mRNA_9060 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|349467 vs. uniprot
Match: A0A835YS19_9STRA (D5_N domain-containing protein n=5 Tax=Tribonema minus TaxID=303371 RepID=A0A835YS19_9STRA) HSP 1 Score: 1950 bits (5051), Expect = 0.000e+0 Identity = 988/988 (100.00%), Postives = 988/988 (100.00%), Query Frame = 1 Query: 25 MHTQKKCFRRPVIARHALKPILLSYPIGKFSHQTDHVISTTFFLLPSFESSMDIDDFDLRAAENGFIVDEEPPEEPPVPLATPPAXXXXXCAPRPSPKRNTSYARQKVQQYLAPSGQGIKGSHNGMDDMRGVFDVPNYETDADVRETFFTDIIEDLHRCGSPFVLMENICRLPDDAETRLRLDIDVEVPYKLNADHPLALTPAVAHKFCKTLWDVLHECTGISGASRFFVDAKGAPTPTVAGMWKHGVKITCSDIKCTHKDMLGIRQLMNDRYSAWGHEEWLDGKEAHEMQIIDPCIYENNGTMLHGAVKEKQQQHGGYKTVAVMGGDLHDLSFAELLRATSILHHDESTAKLQWRAGKEPVIVQRRGAKRTRRSAGAVALAAAAEHYTNKLTTADVQHIYEAAGGELQLQQIAGIRPGTISWREVSPGTDARVCLVPECAGSGHSDNALLIECYHGLKYKCCSTGKCLYLERWETEEDLLFGGDNGLARLFAKLRGHDVKNIGGDGDKARFIIYCEKTALWKPRYNSFVRCTEIPKLVAAYVEPRLQNLEPYLEAACAXXXXXXXXXXXXXXXXXELRDLKAKAASLFAIKESIKGTSKREAILKDVFSTIRDEDFEKLLDVNKDIFSCQNGVVELATATLRPRVRKDMLTRAVNIDYNADSPRIPEVMQLLTDITLAAPNRLNRPALLERLLRILGYSITGHVREEIIVFLLGCSARNGKGIIESLLQQVLGCMFYQAPQSFLTACKAVSAGAASSHMMALRATGGRCVDAQMIKYISGGADISGRELFGKQTSFSPTAVPRANTNEMPIIKAEPAIMQRIEIIPCDAKFRTPGDAKFPYDANDKTHFIKNTKLRENLPVEAFLAVVVQAAKRWYEGGLGEKPACCKLACDAFAAENDTLQSWINDECELGPREGADPALILCSSAFSGYNNSRARQEPALPPIKKRDMHEQMAAKGFAKIDDYRKAHSQDNCKCVYAGLKSAGGY 2988 MHTQKKCFRRPVIARHALKPILLSYPIGKFSHQTDHVISTTFFLLPSFESSMDIDDFDLRAAENGFIVDEEPPEEPPVPLATPPAXXXXXCAPRPSPKRNTSYARQKVQQYLAPSGQGIKGSHNGMDDMRGVFDVPNYETDADVRETFFTDIIEDLHRCGSPFVLMENICRLPDDAETRLRLDIDVEVPYKLNADHPLALTPAVAHKFCKTLWDVLHECTGISGASRFFVDAKGAPTPTVAGMWKHGVKITCSDIKCTHKDMLGIRQLMNDRYSAWGHEEWLDGKEAHEMQIIDPCIYENNGTMLHGAVKEKQQQHGGYKTVAVMGGDLHDLSFAELLRATSILHHDESTAKLQWRAGKEPVIVQRRGAKRTRRSAGAVALAAAAEHYTNKLTTADVQHIYEAAGGELQLQQIAGIRPGTISWREVSPGTDARVCLVPECAGSGHSDNALLIECYHGLKYKCCSTGKCLYLERWETEEDLLFGGDNGLARLFAKLRGHDVKNIGGDGDKARFIIYCEKTALWKPRYNSFVRCTEIPKLVAAYVEPRLQNLEPYLEAACAXXXXXXXXXXXXXXXXXELRDLKAKAASLFAIKESIKGTSKREAILKDVFSTIRDEDFEKLLDVNKDIFSCQNGVVELATATLRPRVRKDMLTRAVNIDYNADSPRIPEVMQLLTDITLAAPNRLNRPALLERLLRILGYSITGHVREEIIVFLLGCSARNGKGIIESLLQQVLGCMFYQAPQSFLTACKAVSAGAASSHMMALRATGGRCVDAQMIKYISGGADISGRELFGKQTSFSPTAVPRANTNEMPIIKAEPAIMQRIEIIPCDAKFRTPGDAKFPYDANDKTHFIKNTKLRENLPVEAFLAVVVQAAKRWYEGGLGEKPACCKLACDAFAAENDTLQSWINDECELGPREGADPALILCSSAFSGYNNSRARQEPALPPIKKRDMHEQMAAKGFAKIDDYRKAHSQDNCKCVYAGLKSAGGY Sbjct: 1 MHTQKKCFRRPVIARHALKPILLSYPIGKFSHQTDHVISTTFFLLPSFESSMDIDDFDLRAAENGFIVDEEPPEEPPVPLATPPAXXXXXCAPRPSPKRNTSYARQKVQQYLAPSGQGIKGSHNGMDDMRGVFDVPNYETDADVRETFFTDIIEDLHRCGSPFVLMENICRLPDDAETRLRLDIDVEVPYKLNADHPLALTPAVAHKFCKTLWDVLHECTGISGASRFFVDAKGAPTPTVAGMWKHGVKITCSDIKCTHKDMLGIRQLMNDRYSAWGHEEWLDGKEAHEMQIIDPCIYENNGTMLHGAVKEKQQQHGGYKTVAVMGGDLHDLSFAELLRATSILHHDESTAKLQWRAGKEPVIVQRRGAKRTRRSAGAVALAAAAEHYTNKLTTADVQHIYEAAGGELQLQQIAGIRPGTISWREVSPGTDARVCLVPECAGSGHSDNALLIECYHGLKYKCCSTGKCLYLERWETEEDLLFGGDNGLARLFAKLRGHDVKNIGGDGDKARFIIYCEKTALWKPRYNSFVRCTEIPKLVAAYVEPRLQNLEPYLEAACAXXXXXXXXXXXXXXXXXELRDLKAKAASLFAIKESIKGTSKREAILKDVFSTIRDEDFEKLLDVNKDIFSCQNGVVELATATLRPRVRKDMLTRAVNIDYNADSPRIPEVMQLLTDITLAAPNRLNRPALLERLLRILGYSITGHVREEIIVFLLGCSARNGKGIIESLLQQVLGCMFYQAPQSFLTACKAVSAGAASSHMMALRATGGRCVDAQMIKYISGGADISGRELFGKQTSFSPTAVPRANTNEMPIIKAEPAIMQRIEIIPCDAKFRTPGDAKFPYDANDKTHFIKNTKLRENLPVEAFLAVVVQAAKRWYEGGLGEKPACCKLACDAFAAENDTLQSWINDECELGPREGADPALILCSSAFSGYNNSRARQEPALPPIKKRDMHEQMAAKGFAKIDDYRKAHSQDNCKCVYAGLKSAGGY 988
BLAST of jgi.p|Trimin1|349467 vs. uniprot
Match: A0A835Z1H9_9STRA (SF3 helicase domain-containing protein (Fragment) n=6 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1H9_9STRA) HSP 1 Score: 670 bits (1729), Expect = 1.420e-232 Identity = 344/366 (93.99%), Postives = 347/366 (94.81%), Query Frame = 1 Query: 1840 KDVFSTIRDEDFEKLLDVNKDIFSCQNGVVELATATLRPRVRKDMLTRAVNIDYNADSPRIPEVMQLLTDITLAAPNRLNRPALLERLLRILGYSITGHVREEIIVFLLGCSARNGKGIIESLLQQVLGCMFYQAPQSFLTACKAVSAGAASSHMMALRAT---------GGRCVDAQMIKYISGGADISGRELFGKQTSFSPTAVPRANTNEMPIIKAEPAIMQRIEIIPCDAKFRTPGDAKFPYDANDKTHFIKNTKLRENLPVEAFLAVVVQAAKRWYEGGLGEKPACCKLACDAFAAENDTLQSWINDECELGPREGADPALILCSSAFSGYNNSRARQEPALPPIKKRDMHEQMAAKGFAK 2910 KDVFST+RDEDFEKLLDVNKDIFSCQNGVVELATATLRPRVRKDMLTRAVNIDYNADSPRIPEVMQLLTDITLAAPNRLNRPALLERLLRILGYSITGHVREEIIVFLLG SARNGKGIIESLLQQVLGCMFYQAPQSFLTACKAVSAG+ASSHMMALR G +DAQMIKYISGGADISGRELFG QTSFSPTAVP ANTNEMPIIKAEPAIMQRIEIIPCDAKFRTPGDAKFPYDANDKTHFIKNTKLRENLPVEAFLA VVQAAKRWYEGGLGEKPACCKLACDAFAAENDTLQSWINDECELGPREGADPALILCSSAFSGYNN RARQEPALPPIKKRDMHEQMAAKGFAK Sbjct: 1 KDVFSTVRDEDFEKLLDVNKDIFSCQNGVVELATATLRPRVRKDMLTRAVNIDYNADSPRIPEVMQLLTDITLAAPNRLNRPALLERLLRILGYSITGHVREEIIVFLLGRSARNGKGIIESLLQQVLGCMFYQAPQSFLTACKAVSAGSASSHMMALRGARVVHLDELPAGVALDAQMIKYISGGADISGRELFGTQTSFSPTAVPWANTNEMPIIKAEPAIMQRIEIIPCDAKFRTPGDAKFPYDANDKTHFIKNTKLRENLPVEAFLAGVVQAAKRWYEGGLGEKPACCKLACDAFAAENDTLQSWINDECELGPREGADPALILCSSAFSGYNNYRARQEPALPPIKKRDMHEQMAAKGFAK 366
BLAST of jgi.p|Trimin1|349467 vs. uniprot
Match: A0A835Z1L1_9STRA (D5_N domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1L1_9STRA) HSP 1 Score: 183 bits (464), Expect = 6.260e-47 Identity = 121/338 (35.80%), Postives = 172/338 (50.89%), Query Frame = 1 Query: 1858 IRDEDFEKLLDVNKDIFSCQNGVVELATATLRPRVRKDMLTRAVNIDYNADSPRIPEVMQLLTDITLAAPNRLNRPALLERLLRILGYSITGHVREEIIVFLLGCSARNGKGIIESLLQQVLGCMFYQAPQSFLTACKAVSAGAASSHMMALRATGGRCVDAQ--------MIKYISGGADISGRELFGKQTSFSPTAVPRANTNEMPIIKAEPAIMQRIEIIPCDAK-FRTPGDAKFPYDANDKTHFIKNTKLRENLPVEAFLAVVVQAAKRWYEGGLGEKPACCKLACDAFAAENDTLQSWINDECELGPREGADPALI---LCSSAFSGYNNSRA 2835 +RD+ F LLD +KD+ S +GVV+L TATLRPRVR D L A++ ++ + P + + + + D+TL+ RL RP LE + R++GYSITGH REEIIV +G A N KG++ LL VL ++Y AP+S + AGAASS M AL VD + ++GGA I REL+ Q SF N N ++ A ++RI P D + + D + H + + K++ NL AF + V AK+WYE GLG P CC +N + WI + CE+G A + C+S G N + A Sbjct: 11 VRDKTFLNLLDADKDVLSVTDGVVDLRTATLRPRVRGDYLIYALSTPFDPEHPELHTIEKWMKDVTLS--ERLGRPEYLEFMQRLIGYSITGHTREEIIVMFIGNGA-NSKGVLHELLSDVLESLYYAAPRSIIVQTARGGAGAASSDMAALNGKRIGAVDEMPDEPLNDTQFRLLAGGAGIPARELYSAQASFKNLCQIILNFNFPVQMRITHATLRRIMACPFDMQALPVVPMSGAALDPTNPRHILLDIKMKGNLSRAAFFSWAVAGAKKWYEEGLGPHPKCCADLRSHIMDDNADVGMWIAERCEVGEGLMASTKMAWNDFCASRPEGNNITNA 345
BLAST of jgi.p|Trimin1|349467 vs. uniprot
Match: A0A3D2VPM9_9GAMM (SF3 helicase domain-containing protein n=1 Tax=Candidatus Competibacteraceae bacterium TaxID=2053538 RepID=A0A3D2VPM9_9GAMM) HSP 1 Score: 110 bits (274), Expect = 4.520e-21 Identity = 126/473 (26.64%), Postives = 190/473 (40.17%), Query Frame = 1 Query: 1474 GDNGLAR-LFAKLRGHDVKN----IGGDGDKARFIIYCEKTALWKPRYNSFVRCTEIPKLVA--------------AYVEPRLQNLEPYLEAACAXXXXXXXXXXXXXXXXXELRDLKAKAASLFAIKESIKGTSKREAILKDVFSTIRDEDFEKLLDVNKDIFSCQNGVVELATATLRPRVRKDMLTRAVNIDY--NADSPRIPEVMQLLTDITLAAPNRLNRPALLERLLRILGYSITGHVREEIIVFLLGCSARNGKGIIESLLQQVLGCMFYQAPQSFLTACK-----AVSAGAASSHMMALRATG-GRCVDAQMIKYISGGADISGRELFGKQTSFSPTAVPRANTNEMPIIKA-EPAIMQRIEIIPCDAKFRTPGDAKFPYDANDKTHFIKNTKLRENLPVE--AFLAVVVQAAKRWYEGGLGEKPACCKLACDAFAAENDTLQSWINDECELGPREGADPALILCS 2802 GD G A RG D N +G G RF +K LW Y +I +L A A ++ LQ + L A A L+ ++ L + ++GT+KR +L + + LD + + NG V+L T LRP R D+LT V I Y NA +P T L++ + R +GYS+TG VRE++++ G + NGK + ++L+++LG + QA L A K A ++ + TG GR + ++K ++GG I R + F+PT +TN P IK + AI +RI +IP + KF G+ + KN + L E LA V W GLG+ A + A + E D L +WI + C +G R A A + S Sbjct: 65 GDQGEAENALNPYRGTDDANADLLLGLHGADIRFCPPWDKWLLWSGSYWQIDNRLDIERLAADVPKVIRKRAIDLTAELQSLLQKMAELLAAINADPSRARLLTQERARLLERKLKLEDESEWLIKLASKLEGTAKRSCMLLATRHKVVIHHSD--LDKGHFLLNASNGTVDLTTGVLRPHERADLLTHDVEIPYLQNATAP----AWLAFLHSTFGGD-----ADLIQFVQRAVGYSLTGDVREQVLLICHGVGS-NGKSVFLNILRKLLGGLAIQAAPDLLMADKQRRHPTEQADLFGKRIIVCQETGEGRRFNETLVKQLTGGDGIRARRMHEDFWEFNPTHKLWLSTNHKPEIKGTDYAIWRRIRLIPFNVKFTDDGEPR------------KNPDMERQLTAELPGILAWAVAGCLDWQRNGLGKAEAV-EAATANYQQEMDVLAAWIGECCVVGKRFEAKAADLYAS 512
BLAST of jgi.p|Trimin1|349467 vs. uniprot
Match: A0A3C1SNC0_9GAMM (SF3 helicase domain-containing protein n=1 Tax=Candidatus Competibacteraceae bacterium TaxID=2053538 RepID=A0A3C1SNC0_9GAMM) HSP 1 Score: 101 bits (252), Expect = 3.310e-18 Identity = 86/315 (27.30%), Postives = 146/315 (46.35%), Query Frame = 1 Query: 1885 LDVNKDIFSCQNGVVELATATLRPRVRKDMLTRAVNIDYNADSPRIPEVMQLLTDITLAAPNRLNRPALLERLLRILGYSITGHVREEIIVFLLGCSARNGKGIIESLLQQVLGCMFYQAPQSFLTACK-----AVSAGAASSHMMALRATG-GRCVDAQMIKYISGGADISGRELFGKQTSFSPTAVPRANTNEMPIIKA-EPAIMQRIEIIPCDAKFRTPGDAKFPYDANDKTHFIKNTKLRENLPVEAFLAVVVQAAKRWYEGGLGEKPACCKLACDAFAAENDTLQSWINDECELGPREGADPALILCSSA 2808 LD + + + +NG ++L+ TLR R D+LT I Y D+ P + L+++ + L+ + R +GYS+TG VRE++++ G + NGK + ++++++LG + QA L A + A ++ + T GR + ++K ++GG I+ R +F +F PT +TN P I+ + AI +RI +IP + KF PG+ + D KL + +P +A V+ W GL P K A + E D L +W+ D C + A A + S A Sbjct: 444 LDKGRFLLNAKNGTIDLSAGTLRGHRRVDLLTHDTEIVYRPDAAA-PTWERFLSEVFDGDAD------LIRFVQRAVGYSLTGDVREQVLLICHG-NGSNGKSVFLNIVRKLLGKLALQAAPDLLMADRHRRHPTEQADLFGKRLVVCQETAEGRRFNEALVKQLTGGDAITARRMFEDNWTFEPTHKLWLSTNHRPEIRGTDHAIWRRIRLIPFNVKFHIPGEGEPVKDTG------MEAKLTDEMP--GIMAWAVRGCLDWQREGL-RAPEAVKAATANYQQEQDVLAAWLADCCIVKRTADAKAADLYGSYA 741
BLAST of jgi.p|Trimin1|349467 vs. uniprot
Match: A0A4P6JVW9_9CHLR (SF3 helicase domain-containing protein n=1 Tax=Ktedonosporobacter rubrisoli TaxID=2509675 RepID=A0A4P6JVW9_9CHLR) HSP 1 Score: 99.4 bits (246), Expect = 2.260e-17 Identity = 89/317 (28.08%), Postives = 140/317 (44.16%), Query Frame = 1 Query: 1903 IFSCQNGVVELATATLRPRVRKDMLTRAVNIDYNADSPRIPEVMQLLTDITLAAPNRLNRPALLERLLRILGYSITGHVREEIIVFLLGCSARNGKGIIESLLQQVLGCMFYQAPQSFLTACKAV-SAGAASSHMMALRATG---------GRCVDAQMIKYISGGADISGRELFGKQTSFSPTAVPRANTNEMPIIKA-EPAIMQRIEIIPCDAKFRTPGDAKFPYDANDKTHFIKNTKLRENLPVEAFLAVVVQAAKRWYEGGLGEKPACCKLACDAFAAENDTLQSWINDECELGPREGADPALILCSSAFSGY 2820 + + +GV++L T LRP +D + + P Q L +I P+R + A L+RL GYSITG E + L G RNGK + ++L++VLG T+ S GA + H+ L+ G C++ IK+++GG++IS R+L G+Q SF PT + TN P A + A +R +I D K R K Y+ + + K + LA +V+ RW + GL P+ L + + E D L ++I D C + P A + S ++ Y Sbjct: 570 LLATPSGVLDLRTGQLRPGRPEDFIRTVCPTKWTGLETPCPRFEQFLQEIFEDKPDRTSVIAFLQRLF---GYSITGLTCEAVFPILFGEEGRNGKDTLLNVLREVLGPHAGAVSHDVFTSSDRFRSGGAPTPHLCDLQGKRLIWGNETRQGECLNVAQIKWLTGGSEISARQLHGEQFSFQPTHLMLLMTNYKPQADARDKAFWERACLI--DFKMRFVDRPKETYERKKDSTLLGRLKAERS----GILAWLVRGCLRWQQVGLNT-PSSVLLWTERYREEEDNLLAFIGDCCIVRP-----DAEVRASELYNAY 871
BLAST of jgi.p|Trimin1|349467 vs. uniprot
Match: A0A1L9GPG1_9BURK (SF3 helicase domain-containing protein n=1 Tax=Polynucleobacter sp. MWH-Adler-W8 TaxID=1819727 RepID=A0A1L9GPG1_9BURK) HSP 1 Score: 94.7 bits (234), Expect = 4.540e-16 Identity = 98/376 (26.06%), Postives = 169/376 (44.95%), Query Frame = 1 Query: 1882 LLDVNKDIFSCQNGVVELATATLRPRVRKDMLTRAVNIDYNADSPRIPEVMQLLTDITLAAPNRLNRPALLERLLRILGYSITGHVREEIIVFLLGCSARNGKGIIESLLQQVLGCMFYQAPQSFL-------TACKAVSAGAASSHMMALRAT-GGRCVDAQMIKYISGGADISGRELFGKQTSFSPTAVPRANTNEMPIIKAEP-AIMQRIEIIPCDAKFRTPGDAKFPYDANDKTHFIKNTKLRENLPVEA--FLAVVVQAAKRWYEGGLGEKPACCKLACDAFAAENDTLQSWINDECELGPREGADPALILCSSAFSGYNN-SRARQEPALPPIKKRDMHEQMAAKGFAKIDDYRKAHSQDNCKCVYAGLK 2973 LL+ + + +NGVV+L T L ++T+ N +Y D+ + P+ ++ L ++ AL++ + R+LGY+ TG V EEI+V G A NGK ++ +++Q V G S L ++ ++ AG A ++L G +D Q++K ++G IS R L+ ++ P+ TN P++K + I +R+ +IP KF A+ D N L E L EA LA ++Q A +WY+GGL P K + E+D L ++ + E D A + + + Y + RA P+ K + +++ +G ++ N K Y G+K Sbjct: 462 LLNHDAYLLGVKNGVVDLKTGMLIQPNPTMLMTKQCNANYLTDT-QCPQWLKFLNEVFQG------NQALVDSIQRLLGYTFTGSVTEEIMVICYGFGA-NGKSVMSNVIQHVAGSYGKTGSPSLLKSRRDDDSSPRSDIAGLAGYRYISLNEMQSGDRLDEQVVKLLAGREAISARALYKDHMTYKPSGKAWLKTNHKPVVKEDDDGIWRRLVVIPFGRKF-----AEVERDPN----------LEEKLTQEADGILAWIIQGAVKWYQGGLSICPTI-KQESTEYRTESDLLGHFLEERVEFD-----DAARAIETDVYFFYQSWCRAN---GTNPLSKIRLTQKLKERGVRQLPS--------NGKRYYLGIK 797
BLAST of jgi.p|Trimin1|349467 vs. uniprot
Match: W4EVC0_9BACL (SF3 helicase domain-containing protein n=2 Tax=Viridibacillus TaxID=496496 RepID=W4EVC0_9BACL) HSP 1 Score: 93.6 bits (231), Expect = 9.870e-16 Identity = 98/374 (26.20%), Postives = 167/374 (44.65%), Query Frame = 1 Query: 1825 REAILKDVFSTIRDE--DFEKLLDVNKDIFSCQNGVVELATATLRPRVRKDMLTRAVNIDYNADSPRIPEVMQLLTDITLAAPNRLNRPALLERLLRILGYSITGHVREEIIVFLLGCSARNGKGIIESLLQQVLGCMFYQAPQSFLTACKAVSAG------AASSHMMALRATGGRCVDAQMIKYISGGADISGRELFGKQTSFSPTAVPRANTNEMPIIKA-EPAIMQRIEIIPCDAKFRTPGDAKFPYDANDKTHFIKNTKLRENLPVE--AFLAVVVQAAKRWYEGGLGEKPACCKLACDAFAAENDTLQSWINDECELGPREGADPALILCSSAFSGYNNSRARQ-EPALPPIKKRDMHEQMAAKGFAK 2910 RE+ +KD+ + + DF++ +K + + +NGVV+L T L+P R+ LT+ NI ++ +S + PE + L I L L+E + R++GYS+TG + E+I+VFL+G NGK + ++ ++G QA K A +S + A+ + G + +K I+GG + R L + F P TN P+IK + I +R++++ P + + P + D KL E L +E L ++ +W + GL E P K A + + D L ++ + C + D I + Y+N + E AL K R + + KGF K Sbjct: 400 RESAIKDLKILVPGDRSDFDR----HKYLLNIENGVVDLKTGKLQPHNRELSLTKMTNITFD-ESAKCPEWVSFLEQIFLGDKE------LIEYMQRLIGYSLTGEISEQIMVFLIG-GGSNGKSTFINTIKDIMGEYGKQAKSDTFIKKKETGANNDIARLVSSRFVSAIESEDGEQLSEAFVKQITGGEPVLARFLRQEYFEFIPEFKVFFTTNHKPVIKGVDEGIWRRVKLV--------PFNLQLPKEKRD-------LKLPEKLSLEMSGILNWAIEGCLKWQQSGLCE-PVIVKKATGDYKEDMDILGPFLYECCYVPM---IDEVKIEAKELYEIYSNWCYKTGEHAL---KNRAFYRMLETKGFKK 739
BLAST of jgi.p|Trimin1|349467 vs. uniprot
Match: A0A4U1J9R5_9DELT (SF3 helicase domain-containing protein n=1 Tax=Polyangium fumosum TaxID=889272 RepID=A0A4U1J9R5_9DELT) HSP 1 Score: 93.6 bits (231), Expect = 1.220e-15 Identity = 90/305 (29.51%), Postives = 134/305 (43.93%), Query Frame = 1 Query: 1879 KLLDVNKDIFSCQNGVVELATATLRPRVRKDMLTRAVNIDYNADSPRIPEVMQLLTDITLAAPNRLNRPALLERLLRILGYSITGHVREEIIVFLLGCSARNGKGIIESLLQQVLGCMFYQAPQSFLTACKAVSAGAASSHMMALRAT------GGRCVDAQMIKYISGGADISGRELFGKQTSFSPTAVPRANTNEMPIIKA-EPAIMQRIEIIP-CDAKFRTPGDAKFPYDANDKTHFIKNTKLRENLPVEAFLAVVVQAAKRWYEGGLGEKPACCKLACDAFAAENDTLQSWINDECELGPR 2769 ++LD + + + NG ++L T LRP R+D +T+ I Y DS + + D L ++ + R+ GYS+TG V E+++VFL G A NGK +LQ +LG QA L K + + + R GR IK ++GG I R + F PT N P ++ + I +RI ++P C P A DK + +K KL+ LP LA V+ W + GLGE P K A +A+ E DTL + D C +GP+ Sbjct: 547 EMLDTDPWLLNVDNGTLDLRTGQLRPHRREDRITKLTPITY--DSAATCPLWEAFLDCIFDKNKNL-----IDFVQRLFGYSLTGEVSEQVLVFLYGTGA-NGKSTFLLILQSLLGEYATQAAPELLLTKKGEAHPTEVADLFGRRVAVSTEVEAGRSWSEVQIKQLTGGDRIKARFMRKDFFEFQPTHKLFVAANHKPKVRGTDHGIWRRIRLVPFC---------VTIPEHARDK-NLVK--KLQAELP--GILAWAVRGCLAWQKDGLGE-PEEVKAATEAYREEMDTLGEFFADCCIVGPK 828
BLAST of jgi.p|Trimin1|349467 vs. uniprot
Match: A0A381R4E2_9ZZZZ (SF3 helicase domain-containing protein n=1 Tax=marine metagenome TaxID=408172 RepID=A0A381R4E2_9ZZZZ) HSP 1 Score: 93.2 bits (230), Expect = 1.430e-15 Identity = 77/311 (24.76%), Postives = 145/311 (46.62%), Query Frame = 1 Query: 1858 IRDEDFEKLLDVNKDIFSCQNGVVELATATLRPRVRKDMLTRAVNIDYNADSPRIPEVMQLLTDITLAAPNRLNRPALLERLLRILGYSITGHVREEIIVFLLGCSARNGKGIIESLLQQVLGCMFYQAPQSFLTACKAVSAGAASSHMMALRATGGRCVDAQ---------MIKYISGGADISGRELFGKQTSFSPTAVPRANTNEMPIIKAEPAIMQRIEIIPCDAKFRTPGDAKFPYDANDKTHFIKNTKLRENLPVEAFLAVVVQAAKRWYEGGLGEK-PACCKLACDAFAAENDTLQSWINDECEL 2760 + + DF+ +++ N D + +NG ++L T L R D T ++I+++ + + P + + ++DI L +N L +GYSITGH +E+ G NGK ++ LL + G ++ S + + K +AG A++H+ ++ +D ++K I+GG + R+L + VP TN P +PA+ +R+ +I +A+F + YD N+ H K++ + + L+ V+ A +WY+ G K P K F + + ++++ECEL Sbjct: 497 LNNPDFQDMINGNPDSIAVRNGNIDLRTGKLVNRRFDDYNTFFLDIEFD-EFMKTPNMDKFMSDIMLEQEEIINF------LSTFIGYSITGHNKEQKFSVWYGDKGSNGKSVLAKLLDKTFG-EYFTILDSEIFSVKKGTAGTATTHLNYIQDKRFGIMDESNKNEEMNEGLVKRITGGTKLRIRKLHKESELIEVVLVPIILTNFKPKFSNDPALFRRMILIEFEAQF-LDDETDIKYDKNNPRHKWKDSDIDNKISDNEVLSYFVRFATKWYQSGQKLKIPDKIKKYNKKFQHNCNVINKFLDNECEL 798 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|349467 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_9060 ID=mRNA_9060|Name=jgi.p|Trimin1|349467|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2991bp|location=Sequence derived from alignment at Contig_44:52905..56386+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. TCCTATTTCTCCTATTTTCCTATCATGCATACCCAGAAAAAGTGCTTCAGback to top protein sequence of jgi.p|Trimin1|349467 >Trimin1|349467|estExt_Genemark1.C_Ctg_440003 ID=Trimin1|349467|estExt_Genemark1.C_Ctg_440003|Name=jgi.p|Trimin1|349467|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=989bp MHTQKKCFRRPVIARHALKPILLSYPIGKFSHQTDHVISTTFFLLPSFESback to top mRNA from alignment at Contig_44:52905..56386+ Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_9060 ID=mRNA_9060|Name=jgi.p|Trimin1|349467|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=3482bp|location=Sequence derived from alignment at Contig_44:52905..56386+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_44:52905..56386+ >mRNA_9060 ID=mRNA_9060|Name=jgi.p|Trimin1|349467|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=2967bp|location=Sequence derived from alignment at Contig_44:52905..56386+ (Tribonema minus UTEX_B_3156 )back to top |