mRNA_9137 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|149310
Unique NamemRNA_9137
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|149310 vs. uniprot
Match: A0A835YS63_9STRA (Kinase-like domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YS63_9STRA)

HSP 1 Score: 461 bits (1185), Expect = 3.610e-164
Identity = 226/226 (100.00%), Postives = 226/226 (100.00%), Query Frame = 1
Query:    1 ELKKEVALHASLTFKHITQLQGGCTTPPHVFLVLELAPLGSLFGLLHLGPQLADGSCAGTVPWEVKVAMVWDVAKAIEYLHMRGVVHRDLKSLNVLVFAGHCAKVCDFGLARIKQTASTFGTAARPVGTYAWMAPEIVDSDPYTPADDVYSLGLIMYEVLSGRVPFHDKNGVQMMRAVTSGDRPAALPPLTEASPCGAAALEELMRRCWAQNAGKRPIAKDVSADM 678
            ELKKEVALHASLTFKHITQLQGGCTTPPHVFLVLELAPLGSLFGLLHLGPQLADGSCAGTVPWEVKVAMVWDVAKAIEYLHMRGVVHRDLKSLNVLVFAGHCAKVCDFGLARIKQTASTFGTAARPVGTYAWMAPEIVDSDPYTPADDVYSLGLIMYEVLSGRVPFHDKNGVQMMRAVTSGDRPAALPPLTEASPCGAAALEELMRRCWAQNAGKRPIAKDVSADM
Sbjct:    1 ELKKEVALHASLTFKHITQLQGGCTTPPHVFLVLELAPLGSLFGLLHLGPQLADGSCAGTVPWEVKVAMVWDVAKAIEYLHMRGVVHRDLKSLNVLVFAGHCAKVCDFGLARIKQTASTFGTAARPVGTYAWMAPEIVDSDPYTPADDVYSLGLIMYEVLSGRVPFHDKNGVQMMRAVTSGDRPAALPPLTEASPCGAAALEELMRRCWAQNAGKRPIAKDVSADM 226          
BLAST of jgi.p|Trimin1|149310 vs. uniprot
Match: A0A835Z025_9STRA (Kinase-like domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z025_9STRA)

HSP 1 Score: 207 bits (528), Expect = 1.770e-63
Identity = 111/233 (47.64%), Postives = 149/233 (63.95%), Query Frame = 1
Query:    1 ELKKEVALHASLTFKHITQLQGGCTTPPHVFLVLELAPLGSLFGLLHL-GPQLADGSCAGTVPWEVKVAMVWDVAKAIEYLHMRG--VVHRDLKSLNVLVFAGHCAKVCDFGLARIKQTA----STFGTAARPVGTYAWMAPEIVDSDPYTPADDVYSLGLIMYEVLSGRVPFHDKNGVQMMRAVTSGDRPAALPPLTEASPCGAAALEELMRRCWAQNAGKRPIAKDVSADM 678
            EL+K++ +HA+L F HI QL G CT  P +F+V ELAP GSL+ +LH  GP  A         WE KV M+WDVA+A+E+LH     ++H+DL+S NVL+F+  CAKV DFGL +I + A    S   T A P G YAWMAPE++D +PY    D+YS+G+IMYEV+SG++PFHD +  Q+MRA   G RP       +AS  GA  +  L+ RC   + G RP +K+VS  M
Sbjct:   48 ELRKQLTIHANLRFLHIVQLIGACTMVPQLFIVTELAPYGSLYSILHTTGPVQAPH-------WEDKVYMLWDVARAVEFLHQCNPVIMHQDLRSANVLIFSNCCAKVADFGLPKIPKVALAIASNLVTMATPTGAYAWMAPEVMDGEPYGVRADIYSMGMIMYEVVSGKLPFHDHSLAQLMRATLRGRRPEVAD--ADASLAGAGEIIALLHRCCMHDTGNRPGSKEVSTVM 271          
BLAST of jgi.p|Trimin1|149310 vs. uniprot
Match: A0A835Z1I8_9STRA (Kinase-like domain-containing protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1I8_9STRA)

HSP 1 Score: 186 bits (471), Expect = 4.030e-54
Identity = 107/229 (46.72%), Postives = 142/229 (62.01%), Query Frame = 1
Query:    1 ELKKEVALHASLTFKHITQLQGGCTTPPHVFLVLELAPLGSLFGLLHLGPQLADGSCAGTVPWEVKVAMVWDVAKAIEYLHMRG--VVHRDLKSLNVLVFAGHCAKVCDFGLA-RIKQTASTFGTAARPVGTYAWMAPEIVDSDPYTPADDVYSLGLIMYEVLSGRVPFHDKNGVQMMRAVTSGDRPAALPPLTEASPCGAAALEELMRRCWAQNAGKRPIAKDVSADM 678
            +L++EV LHASL+F +I QL G  T PP + +V+ELAP GSLF +LHL P++A         W   +  +      + YLH     V+HRDLKS NVLVF G  AK+CDFGLA      A T    +   GTYAWMAPEI+    YT A DVYSLGLI+YEV+SG++PF D+N +Q+   +  G+RP  LP     +P G   L  LM+RCW Q+AG RP ++  +A++
Sbjct:   67 QLRREVRLHASLSFPNIVQLIGASTVPPRLGIVMELAPYGSLFDILHL-PRVAQ-----VREWVCHIHRINQTEVGMLYLHNHRPQVLHRDLKSANVLVFEGWQAKICDFGLATNFDANAHTTTRGSGMRGTYAWMAPEIMRGAKYTTASDVYSLGLIVYEVISGKIPFQDQNLMQLALGLDRGERPL-LPTHDLDAPAGGHRLAALMQRCWQQDAGSRPRSRATTAEL 288          
BLAST of jgi.p|Trimin1|149310 vs. uniprot
Match: A0A835Z762_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z762_9STRA)

HSP 1 Score: 161 bits (407), Expect = 8.570e-44
Identity = 87/190 (45.79%), Postives = 125/190 (65.79%), Query Frame = 1
Query:    1 ELKKEVALHASLTFKHITQLQGGCTTPPHVFLVLELAPLGSLFGLLHLGPQLADGSCAGTVP-WEVKVAMVWDVAKAIEYLHMRGVVHRDLKSLNVLVFAGHCAKVCDFGLARIK--QTASTFGTAARPVGTYAWMAPEIVDSDPYTPADDVYSLGLIMYEVLSGRVPFHD-KNGVQMMRAVTSGDRPAA 558
            EL++++ L+A L F +I QL G CT PP + LV+EL+  GSL+ +L    +  D   A   P WE K+A++ DV +AI YLH  G++H DLKS NVLVF    AKVCD GLA+I   QT+ +  +   P G Y WMAPEI+++  YT   D+Y +G+IMYEV+SG+VPF + ++ + + +AV   +RPA+
Sbjct:  138 ELRRKIKLNAGLKFPYIVQLFGACTVPPTICLVMELSDHGSLYDVLKRAREKGDAYDAYETPDWEEKLAILSDVTRAISYLHQNGMLHYDLKSTNVLVFDKWRAKVCDIGLAKIDKIQTSISHRSTKMPTGAY-WMAPEIMENKGYTAQADIYGIGMIMYEVISGKVPFEEMQDPLSVAKAVVPAERPAS 326          
BLAST of jgi.p|Trimin1|149310 vs. uniprot
Match: D7G890_ECTSI (Protein kinase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G890_ECTSI)

HSP 1 Score: 152 bits (384), Expect = 3.990e-39
Identity = 83/216 (38.43%), Postives = 127/216 (58.80%), Query Frame = 1
Query:    4 LKKEVALHASLTFKHITQLQGGCTTPPHVFLVLELAPLGSLFGLLHLGPQLADGSCAGTVPWEVKVAMVWDVAKAIEYLHMRGVVHRDLKSLNVLVFAGHCAKVCDFGLARIKQTASTFGTAARPVGTYAWMAPEIVDSDPYTPADDVYSLGLIMYEVLSGRVPFHDKNGVQMMRAVTSGDRPAALPPLTEASPCGAAALEELMRRCWAQNAGKRP 651
            L+KE+ +H++L F H+ QL    T PP + LV+ELA  GSL   LH        S +  +   ++ A ++D+A+ + +LH +G++HRDLKS NVL+FA    K+CDFGL++IK T S+  +    VGT  WM+PE +D  P +   D+YS G++ +EV++   PF   N  Q+++AV   +R   +P     SP     +  LM +CW Q+ G RP
Sbjct:  221 LRKEIRIHSNLRFDHVVQLYAASTIPPRLCLVVELASRGSLRENLH--------SSSEPLAHALQTAFLYDIARGMSFLHKKGILHRDLKSANVLMFANGHLKLCDFGLSKIK-TESSSRSKRGAVGTAQWMSPEEMDESPASERTDLYSFGVVCFEVITRMEPFKGMNPTQVIKAVVLNERRPQIPEWASGSPD----VVPLMEQCWKQDPGHRP 423          
BLAST of jgi.p|Trimin1|149310 vs. uniprot
Match: A0A836C9Q6_9STRA (Protein kinase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9Q6_9STRA)

HSP 1 Score: 151 bits (381), Expect = 2.450e-38
Identity = 90/217 (41.47%), Postives = 129/217 (59.45%), Query Frame = 1
Query:   64 GGCTTPPHVFLVLELAPLGSLFGLLH-------LGPQLADGSCAGTVPWEVKVAMVWDVAKAIEYLHMRGVVHRDLKSLNVLVFAGHCAKVCDFGLARIKQTA---STFGTAARPVGTYAWMAPEIVDSDPYTPADDVYSLGLIMYEVLSGRVPFHDKNGVQMMRAVTSGDRP-----AALPPLTEASPCGAAALEELMRRCWAQNAGKRPIAKDVS 669
            G CT  P+  +V+E+A  GSLF LL+         P+      +    W+ KV+M+ D+  A+ YLH RG++HRDLKSLNVLVF     KVCDFG ++ K  A   +T    A+P  TY W APEI+  + +T A DVYSL ++MYEV++GR+PF D + V + RAVT+ +RP     AA      A+  G + + +L++  W QN  +RP A ++S
Sbjct:  481 GACTVAPNYCMVMEVAHFGSLFDLLYQPAKRQAFDPETLQRLESWLKSWQGKVSMIRDLTCALTYLHHRGLLHRDLKSLNVLVFNNLQLKVCDFGQSKFKDAARRPNTVTLMAQPA-TYQWAAPEIMIKEAFTEAADVYSLSMVMYEVVTGRMPFVDMSDVDIFRAVTNKERPCLNLIAAELHEVSANAIGQSEILQLIQDGWQQNPTQRPTATEMS 696          
BLAST of jgi.p|Trimin1|149310 vs. uniprot
Match: A0A6H5KGQ4_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGQ4_9PHAE)

HSP 1 Score: 149 bits (375), Expect = 5.680e-38
Identity = 84/217 (38.71%), Postives = 124/217 (57.14%), Query Frame = 1
Query:    4 LKKEVALHASLTFKHITQLQGGCTTPPHVFLVLELAPLGSLFGLLHLGPQLADGSCAGTVPWEVKVAMVWDVAKAIEYLHMRGVVHRDLKSLNVLVFAGHCAKVCDFGLARIKQTASTFGTAARPVGTYAWMAPEIVDSDPYTPADDVYSLGLIMYEVLSGRVPFHDKNGVQMMRAVTS-GDRPAALPPLTEASPCGAAALEELMRRCWAQNAGKRP 651
            ++KE+  HASL F H+ QL    T  P++ +V+E A  GSL+  LH        S    +   ++ A ++D+A+ + +LH +G++HRDLKS NVLVFA    K+CDFGL+++ + +S+      PVGT AWM+PE ++    T   DVYS G++ YEV +   PF     VQ+MRAV   G RP        A P  +  +  LM +CW Q+  +RP
Sbjct:  225 IRKEIRTHASLRFDHVVQLYAASTIAPNLCMVMEYASEGSLWQYLH--------STRKPLAHPLQTAFLFDIARGLMFLHNKGILHRDLKSANVLVFANRRLKLCDFGLSKVIEESSSRSKRG-PVGTTAWMSPEAINGSAATQLTDVYSFGVVCYEVATRMEPFKGMMPVQVMRAVADMGSRPEI-----PAGPSASPDVVRLMEQCWKQDPAQRP 427          
BLAST of jgi.p|Trimin1|149310 vs. uniprot
Match: A0A6H5KS20_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KS20_9PHAE)

HSP 1 Score: 147 bits (372), Expect = 3.420e-37
Identity = 86/220 (39.09%), Postives = 125/220 (56.82%), Query Frame = 1
Query:    4 LKKEVALHASLTFKHITQLQGGCTTPPHVFLVLELAPLGSLFGLLHLGPQLADGSCAGTVPWEVKVAMVWDVAKAIEYLHMRGVVHRDLKSLNVLVFAGHCAKVCDFGLARIKQTASTFGTAARPVGTYAWMAPEIVDSDPYTPADDVYSLGLIMYEVLSGRVPFHDKNGVQMMRAVTS-GDRPAALPPLTEASPCGAAALEE---LMRRCWAQNAGKRP 651
            ++KE+  HASL F H+ QL    T  P++ +V+E A  GSL+  LH        S    +   ++ A ++D+A+ + +LH +G++HRDLKS NVLVFA    K+CDFGL+++ + +S+      PVGT  WM+PE ++    T   DVYS G++ YEV +   PF     VQ+MRAV   G RP          P GA+A  +   LM RCW Q+  +RP
Sbjct:  279 IRKEIRTHASLRFDHVVQLYAASTIAPNLCMVMEYASEGSLWQHLH--------STRKPLAHPLQAAFLFDIARGLMFLHNKGILHRDLKSANVLVFANRRLKLCDFGLSKVIEESSSRSKRG-PVGTTPWMSPEAINGSAATQLTDVYSFGVVCYEVATRMEPFRGMMPVQVMRAVADMGSRPEI--------PAGASASPDVVPLMERCWKQDPAQRP 481          
BLAST of jgi.p|Trimin1|149310 vs. uniprot
Match: A0A7S0QUW8_9CHLO (Hypothetical protein n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0QUW8_9CHLO)

HSP 1 Score: 140 bits (352), Expect = 5.310e-37
Identity = 87/224 (38.84%), Postives = 123/224 (54.91%), Query Frame = 1
Query:    1 ELKKEVALHASLTFKHITQLQGGCTTPPHVFLVLELAPLGSLFGLLHLGPQLADGSCAGTVPWEVKVAMVWDVAKAIEYLHMR--GVVHRDLKSLNVLVFAGHCAKVCDFGLARIKQTASTFGTAARPVGTYAWMAPEIVDSDPYTPADDVYSLGLIMYEVLSGRVPFHDKNGVQMMRAVTSGDRPAALPPLTEASPCGAAALEELMRRCWAQNAGKRPIAKDV 666
            E ++EVA+   L   H+    G CT  P + +++E A +GSL+ +L       D   A  V W        + AK + YLH R   +VHRDLKS+N+LV A    KV DFGLAR K T+     A   VGT+ WMAPE++D+ PY    DVYS G++++E+L+   PF   + +Q+MRA+  G+RP    PL     C A+ LE L+  CW  +   RP  + V
Sbjct:   55 EFRREVAMLHKLRHPHVILFMGACTLAPELCIIMEHARIGSLYSVLRNKHNQID--MATVVRWAT------ETAKGMNYLHTRTPAIVHRDLKSVNLLVDADWHIKVSDFGLARTKATSQH---AYTQVGTWGWMAPEVLDNKPYDEKADVYSFGVVLWELLTREEPFKGMHPMQIMRAIDRGERP----PLPADVNCPASYLE-LLHGCWDADPPSRPTFEQV 262          
BLAST of jgi.p|Trimin1|149310 vs. uniprot
Match: A0A835ZPF1_9STRA (Kinase-like domain-containing protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZPF1_9STRA)

HSP 1 Score: 145 bits (367), Expect = 5.660e-37
Identity = 93/235 (39.57%), Postives = 135/235 (57.45%), Query Frame = 1
Query:    1 ELKKEVALHASLTFKHITQLQGGCTTPPHVFLVLELAPLGSLFGLLHLGPQLADGSCAG--TVPWEVKVAMVWDVAKAIEYLHMRG-VVHRDLKSLNVLV--FAGHC-AKVCDFGLARIKQTASTFGTAARPVGTYAWMAPEIVDSDPYTPADDVYSLGLIMYEVLSGRVPFHD-KNGVQMMRAVTSGDRPAALPPLTEASPCGAAA------LEELMRRCWAQNAGKRPIAKDV 666
            E++ EV +HA+LT+ HI  L G CT PP + +V+E A  GSLF  LH GP +  G+  G     W VK+A++ DVA  + +LH    ++H DLKS NVLV    G C AK+CDFG ++        G   R   TY WMAPE + +  YT A D+YSLG+I+YE++ G+VPF + +N  +++ ++    RPA   P   A+            + +LM +CWA++  +RP   DV
Sbjct:  242 EMRNEVKMHATLTYPHIVTLWGACTVPPTLCIVMERAEHGSLFDQLH-GP-IPGGAFKGDDAATWGVKLALLLDVADGVGHLHSNAHLLHGDLKSPNVLVCLMYGQCVAKICDFGHSKPYSMTGQTGQHTR---TYNWMAPEALPTPQYTTAADIYSLGMIIYEIVFGKVPFDECRNHDELVASLARQQRPAQANPREWANTQRTDTRFFSNDVFKLMMQCWAESISERPSIDDV 471          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|149310 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YS63_9STRA3.610e-164100.00Kinase-like domain-containing protein (Fragment) n... [more]
A0A835Z025_9STRA1.770e-6347.64Kinase-like domain-containing protein (Fragment) n... [more]
A0A835Z1I8_9STRA4.030e-5446.72Kinase-like domain-containing protein n=2 Tax=Trib... [more]
A0A835Z762_9STRA8.570e-4445.79Kinase-like domain-containing protein n=1 Tax=Trib... [more]
D7G890_ECTSI3.990e-3938.43Protein kinase domain-containing protein n=1 Tax=E... [more]
A0A836C9Q6_9STRA2.450e-3841.47Protein kinase domain-containing protein n=1 Tax=T... [more]
A0A6H5KGQ4_9PHAE5.680e-3838.71Protein kinase domain-containing protein n=1 Tax=E... [more]
A0A6H5KS20_9PHAE3.420e-3739.09Protein kinase domain-containing protein n=1 Tax=E... [more]
A0A7S0QUW8_9CHLO5.310e-3738.84Hypothetical protein n=1 Tax=Pyramimonas obovata T... [more]
A0A835ZPF1_9STRA5.660e-3739.57Kinase-like domain-containing protein n=2 Tax=Trib... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_44contigContig_44:884764..885441 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|149310|gw1.44.71.1
Descriptionprotein kinase activity
COG categoryKLT
Max annot lvl2759|Eukaryota
EggNOG OGsCOG0515@1|root,KOG0192@2759|Eukaryota
Evalue6.55e-40
Seed ortholog2880.D7G890
Hectar predicted targeting categoryother localisation
TranscriptId149632
TrackFilteredModels1
ProteinId149310
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|149310gene_9137Tribonema minus UTEX_B_3156 geneContig_44 884764..885441 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_9137_1exon_9137_1Tribonema minus UTEX_B_3156 exonContig_44 884764..885441 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_9137CDS_9137Tribonema minus UTEX_B_3156 CDSContig_44 884764..885441 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|149310Trimin1|149310|gw1.44.71.1Tribonema minus UTEX_B_3156 polypeptideContig_44 884764..885441 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_9137 ID=mRNA_9137|Name=jgi.p|Trimin1|149310|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=678bp|location=Sequence derived from alignment at Contig_44:884764..885441- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
GAGCTGAAGAAGGAGGTCGCTCTGCACGCGAGCCTCACGTTCAAGCACAT
CACTCAACTGCAGGGCGGCTGCACCACACCGCCTCACGTATTTCTCGTCC
TTGAGCTGGCGCCCCTGGGCAGTCTTTTCGGCCTGCTGCACCTCGGCCCG
CAACTGGCAGATGGCAGCTGCGCAGGCACTGTTCCATGGGAGGTCAAGGT
TGCGATGGTGTGGGACGTGGCCAAGGCAATCGAGTACCTCCATATGCGAG
GCGTGGTCCACCGCGATCTCAAATCGCTCAACGTGCTCGTCTTCGCGGGT
CACTGCGCCAAGGTGTGCGACTTCGGACTAGCGCGCATCAAACAGACCGC
CAGCACCTTCGGCACCGCCGCGCGGCCCGTGGGCACGTATGCGTGGATGG
CTCCAGAGATCGTCGACTCCGATCCCTACACGCCCGCCGACGACGTGTAC
AGCCTGGGCCTTATCATGTATGAGGTCCTGTCTGGGCGCGTCCCGTTCCA
CGACAAAAACGGTGTGCAGATGATGAGGGCGGTCACCTCGGGGGACCGTC
CGGCAGCATTGCCGCCCCTCACGGAAGCATCGCCCTGCGGCGCGGCCGCT
CTGGAGGAACTCATGCGCCGGTGCTGGGCACAGAACGCAGGCAAACGCCC
CATCGCAAAGGATGTCAGCGCGGACATG
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protein sequence of jgi.p|Trimin1|149310

>Trimin1|149310|gw1.44.71.1 ID=Trimin1|149310|gw1.44.71.1|Name=jgi.p|Trimin1|149310|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=226bp
ELKKEVALHASLTFKHITQLQGGCTTPPHVFLVLELAPLGSLFGLLHLGP
QLADGSCAGTVPWEVKVAMVWDVAKAIEYLHMRGVVHRDLKSLNVLVFAG
HCAKVCDFGLARIKQTASTFGTAARPVGTYAWMAPEIVDSDPYTPADDVY
SLGLIMYEVLSGRVPFHDKNGVQMMRAVTSGDRPAALPPLTEASPCGAAA
LEELMRRCWAQNAGKRPIAKDVSADM
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mRNA from alignment at Contig_44:884764..885441-

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_9137 ID=mRNA_9137|Name=jgi.p|Trimin1|149310|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=678bp|location=Sequence derived from alignment at Contig_44:884764..885441- (Tribonema minus UTEX_B_3156 )
GAGCTGAAGAAGGAGGTCGCTCTGCACGCGAGCCTCACGTTCAAGCACAT CACTCAACTGCAGGGCGGCTGCACCACACCGCCTCACGTATTTCTCGTCC TTGAGCTGGCGCCCCTGGGCAGTCTTTTCGGCCTGCTGCACCTCGGCCCG CAACTGGCAGATGGCAGCTGCGCAGGCACTGTTCCATGGGAGGTCAAGGT TGCGATGGTGTGGGACGTGGCCAAGGCAATCGAGTACCTCCATATGCGAG GCGTGGTCCACCGCGATCTCAAATCGCTCAACGTGCTCGTCTTCGCGGGT CACTGCGCCAAGGTGTGCGACTTCGGACTAGCGCGCATCAAACAGACCGC CAGCACCTTCGGCACCGCCGCGCGGCCCGTGGGCACGTATGCGTGGATGG CTCCAGAGATCGTCGACTCCGATCCCTACACGCCCGCCGACGACGTGTAC AGCCTGGGCCTTATCATGTATGAGGTCCTGTCTGGGCGCGTCCCGTTCCA CGACAAAAACGGTGTGCAGATGATGAGGGCGGTCACCTCGGGGGACCGTC CGGCAGCATTGCCGCCCCTCACGGAAGCATCGCCCTGCGGCGCGGCCGCT CTGGAGGAACTCATGCGCCGGTGCTGGGCACAGAACGCAGGCAAACGCCC CATCGCAAAGGATGTCAGCGCGGACATG
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Coding sequence (CDS) from alignment at Contig_44:884764..885441-

>mRNA_9137 ID=mRNA_9137|Name=jgi.p|Trimin1|149310|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=678bp|location=Sequence derived from alignment at Contig_44:884764..885441- (Tribonema minus UTEX_B_3156 )
GAGCTGAAGAAGGAGGTCGCTCTGCACGCGAGCCTCACGTTCAAGCACAT
CACTCAACTGCAGGGCGGCTGCACCACACCGCCTCACGTATTTCTCGTCC
TTGAGCTGGCGCCCCTGGGCAGTCTTTTCGGCCTGCTGCACCTCGGCCCG
CAACTGGCAGATGGCAGCTGCGCAGGCACTGTTCCATGGGAGGTCAAGGT
TGCGATGGTGTGGGACGTGGCCAAGGCAATCGAGTACCTCCATATGCGAG
GCGTGGTCCACCGCGATCTCAAATCGCTCAACGTGCTCGTCTTCGCGGGT
CACTGCGCCAAGGTGTGCGACTTCGGACTAGCGCGCATCAAACAGACCGC
CAGCACCTTCGGCACCGCCGCGCGGCCCGTGGGCACGTATGCGTGGATGG
CTCCAGAGATCGTCGACTCCGATCCCTACACGCCCGCCGACGACGTGTAC
AGCCTGGGCCTTATCATGTATGAGGTCCTGTCTGGGCGCGTCCCGTTCCA
CGACAAAAACGGTGTGCAGATGATGAGGGCGGTCACCTCGGGGGACCGTC
CGGCAGCATTGCCGCCCCTCACGGAAGCATCGCCCTGCGGCGCGGCCGCT
CTGGAGGAACTCATGCGCCGGTGCTGGGCACAGAACGCAGGCAAACGCCC
CATCGCAAAGGATGTCAGCGCGGACATG
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