVIVNLVINAIKYTKRGGVNVVYTMQGSSELHIVVSDTGTGIVDSKMAVLFEPFELST--------GTGLGLSICKSLVSLLQGTLSCVTEVGAGSTFTVTVPVQITELPLSAKHAVAPAGFVDKVVLVVDDSKVNRSIAQHMLKLLGVKTEIATDGLEAVQYFVDGHTASLTLMDLIMPLLGGCAATKQLREMGVTIPIVAVSASAFVHDVEECLASGMNDHLSKPFTSQQLQDMLHKWM 1239
            G  LI + KDG  M V+VSLSP+ +    HTIAIVRDVT Q Q    L +A+E A+A++ AKS+F+A MSHEIRTP+HGV+GW DIL    V+EEQ+ CL  L+Q A SLM I+ND+LD+SK+ +GK  L+    D+HD  + +H    V+A  K + +      L +   +  D  RLRQVI+NLV NA+K+T+RG V + Y ++    L I V DTG GI ++   ++F+ F            GTGLGL+I + LV L+ G+LS  +    GS F   +P+   EL +  K     A  +   VL+VDD+++N +IA  M   LG+K   A DGLEA+ +F DG    + LMD+ MP L G  AT+QLR+ G+T+PI+A+SASA   DV+  + SGMNDHLSKPF    L+ ML +W+
Sbjct:  199 GMPLIGQHKDGRIMDVDVSLSPVKIDLMTHTIAIVRDVTMQKQYEQELLKAREEAVAASNAKSAFVANMSHEIRTPMHGVIGWADILSEKLVDEEQKQCLSNLQQSASSLMTIINDILDVSKMDSGKFELKVEPFDLHDLINTVHNIATVLARGKPVEVCKEVD-LPTPFVIMGDFERLRQVILNLVSNAVKFTERGSVQITYEVEAPG-LVITVEDTGIGIAETDSELIFQVFTQLDHSNDRKYGGTGLGLAIARKLVELMNGSLSYKSTPLTGSAFRCCIPLSRGELVV--KRPELHAAKLRGSVLLVDDNRINLAIASKMAISLGLKVHTAGDGLEAIAFFKDGEKVDVVLMDIQMPNLDGLQATRQLRQAGLTVPIIAISASALDADVQNSVNSGMNDHLSKPFDMLALKAMLLRWL 615          
BLAST of jgi.p|Trimin1|173755 vs. uniprot
Match: A0A7V5VK59_9BACT (Response regulator n=1 Tax=Armatimonadetes bacterium TaxID=2033014 RepID=A0A7V5VK59_9BACT)

HSP 1 Score: 241 bits (615), Expect = 1.600e-72
Identity = 148/371 (39.89%), Postives = 220/371 (59.30%), Query Frame = 1
Query:  169 ASTLAKSSFLAAMSHEIRTPLHGVVGWVDILDNMAVEEEQRACLKGLKQCADSLMHIVNDVLDMSKISAGKMVLQKHNIDVHDFAHDIHATMAVIAERKGLSLTTTTSSLSSSLAVATDAPRLRQVIVNLVINAIKYTKRGGVNVVYTMQGS--SELHIVVSDTGTGIVDSKMAVLFEPF---ELST-----GTGLGLSICKSLVSLLQGTLSCVTEVGAGSTFTVTVPVQITELPLSAKHAVAPAG----FVDKVVLVVDDSKVNRSIAQHMLKLLGVKTEIATDGLEAVQYFVDGHTASLTLMDLIMPLLGGCAATKQLREMGVTIPIVAVSASAFVHDVEECLASGMNDHLSKPFTSQQLQDMLHKWM 1239
            A++ AKS FLA MSHEIRTP++GV+G V +L++  +  EQ+  L+ LK  A  L+ ++ND+LD+SKI AGKM L++  +++H+ A +  A     A  KGL L T     +    +  D  RLRQ++ N + NAIK+T  G V ++     +    + + V DTG GI + K   LFE F   + ST     GTGLGL+ICK L  ++ G +   +E G GS F V +P+  T+ P +   +  P      F  + +L+V+D++VNR +A  +L  L ++ +IA +GLEAV+   D +   L LMD  MP + G  AT+ LRE GV  PI+A++A+A   D E+CLA GMND+LSKP  + +L+  L  W+
Sbjct:    4 AASRAKSEFLANMSHEIRTPMNGVLGMVQLLEDTPLTPEQQDLLRTLKNSAHYLLGLLNDILDLSKIEAGKMTLERIPVNLHELAQEAVALFGGRASEKGLVLETRIEPNAPEWVLG-DPVRLRQIVANFISNAIKFTHEGSVTLILLPSPTYPQGVWMGVQDTGIGIPEEKQTSLFEAFTQADSSTTRKYGGTGLGLTICKRLAEMMGGRIGVESEEGVGSLFYVDLPLPATQPPQTQSDSTQPESLPEAFPGRRILLVEDNEVNRKVATRLLSKLQLEVDIAVNGLEAVEKATDNNY-DLILMDCQMPEMDGYEATRVLRERGVQTPIIALTANALEGDREKCLACGMNDYLSKPIQADKLRATLAHWL 372          
BLAST of jgi.p|Trimin1|173755 vs. uniprot
Match: A0A7V5ZG42_9BACT (Response regulator n=1 Tax=Armatimonadetes bacterium TaxID=2033014 RepID=A0A7V5ZG42_9BACT)

HSP 1 Score: 250 bits (638), Expect = 4.660e-72
Identity = 167/431 (38.75%), Postives = 252/431 (58.47%), Query Frame = 1
Query:   40 DGSEMHVEVSLSPLSVGGDMHTIAIVRDVTE--------QLQLREAQEVAL---ASTLAKSSFLAAMSHEIRTPLHGVVGWVDILDNMAVEEEQRACLKGLKQCADSLMHIVNDVLDMSKISAGKMVLQKHNIDVHDFAHDIHATMAVIAERKGLSLTTTTSSLSSSLAVATDAP--------RLRQVIVNLVINAIKYTKRGGVNVVYTMQGS--SELHIVVSDTGTGIVDSKMAVLFEPF---ELST-----GTGLGLSICKSLVSLLQGTLSCVTEVGAGSTFTVTVPVQITELP--LSAKHAVA-PAGFVDKVVLVVDDSKVNRSIAQHMLKLLGVKTEIATDGLEAVQYFVDGHTASLTLMDLIMPLLGGCAATKQLREMGVTIPIVAVSASAFVHDVEECLASGMNDHLSKPFTSQQLQDMLHKW 1236
            +G E + E  + P    G+   +A+ RD+T         +L L +A E+A+   A++ AKS FLA MSHEIRTP++GV+G V +L+  A+  EQ+  L+ LKQ A  L+ +++++LD+SKI AGKM L+   + +H+ A D+    A  A  KGL+L          L +A + P        RLRQ+I N + NA+K+T++G V ++     +    + I V DTG GI   K+ +LF+PF   + ST     GTGLGL+I K L  ++ G +   +++G GS F V +P+    +P  ++ K   A P  F    VL+ +D++VNR +A  +L  L V+ +IAT+G EA+Q  ++     L LMD  MP + G  AT++LRE GV  PIVA++A+A   D E+CLA GMND+LSKP  + QL++ L KW
Sbjct:  351 NGEERYFEAHIVPY---GEDAVLALSRDITARKMAEQQLELALLQANEMAMRAEAASRAKSEFLANMSHEIRTPMNGVLGMVQLLEGTALTPEQQDMLRTLKQSAQYLLGLLDEILDLSKIEAGKMELESIPVHLHELAQDMVRLFAGRAGEKGLTL---------QLQIAPETPQWVLGDPVRLRQIIANFLSNAVKFTQQGTVTLLLAPSAAYAQGVWIGVRDTGIGIPPDKVEILFQPFTQVDRSTTRRYGGTGLGLTIAKRLAEMMGGRIGVQSQLGEGSLFYVDLPLPPAPVPEQVAPKETDALPEVFPGVRVLLAEDNEVNRKVAVRLLSRLQVQVDIATNGREALQKAIE-ENYDLVLMDCQMPEMDGYEATRRLREQGVQTPIVALTANALEEDREQCLACGMNDYLSKPVQASQLRETLAKW 768          
BLAST of jgi.p|Trimin1|173755 vs. uniprot
Match: A0A7C2FAC5_9BACT (Histidine kinase n=1 Tax=Armatimonadetes bacterium TaxID=2033014 RepID=A0A7C2FAC5_9BACT)

HSP 1 Score: 248 bits (632), Expect = 2.340e-71
Identity = 164/413 (39.71%), Postives = 243/413 (58.84%), Query Frame = 1
Query:  106 IAIVRDVTE---------------QLQLREAQEVALASTLA---KSSFLAAMSHEIRTPLHGVVGWVDILDNMAVEEEQRACLKGLKQCADSLMHIVNDVLDMSKISAGKMVLQKHNIDVHDFAHDIHATMAVIAERKGLSLTTTTSSLSSSLAVATDAPRLRQVIVNLVINAIKYTKRGGVNVVYTMQGS----SELHIVVSDTGTGIVDSKMAVLFEPF---ELST-----GTGLGLSICKSLVSLLQGTLSCVTEVGAGSTFTVTVP---VQITELPLSAKHAVAPAGFVDKVVLVVDDSKVNRSIAQHMLKLLGVKTEIATDGLEAVQYFVDGHTAS--LTLMDLIMPLLGGCAATKQLREMGVTIPIVAVSASAFVHDVEECLASGMNDHLSKPFTSQQLQDMLHKWM 1239
            +A+VR++TE               ++Q+ +AQE+ALA+  A   KS FLA +SHEIRTP++G++G V++L +  + EEQR  L  L+   D L+ ++ND+LD+SKI AG++ L+   + ++D AHD        AE KGL LT   +  + S  +  D  RLRQ++ N V NAIK+T++G   VV  ++ S      + ++V DTG GI   K A +FEPF   + ST     GTGLGL+ICK L  L+ G +   +E G GSTF V +P   V+   L         P     K +L+V+D++VNR +AQ ML    ++ EIA +G+EAVQ      TA+  L LMD  MP + G  AT++LR  GV +PI+A++A+A   D + CL  GM+D+L+KP    +LQ +L +W+
Sbjct:  341 LALVRNITERKRAELRLAELNMELEMQILQAQEMALAAATANRAKSEFLANISHEIRTPMNGILGMVELLMDTPLNEEQRDYLNTLRVSVDHLLDLLNDILDLSKIEAGRLHLESLPVALNDLAHDTARLFQARAESKGLRLTVQIAPDAPSTVLG-DPVRLRQILANFVSNAIKFTEQG--EVVVRVEPSPVYPQGVRLIVQDTGIGIPLDKQASIFEPFMQADNSTTRKYGGTGLGLAICKRLTELMGGQMGVESEPGKGSTFFVDLPLPPVEAQSLQTPEPSTTLPEIPSGKRILLVEDNEVNRKVAQRMLNKWQLEVEIAVNGIEAVQ---KATTAAYDLILMDCQMPEMDGYEATRRLRARGVRVPIIALTANAIEGDRQRCLECGMDDYLAKPIKPDELQRILTRWL 747          
BLAST of jgi.p|Trimin1|173755 vs. uniprot
Match: A0A1Y1I3B1_KLENI (Putative histidine kinase containing cheY-homologous receiver domain and PAS domain n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1I3B1_KLENI)

HSP 1 Score: 242 bits (618), Expect = 1.290e-69
Identity = 157/435 (36.09%), Postives = 241/435 (55.40%), Query Frame = 1
Query:   13 GTELIARKKDGSEMHVEVSLSPLSVGGDMHTIAIVRDVTEQLQLREAQEVALASTLAKSSFLAAMSHEIRTPLHGVVGWVDILDNMAVEEEQRACLKGLKQCADSLMHIVNDVLDMSKISAGKMVLQKHNIDVHDFAHDIHATMA-VIAERKGLSLTTTTSSLSSSLAVATDAPRLRQVIVNLVINAIKYTKRGGVNVVYTMQG----SSELHIVVSDTGTGIVDSKMAVLFEPFELS--------TGTGLGLSICKSLVSLLQGTLSCVTEVGAGSTFTVTVPVQITELPLSAKHAVAPAGFVDKV-------------VLVVDDSKVNRSIAQHMLKLLGVKTEIATDGLEAVQYFVDGHTASLTLMDLIMPLLGGCAATKQLREMGVTIPIVAVSASAFVHDVEECLASGMNDHLSKPFTSQQLQDMLHKWM 1239
            GTEL  R+K+G+E+ VE+SLSPL      + IAIVRD+T     R+  E AL ++ AKS FL+ MSHEIRTPL+GV+G  ++L    ++ +Q   ++ +++ ++SL+ ++ND+LD++KI AGK  ++    D+     D+ + +A V+A      +T    S+     VA D  RLRQV+ NL  NA+K+T+ G + V   +      S+ + I VSDTG GI  S    +F  F           +GTGLGL ICKSLV ++ G +   +  G GSTF        T L      A+ PA   D+              +LVV+D+ +N  I   ML+ + +  ++A +G++ V+         L  MDL MP + G   T+++R+ G   PI+A +AS F  DV  C+ +GM+DHL KP T+  L+ +L+KW+
Sbjct:  291 GTELSGRRKNGTELPVEISLSPLKFKDRRYVIAIVRDITS----RKITESALTASQAKSQFLSNMSHEIRTPLNGVIGMAELLQLTPLDAQQEEYVRAIQRSSESLLLLINDILDVTKIEAGKYEIRPAPCDLATLLEDVRSYLAAVLATDPDRDVTFEVQSVGPFPVVA-DKNRLRQVLFNLASNAVKFTRAGCIRVTMEVLAETPESARVKIAVSDTGIGIKKSDWGRIFRTFSQLDSADNREYSGTGLGLVICKSLVEMMGGEIGFESAAGRGSTF------WFTSLASRDPKALKPAREADEPERVGAPPRGRGLEILVVEDNAINLKIITKMLEGMNMHVDVAINGIQGVEA-AKRKEYDLIFMDLNMPKMDGYQTTREVRKSGAECPIIAFTASVFEEDVVRCIEAGMDDHLGKPMTTLALKAILNKWL 713          
BLAST of jgi.p|Trimin1|173755 vs. uniprot
Match: A0A2H5WVA1_9BACT (Histidine kinase n=1 Tax=bacterium HR15 TaxID=2035410 RepID=A0A2H5WVA1_9BACT)

HSP 1 Score: 242 bits (617), Expect = 3.470e-69
Identity = 161/414 (38.89%), Postives = 240/414 (57.97%), Query Frame = 1
Query:  106 IAIVRDVTE---------------QLQLREAQEVALASTLA---KSSFLAAMSHEIRTPLHGVVGWVDILDNMAVEEEQRACLKGLKQCADSLMHIVNDVLDMSKISAGKMVLQKHNIDVHDFAHDIHATMAVIAERKGLSLTTTTSSLSSSLAVATDAPRLRQVIVNLVINAIKYTKRGGVNVVYTMQGSS----ELHIVVSDTGTGIVDSKMAVLFEPF---ELST-----GTGLGLSICKSLVSLLQGTLSCVTEVGAGSTFTVTVPVQITELP------LSAKHAVAPAGFVDKVVLVVDDSKVNRSIAQHMLKLLGVKTEIATDGLEAVQYFVDGHTASLTLMDLIMPLLGGCAATKQLREMGVTIPIVAVSASAFVHDVEECLASGMNDHLSKPFTSQQLQDMLHKWM 1239
            +A+VR++TE               ++Q+ +AQE+ALA+  A   KS FLA MSHEIRTP++G++G V++L    + EEQR  L  L+  AD L+ ++ND+LD+SKI AG++ L+   + + D  HD        AE KGL LT   +     + +  D  RLRQ++ N + NAIK+T++G   VV  ++ S      + ++V DTG GI   + A +FEPF   + ST     GTGLGL+ICK L  L+ G +   +  G GSTF V +P+   E P      LS      P G   K +L+V+D++VNR +A  ML    ++ E+A +G+EAVQ     +   L LMD  MP + G  AT+QLR  G+ +PIVA++A+A   D ++CLA GM+D+L+KP    +L+  L +W+
Sbjct:  342 LALVRNITERKRVELRLAELNMELEMQILQAQEMALAAEAANRAKSEFLANMSHEIRTPMNGILGMVELLMGTPLNEEQRDYLNTLRVSADHLLSLLNDILDLSKIEAGRLHLEALPVVLSDLVHDTARLFQARAEAKGLRLTAQIAPDVPPVVLG-DPVRLRQILANFISNAIKFTEQG--EVVVRVEPSDLYPCGVRLMVQDTGIGIPPDRQASIFEPFAQADSSTTRKYGGTGLGLTICKRLAELMGGQIGVESAPGKGSTFYVDLPLPPAEAPSQTTPDLSEPLPEVPPG---KRILLVEDNEVNRKVALRMLSKWHLEVEVAINGVEAVQKATT-NAYDLILMDCQMPEMDGYEATRQLRARGLRVPIVALTANALEGDRQQCLACGMDDYLAKPIKPDELRRTLARWL 748          
BLAST of jgi.p|Trimin1|173755 vs. uniprot
Match: A0A7V3SMM2_9BACT (Histidine kinase n=1 Tax=Armatimonadetes bacterium TaxID=2033014 RepID=A0A7V3SMM2_9BACT)

HSP 1 Score: 244 bits (624), Expect = 3.710e-69
Identity = 168/460 (36.52%), Postives = 254/460 (55.22%), Query Frame = 1
Query:   19 ELIARKKDGSEMHVEVSLSPL--SVGGDMHTIAIVRDVTEQLQ----LREAQEVALASTLAKSSFLAAMSHEIRTPLHGVVGWVDILDNMAVEEEQRACLKGLKQCADSLMHIVNDVLDMSKISAGKMVLQKHNIDVHDFAHDIHATMAVIAERKGLSLTTTTSSLSSSLAVATDAPRLRQVIVNLVINAIKYTKRGGVNV-VYTMQGSSE--------------------LHIVVSDTGTGIVDSKMAVLFEPFELSTGT--------GLGLSICKSLVSLLQGTLSCVTEVGAGSTFTVTVPVQITELP---------LSAKHAVAPAGFVDKV------VLVVDDSKVNRSIAQHMLKLLGVKTEIATDGLEAVQYFVDGHTASLTLMDLIMPLLGGCAATKQLREM----GVTIPIVAVSASAFVHDVEECLASGMNDHLSKPFTSQQLQDMLHKW 1236
            EL+ R++DGS    E++++P+    G   H +AI +D+T++ Q    L E  E A A++ AKS FLA MSHEIRTP++G++G   +L +  + EEQ+  +  LK  A+SL+ ++ D+LD+S+I AGKM L+    D+    H +    A  A +KGL L         S ++  D  RLRQ++ N V NA+K+T++G V + V   +  SE                    + + VSDTG GI   K A +FE F  + G+        GLGL+I + L  L+ GT+   +E G GSTF VT+P+    +          LS + A A       V      VL+V+D++VNR +A  +L+ LG + ++A DG+EAV+        ++ LMD+ MP + G  AT+++RE     G    I+A++ASA   DVE+CL SGM+D+LSKP   + LQ+ML KW
Sbjct:  349 ELVNRRRDGSLYTEEMTIAPVRDEQGNITHFVAIKQDITQRKQFEQRLEEVAEQAQAASRAKSEFLANMSHEIRTPMNGILGMAQLLMDTPLNEEQKDYVTTLKDSAESLLSLLGDILDISRIEAGKMELRYEPFDLRQTVHQVARLFAARARQKGLLLQVEVDEAIPS-SLNGDELRLRQILSNFVGNAVKFTEQGSVTIRVCLAEAGSEQKANSLRRQFAIPEHFRTVWVQLTVSDTGIGIAADKQAAIFESFTQADGSATRRYGGSGLGLAINRKLTDLMGGTIGVQSEEGKGSTFWVTLPLFAPNMEQSMGIVGSGLSRRDAAADESAASGVARAAGRVLLVEDNEVNRKVAVRLLQRLGYEVDVAQDGVEAVEKTAQQRYDAV-LMDVHMPRMDGLEATRRIRERERATGGHQVIIALTASAMKEDVEQCLTSGMDDYLSKPVRLEVLQEMLEKW 806          
BLAST of jgi.p|Trimin1|173755 vs. uniprot
Match: A0A1E5CL96_9VIBR (Histidine kinase n=4 Tax=Vibrionales TaxID=135623 RepID=A0A1E5CL96_9VIBR)

HSP 1 Score: 236 bits (603), Expect = 1.260e-68
Identity = 141/373 (37.80%), Postives = 222/373 (59.52%), Query Frame = 1
Query:  142 LREAQEVALASTLAKSSFLAAMSHEIRTPLHGVVGWVDILDNMAVEEEQRACLKGLKQCADSLMHIVNDVLDMSKISAGKMVLQKHNIDVHDFAHDIHATMAVIAERKGLSLTTTTSSLSSSLAVATDAPRLRQVIVNLVINAIKYTKRGGVNVVYTMQGSSELHIVVSDTGTGIVDSKMAVLFEPFELST--------GTGLGLSICKSLVSLLQGTLSCVTEVGAGSTFTVTVPVQITELPLSAKHAVAPAGFVDKVVLVVDDSKVNRSIAQHMLKLLGVKTEIATDGLEAVQYFVDGHT-ASLTLMDLIMPLLGGCAATKQLREMGVTIPIVAVSASAFVHDVEECLASGMNDHLSKPFTSQQLQDMLHK 1233
            L +AQ+ A+ +  AKS FLA MSHEIRTPL+ V+G +DI+    +  +Q   L  ++  A+ L+ I++D+LD+SKI +G   L K  I+++D    + + +  IA++KGL L+T+ + + +      D+ RL Q++ N+V NAIK+T  G V++   +  +++L I V DTG GI   K+  LF PF  +         GTGLGL+I K LV L+ G +S  +++G GS FT+++PV       S +    P       +LVV+D+  N+ + + +L  LG    IA++GLEA +Y    H    L  MD+ MP++ G AATK +R  G+TIPI+A++A A  +D  EC   GMND ++KP  S  ++++LH+
Sbjct:  196 LTKAQQDAIKANNAKSEFLAMMSHEIRTPLNSVLGMLDIMKQTQINAQQLEILTQVESSAELLLAIISDILDVSKIESGNFSLNKQWININDTVTFVISQLQNIADKKGLKLSTS-NLIDTKKLHWIDSTRLSQILFNIVGNAIKFTPDGFVDISLNINENNQLIIKVIDTGIGIQQKKLPFLFNPFHQADSSITRRFGGTGLGLAITKHLVQLMDGKISVESKLGKGSKFTISIPVLSKCNDESQEDNNTPIESPSLNILVVEDTHTNQMVIKLLLSRLGHTVTIASNGLEAYEYIQKHHQHLDLVFMDISMPVMDGLAATKVIRSQGITIPIIALTAHAMENDKHECFRVGMNDFITKPVRSSDIEEVLHQ 567          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|173755 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YWW8_9STRA2.970e-26994.43Histidine kinase-like ATPase n=2 Tax=Tribonema min... [more]
A0A835ZDZ2_9STRA1.210e-19469.45Histidine kinase-like ATPase n=1 Tax=Tribonema min... [more]
A0A835YY89_9STRA9.400e-10144.89Uncharacterized protein n=2 Tax=Tribonema minus Ta... [more]
A0A7V5VK59_9BACT1.600e-7239.89Response regulator n=1 Tax=Armatimonadetes bacteri... [more]
A0A7V5ZG42_9BACT4.660e-7238.75Response regulator n=1 Tax=Armatimonadetes bacteri... [more]
A0A7C2FAC5_9BACT2.340e-7139.71Histidine kinase n=1 Tax=Armatimonadetes bacterium... [more]
A0A1Y1I3B1_KLENI1.290e-6936.09Putative histidine kinase containing cheY-homologo... [more]
A0A2H5WVA1_9BACT3.470e-6938.89Histidine kinase n=1 Tax=bacterium HR15 TaxID=2035... [more]
A0A7V3SMM2_9BACT3.710e-6936.52Histidine kinase n=1 Tax=Armatimonadetes bacterium... [more]
A0A1E5CL96_9VIBR1.260e-6837.80Histidine kinase n=4 Tax=Vibrionales TaxID=135623 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_106contigContig_106:42643..43884 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|173755|e_gw1.106.59.1
DescriptionPAS domain
COG categoryT
Max annot lvl28221|Deltaproteobacteria
EggNOG OGsCOG0642@1|root,COG0745@1|root,COG2202@1|root,COG0745@2|Bacteria,COG2202@2|Bacteria,COG2205@2|Bacteria,1NRP8@1224|Proteobacteria,42M0Y@68525|delta/epsilon subdivisions,2WIR4@28221|Deltaproteobacteria,2YX8P@29|Myxococcales
Evalue2.53e-67
Seed ortholog502025.Hoch_3203
Hectar predicted targeting categoryother localisation
TranscriptId174077
TrackFilteredModels1
ProteinId173755
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|173755gene_9465Tribonema minus UTEX_B_3156 geneContig_106 42643..43884 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_9465_1exon_9465_1Tribonema minus UTEX_B_3156 exonContig_106 42643..43884 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_9465CDS_9465Tribonema minus UTEX_B_3156 CDSContig_106 42643..43884 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|173755Trimin1|173755|e_gw1.106.59.1Tribonema minus UTEX_B_3156 polypeptideContig_106 42643..43884 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_9465 ID=mRNA_9465|Name=jgi.p|Trimin1|173755|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1242bp|location=Sequence derived from alignment at Contig_106:42643..43884+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGGAGTGCGCGGTACCGAATTGATAGCACGCAAGAAGGACGGGTCGGA
AATGCATGTGGAAGTATCATTGAGCCCGCTTTCCGTCGGAGGAGACATGC
ATACGATCGCTATCGTGCGCGATGTCACAGAGCAATTGCAGCTGCGAGAG
GCGCAAGAGGTCGCGCTCGCGTCGACACTTGCGAAGAGTTCGTTCTTGGC
GGCCATGTCGCACGAAATACGCACCCCATTGCACGGGGTGGTGGGGTGGG
TTGATATTTTGGATAACATGGCTGTGGAGGAGGAACAGCGAGCGTGCCTG
AAAGGCTTGAAGCAGTGCGCGGACTCGTTGATGCACATAGTCAATGATGT
TTTGGATATGTCGAAAATTAGCGCAGGAAAAATGGTCTTGCAGAAACACA
ACATCGATGTGCACGACTTCGCACATGACATCCACGCCACCATGGCCGTC
ATTGCAGAACGGAAAGGGCTGAGCCTGACGACAACCACGAGCTCACTGTC
GTCATCTTTAGCGGTGGCGACTGACGCTCCCCGCCTCCGGCAGGTGATAG
TGAACCTGGTCATCAACGCGATCAAGTACACGAAGAGAGGCGGAGTGAAT
GTGGTGTACACGATGCAGGGAAGTAGCGAGCTGCACATTGTGGTGAGCGA
CACCGGCACCGGAATCGTCGACAGCAAGATGGCGGTCTTGTTCGAACCAT
TCGAACTATCGACCGGTACCGGACTCGGACTGAGCATATGCAAGTCGCTG
GTGAGCTTGCTGCAGGGCACATTGTCGTGTGTGACTGAAGTCGGAGCGGG
ATCTACATTCACCGTTACCGTGCCAGTGCAGATCACAGAGTTGCCGCTGT
CCGCGAAGCACGCTGTGGCACCAGCAGGGTTCGTTGACAAGGTCGTTCTG
GTCGTCGACGATTCCAAGGTCAACCGGTCCATCGCGCAGCACATGCTGAA
GCTGCTGGGTGTGAAAACGGAGATTGCGACAGACGGTCTGGAAGCGGTGC
AGTACTTCGTCGACGGGCACACAGCGTCGTTGACTCTTATGGATTTAATA
ATGCCACTGCTCGGAGGCTGCGCTGCCACCAAACAGTTGCGAGAAATGGG
CGTCACGATTCCCATCGTGGCGGTGAGTGCGAGCGCGTTCGTCCACGATG
TAGAAGAATGCCTGGCCTCTGGCATGAATGACCACCTCAGCAAGCCGTTC
ACCTCACAACAATTACAGGACATGCTGCACAAGTGGATGTAG
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protein sequence of jgi.p|Trimin1|173755

>Trimin1|173755|e_gw1.106.59.1 ID=Trimin1|173755|e_gw1.106.59.1|Name=jgi.p|Trimin1|173755|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=414bp
MGVRGTELIARKKDGSEMHVEVSLSPLSVGGDMHTIAIVRDVTEQLQLRE
AQEVALASTLAKSSFLAAMSHEIRTPLHGVVGWVDILDNMAVEEEQRACL
KGLKQCADSLMHIVNDVLDMSKISAGKMVLQKHNIDVHDFAHDIHATMAV
IAERKGLSLTTTTSSLSSSLAVATDAPRLRQVIVNLVINAIKYTKRGGVN
VVYTMQGSSELHIVVSDTGTGIVDSKMAVLFEPFELSTGTGLGLSICKSL
VSLLQGTLSCVTEVGAGSTFTVTVPVQITELPLSAKHAVAPAGFVDKVVL
VVDDSKVNRSIAQHMLKLLGVKTEIATDGLEAVQYFVDGHTASLTLMDLI
MPLLGGCAATKQLREMGVTIPIVAVSASAFVHDVEECLASGMNDHLSKPF
TSQQLQDMLHKWM*
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mRNA from alignment at Contig_106:42643..43884+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_9465 ID=mRNA_9465|Name=jgi.p|Trimin1|173755|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1242bp|location=Sequence derived from alignment at Contig_106:42643..43884+ (Tribonema minus UTEX_B_3156 )
ATGGGAGTGCGCGGTACCGAATTGATAGCACGCAAGAAGGACGGGTCGGA AATGCATGTGGAAGTATCATTGAGCCCGCTTTCCGTCGGAGGAGACATGC ATACGATCGCTATCGTGCGCGATGTCACAGAGCAATTGCAGCTGCGAGAG GCGCAAGAGGTCGCGCTCGCGTCGACACTTGCGAAGAGTTCGTTCTTGGC GGCCATGTCGCACGAAATACGCACCCCATTGCACGGGGTGGTGGGGTGGG TTGATATTTTGGATAACATGGCTGTGGAGGAGGAACAGCGAGCGTGCCTG AAAGGCTTGAAGCAGTGCGCGGACTCGTTGATGCACATAGTCAATGATGT TTTGGATATGTCGAAAATTAGCGCAGGAAAAATGGTCTTGCAGAAACACA ACATCGATGTGCACGACTTCGCACATGACATCCACGCCACCATGGCCGTC ATTGCAGAACGGAAAGGGCTGAGCCTGACGACAACCACGAGCTCACTGTC GTCATCTTTAGCGGTGGCGACTGACGCTCCCCGCCTCCGGCAGGTGATAG TGAACCTGGTCATCAACGCGATCAAGTACACGAAGAGAGGCGGAGTGAAT GTGGTGTACACGATGCAGGGAAGTAGCGAGCTGCACATTGTGGTGAGCGA CACCGGCACCGGAATCGTCGACAGCAAGATGGCGGTCTTGTTCGAACCAT TCGAACTATCGACCGGTACCGGACTCGGACTGAGCATATGCAAGTCGCTG GTGAGCTTGCTGCAGGGCACATTGTCGTGTGTGACTGAAGTCGGAGCGGG ATCTACATTCACCGTTACCGTGCCAGTGCAGATCACAGAGTTGCCGCTGT CCGCGAAGCACGCTGTGGCACCAGCAGGGTTCGTTGACAAGGTCGTTCTG GTCGTCGACGATTCCAAGGTCAACCGGTCCATCGCGCAGCACATGCTGAA GCTGCTGGGTGTGAAAACGGAGATTGCGACAGACGGTCTGGAAGCGGTGC AGTACTTCGTCGACGGGCACACAGCGTCGTTGACTCTTATGGATTTAATA ATGCCACTGCTCGGAGGCTGCGCTGCCACCAAACAGTTGCGAGAAATGGG CGTCACGATTCCCATCGTGGCGGTGAGTGCGAGCGCGTTCGTCCACGATG TAGAAGAATGCCTGGCCTCTGGCATGAATGACCACCTCAGCAAGCCGTTC ACCTCACAACAATTACAGGACATGCTGCACAAGTGGATGTAG
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Coding sequence (CDS) from alignment at Contig_106:42643..43884+

>mRNA_9465 ID=mRNA_9465|Name=jgi.p|Trimin1|173755|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1242bp|location=Sequence derived from alignment at Contig_106:42643..43884+ (Tribonema minus UTEX_B_3156 )
ATGGGAGTGCGCGGTACCGAATTGATAGCACGCAAGAAGGACGGGTCGGA
AATGCATGTGGAAGTATCATTGAGCCCGCTTTCCGTCGGAGGAGACATGC
ATACGATCGCTATCGTGCGCGATGTCACAGAGCAATTGCAGCTGCGAGAG
GCGCAAGAGGTCGCGCTCGCGTCGACACTTGCGAAGAGTTCGTTCTTGGC
GGCCATGTCGCACGAAATACGCACCCCATTGCACGGGGTGGTGGGGTGGG
TTGATATTTTGGATAACATGGCTGTGGAGGAGGAACAGCGAGCGTGCCTG
AAAGGCTTGAAGCAGTGCGCGGACTCGTTGATGCACATAGTCAATGATGT
TTTGGATATGTCGAAAATTAGCGCAGGAAAAATGGTCTTGCAGAAACACA
ACATCGATGTGCACGACTTCGCACATGACATCCACGCCACCATGGCCGTC
ATTGCAGAACGGAAAGGGCTGAGCCTGACGACAACCACGAGCTCACTGTC
GTCATCTTTAGCGGTGGCGACTGACGCTCCCCGCCTCCGGCAGGTGATAG
TGAACCTGGTCATCAACGCGATCAAGTACACGAAGAGAGGCGGAGTGAAT
GTGGTGTACACGATGCAGGGAAGTAGCGAGCTGCACATTGTGGTGAGCGA
CACCGGCACCGGAATCGTCGACAGCAAGATGGCGGTCTTGTTCGAACCAT
TCGAACTATCGACCGGTACCGGACTCGGACTGAGCATATGCAAGTCGCTG
GTGAGCTTGCTGCAGGGCACATTGTCGTGTGTGACTGAAGTCGGAGCGGG
ATCTACATTCACCGTTACCGTGCCAGTGCAGATCACAGAGTTGCCGCTGT
CCGCGAAGCACGCTGTGGCACCAGCAGGGTTCGTTGACAAGGTCGTTCTG
GTCGTCGACGATTCCAAGGTCAACCGGTCCATCGCGCAGCACATGCTGAA
GCTGCTGGGTGTGAAAACGGAGATTGCGACAGACGGTCTGGAAGCGGTGC
AGTACTTCGTCGACGGGCACACAGCGTCGTTGACTCTTATGGATTTAATA
ATGCCACTGCTCGGAGGCTGCGCTGCCACCAAACAGTTGCGAGAAATGGG
CGTCACGATTCCCATCGTGGCGGTGAGTGCGAGCGCGTTCGTCCACGATG
TAGAAGAATGCCTGGCCTCTGGCATGAATGACCACCTCAGCAAGCCGTTC
ACCTCACAACAATTACAGGACATGCTGCACAAGTGGATGTAG
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