mRNA_9262 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|165492
Unique NamemRNA_9262
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
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BLAST of jgi.p|Trimin1|165492 vs. uniprot
Match: A0A836CDX3_9STRA (Conserved oligomeric Golgi complex subunit 5 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDX3_9STRA)

HSP 1 Score: 563 bits (1450), Expect = 4.720e-202
Identity = 301/301 (100.00%), Postives = 301/301 (100.00%), Query Frame = 1 
Query:    1 MLVALAPVRDQYLLESLARLTKPVEQMFLHHDGYMAAVPSKHDLASFVKAMQAEAAVATDAVGGHVSLAPLVMRGAAKAVKLFCSKVSRLLASRSVRDRANWAKTADQTHNMQLLTLITQLRTAVVQLPSIVKPGKPAQKGLDPEEVTQCAQEASTHVDAALKAIDALATGQILRPYLSAAAYALERVMGTMHKDSFANLEGGSAEQTSGASAYMLDLQRAVGLVQSEHLKTVAALNAPYAQEMLRCLTDRLVRSFVSHAALVRPMEEAGKLKMARDMAMLEMCLSGIAPVATLGASYAEL 903
            MLVALAPVRDQYLLESLARLTKPVEQMFLHHDGYMAAVPSKHDLASFVKAMQAEAAVATDAVGGHVSLAPLVMRGAAKAVKLFCSKVSRLLASRSVRDRANWAKTADQTHNMQLLTLITQLRTAVVQLPSIVKPGKPAQKGLDPEEVTQCAQEASTHVDAALKAIDALATGQILRPYLSAAAYALERVMGTMHKDSFANLEGGSAEQTSGASAYMLDLQRAVGLVQSEHLKTVAALNAPYAQEMLRCLTDRLVRSFVSHAALVRPMEEAGKLKMARDMAMLEMCLSGIAPVATLGASYAEL
Sbjct:    1 MLVALAPVRDQYLLESLARLTKPVEQMFLHHDGYMAAVPSKHDLASFVKAMQAEAAVATDAVGGHVSLAPLVMRGAAKAVKLFCSKVSRLLASRSVRDRANWAKTADQTHNMQLLTLITQLRTAVVQLPSIVKPGKPAQKGLDPEEVTQCAQEASTHVDAALKAIDALATGQILRPYLSAAAYALERVMGTMHKDSFANLEGGSAEQTSGASAYMLDLQRAVGLVQSEHLKTVAALNAPYAQEMLRCLTDRLVRSFVSHAALVRPMEEAGKLKMARDMAMLEMCLSGIAPVATLGASYAEL 301
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BLAST of jgi.p|Trimin1|165492 vs. uniprot
Match: D8LSN2_ECTSI (Conserved oligomeric Golgi complex subunit 5 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSN2_ECTSI)

HSP 1 Score: 181 bits (460), Expect = 7.750e-48
Identity = 134/377 (35.54%), Postives = 187/377 (49.60%), Query Frame = 1 
Query:    1 MLVALAPVRDQYLLESLARLTKPVEQMFLHHDGYMAAVPSKHDLASFVKAMQAEAAVATDA--VGGHV---------------------------SLAPLVMRGAAKAVKLFCSKVSRLLASRSVRDRAN------------------------------------------WAKTADQTHNMQLLTLITQLRTAVVQLPSIVKPGKPAQKGLDPEEVTQCAQEASTHVDAALKAIDALATGQILRPYLSAAAYALERVMGTMHKDSFANLEGGSAEQTS------GASAYMLDLQRAVGLVQSEHLKTVAALNAPYAQEMLRCLTDRLVRSFVSHAALVRPMEEAGKLKMARDMAMLEMCLSGIAPVATLGASYAE 900
            +L AL P+RD +L  SL RLT PVEQMF   DGYMAAVPSKHDLASF +++ AE ++A  A  VG                              SL P++++G  +A +LFC+KV    A +SV   A                                           WA T +Q HN+QLL L+ +LR A++ +P++V P  P               E    V  A++A+D LA+   L PYLS  A A       MH+++F    G SA   S        S ++ +LQRA+  +Q++H   +AAL  P A+  LR L  R++R++V+H AL+RP+ E GK +MA+DMA LE+ LS +A V+ LGA Y E
Sbjct:  637 LLEALGPLRDLFLARSLERLTTPVEQMFPQFDGYMAAVPSKHDLASFFRSIHAELSLAVPAGSVGSAAATGSXXXXXXXXXXXXXXXXXSLEADFSLLPILLKGVVQAARLFCTKVE---AMQSVEKGAYTFGGGSNAALGXXXXXXXXXXXXXXXXXXXXXXXXXXAPMEAWAPTLEQEHNLQLLELVVKLREALLGIPALVLPSPPT------PAAAAYGVECRERVAKAVRALDDLASRVFLEPYLSGVARAXXXXXSKMHRENFG--PGVSAMAASEHXXXXXXSLFLHELQRALAALQADHFTRIAALRTPSAEAALRSLAARVLRAYVTHCALIRPLSEGGKARMAQDMATLEIALSPLARVSELGAVYLE 1002
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BLAST of jgi.p|Trimin1|165492 vs. uniprot
Match: A0A7S2B2D8_9STRA (Conserved oligomeric Golgi complex subunit 5 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B2D8_9STRA)

HSP 1 Score: 159 bits (403), Expect = 2.190e-41
Identity = 115/307 (37.46%), Postives = 171/307 (55.70%), Query Frame = 1 
Query:    1 MLVALAPVRDQYLLESLARLTKPVEQMFLHHDGYMAAVPSKHDLASFVKAMQAEAAVATDAVGGHVSLAPLVMRGAAKAVKLFCSKVSRLLASRSVR----DRANWAKTADQTHNMQLLTLITQLRTAVVQLPSIVKPGKPAQKGLDPEEVTQCAQEASTHVDAALKAIDALATGQILRPYLSAAAYALERVMGTMHKDSFANLEGGSAE-QTSGASAYMLDLQRAVGLVQSEHLKTVAA-LNAPYAQEMLRCLTDRLVRSFVSHAALVRPMEEAGKLKMARDMAMLEMCLSGIAPVATLGASYAEL 903
            +L AL P+R +++ +SL  L +PVEQMF + +GY  A+PSKHD+ S ++ + AE A ATD     +SL PL++R   KAV+   +KV  ++ + +      D+     T +Q HNMQLL  I  L + +  +   V  G      ++P+E      E    +  A+ A+++LA  QILRP +S  A  LE+ +  +H D+F   EG  +E    G S ++ D   A+ +++ EHL  +          E LR L  RL RSFVS+ ALVRP+ EAG+L++ARDMA  EM LS    +  LG S+ EL
Sbjct:  101 LLSALVPMRQRFMAKSLEALMRPVEQMFPNVEGYSNAIPSKHDVQSLMRIVDAELARATD----ELSLMPLILRNLVKAVRFLSTKVEGMVYTSTSALVYGDKMTSQLTVEQDHNMQLLEFIVNLTSQLKGIVGAVLKGA----NVEPQEGDMKRFELC--ISPAVSALESLAKHQILRPAMSGMATTLEKHLAKVHDDNFG--EGQPSEVPEDGTSKFLSDFDAALQVLRREHLSRLPRDTTTGVVGESLRDLARRLARSFVSNIALVRPLSEAGRLRLARDMAAFEMYLSSFYNLKGLGRSHEEL 395
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BLAST of jgi.p|Trimin1|165492 vs. uniprot
Match: I2CR59_NANGC (Conserved oligomeric Golgi complex subunit 5 (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CR59_NANGC)

HSP 1 Score: 152 bits (385), Expect = 1.490e-40
Identity = 112/307 (36.48%), Postives = 161/307 (52.44%), Query Frame = 1 
Query:   10 ALAPVRDQYLLESLARLTKPVEQMFLHHDGYMAAVPSKHDLASFVKAMQAEAAVATDAVGGHVSLAPLVMRGAAKAVKLFCSKVSRLL----ASRSVRDRANWAKTADQTHNMQLLTLITQLRTAVVQLPSIVKPGKPAQKGLDPEEVTQCAQEASTHVDAALKAIDALATGQILRPYLSAAAYALERVMGTMHKDSFANL----EGGSAEQTSGASAYMLDLQRAVGLVQSEHLKTVAALNAPYAQEMLRCLTDRLVRSFVSHAALVRPMEEAGKLKMARDMAMLEMCLSGIAP-VATLGASYAEL 903
            AL  +RD YL +SL RL +P+EQMF   +GY AA+PSKHDL + ++ MQ E  V+  A GG + L P V++G  KAV LFC+K+  ++     +R +     W    ++ HN+QLL L+  L   + +LP  + P              +     +  V  A+ A++ LA   ++ PY+   A  L   +  MH  ++A L    E G   QT   S ++   Q AV  ++  HL     L   +     + L  RL+R +VSHAALVRP+ EAGK K+  DMAMLE  L  + P +A LGA Y EL
Sbjct:   30 ALRSLRDLYLGQSLQRLCRPIEQMFPSQEGYQAAIPSKHDLQALLRVMQTEV-VSALAEGGPLLL-PHVLQGMVKAVYLFCAKIEAMINTGEGARKLYPLRGWMLGYEKEHNLQLLQLVALLHHGLQRLPQELAPA------------FRVGVSCTKAVAEAVGALETLAVVNLVHPYMVDIATELGGTLAEMHLKNYAPLPQEQEQGDKGQTMN-SRFISTFQAAVEALRKHHLSRFP-LQCEFVSRAFKALAGRLLRLYVSHAALVRPLNEAGKAKITNDMAMLETALYSLHPKLAELGAPYLEL 320
[Close]
BLAST of jgi.p|Trimin1|165492 vs. uniprot
Match: W7U1N2_9STRA (Conserved oligomeric Golgi complex subunit 5 n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7U1N2_9STRA)

HSP 1 Score: 154 bits (388), Expect = 2.950e-38
Identity = 112/307 (36.48%), Postives = 162/307 (52.77%), Query Frame = 1 
Query:   10 ALAPVRDQYLLESLARLTKPVEQMFLHHDGYMAAVPSKHDLASFVKAMQAEAAVATDAVGGHVSLAPLVMRGAAKAVKLFCSKVSRLL----ASRSVRDRANWAKTADQTHNMQLLTLITQLRTAVVQLPSIVKPGKPAQKGLDPEEVTQCAQEASTHVDAALKAIDALATGQILRPYLSAAAYALERVMGTMHKDSFANL----EGGSAEQTSGASAYMLDLQRAVGLVQSEHLKTVAALNAPYAQEMLRCLTDRLVRSFVSHAALVRPMEEAGKLKMARDMAMLEMCLSGIAP-VATLGASYAEL 903
            AL  +RD YL +SL RL +P+EQMF   +GY AA+PSKHDL + ++ MQ E  V+  A GG + L P V++G  KAV LFC+K+  ++     +R +     W    ++ HN+QLL L+  L   + +LP  + P              +     +  V  A+ A++ LA   ++ PY+   A  L   +  MH +++A L    E G   QT   S ++   Q AV  ++  HL     L   +     + L  RL+R +VSHAALVRP+ EAGK K+  DMAMLE  L  + P +A LGA Y EL
Sbjct:  618 ALRSLRDLYLGQSLQRLCRPIEQMFPSQEGYQAAIPSKHDLQALLRVMQTEV-VSALAEGGPLLL-PHVLQGMVKAVYLFCAKIEAMINTGEGARKLYPLRGWMLGYEKEHNLQLLQLVALLHHGLQRLPQELAPA------------FRVGVSCTKAVAEAVGALETLAVVNLVHPYMVDIATELGGTLAEMHLENYAPLPQEQEQGDKGQTMN-SRFISTFQAAVEALRKHHLSRFP-LQCEFVSRAFKALAGRLLRLYVSHAALVRPLNEAGKAKITNDMAMLETALYSLHPKLAELGAPYLEL 908
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BLAST of jgi.p|Trimin1|165492 vs. uniprot
Match: K3X4E8_GLOUD (Conserved oligomeric Golgi complex subunit 5 n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X4E8_GLOUD)

HSP 1 Score: 117 bits (293), Expect = 1.090e-25
Identity = 91/311 (29.26%), Postives = 146/311 (46.95%), Query Frame = 1 
Query:    1 MLVALAPVRDQYLLESLARLTKPVEQMFLHHDGYMAAVPSKHDLASFVKAMQAEAAVATDAVGGHVSLAPLVMRGAAKAVKLFCSKVSRLL--ASRSVRDRANWAKTADQTHNMQLLTLITQLRTAVVQLPSIVKPGKPAQKGLDPEEVTQCAQEASTHVDAALKAIDALATGQILRP--------YLSAAAYALERVMGTMHKDSFANLEGGSAEQTSGASAYMLDLQRAVGLVQSEHLKTVAALNAPYAQEMLRCLTDRLVRSFVSHAALVRPMEEAGKLKMARDMAMLEMCLSGIAPVATLGASYAEL 903
            +L ++AP+ D +   +  R+  P+  MF     +  + P + D+ +  + M +E     D  G    L    ++   KAV LFC  V R++     +V   + + +T  Q HN+ LL ++ QL  A+  + S V     A  G       Q     S     AL A +      +++         YL      +E +   MH +SFA+       Q SG S YM++   A  ++  EH++ +   NAP+A   +     RL+  F+ HA+L+RP++E GKL++A DMA LE+ L  I P+ TLGA Y EL
Sbjct:  477 LLESMAPLYDAFTDRAYRRMANPIHLMFPQSSNFHTSPPGRSDMQTLARTMLSE----VDQAGHDPMLIDGALQQIQKAVTLFCGNVKRIMNTGKAAVATTSTYGRTPAQAHNVSLLNVLKQLEDALDDVVSRVT----AAVGSSTSNQKQIGAAFSQKELEALLAKEIAPCRDVIQTLEYSVLGYYLQGLCMLMEGIFAKMHDESFADRSVSERAQNSG-SKYMIEFNGAFHVLLEEHIRRLP--NAPFAAICVSDFVARLISVFIRHASLLRPLQENGKLRLANDMAQLELRLEHILPLKTLGAPYEEL 776
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BLAST of jgi.p|Trimin1|165492 vs. uniprot
Match: A0A8K1C6A0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C6A0_PYTOL)

HSP 1 Score: 116 bits (290), Expect = 2.690e-25
Identity = 95/324 (29.32%), Postives = 154/324 (47.53%), Query Frame = 1 
Query:    1 MLVALAPVRDQYLLESLARLTKPVEQMFLHHDGYMAAVPSKHDLASFVKAMQAEAAVATDAVGGHVSLAPLVMRGAAKAVKLFCSKVSRLL--ASRSVRDRANWAKTADQTHNMQLLTLITQLRTAVVQLPSIVKPGKPAQKGLDPEEVTQCAQEASTHVDAALKAIDALATGQ-----------ILRPYLSAAAYALERVMGTMHKDSFAN------LEGGSAE----QTSGASAYMLDLQRAVGLVQSEHLKTVAALNAPYAQEMLRCLTDRLVRSFVSHAALVRPMEEAGKLKMARDMAMLEMCLSGIAPVATLGASYAEL 903
            +L A+ P+ D ++     R+  P+E MF     +  + PS+ D+ +  + + AE     + VG    L   V +   KAV LFC+   ++L     +V     + +TA+Q HN+ LL+ + QL   + QL + +  G  A+      + +     +ST +   +KA+                  IL PYL A A  LE +   MH +SFA+        G +A       +G S YM +      ++  EH++ + ++  P     +     RL+  F+ HAALVRP+EE GKL++A DMA LE+ L  + P+ +LGA Y EL
Sbjct:  455 LLDAMTPLADAFIERCYRRIASPIELMFPQSANFHTSPPSRSDMQTLARTIFAE----MELVGHDAVLIERVSQQIHKAVHLFCTTSKKILNTGKAAVALMPTYGRTANQAHNIALLSALYQLDDMITQLEARL--GSTARGNA---QTSTKLVPSSTQLQKQIKALQEKEFAPCHEQIQELQYTILGPYLQALAGVLESIFAKMHDESFADQTTSRDARGANAPIPATNPTGGSRYMSEFSSVFNVIIEEHIRRMPSV--PCVTTSVSAFIARLMSVFIRHAALVRPLEENGKLRLANDMAQLELRLESVLPLRSLGAPYDEL 767
[Close]
BLAST of jgi.p|Trimin1|165492 vs. uniprot
Match: A0A2D4BME8_PYTIN (Conserved oligomeric Golgi complex subunit 5 n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BME8_PYTIN)

HSP 1 Score: 115 bits (288), Expect = 4.900e-25
Identity = 92/328 (28.05%), Postives = 155/328 (47.26%), Query Frame = 1 
Query:    1 MLVALAPVRDQYLLESLARLTKPVEQMFLHHDGYMAAVPSKHDLASFVKAMQAEAAVATDAVGGHVSLAPLVMRGAAKAVKLFCSKVSRLL--ASRSVRDRANWAKTADQTHNMQLLTLITQLRTAV----VQLPSIVKP---------GKPAQKGLDPEEVTQCAQEASTHVDAALKAIDALATGQILRPYLSAAAYALERVMGTMHKDSFANLE------------GGSAEQTSGASAYMLDLQRAVGLVQSEHLKTVAALNAPYAQEMLRCLTDRLVRSFVSHAALVRPMEEAGKLKMARDMAMLEMCLSGIAPVATLGASYAEL 903
            +L A+AP+ D ++  S  R++ P++ MF     +  + PS+ D+ +  +    E     D VG    L   ++    KAV LFC    +++     +    A + ++A Q HN+ LL+ + Q+   V     +L S+             + + K +   E+T C ++        ++A++ L  GQ    YL A A   ER+   MH++SFA+              G  +  TS  S YM +   A G    EH++ + +   P     ++    R+V  F+ HA+L+RP+EE GKL++A DMA LE+ L  + P+ +LGA Y EL
Sbjct:  449 LLDAMAPLADAFMERSFRRISNPIQMMFPQSSNFHTSPPSRSDMQTLARTFFGE----LDQVGSDPVLIDRMILQVHKAVDLFCVNAKKIMNTGQAATAVTATYGRSAGQAHNVALLSALHQMDEMVGEIAARLASLASQQPTSSRSTGAQQSIKAVSERELTPCREQ--------IQALEFLILGQ----YLRALAQLTERIFAKMHEESFADRSRDNRPXGSSTPPGSVSRGTSSGSKYMTEFTGAFG----EHIRRLPS--TPVVTTCVQDFISRIVSVFIRHASLLRPLEENGKLRLANDMAQLELRLESVLPLRSLGACYEEL 754
[Close]
BLAST of jgi.p|Trimin1|165492 vs. uniprot
Match: A0A5D6XQT0_9STRA (Conserved oligomeric Golgi complex subunit 5 n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XQT0_9STRA)

HSP 1 Score: 113 bits (283), Expect = 2.620e-24
Identity = 99/324 (30.56%), Postives = 152/324 (46.91%), Query Frame = 1 
Query:    1 MLVALAPVRDQYLLESLARLTKPVEQMFLHHDGYMAAVPSKHDLASFVKAMQAEAAVATDAVGGHVSLAPLVMRGAAKAVKLFCSKVSRLL--ASRSVRDRANWAKTADQTHNMQLLTLITQLRTAVVQLPS-IVKPGKPAQKGLDPEEVTQ--CAQEASTHVDAALKAIDALATG---QILRPYLSAAAYALERVMGTMHKDSFANLEGGSAEQT------------SGASAYMLDLQRAVGLVQSEHLKTVAALNAPYAQEMLRCLTD---RLVRSFVSHAALVRPMEEAGKLKMARDMAMLEMCLSGIAPVATLGASYAEL 903
            +L A+AP+ D +   +  RL  P++ MF     +  + P + D+ +  + + +E     D  G    L    ++   +AV LFC+ V R+      +        +T  Q HN+ LL ++ QL  A+  + + +      A+      +V Q  CAQE        L+    L  G    IL  YL      LE +   MH +SFA+L   SA  T            SG S YM +   A  +V  EH++ +     P A+   RC++D   RL+  F+ HAAL+RP+EE+GKL++A DMA LE+ L  + P+  LGA Y EL
Sbjct: 1425 LLDAMAPLFDAFTDRTYRRLANPIQLMFPQSASFHTSPPGRSDMQTLARTVFSE----VDQAGQDPVLLAGALQQIRRAVTLFCANVKRITNTGKAATSTTPTLGRTPAQAHNVSLLNVLHQLDEALSDVAARVASAAGAAESDAAALQVLQALCAQE--------LQPCRELIQGLEYTILGTYLQGLCAILESIFAKMHDESFADLPPVSASSTGATAAATGASAKSGGSRYMAEFNGAFHVVLDEHIRRL-----PNARFAGRCVSDFVARLISVFLRHAALLRPLEESGKLRLANDMAQLELRLEQLLPLKALGAPYDEL 1731
[Close]
BLAST of jgi.p|Trimin1|165492 vs. uniprot
Match: A0A0W8DBL2_PHYNI (Conserved oligomeric Golgi complex subunit 5 n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8DBL2_PHYNI)

HSP 1 Score: 108 bits (270), Expect = 1.000e-22
Identity = 88/335 (26.27%), Postives = 157/335 (46.87%), Query Frame = 1 
Query:    1 MLVALAPVRDQYLLESLARLTKPVEQMFLHHDGYMAAVPSKHDLASFVKAMQAEAAVATDAVGGHVSLAPLVMRGAAKAVKLFCSKVSRLL--ASRSVRDRANWAKTADQTHNMQLLTLITQLRTAVVQLPSIVKPGKPAQKGLDPEEVTQCAQEASTHVDAALKAIDA--LATGQI--------------LRPYLSAAAYALERVMGTMHKDSFANLE----------------GGSAEQTSGASAYMLDLQRAVGLVQSEHLKTVAALNAPYAQEMLRCLTDRLVRSFVSHAALVRPMEEAGKLKMARDMAMLEMCLSGIAPVATLGASYAEL 903
            +L ++AP+ D ++  +  R++ P++ MF     + A+ P + D+ +  + + +E     +  G  + L    ++   KAV LFCS V R++     +    +++ +T  Q HN+ L+ +++ L  AV ++ + ++    A  G      T  +  A       + + +A  L T  +              L  YL A A  LE +   MH +SF +                  GG + Q +  S YM +   A  ++  EHL+ +    A +A + L    +RL+  F+ HA+L+RP+ E GKL++A DMA LE+ L  I P+  +GA+Y EL
Sbjct:  187 LLDSMAPLYDAFIDRAYRRMSNPIQLMFPQSSNFHASPPGRSDMQTLSRTIFSE----LEHAGQDLVLLDGTLQQVRKAVNLFCSNVKRIMHQGKAAAATMSSFGRTPAQAHNVGLMNVLSLLDDAVEEVMNRIETAA-APNGTQTGTSTHMSSAADPVATGVMSSKEAKELCTKNLSPCREMIGDLKYALLGFYLQALAVLLESIFAKMHDESFGDQSATARVATSGGAPRSSGGGRSSQGTSGSKYMQEFSNAFTIILEEHLRRLPI--AVFATKCLADFVERLISVFIRHASLLRPLTENGKLRLANDMAQLELRLEHIVPLRNIGAAYEEL 514
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|165492 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CDX3_9STRA4.720e-202100.00Conserved oligomeric Golgi complex subunit 5 n=1 T... [more]
D8LSN2_ECTSI7.750e-4835.54Conserved oligomeric Golgi complex subunit 5 n=2 T... [more]
A0A7S2B2D8_9STRA2.190e-4137.46Conserved oligomeric Golgi complex subunit 5 n=1 T... [more]
I2CR59_NANGC1.490e-4036.48Conserved oligomeric Golgi complex subunit 5 (Frag... [more]
W7U1N2_9STRA2.950e-3836.48Conserved oligomeric Golgi complex subunit 5 n=3 T... [more]
K3X4E8_GLOUD1.090e-2529.26Conserved oligomeric Golgi complex subunit 5 n=1 T... [more]
A0A8K1C6A0_PYTOL2.690e-2529.32Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A2D4BME8_PYTIN4.900e-2528.05Conserved oligomeric Golgi complex subunit 5 n=1 T... [more]
A0A5D6XQT0_9STRA2.620e-2430.56Conserved oligomeric Golgi complex subunit 5 n=1 T... [more]
A0A0W8DBL2_PHYNI1.000e-2226.27Conserved oligomeric Golgi complex subunit 5 n=1 T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_38contigContig_38:80983..83307 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|165492|e_gw1.38.145.1
BRITEko00000,ko04131
KEGG koko:K20292
GOsGO:0000003,GO:0000139,GO:0000212,GO:0000226,GO:0000280,GO:0000910,GO:0000916,GO:0001675,GO:0003006,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005783,GO:0005794,GO:0005802,GO:0006810,GO:0006888,GO:0006891,GO:0006996,GO:0006997,GO:0007010,GO:0007017,GO:0007049,GO:0007051,GO:0007110,GO:0007111,GO:0007112,GO:0007140,GO:0007276,GO:0007281,GO:0007283,GO:0007286,GO:0007289,GO:0007290,GO:0008150,GO:0009653,GO:0009987,GO:0010256,GO:0010927,GO:0012505,GO:0016020,GO:0016043,GO:0016050,GO:0016192,GO:0017119,GO:0019953,GO:0022402,GO:0022412,GO:0022414,GO:0022607,GO:0030029,GO:0030036,GO:0030154,GO:0030865,GO:0030866,GO:0031032,GO:0031090,GO:0031974,GO:0031981,GO:0031984,GO:0032501,GO:0032502,GO:0032504,GO:0032506,GO:0032588,GO:0032989,GO:0032991,GO:0033206,GO:0033363,GO:0036213,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044085,GO:0044422,GO:0044424,GO:0044428,GO:0044431,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0044837,GO:0046907,GO:0048193,GO:0048219,GO:0048232,GO:0048285,GO:0048468,GO:0048515,GO:0048609,GO:0048646,GO:0048856,GO:0048869,GO:0051179,GO:0051234,GO:0051301,GO:0051321,GO:0051641,GO:0051649,GO:0051704,GO:0061024,GO:0061640,GO:0061982,GO:0061983,GO:0070013,GO:0070925,GO:0070971,GO:0071840,GO:0098588,GO:0098791,GO:0099023,GO:0140013,GO:1903046
Preferred nameCOG5
Descriptionintra-Golgi vesicle-mediated transport
COG categoryJ
Max annot lvl2759|Eukaryota
EggNOG OGsKOG2211@1|root,KOG2211@2759|Eukaryota
Evalue1.27e-48
Seed ortholog2880.D8LSN2
Hectar predicted targeting categoryother localisation
TranscriptId165814
TrackFilteredModels1
ProteinId165492
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|165492gene_9262Tribonema minus UTEX_B_3156 geneContig_38 80983..83307 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|165492Trimin1|165492|e_gw1.38.145.1Tribonema minus UTEX_B_3156 polypeptideContig_38 80983..83307 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_9262_3exon_9262_3Tribonema minus UTEX_B_3156 exonContig_38 80983..81066 -
exon_9262_2exon_9262_2Tribonema minus UTEX_B_3156 exonContig_38 81580..82109 -
exon_9262_1exon_9262_1Tribonema minus UTEX_B_3156 exonContig_38 83019..83307 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_9262CDS_9262Tribonema minus UTEX_B_3156 CDSContig_38 83019..83307 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_9262 ID=mRNA_9262|Name=jgi.p|Trimin1|165492|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=903bp|location=Sequence derived from alignment at Contig_38:80983..83307- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGCTGGTAGCCCTCGCCCCTGTTCGTGATCAGTACTTGTTGGAAAGCCT
GGCCCGACTCACAAAGCCCGTAGAGCAGATGTTCTTGCACCACGATGGCT
ACATGGCAGCAGTGCCCAGCAAACACGACCTCGCTAGCTTCGTCAAGGCC
ATGCAGGCGGAGGCGGCGGTGGCTACAGATGCAGTGGGTGGGCATGTGTC
TCTGGCTCCACTGGTCATGAGGGGGGCCGCAAAGGCGGTCAAGCTCTTCT
GCAGCAAGGTGAGCAGACTCCTTGCTTCGAGAAGCGTGCGCGATCGCGCT
AACTGGGCCAAGACCGCCGACCAGACCCACAACATGCAGCTGCTGACACT
CATCACACAGCTGCGCACGGCGGTGGTGCAGCTGCCTAGCATCGTCAAGC
CCGGCAAGCCTGCACAGAAAGGCTTGGACCCTGAGGAAGTGACGCAGTGC
GCCCAGGAGGCGAGCACCCATGTTGACGCTGCCCTGAAGGCCATTGACGC
ACTGGCTACGGGGCAGATACTGAGGCCCTACCTGTCGGCAGCAGCGTATG
CACTAGAGCGCGTGATGGGCACAATGCACAAGGACAGCTTTGCCAACCTG
GAAGGGGGATCAGCGGAGCAGACATCGGGGGCCAGTGCCTACATGCTGGA
CTTGCAGAGAGCGGTGGGTCTGGTGCAGTCGGAGCATCTGAAGACTGTGG
CAGCGCTCAACGCGCCGTATGCGCAGGAGATGCTGCGGTGTCTGACGGAC
CGCCTGGTGCGCAGCTTTGTGTCGCACGCCGCGCTGGTGCGGCCCATGGA
GGAGGCTGGCAAGCTCAAGATGGCACGTGACATGGCCATGCTGGAGATGT
GCCTGTCAGGCATAGCGCCTGTTGCTACGCTCGGCGCCTCCTACGCCGAA
CTG
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protein sequence of jgi.p|Trimin1|165492

>Trimin1|165492|e_gw1.38.145.1 ID=Trimin1|165492|e_gw1.38.145.1|Name=jgi.p|Trimin1|165492|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=301bp
MLVALAPVRDQYLLESLARLTKPVEQMFLHHDGYMAAVPSKHDLASFVKA
MQAEAAVATDAVGGHVSLAPLVMRGAAKAVKLFCSKVSRLLASRSVRDRA
NWAKTADQTHNMQLLTLITQLRTAVVQLPSIVKPGKPAQKGLDPEEVTQC
AQEASTHVDAALKAIDALATGQILRPYLSAAAYALERVMGTMHKDSFANL
EGGSAEQTSGASAYMLDLQRAVGLVQSEHLKTVAALNAPYAQEMLRCLTD
RLVRSFVSHAALVRPMEEAGKLKMARDMAMLEMCLSGIAPVATLGASYAE
L
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mRNA from alignment at Contig_38:80983..83307-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_9262 ID=mRNA_9262|Name=jgi.p|Trimin1|165492|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2325bp|location=Sequence derived from alignment at Contig_38:80983..83307- (Tribonema minus UTEX_B_3156 )
ATGCTGGTAGCCCTCGCCCCTGTTCGTGATCAGTACTTGTTGGAAAGCCT
GGCCCGACTCACAAAGCCCGTAGAGCAGATGTTCTTGCACCACGATGGCT
ACATGGCAGCAGTGCCCAGCAAACACGACCTCGCTAGCTTCGTCAAGGCC
ATGCAGGCGGAGGCGGCGGTGGCTACAGATGCAGTGGGTGGGCATGTGTC
TCTGGCTCCACTGGTCATGAGGGGGGCCGCAAAGGCGGTCAAGCTCTTCT
GCAGCAAGGTGAGCAGACTCCTTGCTTCGAGAAGCGTGCGTATTGCTGCT
GAATCCGTCATTGCGTTGCTGCTGAACAAGTTCATGATATTGGTTTGAGT
AACACACTGAAGTGTGTGACATGTGACAAGTAACATGAGGAGGTAATATC
TGCCAGTCATTTGAGCAGGATCATTCAGCTGGTTTGTGCTTGAGTTGTTG
TTGTGCTGCGGACTGTGAAGAAGTTACAGTGTGCTGGCGGACTGTGGAGC
ATTTTGCTGGCAAGCGACAATATTCGCATGTACTTCATATACTGGGATGC
CCCCTCTGAACATCAACTCATACAACTATCCTCATTGACGCTTCTCTTCA
GGCCGAAGGCATGTTGCGGAACAGCCCAGAGGCGTACAGCTTTGGCAGCG
GTACAACCAACAAGGCAGCGCAGCGTGATGGGAAGGATGGCAAAGATGCT
CAGCAGCTGCAACTACCGCTAGTTGACGCTCCAGGTGATTATATTGAAGT
TGGAGTTGAAGTTGACAGTGAAGCCAGTTCCGCGAGGTCCAGATCGCTGT
GCAGTACAATGCTAAACACACTTGTTGTACGTGTTCACCGGGCTTGAATG
CTTGTTCTTGAAGTTCATCTCATGGTTGAGACTTCGTAGCACATAACTTG
CCCTGCAGGCGCGTGAGTTGTATGTAGGCCTAGCGACCTTAACCATGTGC
GGATGCCTCTTGTGAGTGGAAAGGGGTCTGCCGCTTCCGCAAGCCCTGAT
CTGATCTGATGTACTTTGAAGTATGCAATGATGACTCCAGTGCATGGTCT
AAAGTTGACTTGTAACCATGTGTCACCTCTGACAAAACCATTCCTGACAG
CTTTGCTCCATGTAGTACAAGCGCCCTTGAAATGACGACATCCTGAACAA
AAGCATACGGTATGCATGCTGTTGCTCACCGCGCCACAGGCAATGCAGGC
GATCGCGCTAACTGGGCCAAGACCGCCGACCAGACCCACAACATGCAGCT
GCTGACACTCATCACACAGCTGCGCACGGCGGTGGTGCAGCTGCCTAGCA
TCGTCAAGCCCGGCAAGCCTGCACAGAAAGGCTTGGACCCTGAGGAAGTG
ACGCAGTGCGCCCAGGAGGCGAGCACCCATGTTGACGCTGCCCTGAAGGC
CATTGACGCACTGGCTACGGGGCAGATACTGAGGCCCTACCTGTCGGCAG
CAGCGTATGCACTAGAGCGCGTGATGGGCACAATGCACAAGGACAGCTTT
GCCAACCTGGAAGGGGGATCAGCGGAGCAGACATCGGGGGCCAGTGCCTA
CATGCTGGACTTGCAGAGAGCGGTGGGTCTGGTGCAGTCGGAGCATCTGA
AGACTGTGGCAGCGCTCAACGCGCCGTATGCGCAGGAGATGCTGCGGTGT
CTGACGGACCGCCTGGTGCGCAGCTTTGTGTCGCACGCCGCGCTGGTGCG
GCCCATGGAGGAGGCTGGCAAGCTCAAGGTCAGTGGTGCAAGGTGTGCGT
TGAAGGACTGTTGTGAGGTTTGCGGAAAGTTCAGCAGCTTTGAGCGTGGA
GGCATGTGCTCACATCGGGTGAAGATCTACAACGCTTGGTAACACATCAG
CAATGCTCAAGTAGGAAACAGCATCGTTTATGGTGAACTTCACCACAACA
ACGGCCACCTCCTCGAAGTTAGGCGATCAAGTACAGCATGCTTGTTGAGC
CTTCAAATGTCAGCCTGAGTCGGGCGTGCCAAAGGCATGGCTATTTGATG
CCAATAGGCATGGCTATTTGATGCCAATTCTGTCCCCAGATCACTGCTCA
GCATTTTGTCCAGAGCACACGTGCAGAGCTGAGCTGAGCTATTGTATATG
TGCGTGCATTCGTGTACAATTTCTCATATACCTGTGGCTTGGCATGTCTC
TGACACTTTAGAGAGTTTTGCTCAAGTACTTCCAGCAGCATGACGGAACG
CTCACACCTTGTCCCATTGATGTGGCGTGTTCATGCTGCAGATGGCACGT
GACATGGCCATGCTGGAGATGTGCCTGTCAGGCATAGCGCCTGTTGCTAC
GCTCGGCGCCTCCTACGCCGAACTG
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Coding sequence (CDS) from alignment at Contig_38:80983..83307-

>mRNA_9262 ID=mRNA_9262|Name=jgi.p|Trimin1|165492|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=903bp|location=Sequence derived from alignment at Contig_38:80983..83307- (Tribonema minus UTEX_B_3156 )
ATGCTGGTAGCCCTCGCCCCTGTTCGTGATCAGTACTTGTTGGAAAGCCT
GGCCCGACTCACAAAGCCCGTAGAGCAGATGTTCTTGCACCACGATGGCT
ACATGGCAGCAGTGCCCAGCAAACACGACCTCGCTAGCTTCGTCAAGGCC
ATGCAGGCGGAGGCGGCGGTGGCTACAGATGCAGTGGGTGGGCATGTGTC
TCTGGCTCCACTGGTCATGAGGGGGGCCGCAAAGGCGGTCAAGCTCTTCT
GCAGCAAGGTGAGCAGACTCCTTGCTTCGAGAAGCGTGCGCGATCGCGCT
AACTGGGCCAAGACCGCCGACCAGACCCACAACATGCAGCTGCTGACACT
CATCACACAGCTGCGCACGGCGGTGGTGCAGCTGCCTAGCATCGTCAAGC
CCGGCAAGCCTGCACAGAAAGGCTTGGACCCTGAGGAAGTGACGCAGTGC
GCCCAGGAGGCGAGCACCCATGTTGACGCTGCCCTGAAGGCCATTGACGC
ACTGGCTACGGGGCAGATACTGAGGCCCTACCTGTCGGCAGCAGCGTATG
CACTAGAGCGCGTGATGGGCACAATGCACAAGGACAGCTTTGCCAACCTG
GAAGGGGGATCAGCGGAGCAGACATCGGGGGCCAGTGCCTACATGCTGGA
CTTGCAGAGAGCGGTGGGTCTGGTGCAGTCGGAGCATCTGAAGACTGTGG
CAGCGCTCAACGCGCCGTATGCGCAGGAGATGCTGCGGTGTCTGACGGAC
CGCCTGGTGCGCAGCTTTGTGTCGCACGCCGCGCTGGTGCGGCCCATGGA
GGAGGCTGGCAAGCTCAAGATGGCACGTGACATGGCCATGCTGGAGATGT
GCCTGTCAGGCATAGCGCCTGTTGCTACGCTCGGCGCCTCCTACGCCGAA
CTG
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