mRNA_9017 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|348627
Unique NamemRNA_9017
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|348627 vs. uniprot
Match: A0A835YXU8_9STRA (Sulfotransferase family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXU8_9STRA)

HSP 1 Score: 763 bits (1971), Expect = 7.800e-279
Identity = 365/365 (100.00%), Postives = 365/365 (100.00%), Query Frame = 1
Query:    1 MRTISFAACLGIALGASAPARQGARGLQQGHCDYTPAGYSGDVVAVCITKKACSKQPCGSGLPAVAKDGLCNDKSGAATGNGNLAMTAYRRIALVQLPGDLTDHLLVIPEHKLLFCFIAKNNCLSFNDLFRSLRERYDPSLAEGPNFGRNSYTNHNMTLEQLTEYVYDPAWHKAVFYREPLVRFVSAFRSKCVREPHAGNGVCQAEFGRKYPQFTEVVGRLARGPPVSNPHWRPQADFCGGLSGMLSEFQTIEPLDARTSREKVAKLLKQVGIEDPESIPAFNERFPPPDPKTGVWHPEESPFHTTNADSVVQEYYTPYLACTVFQYYLDDYLLFGIPAPAWTRKWDFHAQQWARVDCATLKEDT 1095
            MRTISFAACLGIALGASAPARQGARGLQQGHCDYTPAGYSGDVVAVCITKKACSKQPCGSGLPAVAKDGLCNDKSGAATGNGNLAMTAYRRIALVQLPGDLTDHLLVIPEHKLLFCFIAKNNCLSFNDLFRSLRERYDPSLAEGPNFGRNSYTNHNMTLEQLTEYVYDPAWHKAVFYREPLVRFVSAFRSKCVREPHAGNGVCQAEFGRKYPQFTEVVGRLARGPPVSNPHWRPQADFCGGLSGMLSEFQTIEPLDARTSREKVAKLLKQVGIEDPESIPAFNERFPPPDPKTGVWHPEESPFHTTNADSVVQEYYTPYLACTVFQYYLDDYLLFGIPAPAWTRKWDFHAQQWARVDCATLKEDT
Sbjct:    1 MRTISFAACLGIALGASAPARQGARGLQQGHCDYTPAGYSGDVVAVCITKKACSKQPCGSGLPAVAKDGLCNDKSGAATGNGNLAMTAYRRIALVQLPGDLTDHLLVIPEHKLLFCFIAKNNCLSFNDLFRSLRERYDPSLAEGPNFGRNSYTNHNMTLEQLTEYVYDPAWHKAVFYREPLVRFVSAFRSKCVREPHAGNGVCQAEFGRKYPQFTEVVGRLARGPPVSNPHWRPQADFCGGLSGMLSEFQTIEPLDARTSREKVAKLLKQVGIEDPESIPAFNERFPPPDPKTGVWHPEESPFHTTNADSVVQEYYTPYLACTVFQYYLDDYLLFGIPAPAWTRKWDFHAQQWARVDCATLKEDT 365          
BLAST of jgi.p|Trimin1|348627 vs. uniprot
Match: A0A835Z0T9_9STRA (Sulfotransferase family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0T9_9STRA)

HSP 1 Score: 503 bits (1294), Expect = 1.330e-176
Identity = 231/268 (86.19%), Postives = 246/268 (91.79%), Query Frame = 1
Query:  283 VQLPGDLTDHLLVIPEHKLLFCFIAKNNCLSFNDLFRSLRERYDPSLAEGPNFGRNSYTNHNMTLEQLTEYVYDPAWHKAVFYREPLVRFVSAFRSKCVREPHAGNGVCQAEFGRKYPQFTEVVGRLARGPPVSNPHWRPQADFCGGLSGMLSEFQTIEPLDARTSREKVAKLLKQVGIEDPESIPAFNERFPPPDPKTGVWHPEESPFHTTNADSVVQEYYTPYLACTVFQYYLDDYLLFGIPAPAWTRKWDFHAQQWARVDCATLK 1086
            VQLPGDL DHLLVIPEHKLLFC+IAKNNCLSFNDLFRSLRERYDPSLAEGP+FGRNSYTNHNMTLEQLTEY+YDP WHKAVFYREPLVRFVSA+RSKCVRE HAGN VCQ++FG K+P F  VV RL R PP+ NPHWRPQADFCGGLSG+LSEFQTIEPLDARTSREKVAKLLKQVGIEDPESIPAFNERFPPPDP+TGVW PE+SPFHTTNADSVV EYYTP+ ACTVFQYYLDD+LLFGIPAP WTR+WDFHAQ W   DC  L+
Sbjct:   41 VQLPGDLADHLLVIPEHKLLFCYIAKNNCLSFNDLFRSLRERYDPSLAEGPSFGRNSYTNHNMTLEQLTEYIYDPTWHKAVFYREPLVRFVSAYRSKCVREKHAGNEVCQSQFGIKHPLFKSVVKRLTREPPIENPHWRPQADFCGGLSGILSEFQTIEPLDARTSREKVAKLLKQVGIEDPESIPAFNERFPPPDPETGVWRPEQSPFHTTNADSVVAEYYTPFTACTVFQYYLDDFLLFGIPAPEWTRQWDFHAQHWTTGDCKPLQ 308          
BLAST of jgi.p|Trimin1|348627 vs. uniprot
Match: A0A835Z7D4_9STRA (Sulfotransferase family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7D4_9STRA)

HSP 1 Score: 303 bits (776), Expect = 6.390e-97
Identity = 146/270 (54.07%), Postives = 191/270 (70.74%), Query Frame = 1
Query:  289 LPGDLTDHLLVIPEHKLLFCFIAKNNCLSFNDLFRSLRERYDPSLAEGP-NFGRNSYTNHNMTLEQLTEYVYDPAWHKAVFYREPLVRFVSAFRSKCVREPHAGNGVCQAEFGRKY-PQFTEVVGRLARGPPVSNPHWRPQADFCGGLSGMLSEFQTIEPLDARTSREKVAKLLKQVGIEDPESIPAFNERFPPPDPKTGVWHPEESPFHTTNADSVVQEYYTPYLACTVFQYYLDDYLLFGIPAPAWTR--KWDFHAQQWARVDCATLK 1086
            +PGDL DH +++PEHKL+FCFIAK N  +FN LFRSLR RYDP +AEG   FG N+Y  HNMT+ Q+ E V++P+WHKAVFYREPLVRF+SA++SKC +       +C         P F ++V RL + P + NPHWRPQ DFCGGL+G++ + QT++ LD  TSR +V++LL+QVG+ DP  +P F  RFPP   + G         H+ +AD+ VQ+ Y+PYLAC VFQY++DDYLLFGIP PAWTR  KWDFH Q W+  DC +L+
Sbjct:  118 IPGDLMDHWIIVPEHKLMFCFIAKVNSAAFNQLFRSLRSRYDPQMAEGKVAFGLNNYLYHNMTVSQVAELVHNPSWHKAVFYREPLVRFLSAWKSKCEKGVIRDLSMCADVLHMSVAPDFPQIVERLWQSPRIVNPHWRPQVDFCGGLTGIIDQIQTVKRLDLTTSRAEVSELLQQVGV-DPADVPMFETRFPPLMQEEGSDGAGLHWDHSFHADASVQQAYSPYLACRVFQYFIDDYLLFGIPVPAWTRQHKWDFHRQNWSSGDCESLR 386          
BLAST of jgi.p|Trimin1|348627 vs. uniprot
Match: A0A835Z974_9STRA (Sulfotransferase family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z974_9STRA)

HSP 1 Score: 307 bits (787), Expect = 1.110e-95
Identity = 167/329 (50.76%), Postives = 199/329 (60.49%), Query Frame = 1
Query:  286 QLPGDLTDHLLVIPEHKLLFCFIAKNNCLSFNDLFRSLRERYDPSLA---------------EGPNFGRNSYTNHNMTLEQLTEYVYDPAWHKAVFYREPLVRFVSAFRSKCVREPHAGNGVCQAEFGR-KYPQFTEVVGRL---ARGPPVSNPHWRPQADFCGGLSGMLSEFQTIEPLDARTSREKVAKLLKQVGIEDP-------------------ESIPAFNERFPPPDPKTGVWHPEESPF--HTTNADSVVQEYYTPYLACTVFQYYLDDYLLFGIPAPA-----------------------------WTRKWDFHAQQWAR 1065
            +L GDL DHL+V+PEHKLLFCFIAK N L+FNDLFRSLRER+DPS+                +   FGRN+Y  HN++LE+LT+ VYDP+WHKAVFYREPLVRFVSA+RSKC R+      +C+  FG  K+P+F+ V  RL   A  P  +NPHWRPQ +FCGGL+  L+E+QT+E LDAR SRE VAKLL  +G+ DP                   ESIP FN  FPPPD       P+  P   H T+AD  VQ YYTP  ACTV +YYLDDYLLFG+P PA                             WTR W FHAQ WAR
Sbjct:  219 RLSGDLVDHLIVVPEHKLLFCFIAKCNSLAFNDLFRSLRERHDPSMNTPESXXXXXXXXMADDSVKFGRNTYAYHNLSLEELTDRVYDPSWHKAVFYREPLVRFVSAYRSKCDRDSQEDGVLCKRVFGLGKHPRFSAVTQRLSDAAAHPIDANPHWRPQTEFCGGLAETLAEYQTVEALDARDSRENVAKLLSDIGVADPPNFNKXXXXXXXXXXXXXXESIPVFNLHFPPPDAG-----PDAGPHNHHATHADDKVQRYYTPRRACTVVRYYLDDYLLFGVPVPALRRAAGRAIAXXXXXXXXXXXXXXXXXXXWTRSWKFHAQHWAR 542          
BLAST of jgi.p|Trimin1|348627 vs. uniprot
Match: A0A835Z3G3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3G3_9STRA)

HSP 1 Score: 295 bits (755), Expect = 5.800e-94
Identity = 153/328 (46.65%), Postives = 179/328 (54.57%), Query Frame = 1
Query:  364 NCLSFNDLFRSLRERYDPSLAEGPNFGRNSYTNHNMTLEQLTEYVYDPAWHKAVFYREPLVRFVSAFRSKCVREPHAGNGVCQAEFGRKYPQFTEVVGRLARGPPVSNPHWRPQADFCGGLSGMLSEFQTIEP--------------------------------------------------------------------------------------LDARTSREKVAKLLKQVGIEDPESIPAFNERFPPPDPKTGVWHPEE-SPFHTTNADSVVQEYYTPYLACTVFQYYLDDYLLFGIPAPAWTRKWDFHAQQWARVDCATLK 1086
            NCL+FN LF SLR RYDPSL EGP + R S+  H + L+ LT  +YDP WHKAVFYREPL RF+SA+RSKC      G  +C+ EFG+  P F E V RL   P + NPHWRPQ DFC GLS + S+F  +                                                                                        LDARTSR+KV +LL +VGIED E+IPAFNERFPP DP+TG W P      HTTNA+S V+ YYTPYLAC VFQY++DDY+LFGIP PAWTRKWDFHAQ WA  DCATL+
Sbjct:   42 NCLAFNKLFNSLRSRYDPSLLEGPAWNRTSHVQHRIKLKTLTRMIYDPTWHKAVFYREPLARFLSAYRSKCESGHDDGAELCEQEFGKPNPTFEEAVERLVTQPYIWNPHWRPQVDFCSGLSAITSQFLALNAITDAQSSNCAHYRERSRMPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMPPHPHCHTAVNAHAXXXXXXXXXXXXXXXXXXXXXXLDARTSRDKVTQLLHRVGIEDAETIPAFNERFPPLDPETGEWRPHALHSNHTTNAESAVEAYYTPYLACRVFQYFIDDYILFGIPVPAWTRKWDFHAQHWATADCATLR 369          
BLAST of jgi.p|Trimin1|348627 vs. uniprot
Match: A0A835YPV5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPV5_9STRA)

HSP 1 Score: 281 bits (719), Expect = 2.340e-90
Identity = 138/246 (56.10%), Postives = 167/246 (67.89%), Query Frame = 1
Query:  352 IAKNNCLSFNDLFRSLRERYDPSLAEGPNFGRNSYTNHNMTLEQLTEYVYDPAWHKAVFYREPLVRFVSAFRSKCVREPHAGNGVCQAEFGRKYPQFTEVVGRLARGPPVSNPHWRPQADFCGGLSGMLSEFQTIEPLDARTSREKVAKLLKQVGIEDPESIPAFNERFPPPDPKTGVWHPEES-PFHTTNADSVVQEYYTPYLACTVFQYYLDDYLLFGIPAPAWTRKWDFHAQQWARVDCATLK 1086
            + +NNC SFN LF SLR RYD SL EG  +GRN   +HNMTL QL + VYD  WHKAVFYREPLVR++SA+RSKC      G  +C A FG+  P F E V RL + PPV NPH+RPQ DFCGGL  +L +FQT+E LD RTSR+ VA LL++VG+ DPE +PAFNERFPP D   G W P +S   HTT+A + V+ YYTPYLAC V  ++LDDYL FG+  P W   W    +     DCA L+
Sbjct:    2 LFQNNCQSFNHLFTSLRSRYDESLLEGDIWGRNDMHSHNMTLPQLADLVYDDTWHKAVFYREPLVRYLSAYRSKCEVGHDDGFELCTALFGKPNPTFAEAVERLTQDPPVDNPHFRPQVDFCGGLGAILPQFQTVEALDPRTSRDAVAALLRRVGVADPEGVPAFNERFPPFDAAAGAWRPNDSYARHTTDAAAAVEAYYTPYLACVVVTHFLDDYLTFGVAVPEWA--WRLGLRD-VGGDCAALR 244          
BLAST of jgi.p|Trimin1|348627 vs. uniprot
Match: A0A836CJ81_9STRA (Sulfotransferase family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ81_9STRA)

HSP 1 Score: 270 bits (690), Expect = 7.550e-85
Identity = 140/292 (47.95%), Postives = 179/292 (61.30%), Query Frame = 1
Query:  298 DLTDHLLVIPEHKLLFCFIAKNNCLSFNDLFRSLRERYDPSLAEGPNFGR------NSYTNHNMTLEQLTEYVYDPAWHKAVFYREPLVRFVSAFRSKCVREPHA-----------------GNGVCQAEFGRKYPQFTEVVGRLARGPPVSNPHWRPQADFCGGLSGMLSEFQTIEPLDARTSREKVAKLLKQVGIEDPESI--PAFNERFPPP---DPKTGVWHPEESPFHTTNADSVVQEYYTPYLACTVFQYYLDDYLLFGIPAPAWTRKWDFHAQQWARVDCATLKE 1089
            DL DHL+V+PE+K++FC IAK + ++FNDLFRSLR  +DPS+ EG  FGR      NSY +HN +L+ LT+ V D  W KAVFYREPL RFVSA++ KC R P                   G+  C   FG+++P FTEVV RL + P + N HWRPQ +FCG L  ++ EF  +E LD RTSREKV +LL    + D + +   AFN  FP     DP        E  +HTTNAD+ V  YYT YLAC VFQYY DDY+LF +  P W R+W F+   W   DC+TL++
Sbjct:   33 DLADHLIVVPEYKIIFCSIAKVSSVAFNDLFRSLRAPFDPSMLEGTRFGRIIPFGRNSYASHNWSLQNLTQAVNDRDWVKAVFYREPLTRFVSAYKEKCERRPPGNRQLLGWSPLALPPRPPGSSFCSRIFGQRHPTFTEVVERLQQQPRIENAHWRPQHEFCG-LRNIIQEFNFVELLDRRTSREKVVELLSAARVPDLKFMNDTAFNAHFPAAAAGDPSVAA----EPKWHTTNADATVDSYYTRYLACIVFQYYYDDYVLFEMDVPVWARQWGFYVDGWEMKDCSTLRD 319          
BLAST of jgi.p|Trimin1|348627 vs. uniprot
Match: A0A836CJZ7_9STRA (Sulfotransferase family-domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJZ7_9STRA)

HSP 1 Score: 264 bits (675), Expect = 3.450e-82
Identity = 137/280 (48.93%), Postives = 167/280 (59.64%), Query Frame = 1
Query:  295 GDLT-DHLLVIPEHKLLFCFIAKNNCLSFNDLFRSLRERYDPSLAEGPN------FGRNSYTNHNMTLEQLTEYVYDPAWHKAVFYREPLVRFVSAFRSKCVREPHAGNG-------------------------VCQAEFGRKYPQFTEVVGRLARGPPVSNPHWRPQADFCGGLSGMLSEFQTIEPLDARTSREKVAKLLKQVGIEDPESIPAFNERFPPPDPKTGVWHPEESPFHTTNADSVVQEYYTPYLACTVFQYYLDDYLLFGIPAPAWTRKW 1038
            GD   DHLL++PE+KL+FCFIAK + LSFNDL RSLR  +DP + EG        FGRNSY +HN +L+ LT+ ++DPAW KAVFYREPL RFVSA+R KC +  H   G                         +C   FG  +P F  VV RL R P V++PHWR Q +FCGGL   + EFQ +E L+  TSREKV +LL +  + +  S  AFN RFPP  P      P     H TNAD+  + YYTPYLAC VFQYY DDY LFG+  P W R W
Sbjct:   79 GDFALDHLLIVPEYKLIFCFIAKVSSLSFNDLLRSLRAPFDPGMLEGEAYGRIIPFGRNSYRSHNWSLQDLTDALHDPAWLKAVFYREPLTRFVSAYRDKCGKRTHGARGLPPRNRRRRAWSPLHERKANHKHDKICLRSFGEDWPSFETVVDRLLREPRVTDPHWRRQHEFCGGLDRFIGEFQFVEVLERATSREKVGELLARAHVPNFNSDAAFNLRFPPTAPGDASRDP-----HATNADAAARSYYTPYLACVVFQYYYDDYALFGMQLPEWARAW 353          
BLAST of jgi.p|Trimin1|348627 vs. uniprot
Match: A0A835Z948_9STRA (Sulfotransferase family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z948_9STRA)

HSP 1 Score: 231 bits (590), Expect = 1.900e-68
Identity = 132/286 (46.15%), Postives = 165/286 (57.69%), Query Frame = 1
Query:  235 TGNGNLAMTAYRRIALVQLPGDLTDHLLVIPEHKLLFCFIAKNNCLSFNDLFRSLRERYDPSLAEGPNFGR-NSYTNHNMTLEQLTEYVYDPAWHKAVFYREPLVRFVSAFRSKCVREPHAGNGVCQAEFGRKYPQFTEVVGRLARGPPVSNPHWRPQADFCGGLSGMLSEFQTIEPLDARTSREKVAKLLKQVGIEDPESIPAFNERFPPP--------------------DPKTGVWHPEESPFHTTNADSVVQEYY-TPYLACTVFQYYLDDYLLFGIPAPAW 1026
            TG+G    TA    A   +  +L  H +++PE KLLFCFI K  C SFNDLFRS R R+DP  A+G    R N+   HNM+   +   V D  WHKAVF+REPL RF+SAFRSKC          C   FG K P F   + RL + PP+++ HWRPQ+DFCGGL   LS FQT+E LD  TS EKV+ LL  +G++ PESIPAF+  FP P                      K G   P E+  H T+A   +++YY +P +AC V QYY+DDYLLFGI  P W
Sbjct:   29 TGDG--VTTAAHVTAPAPVMDNLYQHWIIVPEIKLLFCFIEKVGCESFNDLFRSYRSRWDPRQAKGRKPWRLNNMKAHNMSEADVDRLVLDETWHKAVFFREPLERFLSAFRSKCEPGHDTDREHCTDTFGSKDPPFAVAIDRLRQAPPITDAHWRPQSDFCGGLPSKLSHFQTVEQLDPATSHEKVSALLHTLGVQ-PESIPAFHRHFPRPASSVADSSGTXXXXXXXXGAKQKAGAV-PNET--HLTHAADALRKYYLSPAMACAVVQYYIDDYLLFGIALPQW 308          
BLAST of jgi.p|Trimin1|348627 vs. uniprot
Match: A0A835YYQ7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYQ7_9STRA)

HSP 1 Score: 187 bits (476), Expect = 3.200e-54
Identity = 93/178 (52.25%), Postives = 116/178 (65.17%), Query Frame = 1
Query:  277 ALVQLPGDLTDHLLVIPEHKLLFCFIAKNNCLSFNDLFRSLRERYDPSLAEGPNFGRNSYTNHNMTLEQLTEYVYDPAWHKAVFYREPLVRFVSAFRSKCVREPH--AGNGVCQAEFGRKYPQFTEVVGRLARGPPVSNPHWRPQADFCGGLSGMLSEFQTIEPLDARTSREKVAKLL 804
            +L+    +L +  +++PEHKLLFCFI K  C SFN LF+SLR RYDP+ A    +G N+ T HN+T   +  YV DP WHKAVFYREPLVRF+SAFRSKC  EPH       C A FG + P F   V RL++  P+++ HWR Q  FCGGL   L  FQT+E LDA TSR+K  + L
Sbjct:   41 SLLDGKSNLYNKWIIVPEHKLLFCFIEKVGCKSFNQLFKSLRARYDPTQAAAGVWGSNNMTAHNLTEADIDAYVEDPLWHKAVFYREPLVRFLSAFRSKC--EPHHDGDRQHCTATFGSEQPPFAAAVDRLSQQQPITDAHWRRQIHFCGGLQSKLVHFQTVEQLDAITSRQKCTRCL 216          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|348627 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YXU8_9STRA7.800e-279100.00Sulfotransferase family-domain-containing protein ... [more]
A0A835Z0T9_9STRA1.330e-17686.19Sulfotransferase family-domain-containing protein ... [more]
A0A835Z7D4_9STRA6.390e-9754.07Sulfotransferase family-domain-containing protein ... [more]
A0A835Z974_9STRA1.110e-9550.76Sulfotransferase family-domain-containing protein ... [more]
A0A835Z3G3_9STRA5.800e-9446.65Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YPV5_9STRA2.340e-9056.10Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CJ81_9STRA7.550e-8547.95Sulfotransferase family-domain-containing protein ... [more]
A0A836CJZ7_9STRA3.450e-8248.93Sulfotransferase family-domain-containing protein ... [more]
A0A835Z948_9STRA1.900e-6846.15Sulfotransferase family-domain-containing protein ... [more]
A0A835YYQ7_9STRA3.200e-5452.25Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_28contigContig_28:694776..699483 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|348627|estExt_Genemark1.C_Ctg_280068
BRITEko00000,ko00001,ko01000,ko01003
KEGG rclassRC00007,RC00231
KEGG ReactionR02180,R10873
KEGG Pathwayko00513,ko00515,ko00532,ko01100,map00513,map00515,map00532,map01100
KEGG koko:K01017,ko:K04742,ko:K07779,ko:K08105,ko:K09672,ko:K09673,ko:K09674
EC2.8.2.35,2.8.2.5
GOsGO:0000139,GO:0000166,GO:0000902,GO:0000904,GO:0001501,GO:0001537,GO:0002062,GO:0002063,GO:0003008,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005794,GO:0006022,GO:0006023,GO:0006024,GO:0006029,GO:0006082,GO:0006508,GO:0006518,GO:0006790,GO:0006807,GO:0006928,GO:0006935,GO:0007155,GO:0007275,GO:0007399,GO:0007409,GO:0007411,GO:0007417,GO:0007517,GO:0007585,GO:0007610,GO:0007611,GO:0007612,GO:0007613,GO:0007616,GO:0008045,GO:0008146,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009605,GO:0009653,GO:0009790,GO:0009791,GO:0009792,GO:0009887,GO:0009888,GO:0009966,GO:0009968,GO:0009987,GO:0010467,GO:0010646,GO:0010648,GO:0010817,GO:0010941,GO:0012505,GO:0016020,GO:0016021,GO:0016043,GO:0016053,GO:0016232,GO:0016485,GO:0016486,GO:0016740,GO:0016782,GO:0017015,GO:0017076,GO:0017144,GO:0019538,GO:0019752,GO:0022008,GO:0022610,GO:0023051,GO:0023057,GO:0030030,GO:0030154,GO:0030166,GO:0030173,GO:0030182,GO:0030203,GO:0030204,GO:0030205,GO:0030206,GO:0030208,GO:0030326,GO:0030512,GO:0030554,GO:0031090,GO:0031175,GO:0031224,GO:0031228,GO:0031300,GO:0031301,GO:0031984,GO:0032501,GO:0032502,GO:0032553,GO:0032555,GO:0032559,GO:0032787,GO:0032989,GO:0032990,GO:0033036,GO:0033037,GO:0034481,GO:0034641,GO:0034645,GO:0035107,GO:0035108,GO:0035113,GO:0036094,GO:0036342,GO:0040007,GO:0040011,GO:0042127,GO:0042221,GO:0042301,GO:0042330,GO:0042445,GO:0042446,GO:0042733,GO:0042981,GO:0043009,GO:0043066,GO:0043067,GO:0043069,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0043603,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044272,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044444,GO:0044446,GO:0044464,GO:0046394,GO:0047756,GO:0048468,GO:0048513,GO:0048519,GO:0048523,GO:0048562,GO:0048568,GO:0048583,GO:0048585,GO:0048589,GO:0048598,GO:0048666,GO:0048667,GO:0048699,GO:0048701,GO:0048703,GO:0048704,GO:0048705,GO:0048706,GO:0048731,GO:0048736,GO:0048812,GO:0048856,GO:0048858,GO:0048869,GO:0050650,GO:0050651,GO:0050654,GO:0050655,GO:0050656,GO:0050659,GO:0050789,GO:0050794,GO:0050877,GO:0050890,GO:0050896,GO:0051179,GO:0051216,GO:0051604,GO:0060173,GO:0060548,GO:0061061,GO:0061448,GO:0061564,GO:0065007,GO:0065008,GO:0071704,GO:0071840,GO:0072330,GO:0090092,GO:0090101,GO:0090287,GO:0090288,GO:0097159,GO:0097367,GO:0097485,GO:0098588,GO:0098791,GO:0120036,GO:0120039,GO:1901135,GO:1901137,GO:1901265,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901681,GO:1903510,GO:1903844,GO:1903845,GO:1904888
Preferred nameCHST10
Descriptionchondroitin 4-sulfotransferase activity
COG categoryM
Max annot lvl2759|Eukaryota
EggNOG OGsKOG4651@1|root,KOG4651@2759|Eukaryota
Evalue1.61e-10
Seed ortholog44056.XP_009035545.1
Hectar predicted targeting categorysignal peptide
TranscriptId348949
TrackFilteredModels1
ProteinId348627
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|348627gene_9017Tribonema minus UTEX_B_3156 geneContig_28 694776..699483 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|348627Trimin1|348627|estExt_Genemark1.C_Ctg_280068Tribonema minus UTEX_B_3156 polypeptideContig_28 694776..699405 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_9017_1exon_9017_1Tribonema minus UTEX_B_3156 exonContig_28 694776..694842 +
exon_9017_2exon_9017_2Tribonema minus UTEX_B_3156 exonContig_28 696799..696991 +
exon_9017_3exon_9017_3Tribonema minus UTEX_B_3156 exonContig_28 698023..698050 +
exon_9017_4exon_9017_4Tribonema minus UTEX_B_3156 exonContig_28 698596..699483 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_9017CDS_9017Tribonema minus UTEX_B_3156 CDSContig_28 694776..694842 +


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR3_9017UTR3_9017Tribonema minus UTEX_B_3156 three_prime_UTRContig_28 699406..699483 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_9017 ID=mRNA_9017|Name=jgi.p|Trimin1|348627|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1176bp|location=Sequence derived from alignment at Contig_28:694776..699483+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGAGGACCATCAGTTTTGCTGCGTGCTTGGGTATTGCGCTGGGGGCCAG
TGCTCCGGCTCGTCAAGGCGCACGGGGGCTGCAGCAGGGCCACTGCGACT
ACACCCCTGCAGGCTACTCCGGAGACGTGGTTGCGGTGTGCATCACCAAG
AAGGCGTGCAGCAAGCAGCCTTGCGGTTCCGGCCTTCCTGCTGTCGCAAA
GGATGGATTGTGCAACGACAAGTCGGGCGCCGCCACTGGCAACGGCAACC
TCGCAATGACCGCCTACCGCCGCATCGCACTGGTGCAGCTTCCTGGTGAC
CTCACCGACCACCTGCTAGTAATACCGGAGCACAAGCTGCTGTTCTGTTT
CATTGCGAAGAACAACTGCTTGTCGTTCAACGATCTGTTCCGATCACTGC
GGGAGCGCTACGACCCCAGCCTAGCGGAGGGTCCCAATTTCGGCCGCAAC
AGCTACACCAACCACAACATGACCCTAGAGCAGCTGACAGAGTATGTATA
CGACCCCGCCTGGCACAAGGCCGTCTTTTACAGGGAGCCGCTTGTCCGGT
TTGTCTCGGCGTTTCGGTCCAAGTGCGTGAGGGAACCGCACGCCGGCAAT
GGAGTGTGCCAGGCGGAGTTCGGCCGCAAGTACCCGCAATTCACGGAAGT
CGTGGGGCGCCTGGCCCGGGGACCCCCTGTGAGCAACCCCCACTGGCGCC
CGCAGGCCGATTTCTGCGGGGGCCTGAGTGGCATGCTGTCCGAGTTTCAG
ACGATCGAGCCCCTGGACGCTCGCACTTCGCGCGAGAAAGTGGCGAAACT
GCTCAAGCAGGTAGGTATCGAGGACCCTGAGAGCATACCCGCATTCAACG
AGCGCTTCCCCCCGCCGGACCCCAAAACGGGGGTTTGGCATCCCGAGGAG
TCCCCCTTTCACACCACCAATGCGGATAGCGTGGTGCAGGAGTACTATAC
GCCCTACCTTGCCTGCACTGTGTTCCAGTACTATTTAGACGATTACCTGT
TGTTTGGCATCCCCGCGCCCGCATGGACGAGGAAGTGGGATTTTCACGCG
CAGCAGTGGGCCAGGGTTGATTGCGCCACGCTGAAGGAGGACACCTGAGG
TGATGCTGCGGTATGTAGCTTTTTGTGCTTTACGCGCCAAGTCTGTTGTT
TCAGTTAAATAAACTGCTGTTCTGCT
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protein sequence of jgi.p|Trimin1|348627

>Trimin1|348627|estExt_Genemark1.C_Ctg_280068 ID=Trimin1|348627|estExt_Genemark1.C_Ctg_280068|Name=jgi.p|Trimin1|348627|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=366bp
MRTISFAACLGIALGASAPARQGARGLQQGHCDYTPAGYSGDVVAVCITK
KACSKQPCGSGLPAVAKDGLCNDKSGAATGNGNLAMTAYRRIALVQLPGD
LTDHLLVIPEHKLLFCFIAKNNCLSFNDLFRSLRERYDPSLAEGPNFGRN
SYTNHNMTLEQLTEYVYDPAWHKAVFYREPLVRFVSAFRSKCVREPHAGN
GVCQAEFGRKYPQFTEVVGRLARGPPVSNPHWRPQADFCGGLSGMLSEFQ
TIEPLDARTSREKVAKLLKQVGIEDPESIPAFNERFPPPDPKTGVWHPEE
SPFHTTNADSVVQEYYTPYLACTVFQYYLDDYLLFGIPAPAWTRKWDFHA
QQWARVDCATLKEDT*
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mRNA from alignment at Contig_28:694776..699483+

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_9017 ID=mRNA_9017|Name=jgi.p|Trimin1|348627|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=4708bp|location=Sequence derived from alignment at Contig_28:694776..699483+ (Tribonema minus UTEX_B_3156 )
ATGAGGACCATCAGTTTTGCTGCGTGCTTGGGTATTGCGCTGGGGGCCAG TGCTCCGGCTCGTCAAGGTGAGCGAAGGAACAGTCTCGTTGACAAACGTC TTTGTTTTCGCCGGTGCTCTGATTCAATTGCGAAGGAGTGAAGGAATACG GTCGTGCCTCAGAGTGTCAAATTTAGAAGAACATTGCTAGAAGCACTGGT AAGTACATAAGATGTTATGTTGTCAGCTCTCCCTGCAGCTTGTTTTGAAG CCGCGCTGTGCAAGATCTAGCAGGCCGGGGCTTGCGGCTAAAATGAGGCG GCTTGAAATCACCGTTCAGGTCCGTGATCACAGACAATCAAGAGCGCTCA CATGCACAACCGACCTTCAGCCAGCCGCAGCACCTACACACGAACCATGA GGACCATCAGTTTTGCTGCGTGCTTGTGTATTGCGCTGGGGGCCAGTGCT CCGGCTCGTCAAGGTGAGCGAAGGAACAGTCTCGTTGACAAACGTCTTTG TTTTCGCCGGTGCTCCGATTCAATTGCGAAGGAGTGAAGGAATACGGTCG TGCCTCAGAGTGTCAAATTTAGAAGAACATTGCTAGAAGCACTGGCAAGT ACATGAGATGTTATGTCATGTATCATCCTCATGAGGTTGCTGAACACCAG GTTGCGAACAGAAGTCTCCACATTCAATTTATGACACCGGCATCATGCTC ATGCTGTGGGCCAAAGGAGTGTAACAGCTGCGGATCTGCATTATGAAACT TTGCAACAGAGGGGTTACAATGATGTGGCTTCTTTAACTGAGATTGCGGT CAGCGAGCACTTGTTCTGGCTGAAACAGAGATCTGGTCGTTGTTTCAACT GACAGACTGTCAGTGACTGAAGTGACTGGCGTACGTGTACAAGGCTGAGG AGGAGGATAAAATGCAATTAATCAGCATATCAGGCAGCCTGAGGCTGGCT CGAAGCGAGCCTCAGGGCCTGCATGTATCAATAATTACTGCAAGGGCCCG GGGGTCCCTTACTTCAAGTTCTTATTTTAGTAGAAACTGTAACTATTACA GCTGTACTATTAGTCTAGTAGTTGTACGTATGGACTTGTATTTATAAAGG CCCACTAGTAGTTGTACTTATAATTAGTACTAGCTAACCATAAAATTTTC AAACAGTTGATATTCGGGACGTGTTGACGACAGACACAACAGCAACTGCA ACTGATATATTCATCAAAGCTCTAACTCACAGTTGAATTTAGTAAATACT ATACTATTAGTATACAGTGTATAAATTCGGGTACTGGTGGCTTTGAGTCA AGGCTTGCACTACTAGTACATCATGGCATGCGTAGTACTTCTTGAAGTAG TATGTAGGCCACTACTATTAGTATTTACTGGCAGATGAGGGCCTTCTGCT CTGGCAGTTAATCGTTGGACGAAAGTTACACTAAGTGACCGTAAAATAGT GATACCATGTCCGACTCGGACAAGTTCTGATTTACTATGAGTCCCGGATA ATATAATAATATCATAGACTCCTGGAGTACCTGTACTATTTGATGTTATG TTGATGTCGTACATCAATGATTATGTGGTTAGAGTAACTGTTACAGACTT GAGTAACAGAGACAGTTGTTGGCACTTTAATTCTCGTTGGTACTAGTTGT TACTTCTGGTTTAAGATGTCATCATGATCTACGCAATTTAATTTACGTTC AATTTGTCACACGATCAAGCTGACTCAGAGGACCGTCCGACTATTGCAAG TACATGTTGTATCCGATGAGTGAGTAGGGGGCAAAACAATGCGCCAAGCC TAAGGCTTCAAGGTGTGACTACTAGTATGTCACAATCTGCAGCATGTAAG ACTCTCAGACTGCGACAATCAGCCCGCACTGGCAGTCACTGTGTTGCTGC CCCCTTCTATGGCAAGACTTGAAGTGTCAAAAAATTCCATTTCCTCCAAA TGTTTGACCGCATGCATGGCATGATGATCATGCTCTTGCATGCCTCACCT CTGCTCTGCTGTGCGCACTGCAGGCGCACGGGGGCTGCAGCAGGGCCACT GCGACTACACCCCTGCAGGCTACTCCGGAGACGTGGTTGCGGTGTGCATC ACCAAGAAGGCGTGCAGCAAGCAGCCTTGCGGTTCCGGCCTTCCTGCTGT CGCAAAGGATGGATTGTGCAACGACAAGTCGGGCGCCGCCACTGGCAACG GCAACCTCGCAATGACGTGCTGCTCGTGTCTCTCCGCTGCATAAAAGCGA GCCACCAGCCTGAGTGTGTGGCCTCTGAGACTGTCACACGGGTCAAGATG CCGCCACTTCATCTCCAGAGTCAGACGATGGCGGTTGTGCTGCGCTAGCA GCTGCCCAGCACGCCACATGTGCGATGATCGGCCAGCATCATGTAGACTT AGAACTGTCCAGTGACTTCGGAAAATTCTTCACAATAGTTATCCTGGTCA CATGTTGTCTCATGATCAGCGCACCGTGACCGGCTAGGAGTTCGTCCGAT GGAAACACCACCGCGACGGCAAAACAACTGGTAGGGTCATCTACCTGGAT CCCTGCTCTACCTTGCAACATTTCATGAATATACCTGCCCCTTCACAATT TGCTCGGAAGCTTTTGAACTTCTGCCTTTGGTGACTGCGACATACCGATC ACCGTGACAGGGCGTGCGCTGCACATGTGACCAATGGCATGCACACATTT ACTCTAATGATTGAGAAGTAGAAGGCTTCAACCACTGGTAGTCAGTCAGC ACTCACTGACAGGCTGCGTCTTCTGTAGACTATTGACTCAGAATCTACTT GCAGTCAGTAAATGCGTATGCGTTAATGCAACATGCGCAAGCCGGGCTTC GCCAGGCTCTCCATGTGCGACAGCCTGAGCCTGCATGCTCAGCCTCATGT GCAGCCTCAGGCCCAGTCAGTCACTGTGCCACATGCCACACGGTGTGCAT GCGACATCTGCCATGGCAATGCATGCTCCTACTGCAACAATTCGCTCAAG ATATTCAGCCACTGCAAATGTCAGATGATGTACCCCGGCACTTTCCACTG GCACTGGCAGTTTGCTGCAGCAGCCTATTAGTAAGGCCCGGCTTGCGAAT GCCGCAATGACAGTCAGGAGGTACTACTAGTAGTTCAGAGGCTCGTCGAC TTGGACAAACCGGACGCTACTTTAATACATGGTATTACCAAGTACTAGTA GCACTCAGTCTCGTAGCAGTATGCTATAGCCCTGATGGCGACGTCAGCGC CTACCGCCGCATCGCACTGGTGCAGGTGCCGCAGCCCTCGCCGGCCAGCG CCGAACCGCCGCCCCCCCCGTAGATGCAGTTATTGCAAAGCCCGTTTTAT CGACGATTATCCGGTGCACTCACTTTAACAACTTCAACTACTACTTCTAC AAGTTGAAGTATATCACTTGAAGTTTTATTTGTTTTTTGAGTACATGTGC TAGCGGGGAAATGATGCGGCCACCACAGCGGCAGCAAACGCTGCGGGCGG GTATACGTGCAACCACACTGCTATTGCTGATCGGCAGCCGACTGCCAGCC TGCACACGAGCAATAAGCGGAGTGGGAGACTTAGCGTATGCTCCGGATGG TCTTGTGCAGGAGGGCGCCCAGGCGGCACCATGGCTTTCCACTGCGACAG TGAAGCTTGCCTATGTGCAGCATGCTGTGGGGGGGGCAAGTGTCGAGGTG AGGGACGATGGCACCGCTGCCCTAAGGCGGCAACATCGGCTTGAACAGGA TCGGCAGTTAGAGCTTGGCCCTTTGTTTGCTGCCGAGGAGTTTGATCATC CCAAAACACATCCACCGCAGCTTCCTGGTGACCTCACCGACCACCTGCTA GTAATACCGGAGCACAAGCTGCTGTTCTGTTTCATTGCGAAGAACAACTG CTTGTCGTTCAACGATCTGTTCCGATCACTGCGGGAGCGCTACGACCCCA GCCTAGCGGAGGGTCCCAATTTCGGCCGCAACAGCTACACCAACCACAAC ATGACCCTAGAGCAGCTGACAGAGTATGTATACGACCCCGCCTGGCACAA GGCCGTCTTTTACAGGGAGCCGCTTGTCCGGTTTGTCTCGGCGTTTCGGT CCAAGTGCGTGAGGGAACCGCACGCCGGCAATGGAGTGTGCCAGGCGGAG TTCGGCCGCAAGTACCCGCAATTCACGGAAGTCGTGGGGCGCCTGGCCCG GGGACCCCCTGTGAGCAACCCCCACTGGCGCCCGCAGGCCGATTTCTGCG GGGGCCTGAGTGGCATGCTGTCCGAGTTTCAGACGATCGAGCCCCTGGAC GCTCGCACTTCGCGCGAGAAAGTGGCGAAACTGCTCAAGCAGGTAGGTAT CGAGGACCCTGAGAGCATACCCGCATTCAACGAGCGCTTCCCCCCGCCGG ACCCCAAAACGGGGGTTTGGCATCCCGAGGAGTCCCCCTTTCACACCACC AATGCGGATAGCGTGGTGCAGGAGTACTATACGCCCTACCTTGCCTGCAC TGTGTTCCAGTACTATTTAGACGATTACCTGTTGTTTGGCATCCCCGCGC CCGCATGGACGAGGAAGTGGGATTTTCACGCGCAGCAGTGGGCCAGGGTT GATTGCGCCACGCTGAAGGAGGACACCTGAGGTGATGCTGCGGTATGTAG CTTTTTGTGCTTTACGCGCCAAGTCTGTTGTTTCAGTTAAATAAACTGCT GTTCTGCT
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Coding sequence (CDS) from alignment at Contig_28:694776..699483+

>mRNA_9017 ID=mRNA_9017|Name=jgi.p|Trimin1|348627|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1098bp|location=Sequence derived from alignment at Contig_28:694776..699483+ (Tribonema minus UTEX_B_3156 )
ATGAGGACCATCAGTTTTGCTGCGTGCTTGGGTATTGCGCTGGGGGCCAG
TGCTCCGGCTCGTCAAGGCGCACGGGGGCTGCAGCAGGGCCACTGCGACT
ACACCCCTGCAGGCTACTCCGGAGACGTGGTTGCGGTGTGCATCACCAAG
AAGGCGTGCAGCAAGCAGCCTTGCGGTTCCGGCCTTCCTGCTGTCGCAAA
GGATGGATTGTGCAACGACAAGTCGGGCGCCGCCACTGGCAACGGCAACC
TCGCAATGACCGCCTACCGCCGCATCGCACTGGTGCAGCTTCCTGGTGAC
CTCACCGACCACCTGCTAGTAATACCGGAGCACAAGCTGCTGTTCTGTTT
CATTGCGAAGAACAACTGCTTGTCGTTCAACGATCTGTTCCGATCACTGC
GGGAGCGCTACGACCCCAGCCTAGCGGAGGGTCCCAATTTCGGCCGCAAC
AGCTACACCAACCACAACATGACCCTAGAGCAGCTGACAGAGTATGTATA
CGACCCCGCCTGGCACAAGGCCGTCTTTTACAGGGAGCCGCTTGTCCGGT
TTGTCTCGGCGTTTCGGTCCAAGTGCGTGAGGGAACCGCACGCCGGCAAT
GGAGTGTGCCAGGCGGAGTTCGGCCGCAAGTACCCGCAATTCACGGAAGT
CGTGGGGCGCCTGGCCCGGGGACCCCCTGTGAGCAACCCCCACTGGCGCC
CGCAGGCCGATTTCTGCGGGGGCCTGAGTGGCATGCTGTCCGAGTTTCAG
ACGATCGAGCCCCTGGACGCTCGCACTTCGCGCGAGAAAGTGGCGAAACT
GCTCAAGCAGGTAGGTATCGAGGACCCTGAGAGCATACCCGCATTCAACG
AGCGCTTCCCCCCGCCGGACCCCAAAACGGGGGTTTGGCATCCCGAGGAG
TCCCCCTTTCACACCACCAATGCGGATAGCGTGGTGCAGGAGTACTATAC
GCCCTACCTTGCCTGCACTGTGTTCCAGTACTATTTAGACGATTACCTGT
TGTTTGGCATCCCCGCGCCCGCATGGACGAGGAAGTGGGATTTTCACGCG
CAGCAGTGGGCCAGGGTTGATTGCGCCACGCTGAAGGAGGACACCTGA
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