mRNA_9017 (mRNA) Tribonema minus UTEX_B_3156
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Overview
Homology
BLAST of jgi.p|Trimin1|348627 vs. uniprot
Match: A0A835YXU8_9STRA (Sulfotransferase family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXU8_9STRA) HSP 1 Score: 763 bits (1971), Expect = 7.800e-279 Identity = 365/365 (100.00%), Postives = 365/365 (100.00%), Query Frame = 1
Query: 1 MRTISFAACLGIALGASAPARQGARGLQQGHCDYTPAGYSGDVVAVCITKKACSKQPCGSGLPAVAKDGLCNDKSGAATGNGNLAMTAYRRIALVQLPGDLTDHLLVIPEHKLLFCFIAKNNCLSFNDLFRSLRERYDPSLAEGPNFGRNSYTNHNMTLEQLTEYVYDPAWHKAVFYREPLVRFVSAFRSKCVREPHAGNGVCQAEFGRKYPQFTEVVGRLARGPPVSNPHWRPQADFCGGLSGMLSEFQTIEPLDARTSREKVAKLLKQVGIEDPESIPAFNERFPPPDPKTGVWHPEESPFHTTNADSVVQEYYTPYLACTVFQYYLDDYLLFGIPAPAWTRKWDFHAQQWARVDCATLKEDT 1095
MRTISFAACLGIALGASAPARQGARGLQQGHCDYTPAGYSGDVVAVCITKKACSKQPCGSGLPAVAKDGLCNDKSGAATGNGNLAMTAYRRIALVQLPGDLTDHLLVIPEHKLLFCFIAKNNCLSFNDLFRSLRERYDPSLAEGPNFGRNSYTNHNMTLEQLTEYVYDPAWHKAVFYREPLVRFVSAFRSKCVREPHAGNGVCQAEFGRKYPQFTEVVGRLARGPPVSNPHWRPQADFCGGLSGMLSEFQTIEPLDARTSREKVAKLLKQVGIEDPESIPAFNERFPPPDPKTGVWHPEESPFHTTNADSVVQEYYTPYLACTVFQYYLDDYLLFGIPAPAWTRKWDFHAQQWARVDCATLKEDT
Sbjct: 1 MRTISFAACLGIALGASAPARQGARGLQQGHCDYTPAGYSGDVVAVCITKKACSKQPCGSGLPAVAKDGLCNDKSGAATGNGNLAMTAYRRIALVQLPGDLTDHLLVIPEHKLLFCFIAKNNCLSFNDLFRSLRERYDPSLAEGPNFGRNSYTNHNMTLEQLTEYVYDPAWHKAVFYREPLVRFVSAFRSKCVREPHAGNGVCQAEFGRKYPQFTEVVGRLARGPPVSNPHWRPQADFCGGLSGMLSEFQTIEPLDARTSREKVAKLLKQVGIEDPESIPAFNERFPPPDPKTGVWHPEESPFHTTNADSVVQEYYTPYLACTVFQYYLDDYLLFGIPAPAWTRKWDFHAQQWARVDCATLKEDT 365
BLAST of jgi.p|Trimin1|348627 vs. uniprot
Match: A0A835Z0T9_9STRA (Sulfotransferase family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0T9_9STRA) HSP 1 Score: 503 bits (1294), Expect = 1.330e-176 Identity = 231/268 (86.19%), Postives = 246/268 (91.79%), Query Frame = 1
Query: 283 VQLPGDLTDHLLVIPEHKLLFCFIAKNNCLSFNDLFRSLRERYDPSLAEGPNFGRNSYTNHNMTLEQLTEYVYDPAWHKAVFYREPLVRFVSAFRSKCVREPHAGNGVCQAEFGRKYPQFTEVVGRLARGPPVSNPHWRPQADFCGGLSGMLSEFQTIEPLDARTSREKVAKLLKQVGIEDPESIPAFNERFPPPDPKTGVWHPEESPFHTTNADSVVQEYYTPYLACTVFQYYLDDYLLFGIPAPAWTRKWDFHAQQWARVDCATLK 1086
VQLPGDL DHLLVIPEHKLLFC+IAKNNCLSFNDLFRSLRERYDPSLAEGP+FGRNSYTNHNMTLEQLTEY+YDP WHKAVFYREPLVRFVSA+RSKCVRE HAGN VCQ++FG K+P F VV RL R PP+ NPHWRPQADFCGGLSG+LSEFQTIEPLDARTSREKVAKLLKQVGIEDPESIPAFNERFPPPDP+TGVW PE+SPFHTTNADSVV EYYTP+ ACTVFQYYLDD+LLFGIPAP WTR+WDFHAQ W DC L+
Sbjct: 41 VQLPGDLADHLLVIPEHKLLFCYIAKNNCLSFNDLFRSLRERYDPSLAEGPSFGRNSYTNHNMTLEQLTEYIYDPTWHKAVFYREPLVRFVSAYRSKCVREKHAGNEVCQSQFGIKHPLFKSVVKRLTREPPIENPHWRPQADFCGGLSGILSEFQTIEPLDARTSREKVAKLLKQVGIEDPESIPAFNERFPPPDPETGVWRPEQSPFHTTNADSVVAEYYTPFTACTVFQYYLDDFLLFGIPAPEWTRQWDFHAQHWTTGDCKPLQ 308
BLAST of jgi.p|Trimin1|348627 vs. uniprot
Match: A0A835Z7D4_9STRA (Sulfotransferase family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7D4_9STRA) HSP 1 Score: 303 bits (776), Expect = 6.390e-97 Identity = 146/270 (54.07%), Postives = 191/270 (70.74%), Query Frame = 1
Query: 289 LPGDLTDHLLVIPEHKLLFCFIAKNNCLSFNDLFRSLRERYDPSLAEGP-NFGRNSYTNHNMTLEQLTEYVYDPAWHKAVFYREPLVRFVSAFRSKCVREPHAGNGVCQAEFGRKY-PQFTEVVGRLARGPPVSNPHWRPQADFCGGLSGMLSEFQTIEPLDARTSREKVAKLLKQVGIEDPESIPAFNERFPPPDPKTGVWHPEESPFHTTNADSVVQEYYTPYLACTVFQYYLDDYLLFGIPAPAWTR--KWDFHAQQWARVDCATLK 1086
+PGDL DH +++PEHKL+FCFIAK N +FN LFRSLR RYDP +AEG FG N+Y HNMT+ Q+ E V++P+WHKAVFYREPLVRF+SA++SKC + +C P F ++V RL + P + NPHWRPQ DFCGGL+G++ + QT++ LD TSR +V++LL+QVG+ DP +P F RFPP + G H+ +AD+ VQ+ Y+PYLAC VFQY++DDYLLFGIP PAWTR KWDFH Q W+ DC +L+
Sbjct: 118 IPGDLMDHWIIVPEHKLMFCFIAKVNSAAFNQLFRSLRSRYDPQMAEGKVAFGLNNYLYHNMTVSQVAELVHNPSWHKAVFYREPLVRFLSAWKSKCEKGVIRDLSMCADVLHMSVAPDFPQIVERLWQSPRIVNPHWRPQVDFCGGLTGIIDQIQTVKRLDLTTSRAEVSELLQQVGV-DPADVPMFETRFPPLMQEEGSDGAGLHWDHSFHADASVQQAYSPYLACRVFQYFIDDYLLFGIPVPAWTRQHKWDFHRQNWSSGDCESLR 386
BLAST of jgi.p|Trimin1|348627 vs. uniprot
Match: A0A835Z974_9STRA (Sulfotransferase family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z974_9STRA) HSP 1 Score: 307 bits (787), Expect = 1.110e-95 Identity = 167/329 (50.76%), Postives = 199/329 (60.49%), Query Frame = 1
Query: 286 QLPGDLTDHLLVIPEHKLLFCFIAKNNCLSFNDLFRSLRERYDPSLA---------------EGPNFGRNSYTNHNMTLEQLTEYVYDPAWHKAVFYREPLVRFVSAFRSKCVREPHAGNGVCQAEFGR-KYPQFTEVVGRL---ARGPPVSNPHWRPQADFCGGLSGMLSEFQTIEPLDARTSREKVAKLLKQVGIEDP-------------------ESIPAFNERFPPPDPKTGVWHPEESPF--HTTNADSVVQEYYTPYLACTVFQYYLDDYLLFGIPAPA-----------------------------WTRKWDFHAQQWAR 1065
+L GDL DHL+V+PEHKLLFCFIAK N L+FNDLFRSLRER+DPS+ + FGRN+Y HN++LE+LT+ VYDP+WHKAVFYREPLVRFVSA+RSKC R+ +C+ FG K+P+F+ V RL A P +NPHWRPQ +FCGGL+ L+E+QT+E LDAR SRE VAKLL +G+ DP ESIP FN FPPPD P+ P H T+AD VQ YYTP ACTV +YYLDDYLLFG+P PA WTR W FHAQ WAR
Sbjct: 219 RLSGDLVDHLIVVPEHKLLFCFIAKCNSLAFNDLFRSLRERHDPSMNTPESXXXXXXXXMADDSVKFGRNTYAYHNLSLEELTDRVYDPSWHKAVFYREPLVRFVSAYRSKCDRDSQEDGVLCKRVFGLGKHPRFSAVTQRLSDAAAHPIDANPHWRPQTEFCGGLAETLAEYQTVEALDARDSRENVAKLLSDIGVADPPNFNKXXXXXXXXXXXXXXESIPVFNLHFPPPDAG-----PDAGPHNHHATHADDKVQRYYTPRRACTVVRYYLDDYLLFGVPVPALRRAAGRAIAXXXXXXXXXXXXXXXXXXXWTRSWKFHAQHWAR 542
BLAST of jgi.p|Trimin1|348627 vs. uniprot
Match: A0A835Z3G3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3G3_9STRA) HSP 1 Score: 295 bits (755), Expect = 5.800e-94 Identity = 153/328 (46.65%), Postives = 179/328 (54.57%), Query Frame = 1
Query: 364 NCLSFNDLFRSLRERYDPSLAEGPNFGRNSYTNHNMTLEQLTEYVYDPAWHKAVFYREPLVRFVSAFRSKCVREPHAGNGVCQAEFGRKYPQFTEVVGRLARGPPVSNPHWRPQADFCGGLSGMLSEFQTIEP--------------------------------------------------------------------------------------LDARTSREKVAKLLKQVGIEDPESIPAFNERFPPPDPKTGVWHPEE-SPFHTTNADSVVQEYYTPYLACTVFQYYLDDYLLFGIPAPAWTRKWDFHAQQWARVDCATLK 1086
NCL+FN LF SLR RYDPSL EGP + R S+ H + L+ LT +YDP WHKAVFYREPL RF+SA+RSKC G +C+ EFG+ P F E V RL P + NPHWRPQ DFC GLS + S+F + LDARTSR+KV +LL +VGIED E+IPAFNERFPP DP+TG W P HTTNA+S V+ YYTPYLAC VFQY++DDY+LFGIP PAWTRKWDFHAQ WA DCATL+
Sbjct: 42 NCLAFNKLFNSLRSRYDPSLLEGPAWNRTSHVQHRIKLKTLTRMIYDPTWHKAVFYREPLARFLSAYRSKCESGHDDGAELCEQEFGKPNPTFEEAVERLVTQPYIWNPHWRPQVDFCSGLSAITSQFLALNAITDAQSSNCAHYRERSRMPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMPPHPHCHTAVNAHAXXXXXXXXXXXXXXXXXXXXXXLDARTSRDKVTQLLHRVGIEDAETIPAFNERFPPLDPETGEWRPHALHSNHTTNAESAVEAYYTPYLACRVFQYFIDDYILFGIPVPAWTRKWDFHAQHWATADCATLR 369
BLAST of jgi.p|Trimin1|348627 vs. uniprot
Match: A0A835YPV5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPV5_9STRA) HSP 1 Score: 281 bits (719), Expect = 2.340e-90 Identity = 138/246 (56.10%), Postives = 167/246 (67.89%), Query Frame = 1
Query: 352 IAKNNCLSFNDLFRSLRERYDPSLAEGPNFGRNSYTNHNMTLEQLTEYVYDPAWHKAVFYREPLVRFVSAFRSKCVREPHAGNGVCQAEFGRKYPQFTEVVGRLARGPPVSNPHWRPQADFCGGLSGMLSEFQTIEPLDARTSREKVAKLLKQVGIEDPESIPAFNERFPPPDPKTGVWHPEES-PFHTTNADSVVQEYYTPYLACTVFQYYLDDYLLFGIPAPAWTRKWDFHAQQWARVDCATLK 1086
+ +NNC SFN LF SLR RYD SL EG +GRN +HNMTL QL + VYD WHKAVFYREPLVR++SA+RSKC G +C A FG+ P F E V RL + PPV NPH+RPQ DFCGGL +L +FQT+E LD RTSR+ VA LL++VG+ DPE +PAFNERFPP D G W P +S HTT+A + V+ YYTPYLAC V ++LDDYL FG+ P W W + DCA L+
Sbjct: 2 LFQNNCQSFNHLFTSLRSRYDESLLEGDIWGRNDMHSHNMTLPQLADLVYDDTWHKAVFYREPLVRYLSAYRSKCEVGHDDGFELCTALFGKPNPTFAEAVERLTQDPPVDNPHFRPQVDFCGGLGAILPQFQTVEALDPRTSRDAVAALLRRVGVADPEGVPAFNERFPPFDAAAGAWRPNDSYARHTTDAAAAVEAYYTPYLACVVVTHFLDDYLTFGVAVPEWA--WRLGLRD-VGGDCAALR 244
BLAST of jgi.p|Trimin1|348627 vs. uniprot
Match: A0A836CJ81_9STRA (Sulfotransferase family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ81_9STRA) HSP 1 Score: 270 bits (690), Expect = 7.550e-85 Identity = 140/292 (47.95%), Postives = 179/292 (61.30%), Query Frame = 1
Query: 298 DLTDHLLVIPEHKLLFCFIAKNNCLSFNDLFRSLRERYDPSLAEGPNFGR------NSYTNHNMTLEQLTEYVYDPAWHKAVFYREPLVRFVSAFRSKCVREPHA-----------------GNGVCQAEFGRKYPQFTEVVGRLARGPPVSNPHWRPQADFCGGLSGMLSEFQTIEPLDARTSREKVAKLLKQVGIEDPESI--PAFNERFPPP---DPKTGVWHPEESPFHTTNADSVVQEYYTPYLACTVFQYYLDDYLLFGIPAPAWTRKWDFHAQQWARVDCATLKE 1089
DL DHL+V+PE+K++FC IAK + ++FNDLFRSLR +DPS+ EG FGR NSY +HN +L+ LT+ V D W KAVFYREPL RFVSA++ KC R P G+ C FG+++P FTEVV RL + P + N HWRPQ +FCG L ++ EF +E LD RTSREKV +LL + D + + AFN FP DP E +HTTNAD+ V YYT YLAC VFQYY DDY+LF + P W R+W F+ W DC+TL++
Sbjct: 33 DLADHLIVVPEYKIIFCSIAKVSSVAFNDLFRSLRAPFDPSMLEGTRFGRIIPFGRNSYASHNWSLQNLTQAVNDRDWVKAVFYREPLTRFVSAYKEKCERRPPGNRQLLGWSPLALPPRPPGSSFCSRIFGQRHPTFTEVVERLQQQPRIENAHWRPQHEFCG-LRNIIQEFNFVELLDRRTSREKVVELLSAARVPDLKFMNDTAFNAHFPAAAAGDPSVAA----EPKWHTTNADATVDSYYTRYLACIVFQYYYDDYVLFEMDVPVWARQWGFYVDGWEMKDCSTLRD 319
BLAST of jgi.p|Trimin1|348627 vs. uniprot
Match: A0A836CJZ7_9STRA (Sulfotransferase family-domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJZ7_9STRA) HSP 1 Score: 264 bits (675), Expect = 3.450e-82 Identity = 137/280 (48.93%), Postives = 167/280 (59.64%), Query Frame = 1
Query: 295 GDLT-DHLLVIPEHKLLFCFIAKNNCLSFNDLFRSLRERYDPSLAEGPN------FGRNSYTNHNMTLEQLTEYVYDPAWHKAVFYREPLVRFVSAFRSKCVREPHAGNG-------------------------VCQAEFGRKYPQFTEVVGRLARGPPVSNPHWRPQADFCGGLSGMLSEFQTIEPLDARTSREKVAKLLKQVGIEDPESIPAFNERFPPPDPKTGVWHPEESPFHTTNADSVVQEYYTPYLACTVFQYYLDDYLLFGIPAPAWTRKW 1038
GD DHLL++PE+KL+FCFIAK + LSFNDL RSLR +DP + EG FGRNSY +HN +L+ LT+ ++DPAW KAVFYREPL RFVSA+R KC + H G +C FG +P F VV RL R P V++PHWR Q +FCGGL + EFQ +E L+ TSREKV +LL + + + S AFN RFPP P P H TNAD+ + YYTPYLAC VFQYY DDY LFG+ P W R W
Sbjct: 79 GDFALDHLLIVPEYKLIFCFIAKVSSLSFNDLLRSLRAPFDPGMLEGEAYGRIIPFGRNSYRSHNWSLQDLTDALHDPAWLKAVFYREPLTRFVSAYRDKCGKRTHGARGLPPRNRRRRAWSPLHERKANHKHDKICLRSFGEDWPSFETVVDRLLREPRVTDPHWRRQHEFCGGLDRFIGEFQFVEVLERATSREKVGELLARAHVPNFNSDAAFNLRFPPTAPGDASRDP-----HATNADAAARSYYTPYLACVVFQYYYDDYALFGMQLPEWARAW 353
BLAST of jgi.p|Trimin1|348627 vs. uniprot
Match: A0A835Z948_9STRA (Sulfotransferase family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z948_9STRA) HSP 1 Score: 231 bits (590), Expect = 1.900e-68 Identity = 132/286 (46.15%), Postives = 165/286 (57.69%), Query Frame = 1
Query: 235 TGNGNLAMTAYRRIALVQLPGDLTDHLLVIPEHKLLFCFIAKNNCLSFNDLFRSLRERYDPSLAEGPNFGR-NSYTNHNMTLEQLTEYVYDPAWHKAVFYREPLVRFVSAFRSKCVREPHAGNGVCQAEFGRKYPQFTEVVGRLARGPPVSNPHWRPQADFCGGLSGMLSEFQTIEPLDARTSREKVAKLLKQVGIEDPESIPAFNERFPPP--------------------DPKTGVWHPEESPFHTTNADSVVQEYY-TPYLACTVFQYYLDDYLLFGIPAPAW 1026
TG+G TA A + +L H +++PE KLLFCFI K C SFNDLFRS R R+DP A+G R N+ HNM+ + V D WHKAVF+REPL RF+SAFRSKC C FG K P F + RL + PP+++ HWRPQ+DFCGGL LS FQT+E LD TS EKV+ LL +G++ PESIPAF+ FP P K G P E+ H T+A +++YY +P +AC V QYY+DDYLLFGI P W
Sbjct: 29 TGDG--VTTAAHVTAPAPVMDNLYQHWIIVPEIKLLFCFIEKVGCESFNDLFRSYRSRWDPRQAKGRKPWRLNNMKAHNMSEADVDRLVLDETWHKAVFFREPLERFLSAFRSKCEPGHDTDREHCTDTFGSKDPPFAVAIDRLRQAPPITDAHWRPQSDFCGGLPSKLSHFQTVEQLDPATSHEKVSALLHTLGVQ-PESIPAFHRHFPRPASSVADSSGTXXXXXXXXGAKQKAGAV-PNET--HLTHAADALRKYYLSPAMACAVVQYYIDDYLLFGIALPQW 308
BLAST of jgi.p|Trimin1|348627 vs. uniprot
Match: A0A835YYQ7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYQ7_9STRA) HSP 1 Score: 187 bits (476), Expect = 3.200e-54 Identity = 93/178 (52.25%), Postives = 116/178 (65.17%), Query Frame = 1
Query: 277 ALVQLPGDLTDHLLVIPEHKLLFCFIAKNNCLSFNDLFRSLRERYDPSLAEGPNFGRNSYTNHNMTLEQLTEYVYDPAWHKAVFYREPLVRFVSAFRSKCVREPH--AGNGVCQAEFGRKYPQFTEVVGRLARGPPVSNPHWRPQADFCGGLSGMLSEFQTIEPLDARTSREKVAKLL 804
+L+ +L + +++PEHKLLFCFI K C SFN LF+SLR RYDP+ A +G N+ T HN+T + YV DP WHKAVFYREPLVRF+SAFRSKC EPH C A FG + P F V RL++ P+++ HWR Q FCGGL L FQT+E LDA TSR+K + L
Sbjct: 41 SLLDGKSNLYNKWIIVPEHKLLFCFIEKVGCKSFNQLFKSLRARYDPTQAAAGVWGSNNMTAHNLTEADIDAYVEDPLWHKAVFYREPLVRFLSAFRSKC--EPHHDGDRQHCTATFGSEQPPFAAAVDRLSQQQPITDAHWRRQIHFCGGLQSKLVHFQTVEQLDAITSRQKCTRCL 216 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|348627 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_9017 ID=mRNA_9017|Name=jgi.p|Trimin1|348627|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1176bp|location=Sequence derived from alignment at Contig_28:694776..699483+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGAGGACCATCAGTTTTGCTGCGTGCTTGGGTATTGCGCTGGGGGCCAGback to top protein sequence of jgi.p|Trimin1|348627 >Trimin1|348627|estExt_Genemark1.C_Ctg_280068 ID=Trimin1|348627|estExt_Genemark1.C_Ctg_280068|Name=jgi.p|Trimin1|348627|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=366bp MRTISFAACLGIALGASAPARQGARGLQQGHCDYTPAGYSGDVVAVCITKback to top mRNA from alignment at Contig_28:694776..699483+ Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_9017 ID=mRNA_9017|Name=jgi.p|Trimin1|348627|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=4708bp|location=Sequence derived from alignment at Contig_28:694776..699483+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_28:694776..699483+ >mRNA_9017 ID=mRNA_9017|Name=jgi.p|Trimin1|348627|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1098bp|location=Sequence derived from alignment at Contig_28:694776..699483+ (Tribonema minus UTEX_B_3156 )back to top |