mRNA_9349 (mRNA) Tribonema minus UTEX_B_3156
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Overview
Homology
BLAST of jgi.p|Trimin1|350169 vs. uniprot
Match: A0A835YSF3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSF3_9STRA) HSP 1 Score: 1219 bits (3154), Expect = 0.000e+0 Identity = 765/765 (100.00%), Postives = 765/765 (100.00%), Query Frame = 1
Query: 1 MLAASATMTMDDFPQVLEALSTYKAEHGDADVPLQYVVPEGTGPEDIWGMRLGRRVAQLRNERDEYVAMYPERVQMLRSVGFEWGEGQQAPSVTAXXXXXXXXXXXXXXXXXXPAKVGRPARKPKVDDWEAVVTGLRTYAALHGDTRVPSRFAVPAEAPWPEALHGDKLGMRVNAIRSTGRYLQQFLAEGAKKASCGLLPERREERHTELDALGXXXXXXXXXXXXFEWKVRTSDDADEASAAGFEAVVEALQDLSILLMFXXXXXXXQVFKSLRGHTLVPSDFVVPSTEEWPQRLWGLGLGQRCSGIRRRVRNMYVAGHPQRLQQLAAIGFDCDNKNQATETKFRKIFNALMMYRDLNGTLDVPQSFAVPGEAPWPEEWWGMKLGQSVASIRSTGTFIKAHPARRAMLEAEGFDFAARRAVKGTKVRRTKAQILEDSVLEAAAAAEREQXXXXXXXVNASMAAPAQVAVNGDAAXXXXXAGELPQIGGLGGAARTSRDAAGDAAQSLLDSLVASIKNDQIMSTAAKVAAGSSTIGEAAGLVKPEDPRAVMTQLLTEFSVPPLPGTEIPMAGWPQGLPEALMXXXXQVHGMDATRRKMGVFGAAAMRXXXXXXXXXXXXXXXXXXXGGDGYVSSETTAAAGRGTFLTAAASAAGARARVAPSAPEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQQGRAIPRGVNTSDMNWMTDQERLAVAMHGFDWDEFGDGFTFEQGGYYPXXXXXXXXXXXXXXXXXTCY 2295
MLAASATMTMDDFPQVLEALSTYKAEHGDADVPLQYVVPEGTGPEDIWGMRLGRRVAQLRNERDEYVAMYPERVQMLRSVGFEWGEGQQAPSVTAXXXXXXXXXXXXXXXXXXPAKVGRPARKPKVDDWEAVVTGLRTYAALHGDTRVPSRFAVPAEAPWPEALHGDKLGMRVNAIRSTGRYLQQFLAEGAKKASCGLLPERREERHTELDALGXXXXXXXXXXXXFEWKVRTSDDADEASAAGFEAVVEALQDLSILLMFXXXXXXXQVFKSLRGHTLVPSDFVVPSTEEWPQRLWGLGLGQRCSGIRRRVRNMYVAGHPQRLQQLAAIGFDCDNKNQATETKFRKIFNALMMYRDLNGTLDVPQSFAVPGEAPWPEEWWGMKLGQSVASIRSTGTFIKAHPARRAMLEAEGFDFAARRAVKGTKVRRTKAQILEDSVLEAAAAAEREQXXXXXXXVNASMAAPAQVAVNGDAAXXXXXAGELPQIGGLGGAARTSRDAAGDAAQSLLDSLVASIKNDQIMSTAAKVAAGSSTIGEAAGLVKPEDPRAVMTQLLTEFSVPPLPGTEIPMAGWPQGLPEALMXXXXQVHGMDATRRKMGVFGAAAMRXXXXXXXXXXXXXXXXXXXGGDGYVSSETTAAAGRGTFLTAAASAAGARARVAPSAPEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQQGRAIPRGVNTSDMNWMTDQERLAVAMHGFDWDEFGDGFTFEQGGYYPXXXXXXXXXXXXXXXXXTCY
Sbjct: 1 MLAASATMTMDDFPQVLEALSTYKAEHGDADVPLQYVVPEGTGPEDIWGMRLGRRVAQLRNERDEYVAMYPERVQMLRSVGFEWGEGQQAPSVTAXXXXXXXXXXXXXXXXXXPAKVGRPARKPKVDDWEAVVTGLRTYAALHGDTRVPSRFAVPAEAPWPEALHGDKLGMRVNAIRSTGRYLQQFLAEGAKKASCGLLPERREERHTELDALGXXXXXXXXXXXXFEWKVRTSDDADEASAAGFEAVVEALQDLSILLMFXXXXXXXQVFKSLRGHTLVPSDFVVPSTEEWPQRLWGLGLGQRCSGIRRRVRNMYVAGHPQRLQQLAAIGFDCDNKNQATETKFRKIFNALMMYRDLNGTLDVPQSFAVPGEAPWPEEWWGMKLGQSVASIRSTGTFIKAHPARRAMLEAEGFDFAARRAVKGTKVRRTKAQILEDSVLEAAAAAEREQXXXXXXXVNASMAAPAQVAVNGDAAXXXXXAGELPQIGGLGGAARTSRDAAGDAAQSLLDSLVASIKNDQIMSTAAKVAAGSSTIGEAAGLVKPEDPRAVMTQLLTEFSVPPLPGTEIPMAGWPQGLPEALMXXXXQVHGMDATRRKMGVFGAAAMRXXXXXXXXXXXXXXXXXXXGGDGYVSSETTAAAGRGTFLTAAASAAGARARVAPSAPEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQQGRAIPRGVNTSDMNWMTDQERLAVAMHGFDWDEFGDGFTFEQGGYYPXXXXXXXXXXXXXXXXXTCY 765
BLAST of jgi.p|Trimin1|350169 vs. uniprot
Match: D7FJQ7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJQ7_ECTSI) HSP 1 Score: 223 bits (568), Expect = 8.880e-59 Identity = 150/420 (35.71%), Postives = 202/420 (48.10%), Query Frame = 1
Query: 25 TMDDFPQVLEALSTYKAEHGDAD-VPLQYVVPEGTGPEDIWGMRLGRRVAQLRNERDEYVAMYPERVQMLRSVGFEWGEGQQAPSVTAXXXXXXXXXXXXXXXXXXPAKVGRPARKPKVDDWEAVVTGLRTYAALHGDTRVPSRFAVPAEAPWPEALHGDKLGMRVNAIRSTGRYLQQFLAEGAKKASCGLLPERREERHTELDALGXXXXXXXXXXXXFEWKVRTSDDADEASAAGFEAVVEALQDLSILLMFXXXXXXXQVFKSLRGHTL-VPSDFVVPSTEEWPQRLWGLGLGQRCSGIRRRVRNMYVAGHPQRLQQLAAIGFDCDNKNQA-----------TETKFRKIFNALMMYRDLNGTLDVPQSFAVPGEAPWPEEWWGMKLGQSVASIRSTGTFIKAHPARRAMLEAEGFD 1245
T++DFP+++EALS YK HG +P V P PE +WGM LGR V +LRNE+ Y A YPERVQ+LR++GFEW E P D+WE ++ G+ + +HG +RVP RF VPAE PWP + G KLG R+ +R TGR+L Q + EER T L+ G FEW++R DD +A ++ SIL +V++ L G +P +VVP+ E WP R G LG + IR R + Y ++ L A+ N N TET+F K+ AL + L G VP +F VP + WPEE W +KLG+S+ +I S GTFIK +P R+A LEA GFD
Sbjct: 132 TVEDFPRIVEALSCYKRVHGHLRMIPAFRVPPNAPWPESLWGMDLGRMVHRLRNEQTVYDAQYPERVQLLRTMGFEW-EHTAVP-----------------------------------DEWELIILGIGVFFGIHGHSRVPMRFVVPAEEPWPMEIWGHKLGSRIAQMRMTGRWLGQD-------------EKTTEERRTVLEQYG------------FEWRLRVKDDEYDADGNP--------EEFSILC------EGLEVYRELGGSVPNMPPTWVVPNAEPWPIRTRGFPLGAQVRIIRSRQK--YAKDSQEKTDILLALDVPI-NPNVTNEKLGGRWGGPTETRFNKLCKALETFVVLYGHAQVPNTFEVPRDPSWPEETWDVKLGRSLVNIVSKGTFIKGYPDRQARLEALGFD 473
BLAST of jgi.p|Trimin1|350169 vs. uniprot
Match: A0A6H5JXP7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXP7_9PHAE) HSP 1 Score: 224 bits (571), Expect = 5.970e-58 Identity = 148/421 (35.15%), Postives = 201/421 (47.74%), Query Frame = 1
Query: 25 TMDDFPQVLEALSTYKAEHGDAD-VPLQYVVPEGTGPEDIWGMRLGRRVAQLRNERDEYVAMYPERVQMLRSVGFEWGEGQQAPSVTAXXXXXXXXXXXXXXXXXXPAKVGRPARKPKVDDWEAVVTGLRTYAALHGDTRVPSRFAVPAEAPWPEALHGDKLGMRVNAIRSTGRYLQQFLAEGAKKASCGLLPERREERHTELDALGXXXXXXXXXXXXFEWKVRTSDDADEASA--AGFEAVVEALQDLSILLMFXXXXXXXQVFKSLRGHTL-VPSDFVVPSTEEWPQRLWGLGLGQRCSGIRRRVRNMYVAGHPQRLQQLAAIGFDCDNK----------NQATETKFRKIFNALMMYRDLNGTLDVPQSFAVPGEAPWPEEWWGMKLGQSVASIRSTGTFIKAHPARRAMLEAEGFD 1245
T++DFP+++EALS YK HG +P V P PE +WGM LGR V +LRNE+ Y A YPERVQ+LR++GFEW E P D+WE ++ G+ + +HG +RVP RF VPAE PWP + G KLG R+ +R TGR+L Q + EER T L+ G FEW++R DD +A F + EAL+ V++ L G +P +VVP+ + WP R G LG + IR R + Y ++ L A+ + TET+F K+ AL + L G VP +F VP + WPEE W +KLG+S+ +I S GTFIK +P R+A LEA GFD
Sbjct: 246 TVEDFPRIVEALSCYKRVHGHLRMIPAFRVPPNAPWPESLWGMELGRMVHRLRNEQTIYEAQYPERVQLLRTMGFEW-EHTAVP-----------------------------------DEWELIILGIGVFFGIHGHSRVPMRFVVPAEEPWPMEIWGHKLGSRIAQMRMTGRWLGQD-------------EKTTEERRTVLEQYG------------FEWRLRVKDDEYDADGNPEEFSILCEALK----------------VYRELGGSVPNMPPTWVVPNADPWPIRTRGFPLGAQVRIIRSRQK--YAKDSQEKTDTLLALDVPINPNITNEKLGGRWGGPTETRFNKLCKALETFVMLYGHAQVPNTFEVPRDPSWPEETWDVKLGRSLVNIVSKGTFIKGYPDRQARLEALGFD 587
BLAST of jgi.p|Trimin1|350169 vs. uniprot
Match: A0A6U3VLR0_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3VLR0_9STRA) HSP 1 Score: 178 bits (451), Expect = 1.300e-42 Identity = 98/294 (33.33%), Postives = 154/294 (52.38%), Query Frame = 1
Query: 367 KPKVDDWEAVVTGLRTYAALHGDTRVPSRFAVPAEAPWPEALHGDKLGMRVNAIRSTGRYLQQFLAEGAKKASCGLLPERREERHTELDALGXXXXXXXXXXXXFEWKVRTSDDADEASAAGFEAVVEALQDLSILLMFXXXXXXXQVFKSLRGHTLVPSDFVVPSTEEWPQRLWGLGLGQRCSGIRRRVRNMYVAGHPQRLQQLAAIGFDCDNKNQATETKFRKIFNALMMYRDLNGTLDVPQSFAVPGEAPWPEEWWGMKLGQSVASIRSTGTFIKAHPARRAMLEAEGFDF 1248
KP ++W A + Y A +GD +VPSRF VP+ PWP++ G KLG RV AIR+TG+Y+Q E R LD +G F W++R + + F+ + +AL + + + G VP +FVVP + WP++ GL LG++ +R + Y+ +P ++L IGF+ D K A + +++K+++AL+ Y+++NG L +PQ F VP W EE WG++LG V +IRS GTF+K +PAR+ L+ GF++
Sbjct: 216 KPDEEEWNAAKAAFQMYKAAYGDLKVPSRFIVPSMPPWPKSAWGLKLGQRVAAIRATGKYVQGD-----------------ESRRKVLDDMG------------FLWRLRAASPDKKMDGVTFDQIYDAL------VTYRDNVHDGE------GALTVPPNFVVPDCDPWPEQTRGLPLGKKIPTVRLKS---YLKANPGAQEKLKKIGFEFDGKVAANDARYKKVYDALVRYKEINGDLLIPQPFVVPENNDWSEEMWGLRLGARVNAIRSQGTFVKTNPARKEELDELGFEW 465
BLAST of jgi.p|Trimin1|350169 vs. uniprot
Match: A0A7S1YI05_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1YI05_9STRA) HSP 1 Score: 175 bits (444), Expect = 9.290e-42 Identity = 108/303 (35.64%), Postives = 156/303 (51.49%), Query Frame = 1
Query: 349 VGRPARK-PKVDDWEAVVTGLRTYAALHGDTRVPSRFAVPAEAPWPEALHGDKLGMRVNAIRSTGRYLQQFLAEGAKKASCGLLPERREERHTELDALGXXXXXXXXXXXXFEWKVRTSDDADEASAAGFEAVVEALQDLSILLMFXXXXXXXQVFKSLRGHTLVPSDFVVPSTEEWPQRLWGLGLGQRCSGIRRRVRNMYVAGHPQRLQQLAAIGFDC-DNKNQATETKFRKIFNALMMYRDLNGTLDVPQSFAVPG-EAPWPEEWWGMKLGQSVASIRSTGTFIKAHPARRAMLEAEGFDF 1248
+ RPA + +W+AV+ R Y A +GD ++P RF VP+ PWPE G LG RV+AIR+TG+Y+ P+RR+ LD +G F W+ R D D ++ F++V+EAL Q S G VP +F VP E WP + G+ LGQ+ + I + Y HP +++L +G D+ + +F+K++ AL +Y++LNG L VPQ F VP E PWPE WG++LG V +IRS GT++ A+P RR ML+ GF F
Sbjct: 39 MARPANAMDEASEWKAVLKAFRMYKAAYGDLKIPQRFVVPSSKPWPEPAWGMPLGKRVSAIRNTGKYVTDN-------------PKRRKV----LDDMG------------FIWRARMRSDKDALASITFQSVLEALGTY--------VKEYPQTVDSTTG-IQVPLNFEVPDCEPWPVAVRGMPLGQKLAEI---SKPEYKKKHPMLIKKLEEVGMKFQDDSKHTLDGRFQKVYEALKVYKELNGDLLVPQPFIVPEKEEPWPESTWGLRLGARVNAIRSHGTYVNANPERRKMLDDLGFQF 300
BLAST of jgi.p|Trimin1|350169 vs. uniprot
Match: B5YMG0_THAPS (Predicted protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B5YMG0_THAPS) HSP 1 Score: 171 bits (434), Expect = 1.180e-40 Identity = 99/288 (34.38%), Postives = 147/288 (51.04%), Query Frame = 1
Query: 382 DWEAVVTGLRTYAALHGDTRVPSRFAVPAEAPWPEALHGDKLGMRVNAIRSTGRYLQQFLAEGAKKASCGLLPERREERHTELDALGXXXXXXXXXXXXFEWKVRTSDDADEASAAGFEAVVEALQDLSILLMFXXXXXXXQVFKSLRGHTLVPSDFVVPSTEEWPQRLWGLGLGQRCSGIRRRVRNMYVAGHPQRLQQLAAIGFDCDNKNQATETKFRKIFNALMMYRDLNGTLDVPQSFAVPGEA-PWPEEWWGMKLGQSVASIRSTGTFIKAHPARRAMLEAEGF 1242
+W+ ++ + Y A +GD +VPSRF VP APWPE KLG RV AIRSTG+Y+Q E R LD +G F W++R + FE V +AL + G VPS++VVP E WP+ GL LG+ +R + Y+ HP+ +L ++GF D K A + +++++++AL+ Y++L G L VPQ F VP ++ WPEE WG++LG V ++RS GTF+K+ P+R+ L+ GF
Sbjct: 107 EWKTILAAFQMYKAAYGDLKVPSRFVVPGMAPWPEPAWKMKLGQRVAAIRSTGKYVQN-----------------NETRRKMLDDMG------------FLWRLRAPSPGKKLDGIAFEQVYDALTTYRENVQ-------------PTGALDVPSNYVVPDCEPWPEPTRGLPLGKIIPAVRSKA---YLKNHPEAEAKLNSLGFQPDVKTAANDLRYQRVYDALVKYKELYGDLLVPQPFTVPEDSGDWPEEVWGLRLGARVNAMRSQGTFVKSDPSRKEELDNLGF 349
BLAST of jgi.p|Trimin1|350169 vs. uniprot
Match: A0A7S4MVR1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MVR1_9STRA) HSP 1 Score: 169 bits (428), Expect = 9.080e-40 Identity = 102/293 (34.81%), Postives = 151/293 (51.54%), Query Frame = 1
Query: 382 DWEAVVTGLRTYAALHGDTRVPSRFAVPAEAPWPEALHGDKLGMRVNAIRSTGRYLQQFLAEGAKKASCGLLPERREERHTELDALGXXXXXXXXXXXXFEWKVRTSDDADEASAAGFEAVVEALQDLSILLMFXXXXXXXQVFKSLRGHTL-VPSDFVVPSTEEWPQRLWGLGLGQRCSGIRRRVRNMYVAGHPQRLQQLAAIGFDCDNKNQATETKFRKIFNALMMYRDLNGTLDVPQSFAVP-----GEAPWPEEWWGMKLGQSVASIRSTGTFIKAHPARRAMLEAEGF 1242
+W AVV LR Y A +GD +VPSRF VP PWPEA G KLG RV+AIRSTG+Y Q + R + LD +G F W++R+ + F+ + AL+ V S +G + VP++FVVP+ + WP GL LG++ IR + Y+ +P +L +GF+ D K A + +++++++AL+ Y++LNG L VPQ F +P G W E+ G++LG V ++RS GTF+K +P RR L+ GF
Sbjct: 132 EWTAVVESLRMYKAAYGDLKVPSRFVVPGMPPWPEAGWGLKLGQRVSAIRSTGKYNVQS----------------DDARRSALDDMG------------FLWRLRSPSGDKKMDGITFDQIYVALETYK------------SVIGSGKGGKINVPANFVVPNADPWPVSTRGLPLGKKIPAIRSKA---YLKSNPGASDKLNELGFEFDGKIAANDQRYKRVYDALVRYKELNGDLLVPQPFVIPEDGQAGAEEWNEDARGLRLGARVNAVRSQGTFVKTNPGRRRELDELGF 381
BLAST of jgi.p|Trimin1|350169 vs. uniprot
Match: A0A7S3QCY2_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QCY2_9STRA) HSP 1 Score: 169 bits (427), Expect = 1.130e-39 Identity = 98/296 (33.11%), Postives = 156/296 (52.70%), Query Frame = 1
Query: 364 RKPKVDDWEAVVTGLRTYAALHGDTRVPSRFAVPAEAPWPEALHGDKLGMRVNAIRSTGRYLQQFLAEGAKKASCGLLPERREERHTELDALGXXXXXXXXXXXXFEWKVRTSDDADEASAAGFEAVVEALQDLSILLMFXXXXXXXQVFKSLRGHTLVPSDFVVPSTEEWPQRLWGLGLGQRCSGIRRRVRNMYVAGHPQRLQQLAAIGFDCDNKNQATETKFRKIFNALMMYRDLNGTLDVPQSFAVP-GEAPWPEEWWGMKLGQSVASIRSTGTFIKAHPARRAMLEAEGFDF 1248
+K +W A++ + Y A +GD +VPSRF VP+ PWPE+ G KLG RV +IRSTG+Y+ +ER LD +G F W++R D+ FE + +AL Q +SL VP++F+VP+ + WP+ G+ LG++ +R + Y+ +P ++L+ IGF+ D K A + +F +++AL+ Y+++NG L VPQ F V G + W E +WG++LG V +IRS GTF+K +P+R+ +L GF++
Sbjct: 119 KKSDSTEWNALLASFQMYKAAYGDLKVPSRFVVPSMPPWPESGWGLKLGQRVASIRSTGKYVDDD-----------------DERRKVLDDMG------------FLWRLRAPS-PDKKVDVTFEQIYDAL---------VTYRKEIQTDESLT----VPTNFIVPNYDPWPEASRGMPLGKKIPTVRSKA---YLKANPGAKEKLSEIGFEFDGKVAANDARFNNVYDALVRYKEINGDLLVPQPFIVAEGSSDWEERFWGLRLGARVNAIRSQGTFVKTNPSRKELLNKLGFEW 368
BLAST of jgi.p|Trimin1|350169 vs. uniprot
Match: A0A7S2JR57_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2JR57_9STRA) HSP 1 Score: 164 bits (416), Expect = 1.060e-38 Identity = 97/288 (33.68%), Postives = 142/288 (49.31%), Query Frame = 1
Query: 382 DWEAVVTGLRTYAALHGDTRVPSRFAVPAEAPWPEALHGDKLGMRVNAIRSTGRYLQQFLAEGAKKASCGLLPERREERHTELDALGXXXXXXXXXXXXFEWKVRTSDDADEASAAGFEAVVEALQDLSILLMFXXXXXXXQVFKSLRGHTLVPSDFVVPSTEEWPQRLWGLGLGQRCSGIRRRVRNMYVAGHPQRLQQLAAIGFDCDNKNQATETKFRKIFNALMMYRDLNGTLDVPQSFAVPGEAP-WPEEWWGMKLGQSVASIRSTGTFIKAHPARRAMLEAEGF 1242
+W A++ + Y A +GD +VPSRF VP+ PWPE+ G KLG +V AIRSTG+Y+ E + R LD +G F W++R+ + FE + +AL +K G+ VP F VP E WPQ GL LG + + IR + Y+ P++ ++L +G D K A ++ +++AL+ Y+++ G L VPQ F VP EA W E +WG++LG V +IRS GTF+ P+RR L GF
Sbjct: 98 EWRAILASFKMYKAAYGDLKVPSRFVVPSMPPWPESGWGLKLGTKVAAIRSTGKYV-----------------ENDDGRRQILDDIG------------FLWRLRSPSPDKKMDGVKFEQIYDALVQ----------------YKKEFGNLDVPITFSVPDIESWPQHSRGLPLGSKLATIRSKT---YLKNRPEQRKKLEELGLQLDGKVAANSARYHLVYDALVRYKEIYGDLLVPQPFVVPKEAEDWNEPFWGLRLGARVNAIRSQGTFVNTDPSRREELSELGF 337
BLAST of jgi.p|Trimin1|350169 vs. uniprot
Match: B7FW16_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FW16_PHATC) HSP 1 Score: 142 bits (358), Expect = 3.690e-31 Identity = 102/352 (28.98%), Postives = 164/352 (46.59%), Query Frame = 1
Query: 346 KVGRPARKPKVDDWEAVVTGLRTYAALHGDTRVPSRFAVPAEAPWPEALHGDKLGMRVNAIRSTGRYLQQFLAEGAKKASCGLLPERREERHTELDALGXXXXXXXXXXXXFEWKVRTSDDADEASAAGFEAVVEALQDLSILLMFXXXXXXXQVFKSLRGHTLVPSDFVVPSTEEWPQRLWGLGLGQRCSG---------IRRRVRNMYVAGHPQRLQQLAAIGFD--------------CDNKNQATETKFRKIFNALMMYRDLNGTLDVPQSFAVPGEAPWPEEWWGMKLGQSVASIRSTGTFIKAHPARRAMLEAEGFDFAARRAVKGTKVRRTKAQILEDSVLEAAA 1332
+ G A+ +W AV+ L Y A GD +VP +F VP +PWP+ G KLG V IR TG+Y+ R++R L+ LG F W R++ A A + V Q L+ L+ + +++ VP+ ++VP E WP+R+ GL LG + + I+ +++++ V L ++G + A + +F K++ AL Y+D+ G L VPQ FAVP +APWP+E WG++LG V ++RS GTF+ A+P RR L+ GF ++ + +V+ +A L D+ + A+A
Sbjct: 141 ETGSTAKDDDTAEWRAVLAALTLYQAAFGDVKVPQKFIVPTASPWPKPAWGLKLGKVVANIRLTGKYIHG-----------------RDKRKQALEKLG------------FLWAARSTPQT-RAEAEDDRSNVTVEQILAALVAYR---------ENVAPLGPVPAKYIVPDAEPWPERVRGLPLGSQLARLPMDQLPETIQAKLQDLGVMERYMPLASSGSMGAPPTAPVVSGEAYQSASNVPPTANDIRFHKVYLALRTYKDVYGDLLVPQPFAVPSKAPWPQETWGLRLGARVNAVRSQGTFVNANPDRRQALDDLGFVWSPPKE-GSRRVKSREANSLPDTAIPASA 452 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|350169 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_9349 ID=mRNA_9349|Name=jgi.p|Trimin1|350169|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2298bp|location=Sequence derived from alignment at Contig_58:225..11877- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGCTGGCCGCCTCCGCCACCATGACCATGGACGACTTCCCGCAGGTGCTback to top protein sequence of jgi.p|Trimin1|350169 >Trimin1|350169|estExt_Genemark1.C_Ctg_580001 ID=Trimin1|350169|estExt_Genemark1.C_Ctg_580001|Name=jgi.p|Trimin1|350169|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=766bp MLAASATMTMDDFPQVLEALSTYKAEHGDADVPLQYVVPEGTGPEDIWGMback to top mRNA from alignment at Contig_58:225..11877- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_9349 ID=mRNA_9349|Name=jgi.p|Trimin1|350169|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=11653bp|location=Sequence derived from alignment at Contig_58:225..11877- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_58:225..11877- >mRNA_9349 ID=mRNA_9349|Name=jgi.p|Trimin1|350169|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=2298bp|location=Sequence derived from alignment at Contig_58:225..11877- (Tribonema minus UTEX_B_3156 )back to top |