mRNA_9031 (mRNA) Tribonema minus UTEX_B_3156
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Overview
Homology
BLAST of jgi.p|Trimin1|348634 vs. uniprot
Match: A0A835Z1Z5_9STRA (Geranylgeranyl transferase type-2 subunit alpha n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1Z5_9STRA) HSP 1 Score: 681 bits (1756), Expect = 4.610e-247 Identity = 338/338 (100.00%), Postives = 338/338 (100.00%), Query Frame = 1
Query: 1 MHGRKKLDKPRSEEELAAIRAKVLNYSKVVAATNQLRRELLAHPSAQTQKTLLDVVDKVVRVNPDYYSMWNYRKEAALPILEAAEGQAKVGVQERRAQVVEQELALAAAAFKRNPKCYSAWHHRRWVLERGADAIGGEAAYRRELELCRQFLLLDSRNFHCWAYRGWVVEQAGLSAEEDFAFTTEKILENFSNYSAFHYRSKLLPAVAEARGAGGVLTLVEQELEMVHQAFFTEPDDQSAWWYHRFLVGWAAEALHGTEHHDKYPELLQKEVDCIRELLFVEERCKWALVTLHHLLCALARTAQDTEGVELMAEARSLVTTLVDVDPMHKSYYDSLLQ 1014
MHGRKKLDKPRSEEELAAIRAKVLNYSKVVAATNQLRRELLAHPSAQTQKTLLDVVDKVVRVNPDYYSMWNYRKEAALPILEAAEGQAKVGVQERRAQVVEQELALAAAAFKRNPKCYSAWHHRRWVLERGADAIGGEAAYRRELELCRQFLLLDSRNFHCWAYRGWVVEQAGLSAEEDFAFTTEKILENFSNYSAFHYRSKLLPAVAEARGAGGVLTLVEQELEMVHQAFFTEPDDQSAWWYHRFLVGWAAEALHGTEHHDKYPELLQKEVDCIRELLFVEERCKWALVTLHHLLCALARTAQDTEGVELMAEARSLVTTLVDVDPMHKSYYDSLLQ
Sbjct: 1 MHGRKKLDKPRSEEELAAIRAKVLNYSKVVAATNQLRRELLAHPSAQTQKTLLDVVDKVVRVNPDYYSMWNYRKEAALPILEAAEGQAKVGVQERRAQVVEQELALAAAAFKRNPKCYSAWHHRRWVLERGADAIGGEAAYRRELELCRQFLLLDSRNFHCWAYRGWVVEQAGLSAEEDFAFTTEKILENFSNYSAFHYRSKLLPAVAEARGAGGVLTLVEQELEMVHQAFFTEPDDQSAWWYHRFLVGWAAEALHGTEHHDKYPELLQKEVDCIRELLFVEERCKWALVTLHHLLCALARTAQDTEGVELMAEARSLVTTLVDVDPMHKSYYDSLLQ 338
BLAST of jgi.p|Trimin1|348634 vs. uniprot
Match: D8LK31_ECTSI (Geranylgeranyl transferase type-2 subunit alpha n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK31_ECTSI) HSP 1 Score: 283 bits (724), Expect = 2.030e-89 Identity = 162/383 (42.30%), Postives = 212/383 (55.35%), Query Frame = 1
Query: 1 MHGRKKLDKPRSEEELAAIRAKVLNYSKVVAATNQLRRELLAHPSAQTQKTLLDVVDKVVRVNPDYYSMWNYRKEAALPILEAAE------GQAKVG----------------VQER-RAQVVEQELALAAAAFKRNPKCYSAWHHRRWVLERGADAIGGEAAYRRELELCRQFLLLDSRNFHCWAYRGWVVEQAGLSAEEDFAFTTEKILENFSNYSAFHYRSKLLPAVAEARGAGGVLTLVEQELEMVHQAFFTEPDDQSAWWYHRFLVGWAAEALHGTEHHDKYPELLQKEVDCIRELLFVEERCKWALVTLHHLLCALART---------AQD-----------------TEGVELMAEARSLVTTLVDVDPMHKSYYD 1002
MHGRKK D P+++EE A+RAK+ NY KVV A R + Q ++ K++R++PDYYSMWN+RKEA L L E G + G VQE+ + ++ E+ELAL+ KRNPK Y AWHH +W LERG D +GG +A +L LC FL LD RNFHCWA+R WV E+ GLSA E+F FTT+KI +NFSNYSAFH+RSK+LP + E G L+ EL++ H A FTEP DQS WWYH FL+ WA + ++Y +L+ E + EL+ VE RCKWA V L + LA AQD TE E+ R + L ++DPMH +Y+
Sbjct: 1 MHGRKKSDLPQTKEEKDAVRAKISNYKKVVGAIRHKRA------TGQMDAEYKQLLGKLLRLHPDYYSMWNFRKEAVLAELSRIEDAHSRQGGSDDGDKAAEEISSGTLLSPSVQEQQKKKIYEEELALSVDCIKRNPKSYPAWHHHKWALERGLDLLGGRSALAGDLALCATFLELDGRNFHCWAHRMWVAERMGLSAREEFDFTTDKIKQNFSNYSAFHFRSKVLPRMVEEAGHDR-WQLLSDELDLTHDAMFTEPADQSVWWYHHFLLTWADDGTDSCSDSERYENILRAEAATLGELIEVEVRCKWAEVALLLVSQRLANALEPRPQPPRAQDXXXXXXXXXVTAAGNGSTEAGEVRESCRGMAARLSELDPMHGRFYE 376
BLAST of jgi.p|Trimin1|348634 vs. uniprot
Match: A0A0M0JE27_9EUKA (Geranylgeranyl transferase type-2 subunit alpha n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JE27_9EUKA) HSP 1 Score: 193 bits (490), Expect = 7.080e-55 Identity = 133/344 (38.66%), Postives = 179/344 (52.03%), Query Frame = 1
Query: 1 MHGRKKLDKPRSEEELAAIRA----KVLNYSKVVAATNQLRRELLAHPSAQTQKTLLDVVDKVVRVNPDYYSMWNYRKEAALPILEAAEGQAKVGVQERRAQVVEQELALAAAAFKRNPKCYSAWHHRRWVLERGADAIGGEAAYRR--ELELCRQFLLLDSRNFHCWAYRGWVVEQAGLSAEEDFAFTTEKILENFSNYSAFHYRSKLLPAVAEARGAGGVLTL---VEQELEMVHQAFFTEPDDQSAWWYHRFLVGWAAEALHGTEHHDKYPELLQKEVDCIRELLFVEERCKWALVTLHHLLCALARTAQDTEGVELMAEARSLVTTLVDVDPMHKSYYDS 1005
MHG K+ + E+ AA+R + +Y AA + RR + +A L+ V KVV NPD+ +MWN+R+E + A+ V R+A + E AL NPK Y W+HR WVL + GE ++ EL+L + L LD RNFHCW YR VV AG++AE + AFTT KI NFSNYSA+HYRSKLLPAV + GA G L + ELE+V AFFT P+D SAW+YHR+L+ A ++ L++ E+ + ELL +E CKW L L L +E E A + + L VD + YYDS
Sbjct: 1 MHGVKRF----TPEKRAALRKENEERAASYRSRSAAAME-RRAAKVYDAAS-----LEAVAKVVTENPDFATMWNFRREVLGHMFPDAD------VAARKAACLA-EFALTQECLGINPKSYPVWYHREWVL------LWGECEWQWPVELKLTAKLLALDDRNFHCWTYRRNVVRVAGVTAEAELAFTTTKIQANFSNYSAWHYRSKLLPAVHASAGAEGAAQLGAVLRNELELVRNAFFTAPEDSSAWFYHRWLIAQLAPGAAAALPPAEFEALVRAELQMVDELLELEPECKWPLAAAAFLGRTLDTHQMGSE--ETTGAAATRIGELRRVDALRARYYDS 319
BLAST of jgi.p|Trimin1|348634 vs. uniprot
Match: H3GF34_PHYRM (Geranylgeranyl transferase type-2 subunit alpha n=6 Tax=Phytophthora TaxID=4783 RepID=H3GF34_PHYRM) HSP 1 Score: 189 bits (481), Expect = 4.850e-54 Identity = 118/343 (34.40%), Postives = 190/343 (55.39%), Query Frame = 1
Query: 1 MHGR-KKLDKPRSEEELAAIR----AKVLNYSKVVAATNQLRRELLAHPSAQTQKTLLDVVDKVVRVNPDYYSMWNYRKEAALPILEAAEGQAKVGVQERRAQVVEQELALAAAAFKRNPKCYSAWHHRRWVLERGADAIGGEAAYRRELELCRQFLLLDSRNFHCWAYRGWVVEQAGLSAEEDFAFTTEKILENFSNYSAFHYRSKLLPAVAEARGAGGVLTLVEQELEMVHQAFFTEPDDQSAWWYHRFLVGWAAEALHGTEHHDKYPELLQKEVDCIRELLFVEERCKWALVTLHHLLCALARTAQDTEGVELMAEARSLVTTLVDVDPMHKSYYDSLLQ 1014
MHGR K +++ + +++ A R AKV Y +V ++R+ L PSA L + ++ +NP+++ +W+YR++ +++A +A+ ER ++ + EL L A +RNPK YSAW RRW++++G A ++E+ LC + L LD RNFHCW YR V + AG++ E+ AFTT+KI +NFSNYSA H+RS LP A ++ E+ +V QA FTEPDDQSAW+Y+R+L+ E + + L+ +V + ELL +E KW +VT+ L L + E ++ L + +DP H+ YY+ +++
Sbjct: 1 MHGRVKSVEREKEQQKTDAQRQEELAKVRMYHEVAGKVLAMKRQQLHEPSA------LPLTSHLLLLNPEFHVVWSYRRQ----VIDALAKRAQDPAAERH-EMAKTELKLTLDALQRNPKSYSAWFQRRWIVDQGL------ADLKKEIGLCDKLLELDERNFHCWNYRRHVCKLAGVAEEDQLAFTTQKIEQNFSNYSALHHRSITLPEPLTA-------DVLFDEIGLVQQAVFTEPDDQSAWFYYRWLLTSMVELVESSA--GDAVGFLKSQVQWLGELLEMETEAKWVVVTVADLHSRLGAITEVHGWEESKKQSVELYERAIALDPDHRRYYEDMMK 317
BLAST of jgi.p|Trimin1|348634 vs. uniprot
Match: A0A225WMF4_9STRA (Geranylgeranyl transferase type-2 subunit alpha n=3 Tax=Phytophthora TaxID=4783 RepID=A0A225WMF4_9STRA) HSP 1 Score: 188 bits (478), Expect = 1.350e-53 Identity = 112/343 (32.65%), Postives = 186/343 (54.23%), Query Frame = 1
Query: 1 MHGRKKL-----DKPRSEEELAAIRAKVLNYSKVVAATNQLRRELLAHPSAQTQKTLLDVVDKVVRVNPDYYSMWNYRKEAALPILEAAEGQAKVGVQERRAQVVEQELALAAAAFKRNPKCYSAWHHRRWVLERGADAIGGEAAYRRELELCRQFLLLDSRNFHCWAYRGWVVEQAGLSAEEDFAFTTEKILENFSNYSAFHYRSKLLPAVAEARGAGGVLTLVEQELEMVHQAFFTEPDDQSAWWYHRFLVGWAAEALHGTEHHDKYPELLQKEVDCIRELLFVEERCKWALVTLHHLLCALARTAQDTEGVELMAEARSLVTTLVDVDPMHKSYYDSLLQ 1014
MHGR K ++ +++E+ +KV Y +V ++R+ + PS +L + ++ +NP+++ +WNYR++A + + AE + ++ + EL L A +RNPK YSAW R+W+++RG + ++E+ LC + L LD RNFHCW YR V + AG+S ++ FTT+KI +NFSNYSA H+RS LP A +V +E+ +V QA FTEPDDQSAW+Y+R+LV E + + + L+ +V + EL +E KW +V L L + + + ++ L ++D+DP H+ YY+ +++
Sbjct: 1 MHGRVKSVEREKEQQKTDEQRQEELSKVRMYHEVAGKVLDMKRQQVYEPS------VLPLTSHLLLLNPEFHVVWNYRRQAIDALAQKAENP-----EAEMQEMAKTELKLTLDALQRNPKSYSAWFQRKWIIDRGLGDL------KKEIGLCDKLLNLDERNFHCWNYRRHVGKLAGMSEDDQLGFTTQKIEQNFSNYSALHHRSISLPDPLTA-------DVVFEEIGLVQQAVFTEPDDQSAWFYYRWLVTSMLELVESSA--EDTAGFLKSQVQWLDELQEMETEAKWVIVALADLHYRIGTITEVGGWEQSKKQSVDLYHRVIDLDPDHRRYYEDMIK 317
BLAST of jgi.p|Trimin1|348634 vs. uniprot
Match: M2Y9D7_GALSU (Geranylgeranyl transferase type-2 subunit alpha n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y9D7_GALSU) HSP 1 Score: 188 bits (477), Expect = 2.070e-53 Identity = 111/285 (38.95%), Postives = 164/285 (57.54%), Query Frame = 1
Query: 157 LDVVDKVVRVNPDYYSMWNYRKEAALPILEAAEGQAKVGVQERRAQVVEQELALAAAAFKRNPKCYSAWHHRRWVLERGADAIGG---EAAYRRELELCRQFLLLDSRNFHCWAYRGWVVEQAGLS-AEEDFAFTTEKILENFSNYSAFHYRSKLLPAVAEARGAGGVLTLVEQELEMVHQAFFTEPDDQSAWWYHRFLVGWAAEALHGTEHHDKYPELLQKEVDCIRELLFVEERCKWALVTLHHLLCALARTAQDTEGVELMAEARSLVTTLVDVDPMHKSYY 999
L +V++V+ +NPD YS+WNY K L +E QE Q+ + E L A R+PK YSAW HR ++L+ + E +++ELE+C + L LD RNFH WA+R V + GL + E+ F TE+I NFSNYSA+H+RS++LP + + + L V+++LE+V QA FTEP+DQSAW+Y R+L+ A D E+L+KE+ + ELL +E +CKWAL+T +LL D + E +++TTL +DP+ YY
Sbjct: 39 LSLVNRVLELNPDEYSLWNYHKRFVLNEIEKIMNYEPASFQEAAEQLFDSEFELTQRALYRHPKAYSAWQHRIFLLKTAKYHLPSKIYEGYFKKELEICAKLLDLDDRNFHGWAHRMRVGDIRGLQPSREELQFVTERIYGNFSNYSAWHHRSRILPILFKDQRDQYYLA-VQEDLELVKQAIFTEPEDQSAWFYFRWLLRGAPSYQTTVSVLDIDNEILKKELCILEELLTLEPKCKWALLTKFYLLQIFG----DFDNAE------TVLTTLQKLDPLRNGYY 312
BLAST of jgi.p|Trimin1|348634 vs. uniprot
Match: A0A485LCG0_9STRA (Geranylgeranyl transferase type-2 subunit alpha n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LCG0_9STRA) HSP 1 Score: 187 bits (474), Expect = 3.320e-53 Identity = 118/338 (34.91%), Postives = 181/338 (53.55%), Query Frame = 1
Query: 1 MHGRKKLDKPRSEEELAAIRAKVLNYSKVVAATNQLRRELLAHPSAQTQKTLLDVVDKVVRVNPDYYSMWNYRKEAALPILEAAEGQAKVGVQERRAQVVEQELALAAAAFKRNPKCYSAWHHRRWVLERGADAIGGEAAYRRELELCRQFLLLDSRNFHCWAYRGWVVEQAGLSAEEDFAFTTEKILENFSNYSAFHYRSKLLPAVAEARGAGGVLTLVEQELEMVHQAFFTEPDDQSAWWYHRFLVGWAAEALHGTEHHDKYPELLQKEVDCIRELLFVEERCKWALVTLHHLLCALARTAQDTEGVELMAEARSLVTTLVDVDPMHKSYYDSLLQ 1014
MHG +K D P++ EE AAI V Y +V + ++++ Q L + VV +NP+++ +W +R++A L +L A E R+ ++ + E+ L A +NPK YSAW R+W++++G A +E+ LC L D RNFHCW YR ++ + A + E++ AF +KI +NFSNYSA H R+ LPA L + ++E+EMV QA FTEP DQS W+Y+R+LV E E L +E I EL+ E + K A VTL H+L +T+ + L + + + T+LVD+D HK +Y+ L+
Sbjct: 1 MHGIRKSDVPKTPEEEAAIATHVKQYKEVSSQVMAMKKD------RQFDDHALKLSALVVVLNPEFWIIWAFRRDAILHLLRADES--------RKKELGDAEVKLTMEALMKNPKSYSAWFQRQWIVDQGM------ADLEKEIRLCDALLNKDERNFHCWNYRRYLSKLAKHAPEQNLAFAAQKITQNFSNYSALHQRTLSLPAPLS-------LDMFQEEVEMVKQAVFTEPYDQSNWFYYRWLV----------ESFPLDDERLAEETSWIEELVQEEPKAKLAWVTLAHVLEQGMKTSTSPDA--LQSRCKDIYTSLVDMDVDHKHFYEDRLR 299
BLAST of jgi.p|Trimin1|348634 vs. uniprot
Match: D0N0T5_PHYIT (Geranylgeranyl transferase type-2 subunit alpha n=15 Tax=Phytophthora TaxID=4783 RepID=D0N0T5_PHYIT) HSP 1 Score: 187 bits (476), Expect = 3.610e-53 Identity = 116/341 (34.02%), Postives = 182/341 (53.37%), Query Frame = 1
Query: 1 MHGR-KKLDKPRSEEELAAIR----AKVLNYSKVVAATNQLRRELLAHPSAQTQKTLLDVVDKVVRVNPDYYSMWNYRKEAALPILEAAEGQAKVGVQERRAQVVEQELALAAAAFKRNPKCYSAWHHRRWVLERGADAIGGEAAYRRELELCRQFLLLDSRNFHCWAYRGWVVEQAGLSAEEDFAFTTEKILENFSNYSAFHYRSKLLPAVAEARGAGGVLTLVEQELEMVHQAFFTEPDDQSAWWYHRFLVGWAAEALHGTEHHDKYPELLQKEVDCIRELLFVEERCKWALVTLHHLLCALARTAQDTEGVELMAEARSLVTTLVDVDPMHKSYYDSL 1008
MHGR K +++ + + + A R +KV Y +V ++R+ L PS +L + ++ +NP+++ +W+YR++A + + AE + + + EL L A +RNPK YSAW R+W+++RG + + E+ LC + L LD RNFHCW YR V + AG+S E AFTT+KI +NFSNYSA H+RS LP A ++ E+ +V QA FTEPDDQSAW+Y+R+L+ E + + + L+ +V + ELL +E KW +VTL L L+ + E + L + +DP H+ YY+ +
Sbjct: 12 MHGRVKSVEREKEQHKTDAQRQEELSKVRMYHEVAGKVLDMKRQQLYEPS------VLPLTSHLLLLNPEFHVVWSYRRQAIDALAQKAENP-----EAEMLTMAKTELKLTLDALQRNPKSYSAWFQRQWIIDRGLGDL------KMEIGLCDKLLNLDERNFHCWNYRRHVCKLAGVSKAEQLAFTTQKIEQNFSNYSALHHRSITLPEPLSA-------DVLFDEIGLVQQAVFTEPDDQSAWFYYRWLLTSMVELVESSA--EDASGFLKSQVQWLNELLEMESEAKWVVVTLADLQFRLSVITDVSGWEEAKKRSVGLYDRAIALDPDHRHYYEDM 326
BLAST of jgi.p|Trimin1|348634 vs. uniprot
Match: A0A8K1CD87_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CD87_PYTOL) HSP 1 Score: 187 bits (474), Expect = 6.250e-53 Identity = 124/352 (35.23%), Postives = 184/352 (52.27%), Query Frame = 1
Query: 1 MHGR----------KKLDKPRSEEELAAIRAKVLNYSKVVAATNQLRRELLAHPSAQTQKTLLDVVDKVVRVNPDYYSMWNYRKEAALPILEAAEGQAKVGVQERRA--QVVEQELALAAAAFKRNPKCYSAWHHRRWVLERGADAIGGEAAYRRELELCRQFLLLDSRNFHCWAYRGWVVEQAGLSAEEDFAFTTEKILENFSNYSAFHYRSKLLPAVAEARGAGGVLTLVEQELEMVHQAFFTEPDDQSAWWYHRFLVGWAAEALHGTEHHDKYPELLQKEVDCIRELLFVEERCKWALVTLHHLL--CALARTAQDTEGVELMAEARSLVTTLVDVDPMHKSYYDSLLQ 1014
MHGR KK D+ R EEL +R KV+A Q R L AH LL + V+ +NP+++ +W YR+E L +L+ A+ +E ++ + EL L A +R+PK YS+W R+W++++G ++E+ LC + L LD RNFHCW YR V + AG+S E++ AF T KI +NFSNYSA H+RS LP ++ E+ +V QA FTEPDDQSAW+Y+R+LV + + + E L ++ + ELL +E KW LVTL L ++A+T + + ++R L+ VDP H YY ++Q
Sbjct: 1 MHGRVKSVEREQEAKKTDEDR-REELTKVRMYHEVADKVLALRAQ--RVLAAH--------LLPLTSHVLLLNPEFHVIWGYRREILLSLLDK---HAQSATEEAMTPEEIAKTELKLTFEAIQRHPKSYSSWFQRQWIVDKGLCPD-----LKKEIALCNRLLDLDERNFHCWNYRRHVCQLAGVSREDELAFATLKIEQNFSNYSALHHRSITLPKPLTRE-------ILHDEIGIVQQAVFTEPDDQSAWFYYRWLVTSMLDVVQSEP--SEAVEFLDSQIQWLLELLEMESEAKWVLVTLADLQRRLSVAQTEDEASASQAKEQSRVYYKQLLSVDPDHAQYYRDMIQ 324
BLAST of jgi.p|Trimin1|348634 vs. uniprot
Match: W7TG25_9STRA (Geranylgeranyl transferase type-2 subunit alpha n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TG25_9STRA) HSP 1 Score: 188 bits (478), Expect = 1.200e-52 Identity = 139/404 (34.41%), Postives = 204/404 (50.50%), Query Frame = 1
Query: 1 MHGRKKLDKPR-----SEEELAAIRAKVLNYSKVVAATNQLRRELLAHPSAQTQKTLLD----VVDKVVRVNPDYYSMWNYRKE---AALPILEAAEG---QAKVGVQERRA--------QVVEQELALAAAAFKRNPKCYSAWHHRRWVLERGADAIGGEAA---------------------YRRELELCRQFLLLDSRNFHCWAYRGWVVEQ-AGLSAEEDFAFTTEKILENFSNYSAFHYRSKLL-PAVAEARGAGGVLTLVEQELEMVHQAFFTEPDDQSAWWYHRFLVGWAAEALHGTEHHDKYPE----------------LLQKEVDCIRELLFVEER----CKWALVTLHHLLCALARTAQD-TEGVELMAEARSLVTTLVDVDPMHKSYYDSLL 1011
MHGR+K + R S+ E A + KV Y +++ Q R+E+ A LD + +++R+NPD Y++WN+RKE A+ + + AEG + + ER ++ EL L ++NPK Y AWHHRRW+L+ A ++ AA +EL LC + L LD RNFHCW+YR WVV + + ++F F+T +IL+NFSNYSAFH+R+ + EA + +E+EL+MV QA FTEPDDQ+AWWYH+ L+ A TE + E +L+KEV +REL+ E +WA++TL LL LAR + +E L AE++ L+ L +DP H Y +L
Sbjct: 1 MHGRRKDEYQRTHLARSQAEKEAAKNKVFKYKQLMELALQQRQEMRHCKEALVTGEALDNDLVLSSQLLRINPDVYTLWNHRKEMIVASGVLRQEAEGGETEKEECESEREGGKAPLPPGSFLQTELDLVIDCIRKNPKSYGAWHHRRWLLDH-AFSLSPSAAPPNPSSPVAPLPALSRQLKPVLDQELFLCAKLLDLDERNFHCWSYRRWVVSKHPARTPRDEFEFSTSRILKNFSNYSAFHHRASYFWDYLREAHPNLDPPSFLERELDMVQQAVFTEPDDQTAWWYHQHLISLAL--AWDTEREKELGERGDQELTPRGVSFAQRVLEKEVKVLRELVEEGEAEGGGYRWAVLTLADLLGKLARRKEGKSEEASLRAESQKLLKRLPALDPDHAGRYQDML 401 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|348634 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_9031 ID=mRNA_9031|Name=jgi.p|Trimin1|348634|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1081bp|location=Sequence derived from alignment at Contig_28:877889..883114- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGCACGGCAGGAAGAAGCTGGATAAGCCTCGGTCCGAGGAGGAGCTAGCback to top protein sequence of jgi.p|Trimin1|348634 >Trimin1|348634|estExt_Genemark1.C_Ctg_280083 ID=Trimin1|348634|estExt_Genemark1.C_Ctg_280083|Name=jgi.p|Trimin1|348634|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=339bp MHGRKKLDKPRSEEELAAIRAKVLNYSKVVAATNQLRRELLAHPSAQTQKback to top mRNA from alignment at Contig_28:877889..883114- Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_9031 ID=mRNA_9031|Name=jgi.p|Trimin1|348634|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=5226bp|location=Sequence derived from alignment at Contig_28:877889..883114- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_28:877889..883114- >mRNA_9031 ID=mRNA_9031|Name=jgi.p|Trimin1|348634|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1017bp|location=Sequence derived from alignment at Contig_28:877889..883114- (Tribonema minus UTEX_B_3156 )back to top |