mRNA_9170 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|349205
Unique NamemRNA_9170
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
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BLAST of jgi.p|Trimin1|349205 vs. uniprot
Match: A0A836CDA8_9STRA (Pyridoxal kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDA8_9STRA)

HSP 1 Score: 422 bits (1084), Expect = 6.600e-149
Identity = 215/215 (100.00%), Postives = 215/215 (100.00%), Query Frame = 2 
Query:   38 MLSCLSRRVAPIASLAARSSMHTSNTMRNASPLVMHSSPLRSEHAKAFQATLPEREGRVLSVQSHTVHGYVGNKAATLPLQLLGLEVDPLNTVHFSTHAGYKHLRGDATTAQQFDTLVEGLKINGVFNYDYVLSGYARSEGLLMSLASIVTELRATNGSKDKHAVRYFLDPVLGDDDCGFYVPQELVATYRDAMLPLATVITPNTFEAQQLRRSS 682
            MLSCLSRRVAPIASLAARSSMHTSNTMRNASPLVMHSSPLRSEHAKAFQATLPEREGRVLSVQSHTVHGYVGNKAATLPLQLLGLEVDPLNTVHFSTHAGYKHLRGDATTAQQFDTLVEGLKINGVFNYDYVLSGYARSEGLLMSLASIVTELRATNGSKDKHAVRYFLDPVLGDDDCGFYVPQELVATYRDAMLPLATVITPNTFEAQQLRRSS
Sbjct:    1 MLSCLSRRVAPIASLAARSSMHTSNTMRNASPLVMHSSPLRSEHAKAFQATLPEREGRVLSVQSHTVHGYVGNKAATLPLQLLGLEVDPLNTVHFSTHAGYKHLRGDATTAQQFDTLVEGLKINGVFNYDYVLSGYARSEGLLMSLASIVTELRATNGSKDKHAVRYFLDPVLGDDDCGFYVPQELVATYRDAMLPLATVITPNTFEAQQLRRSS 215
[Close]
BLAST of jgi.p|Trimin1|349205 vs. uniprot
Match: A0A1D5PVA2_CHICK (Pyridoxal kinase n=3 Tax=Aves TaxID=8782 RepID=A0A1D5PVA2_CHICK)

HSP 1 Score: 162 bits (409), Expect = 7.920e-47
Identity = 83/162 (51.23%), Postives = 106/162 (65.43%), Query Frame = 2 
Query:  194 PEREGRVLSVQSHTVHGYVGNKAATLPLQLLGLEVDPLNTVHFSTHAGYKHLRGDATTAQQFDTLVEGLKINGVFNYDYVLSGYARSEGLLMSLASIVTELRATNGSKDKHAVRYFLDPVLGDDDCG---FYVPQELVATYRDAMLPLATVITPNTFEAQQL 670
            PERE RVLS+QSH V GYVGNKAAT PLQ+LG EVD +N+V FS H GY H +G    + +   L EGLK+N V  YDYVL+GY R    L  +  IV EL+  N +     + Y  DPV+GD   G   +YVP++L+  YRD ++P+A +ITPN FEA+ L
Sbjct:    3 PERECRVLSIQSHVVRGYVGNKAATFPLQVLGFEVDTVNSVQFSNHTGYAHWKGQVLNSDELHELYEGLKLNKVNQYDYVLTGYTRDTSFLAMVVDIVQELKQQNSN-----LVYVCDPVMGDKWNGKAPWYVPKDLLPVYRDKVVPVADIITPNQFEAELL 159
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BLAST of jgi.p|Trimin1|349205 vs. uniprot
Match: A0A7S0E9S0_9EUKA (Pyridoxal kinase (Fragment) n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0E9S0_9EUKA)

HSP 1 Score: 161 bits (408), Expect = 2.390e-46
Identity = 84/156 (53.85%), Postives = 107/156 (68.59%), Query Frame = 2 
Query:  206 GRVLSVQSHTVHGYVGNKAATLPLQLLGLEVDPLNTVHFSTHAGYKHLRGDATTAQQFDTLVEGLKINGVFN-YDYVLSGYARSEGLLMSLASIVTELRATNGSKDKHAVRYFLDPVLGDDDCGFYVPQELVATYRDAMLPLATVITPNTFEAQQL 670
            GRVLS+QSHTVHGYVGNK+A  PLQLLG EVDP+N+V FSTH GY   RG+    QQ   LVEGL+ +G+   Y ++L+GY  S   L ++   V  +RA N       + Y+ DPV+GD+    YVP+ELV  YRD +LPLA+V+TPN FEA+QL
Sbjct:   38 GRVLSIQSHTVHGYVGNKSAVFPLQLLGFEVDPINSVQFSTHTGYPGWRGEVMQGQQLTELVEGLRSSGLLRGYSHMLTGYIGSASFLRAVLDTVRAVRAENPE-----MLYYCDPVMGDNG-SLYVPKELVDIYRDEVLPLASVLTPNQFEAEQL 187
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BLAST of jgi.p|Trimin1|349205 vs. uniprot
Match: UPI001261923F (pyridoxal kinase n=1 Tax=Mastomys coucha TaxID=35658 RepID=UPI001261923F)

HSP 1 Score: 159 bits (401), Expect = 6.290e-46
Identity = 81/159 (50.94%), Postives = 103/159 (64.78%), Query Frame = 2 
Query:  197 EREGRVLSVQSHTVHGYVGNKAATLPLQLLGLEVDPLNTVHFSTHAGYKHLRGDATTAQQFDTLVEGLKINGVFNYDYVLSGYARSEGLLMSLASIVTELRATNGSKDKHAVRYFLDPVLGDDDCG---FYVPQELVATYRDAMLPLATVITPNTFEAQ 664
            E E RVLS+QSH V GYVGN+ A  PLQ+LG EVD +N+V FS HAGY H +G   T+Q+   L EGLK N V  YDYVL+GY R +  L ++  IV EL+  N       + Y  DPV+GD   G    YVPQ+L+  YRD ++P+A +ITPN FEA+
Sbjct:    2 EGECRVLSIQSHVVRGYVGNRVAMFPLQVLGFEVDAVNSVQFSNHAGYAHWKGQVLTSQELHELYEGLKANSVNKYDYVLTGYTRDKSFLTTVVDIVQELKQQNSK-----LMYVCDPVMGDKWNGEGSMYVPQDLLPVYRDKVVPVADIITPNQFEAE 155
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BLAST of jgi.p|Trimin1|349205 vs. uniprot
Match: A0A7J5Y2F2_DISMA (Pyridoxal kinase n=2 Tax=Perciformes TaxID=8111 RepID=A0A7J5Y2F2_DISMA)

HSP 1 Score: 161 bits (408), Expect = 8.140e-46
Identity = 79/156 (50.64%), Postives = 105/156 (67.31%), Query Frame = 2 
Query:  203 EGRVLSVQSHTVHGYVGNKAATLPLQLLGLEVDPLNTVHFSTHAGYKHLRGDATTAQQFDTLVEGLKINGVFNYDYVLSGYARSEGLLMSLASIVTELRATNGSKDKHAVRYFLDPVLGDDDCGFYVPQELVATYRDAMLPLATVITPNTFEAQQL 670
            E RVLS+QSH V GYVGNK+AT PLQ+LG EVD +N+V FS H GY H +G   TA + + L EG+K+N V  YDY+L+GY+R    LM++  I+ EL+  N S     + Y  DPV+GD     YVP+ L+  YRD ++PLA ++TPN FEA+ L
Sbjct:    2 ECRVLSIQSHVVRGYVGNKSATFPLQVLGFEVDSINSVQFSNHTGYSHWKGQVLTADELNVLYEGIKLNKVNRYDYILTGYSRDTSFLMTVVDIIQELKKANPS-----LVYVCDPVMGDQGA-MYVPEYLLPVYRDNVVPLADILTPNQFEAELL 151
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BLAST of jgi.p|Trimin1|349205 vs. uniprot
Match: UPI000907003B (pyridoxal kinase n=1 Tax=Alligator mississippiensis TaxID=8496 RepID=UPI000907003B)

HSP 1 Score: 163 bits (413), Expect = 9.800e-46
Identity = 84/162 (51.85%), Postives = 107/162 (66.05%), Query Frame = 2 
Query:  194 PEREGRVLSVQSHTVHGYVGNKAATLPLQLLGLEVDPLNTVHFSTHAGYKHLRGDATTAQQFDTLVEGLKINGVFNYDYVLSGYARSEGLLMSLASIVTELRATNGSKDKHAVRYFLDPVLGDDDCG---FYVPQELVATYRDAMLPLATVITPNTFEAQQL 670
            PERE RVLS+QSH V GYVGNKAAT PLQ+LGLEVD +N+V FS H GY H +G    + +   L EGLK+N V +YDYVL+GY R    L  +  IV EL+  N +     + Y  DPV+GD   G    YVP++L+  YRD ++P+A +ITPN FEA+ L
Sbjct:    5 PERECRVLSIQSHVVRGYVGNKAATFPLQVLGLEVDTVNSVQFSNHTGYAHWKGQVLNSDELHELYEGLKLNNVNHYDYVLTGYTRDTSFLGMVVDIVKELKQQNSN-----LVYVCDPVMGDKWNGEGSMYVPKDLLPVYRDKVVPVADIITPNQFEAELL 161
[Close]
BLAST of jgi.p|Trimin1|349205 vs. uniprot
Match: A0A7K4LR80_9AVES (Pyridoxal kinase (Fragment) n=15 Tax=Aves TaxID=8782 RepID=A0A7K4LR80_9AVES)

HSP 1 Score: 163 bits (413), Expect = 1.110e-45
Identity = 86/170 (50.59%), Postives = 108/170 (63.53%), Query Frame = 2 
Query:  170 AKAFQATLPEREGRVLSVQSHTVHGYVGNKAATLPLQLLGLEVDPLNTVHFSTHAGYKHLRGDATTAQQFDTLVEGLKINGVFNYDYVLSGYARSEGLLMSLASIVTELRATNGSKDKHAVRYFLDPVLGDDDCG---FYVPQELVATYRDAMLPLATVITPNTFEAQQL 670
            A A  A  PERE RVLS+QSH V GYVGNKAAT PLQ+LG EVD +N+V FS H GY H +G    + +   L EGLK+N V  YDYVL+GY R    L  +  IV EL+  N +     + Y  DPV+GD   G    YVP++L+  YRD ++P+A +ITPN FEA+ L
Sbjct:    3 AAAAAAMEPERECRVLSIQSHVVRGYVGNKAATFPLQVLGFEVDTVNSVQFSNHTGYAHWKGQVLNSGELHELYEGLKLNNVNQYDYVLTGYTRDTSFLAMVVDIVQELKKQNSN-----LVYVCDPVMGDKWNGEGSMYVPKDLLPVYRDKVVPVADIITPNQFEAELL 167
[Close]
BLAST of jgi.p|Trimin1|349205 vs. uniprot
Match: A0A3Q2TUH0_CHICK (Pyridoxal kinase n=27 Tax=Neognathae TaxID=8825 RepID=A0A3Q2TUH0_CHICK)

HSP 1 Score: 162 bits (411), Expect = 1.810e-45
Identity = 82/161 (50.93%), Postives = 106/161 (65.84%), Query Frame = 2 
Query:  194 PEREGRVLSVQSHTVHGYVGNKAATLPLQLLGLEVDPLNTVHFSTHAGYKHLRGDATTAQQFDTLVEGLKINGVFNYDYVLSGYARSEGLLMSLASIVTELRATNGSKDKHAVRYFLDPVLGD--DDCGFYVPQELVATYRDAMLPLATVITPNTFEAQQL 670
            PERE RVLS+QSH V GYVGNKAAT PLQ+LG EVD +N+V FS H GY H +G    + +   L EGLK+N V  YDYVL+GY R    L  +  IV EL+  N +     + Y  DPV+GD  ++   YVP++L+  YRD ++P+A +ITPN FEA+ L
Sbjct:    3 PERECRVLSIQSHVVRGYVGNKAATFPLQVLGFEVDTVNSVQFSNHTGYAHWKGQVLNSDELHELYEGLKLNKVNQYDYVLTGYTRDTSFLAMVVDIVQELKQQNSN-----LVYVCDPVMGDKWNEGSMYVPKDLLPVYRDKVVPVADIITPNQFEAELL 158
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BLAST of jgi.p|Trimin1|349205 vs. uniprot
Match: A0A3Q2ZL42_HIPCM (Pyridoxal kinase n=2 Tax=Syngnathidae TaxID=72045 RepID=A0A3Q2ZL42_HIPCM)

HSP 1 Score: 162 bits (410), Expect = 2.480e-45
Identity = 80/156 (51.28%), Postives = 106/156 (67.95%), Query Frame = 2 
Query:  203 EGRVLSVQSHTVHGYVGNKAATLPLQLLGLEVDPLNTVHFSTHAGYKHLRGDATTAQQFDTLVEGLKINGVFNYDYVLSGYARSEGLLMSLASIVTELRATNGSKDKHAVRYFLDPVLGDDDCGFYVPQELVATYRDAMLPLATVITPNTFEAQQL 670
            E RVLS+QSH V GYVGNK+AT PLQ+LG EVD +N+V FS H GY H +G    A + + L EG+K+N V +YDY+L+GY+R    LM++  IV EL+  N S     + Y  DPV+GD     YVP+EL+  YRD ++PLA ++TPN FEA+ L
Sbjct:    5 ECRVLSIQSHVVRGYVGNKSATFPLQVLGFEVDSINSVQFSNHTGYAHWKGQVLKADELNVLYEGIKLNKVNHYDYILTGYSRDTSFLMTVVEIVKELKKANPS-----LVYVCDPVMGDHGA-MYVPEELLPVYRDKVVPLADILTPNQFEAELL 154
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BLAST of jgi.p|Trimin1|349205 vs. uniprot
Match: Q5U3M7_DANRE (Pyridoxal kinase n=6 Tax=Danio rerio TaxID=7955 RepID=Q5U3M7_DANRE)

HSP 1 Score: 162 bits (409), Expect = 2.930e-45
Identity = 81/154 (52.60%), Postives = 105/154 (68.18%), Query Frame = 2 
Query:  209 RVLSVQSHTVHGYVGNKAATLPLQLLGLEVDPLNTVHFSTHAGYKHLRGDATTAQQFDTLVEGLKINGVFNYDYVLSGYARSEGLLMSLASIVTELRATNGSKDKHAVRYFLDPVLGDDDCGFYVPQELVATYRDAMLPLATVITPNTFEAQQL 670
            RVLSVQSH V GYVGNK+AT PLQ+LG EVD +N+V FS H GY+H +G   TA + + L EG+K+N V +YDYVL+GY R +  L ++  IV EL+  N S     + Y  DPVLGD+    YVP+ L+  YRD ++P A +ITPN FEA+ L
Sbjct:    4 RVLSVQSHVVRGYVGNKSATFPLQVLGFEVDTINSVQFSNHTGYEHWKGQVLTADELNVLYEGIKLNNVNHYDYVLTGYTRDDSFLDTVVDIVQELKRANPS-----LVYVCDPVLGDNGA-MYVPENLLPIYRDRVVPAADIITPNQFEAELL 151
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|349205 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CDA8_9STRA6.600e-149100.00Pyridoxal kinase n=1 Tax=Tribonema minus TaxID=303... [more]
A0A1D5PVA2_CHICK7.920e-4751.23Pyridoxal kinase n=3 Tax=Aves TaxID=8782 RepID=A0A... [more]
A0A7S0E9S0_9EUKA2.390e-4653.85Pyridoxal kinase (Fragment) n=1 Tax=Phaeocystis an... [more]
UPI001261923F6.290e-4650.94pyridoxal kinase n=1 Tax=Mastomys coucha TaxID=356... [more]
A0A7J5Y2F2_DISMA8.140e-4650.64Pyridoxal kinase n=2 Tax=Perciformes TaxID=8111 Re... [more]
UPI000907003B9.800e-4651.85pyridoxal kinase n=1 Tax=Alligator mississippiensi... [more]
A0A7K4LR80_9AVES1.110e-4550.59Pyridoxal kinase (Fragment) n=15 Tax=Aves TaxID=87... [more]
A0A3Q2TUH0_CHICK1.810e-4550.93Pyridoxal kinase n=27 Tax=Neognathae TaxID=8825 Re... [more]
A0A3Q2ZL42_HIPCM2.480e-4551.28Pyridoxal kinase n=2 Tax=Syngnathidae TaxID=72045 ... [more]
Q5U3M7_DANRE2.930e-4552.60Pyridoxal kinase n=6 Tax=Danio rerio TaxID=7955 Re... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_39contigContig_39:112264..115650 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|349205|estExt_Genemark1.C_Ctg_390010
BRITEko00000,ko00001,ko01000
KEGG rclassRC00002,RC00017
KEGG ReactionR00174,R01909,R02493
KEGG Pathwayko00750,ko01100,map00750,map01100
KEGG koko:K00868
EC2.7.1.35
GOsGO:0000166,GO:0000287,GO:0001775,GO:0002252,GO:0002263,GO:0002274,GO:0002275,GO:0002283,GO:0002366,GO:0002376,GO:0002443,GO:0002444,GO:0002446,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005829,GO:0006081,GO:0006725,GO:0006732,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006887,GO:0006955,GO:0008144,GO:0008150,GO:0008152,GO:0008270,GO:0008283,GO:0008478,GO:0009058,GO:0009108,GO:0009110,GO:0009314,GO:0009443,GO:0009605,GO:0009628,GO:0009636,GO:0009719,GO:0009725,GO:0009743,GO:0009987,GO:0009991,GO:0010033,GO:0010165,GO:0010212,GO:0010243,GO:0010941,GO:0012505,GO:0014070,GO:0014075,GO:0016192,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0017076,GO:0017085,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019842,GO:0030141,GO:0030170,GO:0030554,GO:0030955,GO:0031402,GO:0031403,GO:0031410,GO:0031420,GO:0031667,GO:0031974,GO:0031981,GO:0031982,GO:0031983,GO:0032094,GO:0032553,GO:0032555,GO:0032559,GO:0032570,GO:0032940,GO:0033993,GO:0034284,GO:0034641,GO:0034774,GO:0035580,GO:0035639,GO:0036094,GO:0036230,GO:0042119,GO:0042221,GO:0042364,GO:0042493,GO:0042581,GO:0042802,GO:0042803,GO:0042816,GO:0042819,GO:0042822,GO:0042823,GO:0042981,GO:0043066,GO:0043067,GO:0043069,GO:0043094,GO:0043167,GO:0043168,GO:0043169,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043299,GO:0043312,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044428,GO:0044433,GO:0044444,GO:0044446,GO:0044464,GO:0045055,GO:0045321,GO:0046184,GO:0046483,GO:0046872,GO:0046903,GO:0046914,GO:0046983,GO:0048037,GO:0048519,GO:0048523,GO:0048545,GO:0050662,GO:0050789,GO:0050794,GO:0050896,GO:0051179,GO:0051186,GO:0051188,GO:0051234,GO:0051716,GO:0060205,GO:0060548,GO:0065007,GO:0070013,GO:0070279,GO:0070280,GO:0070887,GO:0071310,GO:0071322,GO:0071326,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:0097159,GO:0097367,GO:0097708,GO:0099503,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617,GO:1901654,GO:1901698,GO:1901700,GO:1901701
Preferred namePDXK
DescriptionPyridoxal kinase
COG categoryH
Max annot lvl33208|Metazoa
EggNOG OGsCOG2240@1|root,KOG2599@2759|Eukaryota,38DBW@33154|Opisthokonta,3BBWG@33208|Metazoa,3CS7I@33213|Bilateria,487KQ@7711|Chordata,493ZB@7742|Vertebrata,4GHAS@8782|Aves
Evalue3.49e-46
Seed ortholog9031.ENSGALP00000026076
Hectar predicted targeting categorymitochondrion
TranscriptId349527
TrackFilteredModels1
ProteinId349205
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|349205gene_9170Tribonema minus UTEX_B_3156 geneContig_39 112264..115650 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|349205Trimin1|349205|estExt_Genemark1.C_Ctg_390010Tribonema minus UTEX_B_3156 polypeptideContig_39 112301..115650 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_9170_1exon_9170_1Tribonema minus UTEX_B_3156 exonContig_39 112264..112543 +
exon_9170_2exon_9170_2Tribonema minus UTEX_B_3156 exonContig_39 114054..114230 +
exon_9170_3exon_9170_3Tribonema minus UTEX_B_3156 exonContig_39 115305..115519 +
exon_9170_4exon_9170_4Tribonema minus UTEX_B_3156 exonContig_39 115638..115650 +


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR5_9170UTR5_9170Tribonema minus UTEX_B_3156 five_prime_UTRContig_39 112264..112300 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_9170CDS_9170Tribonema minus UTEX_B_3156 CDSContig_39 112301..112543 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_9170 ID=mRNA_9170|Name=jgi.p|Trimin1|349205|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=685bp|location=Sequence derived from alignment at Contig_39:112264..115650+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
GACACCATACAGCGGGCGCGCGGCTTTGGCAGCTTACATGCTGTCTTGCC
TGAGTCGCAGAGTTGCGCCCATCGCAAGCCTCGCCGCCCGTTCCAGCATG
CATACCAGCAACACAATGCGCAATGCATCACCACTTGTAATGCACAGTTC
GCCTTTGCGAAGCGAACATGCTAAAGCTTTCCAGGCGACGCTGCCGGAGC
GGGAGGGAAGGGTGCTCTCCGTGCAGTCACATACCGTGCACGGATACGTG
GGGAACAAAGCAGCTACGCTGCCGTTGCAGCTGCTGGGCCTAGAGGTGGA
TCCGCTGAACACAGTGCACTTCAGCACGCACGCGGGGTATAAGCACCTGA
GAGGCGATGCCACAACGGCACAGCAATTCGACACGCTGGTGGAGGGTCTC
AAGATCAATGGCGTCTTCAACTATGACTACGTGCTGTCAGGGTATGCGCG
CTCAGAGGGTCTCCTCATGTCGCTGGCGAGCATCGTGACGGAGCTGCGCG
CCACCAACGGCAGCAAGGACAAGCACGCCGTGCGCTACTTCCTGGACCCT
GTTCTCGGTGATGACGACTGTGGCTTTTACGTGCCGCAAGAGCTGGTGGC
AACGTATCGCGACGCCATGCTGCCGCTGGCTACGGTCATTACGCCCAACA
CTTTTGAGGCTCAGCAGCTCAGGCGCAGCAGCTGA
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protein sequence of jgi.p|Trimin1|349205

>Trimin1|349205|estExt_Genemark1.C_Ctg_390010 ID=Trimin1|349205|estExt_Genemark1.C_Ctg_390010|Name=jgi.p|Trimin1|349205|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=216bp
MLSCLSRRVAPIASLAARSSMHTSNTMRNASPLVMHSSPLRSEHAKAFQA
TLPEREGRVLSVQSHTVHGYVGNKAATLPLQLLGLEVDPLNTVHFSTHAG
YKHLRGDATTAQQFDTLVEGLKINGVFNYDYVLSGYARSEGLLMSLASIV
TELRATNGSKDKHAVRYFLDPVLGDDDCGFYVPQELVATYRDAMLPLATV
ITPNTFEAQQLRRSS*
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mRNA from alignment at Contig_39:112264..115650+

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_9170 ID=mRNA_9170|Name=jgi.p|Trimin1|349205|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=3387bp|location=Sequence derived from alignment at Contig_39:112264..115650+ (Tribonema minus UTEX_B_3156 )
GACACCATACAGCGGGCGCGCGGCTTTGGCAGCTTACATGCTGTCTTGCC
TGAGTCGCAGAGTTGCGCCCATCGCAAGCCTCGCCGCCCGTTCCAGCATG
CATACCAGCAACACAATGCGCAATGCATCACCACTTGTAATGCACAGTTC
GCCTTTGCGAAGCGAACATGCTAAAGCTTTCCAGGCGACGCTGCCGGAGC
GGGAGGGAAGGGTGCTCTCCGTGCAGTCACATACCGTGCACGGATACGTG
GGGAACAAAGCAGCTACGCTGCCGTTGCAGGTGCGTGTGAGGTGGTGCGT
GTCATGCAGAATTACTTGCAGGCAGTGGCGTGTGATCTGAATGCATGTTT
GGGTCACATGCCCGCACTCCTTCCAGTGAGCATGTGCTGCAACGCGCTGC
AGCTGCTTCAGAATGGCAAGCGCCACACGGGGCCACACTTGAAGTTGCAA
AGCTTTGAAGTTGAAATTGCTTTGAGGCCAGTGCTCTATGTAGCAGGTGC
TATGTAGCAGCAACAGCAAGGAAGCAAGAACAAACATACATTTTTTTTAA
AGTGCAGGAATGCACGCAGGTGCACCTAGCCTTGAGCTCTCAGCTGATAG
CAGACTGGCGCTCTGACGGTGCCGCGTTTGGACTACTACAGTAGGGCCTG
GGATGGGGTGAGGGGTGGCGTGAGGGTGAAGGTTAGGGTTAGGGTTAGGT
CTAGTGTGAGGGTTAGGATCAGCCTTGCACCCTCCTCCAGCAGCAAGCAG
ACTGGCGCGTGCGTTGCCTTCAAGTATTGAATGTGAGGGTCGTTGTGTGT
GCGCTTCGTGCACAGTGCTCAGCCATGTGCAAGTGCTCAGGCACAGATGT
AAAAAGTTCACAGATGGCGGCAAAGCCACAAGCAATTGATGGCCACCTGC
AGCTTGATTGACGATTAGGGTTATCAGCTGCAACCCTAGCTGAAGTCTGC
TGTCCAGGTTAAATGACTCAGAACAGGGTCAGGCGACTTCAAGCTGAGAG
GCGGGTATAGCAGGCGGTGTGATGTTGTTATTTCACTGTTGTTCGATTCT
CAAGATGTGCAGTCTCTTAGCTGCTTGTCACTCCCGACAGTTGTCGAAAA
CCTGAAGGTGATGGGGGGTCTATCATCTTGCAACTTCAAGTGTGCACTGC
CTCTGCTGTGCTAACTCTATGTGCCTCTTTAATGAGTAGGAACCTAACAG
TAGAAACCGCAGCCCTAACCCTACTTAGCTCACGCTCTGTCAGCCGATCA
GGCAAGAGCACACAGCAGGCTACCCCCGTATTCACGGCAATATATGATAA
TCACACACACATATGTTCCTGTTCATGTATGCATCACCACCACACATATC
CAAAACAAGCATAAGTCACGTCAGCGTTACCGATAGGCAGCATCGTGCAG
TTGCTATTTACTCTGATGGCTGCTGCTGTGACTCAGCCAAGCCATAACCC
TGAACCTGCCTCAGTCTGAACTCCACCCTACTTGGCAATCCCAGTCCACG
CTATACATTATTTGCCTGCCCTGCAGCTGTTACGACTGGAGGTGAAGGTG
GCCCCACCGCACTCATCTACCACCACAGTACCGTACTCATTTGTAGCAGC
AGAGGACGTCAAGGCTGCATCGTGCACCGCAATGTTGGCACACGAGTCGC
GTTACAACTCTTGCCCTGTTTCCCAGGCTTCTCTTGCCTATCAACCTTTG
TCCTGCTGCTGGTGCGAAGGTGCCTCAACAATACGACAATGGAACCTAAA
TAACCCAAGATAGTGATTTCTATTCTTGCCGATGCTGCAGCTGCTGGGCC
TAGAGGTGGATCCGCTGAACACAGTGCACTTCAGCACGCACGCGGGGTAT
AAGCACCTGAGAGGCGATGCCACAACGGCACAGCAATTCGACACGCTGGT
GGAGGGTCTCAAGATCAATGGCGTCTTCAACTATGACTACGTGCTGTCAG
GGTATGCGCGCTCAGAGGTGGGGCTAGGGTTAGGGTTAGGGATAGCACTA
GGATTAGCGCTGGGCACACAGTGCTGGCGCTTTGATGGCTGTTGAGAACT
TTGTATATGCGCTTGGAGGCGGGGCTAGGGTTAGGGTTAACACTAAGGCT
AGGGCCGGGCAAAGTCGGCTGCACAGCGCTGCCGCTGCAGCCGCCCCCTG
CGCTGCACTGCTGAGTTCTGTGGGGCTGGTGCACTCGTCCTGTCATTTGT
CAACTGCAACTGCAAGTGTAGCCTGCACAAGTATGCAGTCTCAGTGCTGT
GTGTGTAGACCGGACTCGTGGGCATCGCGGATACTGCTACAGTGTCACGT
GCTCAGCTGAGCTGCTGAGTTTGCGGGCGCCCATGGTGCTGCAATCGTAA
TGGCGATGCTCGGCAACTGCTCCTGAGCGCTGCTGTTGAATCAGCAGCAG
ATGTGTTTCTGAGCGCTGTCTGTCATCCGCTGCTGAGCGCTGTGGTCTCA
CCTCTGCTGAGCGCCGCCTCTCATTCACTGCTGAGCGCTGCCTTTAGTTC
GCTGCTGAGCGCTGCTTTTCATTAGCTACTGAGCGCTGCTGTAGCTCCTG
AGCGCTGCCTTTCGTCCGCTGCTGCGCGCTGCGGTCTCGCCCATTCGCAC
CTCAAACAAGGTATCAGGAGTCACCAGCGACTGTCGCGACGGAGCTGTGC
ACACTTTTCTGTTGAGCACCGTGAGCACTGTGATTTTAACCCCGGCTACC
TTCGGATTAGGGTCAGAGTTTACATTAGGGTTAGGCATAGGACTGCCTGA
TCATCCTTCAATTCGTCGCTGCGCAGTGCTGCTCCTTCACCCCAATCACG
TTTATTCTGCTGCTGAGCACTGTAACTCATCTGGCGCTTGTTATTGACAG
GGCCTCGTGTTGCTGGCAAGCATGCTTTTTCACCAACTTCATGGTTATTC
CGCTGCTGAGCCCTGCAACTCATTTTGCTGCTTGAATGTTGACAGGGCCT
CCTCATGTTGCTGGCAAGCATGCTCTTTCACCACGATCATGTTTATTCCG
CTGCTGAGCACTGCAACACGTTGCTATTTGAATGTTGACAGGGTCTCCTC
ATGTCGCTGGCGAGCATCGTGACGGAGCTGCGCGCCACCAACGGCAGCAA
GGACAAGCACGCCGTGCGCTACTTCCTGGACCCTGTTCTCGGTGATGACG
ACTGTGGCTTTTACGTGCCGCAAGAGCTGGTGGCAACGTATCGCGACGCC
ATGCTGCCGCTGGCTACGGTCATTACGCCCAACACTTTTGAGGCTCAGCA
GCTCAGGTGTGTTGCGGGCCAACTTGCGACGTTGCAGATGATTACTTGGG
GTCAGGGTTAGGGTTACATATACCGTGATGCCATGCTGCCGCTGGCCACG
GGCATCACGCCTAACACCACTGAGGCGCAGCAGCTGA
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Coding sequence (CDS) from alignment at Contig_39:112264..115650+

>mRNA_9170 ID=mRNA_9170|Name=jgi.p|Trimin1|349205|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=648bp|location=Sequence derived from alignment at Contig_39:112264..115650+ (Tribonema minus UTEX_B_3156 )
ATGCTGTCTTGCCTGAGTCGCAGAGTTGCGCCCATCGCAAGCCTCGCCGC
CCGTTCCAGCATGCATACCAGCAACACAATGCGCAATGCATCACCACTTG
TAATGCACAGTTCGCCTTTGCGAAGCGAACATGCTAAAGCTTTCCAGGCG
ACGCTGCCGGAGCGGGAGGGAAGGGTGCTCTCCGTGCAGTCACATACCGT
GCACGGATACGTGGGGAACAAAGCAGCTACGCTGCCGTTGCAGCTGCTGG
GCCTAGAGGTGGATCCGCTGAACACAGTGCACTTCAGCACGCACGCGGGG
TATAAGCACCTGAGAGGCGATGCCACAACGGCACAGCAATTCGACACGCT
GGTGGAGGGTCTCAAGATCAATGGCGTCTTCAACTATGACTACGTGCTGT
CAGGGTATGCGCGCTCAGAGGGTCTCCTCATGTCGCTGGCGAGCATCGTG
ACGGAGCTGCGCGCCACCAACGGCAGCAAGGACAAGCACGCCGTGCGCTA
CTTCCTGGACCCTGTTCTCGGTGATGACGACTGTGGCTTTTACGTGCCGC
AAGAGCTGGTGGCAACGTATCGCGACGCCATGCTGCCGCTGGCTACGGTC
ATTACGCCCAACACTTTTGAGGCTCAGCAGCTCAGGCGCAGCAGCTGA
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