mRNA_9311 (mRNA) Tribonema minus UTEX_B_3156
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Overview
Homology
BLAST of jgi.p|Trimin1|165483 vs. uniprot
Match: A0A836CF65_9STRA (Putative RNA lariat debranching enzyme n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CF65_9STRA) HSP 1 Score: 789 bits (2037), Expect = 4.080e-289 Identity = 372/372 (100.00%), Postives = 372/372 (100.00%), Query Frame = 1
Query: 1 MLNVVVEGCSHGELDPIYASVARIEEAASIKVDLLLCCGDFQSLRDAGDFEGMAVPAHHRHLASFHDYYHGRKVAPVLTIFIGGNHEASNYLQELHYGGWVAPNIYFLGFSGVVNVGGIRIGGLTGIYNHRHYSLGHFEAPPYSPDTLRSVYHVREYDVYKLAQLTGKVDIMMSHDWPRGIARHGNVGRLLQRKSYFREEIEDNTLGSPPAEQLLHMLKPAYWFSAHLHTKFAALVKHDDGTETRFLALDKCLPNREFLQLVSLPRPTGRGAPVLRYDPEWLAIVKKTHHLLSSHRGNVYLPTECERVTDEEIADVRKRFDRVPHNFNPPPRPHNGGAGALQGDPQVLDRVCSFIMHTGRLCVYVYVCGPRA 1116
MLNVVVEGCSHGELDPIYASVARIEEAASIKVDLLLCCGDFQSLRDAGDFEGMAVPAHHRHLASFHDYYHGRKVAPVLTIFIGGNHEASNYLQELHYGGWVAPNIYFLGFSGVVNVGGIRIGGLTGIYNHRHYSLGHFEAPPYSPDTLRSVYHVREYDVYKLAQLTGKVDIMMSHDWPRGIARHGNVGRLLQRKSYFREEIEDNTLGSPPAEQLLHMLKPAYWFSAHLHTKFAALVKHDDGTETRFLALDKCLPNREFLQLVSLPRPTGRGAPVLRYDPEWLAIVKKTHHLLSSHRGNVYLPTECERVTDEEIADVRKRFDRVPHNFNPPPRPHNGGAGALQGDPQVLDRVCSFIMHTGRLCVYVYVCGPRA
Sbjct: 1 MLNVVVEGCSHGELDPIYASVARIEEAASIKVDLLLCCGDFQSLRDAGDFEGMAVPAHHRHLASFHDYYHGRKVAPVLTIFIGGNHEASNYLQELHYGGWVAPNIYFLGFSGVVNVGGIRIGGLTGIYNHRHYSLGHFEAPPYSPDTLRSVYHVREYDVYKLAQLTGKVDIMMSHDWPRGIARHGNVGRLLQRKSYFREEIEDNTLGSPPAEQLLHMLKPAYWFSAHLHTKFAALVKHDDGTETRFLALDKCLPNREFLQLVSLPRPTGRGAPVLRYDPEWLAIVKKTHHLLSSHRGNVYLPTECERVTDEEIADVRKRFDRVPHNFNPPPRPHNGGAGALQGDPQVLDRVCSFIMHTGRLCVYVYVCGPRA 372
BLAST of jgi.p|Trimin1|165483 vs. uniprot
Match: A0A4D9D7I0_9STRA (DBR1 domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D7I0_9STRA) HSP 1 Score: 421 bits (1083), Expect = 2.250e-140 Identity = 220/412 (53.40%), Postives = 272/412 (66.02%), Query Frame = 1
Query: 4 LNVVVEGCSHGELDPIYASVARIEEAASIKVDLLLCCGDFQSLRDAGDFEGMAVPAHHRHLASFHDYYHGRKVAPVLTIFIGGNHEASNYLQELHYGGWVAPNIYFLGFSGVVNVGGIRIGGLTGIYNHRHYSLGHFEAPPYSPDTLRSVYHVREYDVYKLAQL---------TGKVDIMMSHDWPRGIARHGNVGRLLQRKSYFREEIEDNTLGSPPAEQLLHMLKPAYWFSAHLHTKFAALVKHDDGTE--------TRFLALDKCLPNREFLQLVSLPRPTGRGA-PV-LRYDPEWLAIVKKTHHLLSSHRGNVYLPTECERVTDEEIADVRKR----------------------FDRVPHNFNPPPRPHNGGAGALQGDPQVLDRVCSFIMHTGRLCVYVYVCGPRA 1116
L +VVEGC HGELD IYAS+A IE+ + VDLL+CCGDFQ++R+ D + M VP+ + +ASFH YY G KVAPVLTIFIGGNHEASN+LQEL+YGGWVAPNIY+LG SGVV+VGG+RI G++GIYN R Y GHFE PPYSP TLRS+YHVREY+V+KLAQL + VD+M+SHDWPRGI HG++G+LL+ K YFR+E E NTLGS AE LL++L+P+YWF+ HLH KFAA+V+H T T+FLALDKCLPNR+FLQLV +PRP R PV L YD EWLAI++ TH LLS V LP E RV +++ VR R F + P G G+L+G PQ D + + R+ V C P+A
Sbjct: 85 LRIVVEGCCHGELDQIYASIALIEQESGQNVDLLICCGDFQAVRNKEDLKSMNVPSKYLTMASFHRYYSGEKVAPVLTIFIGGNHEASNHLQELYYGGWVAPNIYYLGCSGVVSVGGVRIAGISGIYNGRDYHRGHFEVPPYSPSTLRSIYHVREYEVFKLAQLASGSGARGDSAHVDVMLSHDWPRGIYHHGDMGQLLRTKPYFRKECETNTLGSQAAELLLNLLQPSYWFAGHLHCKFAAVVRHSSSTSQMSTPAKVTKFLALDKCLPNRDFLQLVEIPRPPDRWEQPVRLEYDLEWLAILRSTHSLLSRAEREVVLPRESRRVAPDDLEWVRARLAAACKRRGDDPSQALEIQPDAFVKTAPVHEPSSTDGLHGGGSLRGSPQT-DALLKLLELGHRVTVPYTPCPPQA 495
BLAST of jgi.p|Trimin1|165483 vs. uniprot
Match: A0A1L8DFX6_9DIPT (Putative rna lariat debranching enzyme (Fragment) n=1 Tax=Nyssomyia neivai TaxID=330878 RepID=A0A1L8DFX6_9DIPT) HSP 1 Score: 394 bits (1012), Expect = 1.120e-132 Identity = 192/335 (57.31%), Postives = 239/335 (71.34%), Query Frame = 1
Query: 4 LNVVVEGCSHGELDPIYASVARIEEAASIKVDLLLCCGDFQSLRDAGDFEGMAVPAHHRHLASFHDYYHGRKVAPVLTIFIGGNHEASNYLQELHYGGWVAPNIYFLGFSGVVNVGGIRIGGLTGIYNHRHYSLGHFEAPPYSPDTLRSVYHVREYDVYKLAQLTGKVDIMMSHDWPRGIARHGNVGRLLQRKSYFREEIEDNTLGSPPAEQLLHMLKPAYWFSAHLHTKFAALVKHDDGTETRFLALDKCLPNREFLQLVSLPRPTGRGAPV-LRYDPEWLAIVKKTHHLLSSHRGNVYLP----TECERVT--DEEIADVRKRFDRVPHNFNP 987
+ + VEGC+HGEL+ IY +V IE+ IKVDLL+CCGDFQS R+ D MAVP +R + +F+ YY G K AP+LT+FIGGNHEASNYLQEL YGGWVAP IY+LG++GV+ VGG+RI GL+GI+ Y GHFE PPYS T+RSVYH+R +V++L QL+GKVD+ +SHDWPRGI HGN +L++ K +FREEIE NTLG+ E LL+ LKP YWFSAHLH KFAA V+HD+GT T+FLALDKCLPNR FLQ++ + + + L YD EWL IVK T+HLLS Y+P TE + T DEE A V +P NF P
Sbjct: 1 MRIAVEGCAHGELEKIYDTVEYIEKEQGIKVDLLICCGDFQSTRNLEDLNCMAVPPKYRDICTFYKYYSGEKKAPILTMFIGGNHEASNYLQELPYGGWVAPRIYYLGYAGVITVGGVRIAGLSGIFKAHDYHKGHFEMPPYSDSTVRSVYHIRNLEVFRLKQLSGKVDVCLSHDWPRGIYHHGNAEQLMRFKPFFREEIERNTLGNETCEDLLNFLKPNYWFSAHLHCKFAATVQHDEGTTTKFLALDKCLPNRRFLQILEVGEDVAKQEELKLYYDHEWLTIVKLTNHLLSVKHVTNYMPGPGGTERYQFTPTDEEKASVEMNLV-IPENFVP 334
BLAST of jgi.p|Trimin1|165483 vs. uniprot
Match: D7FTN4_ECTSI (DBR1 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTN4_ECTSI) HSP 1 Score: 392 bits (1006), Expect = 5.050e-131 Identity = 195/338 (57.69%), Postives = 247/338 (73.08%), Query Frame = 1
Query: 88 IKVDLLLCCGDFQSLRDAGDFEGMAVPAHHRHLASFHDYYHGRKVAPVLTIFIGGNHEASNYLQELHYGGWVAPNIYFLGFSGVVNVGGIRIGGLTGIYNHRHYSLGHFEAPPYSPDTLRSVYHVREYDVYKLAQLTGKVDIMMSHDWPRGIARHGNVGRLLQRKSYFREEIEDNTLGSPPAEQLLHMLKPAYWFSAHLHTKFAALVKHD--------DGTE----TRFLALDKCLPNREFLQLVSLPRPTGR----GAP--------VLRYDPEWLAIVKKTHHLLSSHRGNVYLPTECERVTDEEIADVRKRFDR---------VPHNFN---PPP 993
IKVDLL+CCGDFQ LR+ DF+G+A P ++HL +FH YY G VAPVLTIFIGGNHEAS+YLQELHYGGWVAPNIYFLGF+GVV VGG+RI G+TGI+N R Y G E PPY+ DTLRSVY+VRE +V+KLAQLTG VD+++SHDWPRGI R+G+ L ++K +F+ E+EDNTLGS AEQLLH ++P YWF+AHLH KF A+V+H +G+E TRFL+LDKCLP+R+FLQLVS+PRP G+ GA +L YD EWL+IV+++H+LLS+ RG+V +P E RV E++A +R+ +P NF PPP
Sbjct: 21 IKVDLLICCGDFQCLRNTQDFDGLACPDKYKHLGTFHKYYSGELVAPVLTIFIGGNHEASSYLQELHYGGWVAPNIYFLGFAGVVRVGGVRIAGMTGIFNGRSYKEGRHERPPYNRDTLRSVYYVRELEVFKLAQLTGHVDLVLSHDWPRGIVRYGDARYLFRKKPFFKAEVEDNTLGSAAAEQLLHKVQPDYWFAAHLHVKFPAVVRHGSPREGQGREGSEVKGVTRFLSLDKCLPHRDFLQLVSVPRPEGQEQGPGAAGGGEGDEVLLEYDVEWLSIVQESHYLLSNSRGHVDMPFETPRVQVEQMASIREALAARGLPGGPLVIPENFAMTAPPP 358
BLAST of jgi.p|Trimin1|165483 vs. uniprot
Match: UPI001EB035F3 (lariat debranching enzyme B-like n=2 Tax=Haliotis TaxID=6452 RepID=UPI001EB035F3) HSP 1 Score: 394 bits (1013), Expect = 5.350e-130 Identity = 187/339 (55.16%), Postives = 246/339 (72.57%), Query Frame = 1
Query: 4 LNVVVEGCSHGELDPIYASVARIEEAASIKVDLLLCCGDFQSLRDAGDFEGMAVPAHHRHLASFHDYYHGRKVAPVLTIFIGGNHEASNYLQELHYGGWVAPNIYFLGFSGVVNVGGIRIGGLTGIYNHRHYSLGHFEAPPYSPDTLRSVYHVREYDVYKLAQLTGKVDIMMSHDWPRGIARHGNVGRLLQRKSYFREEIEDNTLGSPPAEQLLHMLKPAYWFSAHLHTKFAALVKHD--DGTE--TRFLALDKCLPNREFLQLVSLPRPTGRGAPVLRYDPEWLAIVKKTHHLLSSHRGNVYLPTECE------RVTDEEIADVRKRFD---RVPHNF 981
+ + VEGC HGELD IY ++ +E+ ++ VDLLL CGDFQ++R+ D MAVP ++ L +F+ YY G KVAPVLTIFIGGNHEASNYLQEL YGGWVAPNIY++G+ G+V VGGIRIGGL+GIY + + GHFE PPY+ T RSVYHVR +V++ Q++ +DI +SHDWPRG+ G+V L+++KS+F+EEIE NTLGSPPAE+LLH L+P+YWFSAHLH KFAALV+H DG E T+FL+LDKCLP R+FLQ++ +P T + + DPEWL I+K T+HLL+ Y+P +VTD+E+ +R FD +P+NF
Sbjct: 1 MKIAVEGCCHGELDKIYETIQHLEKKNNMTVDLLLICGDFQAVRNRADLPCMAVPPKYQRLNTFYKYYSGEKVAPVLTIFIGGNHEASNYLQELPYGGWVAPNIYYMGYGGIVQVGGIRIGGLSGIYKGKDFQRGHFERPPYNDSTKRSVYHVRNLEVFRFKQISRPIDIFLSHDWPRGVYHFGDVNGLVRQKSFFKEEIETNTLGSPPAEELLHFLQPSYWFSAHLHVKFAALVQHKAMDGVEKTTKFLSLDKCLPKRKFLQVIDVPHDTSQAMKI-HLDPEWLMILKLTNHLLNLSPSTRYMPGPGSNDRWDFKVTDQEMETIRDNFDGNLALPYNF 338
BLAST of jgi.p|Trimin1|165483 vs. uniprot
Match: UPI001E2708D9 (lariat debranching enzyme n=1 Tax=Melitaea cinxia TaxID=113334 RepID=UPI001E2708D9) HSP 1 Score: 390 bits (1001), Expect = 1.110e-129 Identity = 183/328 (55.79%), Postives = 241/328 (73.48%), Query Frame = 1
Query: 4 LNVVVEGCSHGELDPIYASVARIEEAASIKVDLLLCCGDFQSLRDAGDFEGMAVPAHHRHLASFHDYYHGRKVAPVLTIFIGGNHEASNYLQELHYGGWVAPNIYFLGFSGVVNVGGIRIGGLTGIYNHRHYSLGHFEAPPYSPDTLRSVYHVREYDVYKLAQLTGKVDIMMSHDWPRGIARHGNVGRLLQRKSYFREEIEDNTLGSPPAEQLLHMLKPAYWFSAHLHTKFAALVKHDDGTETRFLALDKCLPNREFLQLVSLPRPTGRGAPVLRYDPEWLAIVKKTHHLLSSHRGNVYLPT--ECERV----TDEEIADVRKRFDRV 969
+ + VEGC+HGEL+ IY + ++E ++K+DLL+CCGDFQS+R+ D GMAVP ++ + +F+ YY G KVAP+LT+FIGGNHEASNYLQEL YGGWVAPNIY+LG +GVV G +RIGGL+GI+ Y G +E PPY+ +LRSVYH+R DVY+L+Q+ K+D+M+SHDWPRGI +G+ LL+RK +FRE+IE N LGSPPAE+L+H LKP YWF+AHLH +FAA+V H++ ET+FLALDKCLP R LQ++ LP G +L+YD EWLAI+K T+HLLS N +LP ER T +EI V K F+ +
Sbjct: 1 MKIAVEGCAHGELETIYECIEFLQEEQNVKIDLLICCGDFQSVRNNDDLRGMAVPEKYQSICTFYKYYSGEKVAPILTLFIGGNHEASNYLQELPYGGWVAPNIYYLGRAGVVRFGNLRIGGLSGIFKGHDYLQGLWECPPYTQSSLRSVYHIRALDVYRLSQVKTKIDVMLSHDWPRGITNYGDRNELLRRKPFFREDIESNRLGSPPAEKLIHELKPKYWFAAHLHCQFAAVVGHENDEETKFLALDKCLPKRRHLQILDLPS-NYNGDMLLKYDSEWLAILKNTNHLLSVKNINCHLPGPGSDERYDFTPTPDEIQAVEKAFESL 327
BLAST of jgi.p|Trimin1|165483 vs. uniprot
Match: UPI0008743B2A (lariat debranching enzyme n=1 Tax=Anoplophora glabripennis TaxID=217634 RepID=UPI0008743B2A) HSP 1 Score: 389 bits (1000), Expect = 1.480e-129 Identity = 186/335 (55.52%), Postives = 241/335 (71.94%), Query Frame = 1
Query: 4 LNVVVEGCSHGELDPIYASVARIEEAASIKVDLLLCCGDFQSLRDAGDFEGMAVPAHHRHLASFHDYYHGRKVAPVLTIFIGGNHEASNYLQELHYGGWVAPNIYFLGFSGVVNVGGIRIGGLTGIYNHRHYSLGHFEAPPYSPDTLRSVYHVREYDVYKLAQLTGKVDIMMSHDWPRGIARHGNVGRLLQRKSYFREEIEDNTLGSPPAEQLLHMLKPAYWFSAHLHTKFAALVKHDDGTETRFLALDKCLPNREFLQLVSLPRPTGRGAPVLRYDPEWLAIVKKTHHLLSSHRGNVYLP----TECERVT--DEEIADVRKRFD---RVPHNF 981
+ + +EGC+HGEL+ IY ++ +EE SIK+DLL+CCGDFQS R+ GD MAVP + + SF+ YY G K AP+LTIFIGGNHE+SNYLQEL YGGWVAPNIY++G +GVVNVGG+RIGGL+GIY R Y+ GHFE PY +T RSVYH+R ++++L QL+G +DI +SHDWP GI + GN+ +LL+RK +F++++E LG+ P E+LL+ LKP+YWFSAHLH KFAALV HDD + T+FLALDKCLP R+FLQ+V +P T V YD EWL I+ T+HLL N Y+P E T +E V RF+ RVP+NF
Sbjct: 1 MKIAIEGCAHGELENIYETIQLLEEKESIKIDLLICCGDFQSSRNEGDLLCMAVPPKYAKICSFYKYYTGEKKAPILTIFIGGNHESSNYLQELPYGGWVAPNIYYMGCAGVVNVGGVRIGGLSGIYKSRDYTKGHFEKAPYDENTKRSVYHIRNLEIFRLKQLSGPLDIFLSHDWPNGIYKFGNISQLLKRKPFFKDDVESGQLGNKPIEELLYQLKPSYWFSAHLHCKFAALVTHDDTSITKFLALDKCLPKRKFLQIVDVPHDTESKIEV-NYDLEWLTILFLTNHLLCVKNINTYMPGPGGNERYNFTPSEENKQQVLARFNNELRVPNNF 334
BLAST of jgi.p|Trimin1|165483 vs. uniprot
Match: R7U1B4_CAPTE (DBR1 domain-containing protein n=1 Tax=Capitella teleta TaxID=283909 RepID=R7U1B4_CAPTE) HSP 1 Score: 390 bits (1002), Expect = 2.140e-129 Identity = 190/340 (55.88%), Postives = 239/340 (70.29%), Query Frame = 1
Query: 4 LNVVVEGCSHGELDPIYASVARIEEAASIKVDLLLCCGDFQSLRDAGDFEGMAVPAHHRHLASFHDYYHGRKVAPVLTIFIGGNHEASNYLQELHYGGWVAPNIYFLGFSGVVNVGGIRIGGLTGIYNHRHYSLGHFEAPPYSPDTLRSVYHVREYDVYKLAQLTGKVDIMMSHDWPRGIARHGNVGRLLQRKSYFREEIEDNTLGSPPAEQLLHMLKPAYWFSAHLHTKFAALVKHDDGTE-----TRFLALDKCLPNREFLQLVSLPRPTGRGAPVLRYDPEWLAIVKKTHHLLSSHRGNVYLPTE--CER----VTDEEIADVRKRFDR---VPHNF 981
+ + VEGC HGELD IY ++A IEE KVDLLL CGDFQ++R+ DF +AVP R + +F+ YY G APVLT+ IGGNHEASNY+QEL YGGW+A NIY+LG++GVV GG+RIGGL+GI+ R ++ GHFE PPY+ DT RS YHVR DV++L Q+ VDIM+SHDWP+ I HGN RLLQ+K +F++E+E TLGS PAEQLLH LKP+YWFSAHLH KFAA V HD E T+FLALDKCLP R+FLQ++ P + L DPEWL I++ T+HL++ RG Y+P ER TDEE++D+R+ F VP NF
Sbjct: 1 MKIAVEGCCHGELDKIYETIAFIEEKEKYKVDLLLICGDFQAVRNPSDFHALAVPPKFRKMNTFYKYYSGEAKAPVLTVLIGGNHEASNYMQELPYGGWLAENIYYLGYAGVVQFGGLRIGGLSGIFKGRDFNKGHFEHPPYNEDTKRSCYHVRSLDVFRLKQIQKPVDIMLSHDWPQNIYHHGNTRRLLQKKKFFQQEVEAGTLGSAPAEQLLHHLKPSYWFSAHLHVKFAARVAHDVAEEDPRKDTKFLALDKCLPRRKFLQIIDFPDQEDKSLE-LELDPEWLCILRSTNHLMNLGRGAQYMPGPGCSERYDFSTTDEELSDIRETFGSTFSVPDNF 339
BLAST of jgi.p|Trimin1|165483 vs. uniprot
Match: A0A821WMQ8_9NEOP (Hypothetical protein n=5 Tax=Pieris TaxID=7115 RepID=A0A821WMQ8_9NEOP) HSP 1 Score: 389 bits (999), Expect = 2.690e-129 Identity = 179/301 (59.47%), Postives = 232/301 (77.08%), Query Frame = 1
Query: 4 LNVVVEGCSHGELDPIYASVARIEEAASIKVDLLLCCGDFQSLRDAGDFEGMAVPAHHRHLASFHDYYHGRKVAPVLTIFIGGNHEASNYLQELHYGGWVAPNIYFLGFSGVVNVGGIRIGGLTGIYNHRHYSLGHFEAPPYSPDTLRSVYHVREYDVYKLAQLTGKVDIMMSHDWPRGIARHGNVGRLLQRKSYFREEIEDNTLGSPPAEQLLHMLKPAYWFSAHLHTKFAALVKHDDGTETRFLALDKCLPNREFLQLVSLPRPTGRGAPVLRYDPEWLAIVKKTHHLLSSHRGNVYLP 906
+ + VEGC+HGEL+ IY V ++E IKVDLL+CCGDFQS+R+ D MAVP + ++ +F+ YY G KVAP+LTIFIGGNHEASNYLQEL +GGWVAPNIY+LG +GVV G +R+GGL+GI+ + Y G +E+PPY+P++LRSVYH+R DV++L+QL KV +M+SHDWPRGI +G+ LL+RK +FRE+IE N LGSPPAEQLL+ +KP YWF+AHLH +FAALVKHDD +ET+FLALDKCLP R LQ++ LP G L++D EWLAI+K T+HLLS + +LP
Sbjct: 1 MKIAVEGCAHGELEKIYECVETLQEREGIKVDLLICCGDFQSVRNNDDLRAMAVPEKYHNICTFYKYYSGEKVAPILTIFIGGNHEASNYLQELPFGGWVAPNIYYLGRAGVVQFGNLRLGGLSGIFKNHDYLQGLWESPPYTPNSLRSVYHIRSLDVFRLSQLKEKVHVMLSHDWPRGITNYGDKNNLLRRKPFFREDIESNKLGSPPAEQLLNQVKPDYWFAAHLHCQFAALVKHDDNSETKFLALDKCLPKRRHLQILDLPSEFA-GDKQLKHDLEWLAILKNTNHLLSVKNIDCHLP 300
BLAST of jgi.p|Trimin1|165483 vs. uniprot
Match: C3YYS1_BRAFL (DBR1 domain-containing protein n=5 Tax=Branchiostoma TaxID=7737 RepID=C3YYS1_BRAFL) HSP 1 Score: 390 bits (1002), Expect = 3.630e-129 Identity = 189/341 (55.43%), Postives = 246/341 (72.14%), Query Frame = 1
Query: 4 LNVVVEGCSHGELDPIYASVARIEEAASIKVDLLLCCGDFQSLRDAGDFEGMAVPAHHRHLASFHDYYHGRKVAPVLTIFIGGNHEASNYLQELHYGGWVAPNIYFLGFSGVVNVGGIRIGGLTGIYNHRHYSLGHFEAPPYSPDTLRSVYHVREYDVYKLAQLTGKVDIMMSHDWPRGIARHGNVGRLLQRKSYFREEIEDNTLGSPPAEQLLHMLKPAYWFSAHLHTKFAALVKHD-DGTET----RFLALDKCLPNREFLQLVSLPRPTGRGAPV-LRYDPEWLAIVKKTHHLLSSHRGNVYLPTECE------RVTDEEIADVRKRFD---RVPHNF 981
+ + VEGC+HG L+ IY ++ +E+ I+V+LLLCCGDFQ++R+A D E MAVP R + SFH YY G K AP LTIFIGGNHEASNYL EL YGGWVAPNIY+LG++GVVNVGGIRIGG++GIY Y GH+EAPPY+ + RS YH+R +V+++ QL +DIMMSHDWPRG+ GN LL +KS+FR EIE NTLGSPPAE+LL LKPAYWFS HLH KF A ++H+ +G ET +FLALDKCLP R+FLQ++ +PR P+ L+YD EWLA+++ T+HL S+ R + +P++ V+ EE+ V+K F+ +VP NF
Sbjct: 1 MKIAVEGCAHGALEEIYGTLQYLEQQEGIQVELLLCCGDFQAVRNADDLECMAVPKKFRFMESFHKYYSGEKKAPYLTIFIGGNHEASNYLAELPYGGWVAPNIYYLGYAGVVNVGGIRIGGVSGIYKSHDYRKGHYEAPPYNENNKRSAYHIRSLEVFRMKQLKRPIDIMMSHDWPRGVYHCGNTKELLAKKSFFRNEIETNTLGSPPAEELLRALKPAYWFSGHLHCKFVAAIEHEKEGQETPKVTKFLALDKCLPRRDFLQVIDVPR--NEFEPLELQYDAEWLAVLQGTNHLFSTSRVPMNMPSQFTDDRWDYSVSSEEMEGVKKAFNGDLKVPENF 339 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|165483 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_9311 ID=mRNA_9311|Name=jgi.p|Trimin1|165483|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1119bp|location=Sequence derived from alignment at Contig_38:490667..494862- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGCTGAACGTGGTGGTGGAGGGCTGCAGCCATGGTGAGCTGGATCCTATback to top protein sequence of jgi.p|Trimin1|165483 >Trimin1|165483|e_gw1.38.79.1 ID=Trimin1|165483|e_gw1.38.79.1|Name=jgi.p|Trimin1|165483|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=373bp MLNVVVEGCSHGELDPIYASVARIEEAASIKVDLLLCCGDFQSLRDAGDFback to top mRNA from alignment at Contig_38:490667..494862- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_9311 ID=mRNA_9311|Name=jgi.p|Trimin1|165483|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=4196bp|location=Sequence derived from alignment at Contig_38:490667..494862- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_38:490667..494862- >mRNA_9311 ID=mRNA_9311|Name=jgi.p|Trimin1|165483|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1119bp|location=Sequence derived from alignment at Contig_38:490667..494862- (Tribonema minus UTEX_B_3156 )back to top |