mRNA_8977 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|163956
Unique NamemRNA_8977
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
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BLAST of jgi.p|Trimin1|163956 vs. uniprot
Match: A0A836CF46_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CF46_9STRA)

HSP 1 Score: 396 bits (1017), Expect = 4.920e-140
Identity = 181/181 (100.00%), Postives = 181/181 (100.00%), Query Frame = 1 
Query:    1 MDRAAAGGRIEVMQWLRHEQSLPFTPHTMTIAATFGHLTTLQWLHQVGCPHDIACICELSFQEGVARATPSQMEWLRSVGGSWSCEMVTHALFGLFGHDTPTFNLKQMISWLRSEGATWPQLSEVADAVGADELDAAAVLWAAQQGCPWGDWTPDYCDDVSLGRYSIKKALHDAGCPCQCE 543
            MDRAAAGGRIEVMQWLRHEQSLPFTPHTMTIAATFGHLTTLQWLHQVGCPHDIACICELSFQEGVARATPSQMEWLRSVGGSWSCEMVTHALFGLFGHDTPTFNLKQMISWLRSEGATWPQLSEVADAVGADELDAAAVLWAAQQGCPWGDWTPDYCDDVSLGRYSIKKALHDAGCPCQCE
Sbjct:    1 MDRAAAGGRIEVMQWLRHEQSLPFTPHTMTIAATFGHLTTLQWLHQVGCPHDIACICELSFQEGVARATPSQMEWLRSVGGSWSCEMVTHALFGLFGHDTPTFNLKQMISWLRSEGATWPQLSEVADAVGADELDAAAVLWAAQQGCPWGDWTPDYCDDVSLGRYSIKKALHDAGCPCQCE 181
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BLAST of jgi.p|Trimin1|163956 vs. uniprot
Match: A0A835YZ94_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZ94_9STRA)

HSP 1 Score: 264 bits (675), Expect = 1.060e-83
Identity = 127/181 (70.17%), Postives = 143/181 (79.01%), Query Frame = 1 
Query:    1 MDRAAAGGRIEVMQWLRHEQSLPFTPHTMTIAATFGHLTTLQWLHQVGCPHDIACICELSFQEGVARATPSQMEWLRSVGGSWSCEMVTHALFGLFGHDTPTFNLKQMISWLRSEGATWPQLSEVADAVGADELDAAAVLWAAQQGCPWGDWTPDYCDDVSLGRYSIKKALHDAGCPCQCE 543
            M+RAAAGG I+VMQWL HEQ LP TP TM++              QVGCP+DIA IC+LSFQEGVARATPSQMEWLRSVGGSWS EMVT AL+ L G+ T T   K+MI WLRSEGA WPQLSE+A AVGA++L+AAAVLWAAQQGCPWGDWT + CD +S GRYSIK A+HDA CPCQCE
Sbjct:  317 MNRAAAGGHIKVMQWLHHEQPLPVTPQTMSVXXXXXXXXXXXXXXQVGCPYDIAYICKLSFQEGVARATPSQMEWLRSVGGSWSYEMVTAALYDLVGYCTSTS--KEMIGWLRSEGAPWPQLSELAVAVGAEDLNAAAVLWAAQQGCPWGDWTSECCDAMSHGRYSIKTAIHDARCPCQCE 495
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BLAST of jgi.p|Trimin1|163956 vs. uniprot
Match: A0A835ZHQ4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHQ4_9STRA)

HSP 1 Score: 234 bits (598), Expect = 8.360e-77
Identity = 118/181 (65.19%), Postives = 123/181 (67.96%), Query Frame = 1 
Query:    1 MDRAAAGGRIEVMQWLRHEQSLPFTPHTMTIAATFGHLTTLQWLHQVGCPHDIACICELSFQEGVARATPSQMEWLRSVGGSWSCEMVTHALFGLFGHDTPTFNLKQMISWLRSEGATWPQLSEVADAVGADELDAAAVLWAAQQGCPWGDWTPDYCDDVSLGRYSIKKALHDAGCPCQCE 543
            MDRA+AGG IEVMQWL HEQSLPFTP TM  AA FG L  LQWLHQVGCP+DIA ICE S +EG                                           MISWLR EGATWPQLS+VADAVGAD LDAAAVLWAAQQGCPWGDWT DYC+DVSLGRYSIKKALHDAGCPCQCE
Sbjct:    1 MDRASAGGHIEVMQWLHHEQSLPFTPPTMPTAAIFGRLAALQWLHQVGCPYDIAYICERSLKEG------------------------------------------DMISWLRREGATWPQLSDVADAVGAD-LDAAAVLWAAQQGCPWGDWTLDYCEDVSLGRYSIKKALHDAGCPCQCE 138
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BLAST of jgi.p|Trimin1|163956 vs. uniprot
Match: A0A835Z4J9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4J9_9STRA)

HSP 1 Score: 202 bits (513), Expect = 2.940e-63
Identity = 101/189 (53.44%), Postives = 123/189 (65.08%), Query Frame = 1 
Query:    1 MDRAAAGGRIEVMQWLRHEQSLPFTPHTMTIAATFGHLTTLQWLHQVGCPHDIACICELSFQEGVARATP----SQMEWLRSVGGSWSCEMVTHAL---FGLFGHDTPTFNLKQMISWLRSEGATWPQLSEVA-DAVGADELDAAAVLWAAQQGCPWGDWTPDYCDDVSLGRYSIKKALHDAGCPCQCE 543
            MD+AA  GR+E++QWLR EQ LPFT  TM  AA  G    +QWLH+ GCPHD+  ICE+S +      TP     QMEWLR +GGSWS +MVT AL    GL G +T       +I WLR EGA WP L +V    +  ++ D  A++WAAQQGCPWG+WTP  CD VS  RY+I KA+H AGCPCQCE
Sbjct:    1 MDQAALAGRVEILQWLRQEQGLPFTHLTMPCAAARGRCAAVQWLHRAGCPHDVNDICEISLKYSYCM-TPLLNLQQMEWLRGMGGSWSRDMVTAALAEMVGLQGAET-------IICWLRCEGAEWPTLGDVLLSPLEHEDFDVKALVWAAQQGCPWGEWTPTDCDGVSRRRYTIIKAIHAAGCPCQCE 181
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BLAST of jgi.p|Trimin1|163956 vs. uniprot
Match: A0A835YNS1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNS1_9STRA)

HSP 1 Score: 205 bits (522), Expect = 2.090e-61
Identity = 98/184 (53.26%), Postives = 120/184 (65.22%), Query Frame = 1 
Query:    1 MDRAAAGGRIEVMQWLRHEQSLPFTPHTMTIAATFGHLTTLQWLHQVGCPHDIACICELSFQE--GVARATPSQMEWLRSVGGSWSCEMVTHALFGLFGHDTPTFNLKQMISWLRSEGATWPQLSEVADAVG-ADELDAAAVLWAAQQGCPWGDWTPDYCDDVSLGRYSIKKALHDAGCPCQCE 543
            MD+AA GG +EV++WLR E +LPFTP TM  AA  GHL  L+WLH  GCPHD+  +C  SF+        TPSQMEWLRS+GGSWS +  THAL     H    F     + WLR EGA WP+L+ V +     D+  A A++ AA+QGCPWG WTP +C  VS GRYSI K LH AGCPC+C+
Sbjct:  260 MDKAAVGGNVEVLRWLRQEHALPFTPFTMRFAAEKGHLAALKWLHAAGCPHDVEDLCARSFRALADTPGVTPSQMEWLRSLGGSWSRQTATHALL----HLLRDFRNTAAVQWLRREGAEWPELNTVVNQFDHCDDFVAEALVDAARQGCPWGRWTPTHCRIVSRGRYSIIKPLHAAGCPCECD 439
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BLAST of jgi.p|Trimin1|163956 vs. uniprot
Match: A0A835YWG6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWG6_9STRA)

HSP 1 Score: 196 bits (498), Expect = 5.310e-58
Identity = 99/187 (52.94%), Postives = 114/187 (60.96%), Query Frame = 1 
Query:    1 MDRAAAGGRIEVMQWLRHEQSLPFTPHTMTIAATFGHLTTLQWLHQVGCPHDIACICELSFQEGVARATPSQMEWLRSVGGSWSCEMVTHALFGLFGHDTPTFNLKQMISWLRSEGATWPQLSEVA------DAVGADELDAAAVLWAAQQGCPWGDWTPDYCDDVSLGRYSIKKALHDAGCPCQCE 543
            MD+AAAGG IEV+QWL  E +LPF                       GCPHDI  +C LS  + +   TP QMEWLR +GGSWS E VT AL  L G+       ++ ISWLRSEGA W  L+  A      D V + EL   AVLWAAQQGCPWGDWTP+ C  VS GRYSIKKALH+AGCPCQC+
Sbjct:  235 MDKAAAGGHIEVLQWLHQEHALPFRSXXXXXXXXXXXXXXXXXXXXAGCPHDINELCRLSLDDPMMNVTPPQMEWLRGIGGSWSREQVTEALSSLVGY----CGTEKRISWLRSEGAEWLPLAHTARRYSDLDCVDS-ELQVGAVLWAAQQGCPWGDWTPNCCAKVSRGRYSIKKALHNAGCPCQCD 416
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BLAST of jgi.p|Trimin1|163956 vs. uniprot
Match: A0A836CDJ7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDJ7_9STRA)

HSP 1 Score: 192 bits (489), Expect = 5.370e-57
Identity = 92/185 (49.73%), Postives = 114/185 (61.62%), Query Frame = 1 
Query:    1 MDRAAAGGRIEVMQWLRHEQSLPFTPHTMTIAATFGHLTTLQWLHQVGCPHDIACICELSFQEGVARATPSQMEWLRSVGGSWSCEMVTHALFGLFGHDTPTFNLKQMISWLRSEGATWPQLSEVAD----AVGADELDAAAVLWAAQQGCPWGDWTPDYCDDVSLGRYSIKKALHDAGCPCQCE 543
            M++AAA G +EV+QWL  E +LPF   T                ++ GCPHDI  +C++S    + +  P QMEWLR +GGSWS E VT AL  L G+       +++ISWLRSEGA WP L++       A   DE +  AVLWAAQQGCPWGDWTP  C  VS GRYSIK+A H AGCPCQC+
Sbjct:  210 MEKAAASGHVEVLQWLHQEHALPFRSVTXXXXXXXXXXXXXXXXYEAGCPHDINELCDVSLDNPMMKRAPPQMEWLRGIGGSWSREQVTEALSSLVGYR----GAEKLISWLRSEGAEWPSLAQTLQGGYAADDCDEGEVGAVLWAAQQGCPWGDWTPRCCAQVSRGRYSIKEAPHAAGCPCQCD 390
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BLAST of jgi.p|Trimin1|163956 vs. uniprot
Match: A0A835ZI44_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZI44_9STRA)

HSP 1 Score: 188 bits (478), Expect = 2.330e-54
Identity = 95/182 (52.20%), Postives = 113/182 (62.09%), Query Frame = 1 
Query:    1 MDRAAAGGRIEVMQWLRHEQSLPFTPHTMTIAATFGHLTTLQWLHQVGCPHDIACICELSFQEGVARATPSQMEWLRSVGGSWSCEMVTHALFGLFGHD-TPTFNLKQMISWLRSEGATWPQLSEVADAVGADELDAAAVLWAAQQGCPWGDWTPDYCDDVSLGRYSIKKALHDAGCPCQCE 543
            MD+AAAGG +E +QWLR E +LPFTP                  +Q GC  D+  +C+ S +     ATP QMEWLRS+GGSW  E  T  L  L G   T   ++K MI+WLRSE A WPQLSE  D     +  A  V+WA QQGCPWGDWTP+ C  VS GRYSIKKALHDAGCPC+C+
Sbjct:  313 MDKAAAGGCVEALQWLRQEHALPFTPVXXXXXXXXXXXXXXXXXYQAGCQCDVDRVCQWSLRAISPSATPLQMEWLRSLGGSWRREDGTTMLRRLMGSGGTELSSIKDMIAWLRSEDAEWPQLSE--DIECHSDSSAELVVWATQQGCPWGDWTPECCALVSRGRYSIKKALHDAGCPCRCD 492
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BLAST of jgi.p|Trimin1|163956 vs. uniprot
Match: A0A836C9U7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9U7_9STRA)

HSP 1 Score: 172 bits (435), Expect = 7.010e-47
Identity = 85/182 (46.70%), Postives = 107/182 (58.79%), Query Frame = 1 
Query:    4 DRAAAGGRIEVMQWLRHEQSLPFTPHTMTIAATFGH--LTTLQWLHQVGCPHDIACICELSFQEGVARA--TPSQMEWLRSVGGSWSCEMVTHALFGLFGHDTPTFNLKQMISWLRSEGATWPQLSEVADAVGADELDAAAVLWAAQQGCPWGDWTPDYCDDVSLGRYSIKKALHDAGCPCQ 537
            D+AA GG +EV+QWL  E+               GH     L+WLH+ GCPHD+  +CELS +         P  MEWLR +GGSW  EMV+ AL G  G        + MI WLR EGA W  L  +A++   D +D  A+LWAA QGCPWG W P +C ++S GRY IKKA+H+AGCPCQ
Sbjct:  408 DKAAFGGHVEVLQWLHQER---------------GHKRFAALRWLHRAGCPHDVDVLCELSLRNTPEHRCLNPQLMEWLRGIGGSWIREMVSDALIGSLG----VRGSEDMIRWLRREGAQWLDLCYIANS---DTVDIGALLWAAGQGCPWGGWAPKFCVELSHGRYGIKKAVHEAGCPCQ 567
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BLAST of jgi.p|Trimin1|163956 vs. uniprot
Match: A0A835YSQ3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSQ3_9STRA)

HSP 1 Score: 134 bits (336), Expect = 1.290e-34
Identity = 70/184 (38.04%), Postives = 102/184 (55.43%), Query Frame = 1 
Query:    4 DRAAAGGRIEVMQWLRHEQSLPFTPHTMTIAATFGHLTTLQWLHQVGCPHDIACICELSFQEGVARATPSQMEWLRSVGGS-WSCEMVTHALFGLFGHDTPTFNLKQMISWLRSEGATWPQ-LSEVADAVGADELDAAAVLWAAQQGCPWGDWTPDYCDDVSLGR---YSIKKALHDAGCPCQC 540
            D AA    + V+QWL+   +L FT  TM +AA+   L  ++WL   GCPHDI  +C +  + G    T   ++W++S GG  WS + +   L     +DTP      +  WLR+EGA WP+ L+EV      +E+  + +LWA QQGCP+G WT + CD +        ++K+ LHD GCPC C
Sbjct:  174 DAAATAYSVAVLQWLQSRHALEFTGMTMLMAASNAALPNMKWLQAQGCPHDINEVCIMLMRVG---GTEPLLDWVQSCGGGDWSPQGMARLLRSALSNDTPG-----LPRWLRAEGARWPEDLAEVVTTE-IEEVKPSMILWAVQQGCPFGRWTTEVCDSLVRSHPDGAAVKRTLHDLGCPCAC 348
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BLAST of jgi.p|Trimin1|163956 vs. uniprot
Match: A0A835YZA1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZA1_9STRA)

HSP 1 Score: 428 bits (1101), Expect = 5.190e-152
Identity = 206/206 (100.00%), Postives = 206/206 (100.00%), Query Frame = 1 
Query:    1 MLAVWQLAAAEGDVVGKTQITVEGEECNIGIWQQNQRAYWRDGTLSADRVAKLEKAGMLKSVQPKQPWDVNYEAWRLASAEGPIAQASTYTMGGETFKVGFWIKKQRAYHAAGTLSAERITKLAAIKHIGNKRDETWSATFNAWRTAHAQGKVTARTSVIIDGEKYNVGNWQNQQRAKRANLSTERINALNAALFSWEGKYGMRDE 618
            MLAVWQLAAAEGDVVGKTQITVEGEECNIGIWQQNQRAYWRDGTLSADRVAKLEKAGMLKSVQPKQPWDVNYEAWRLASAEGPIAQASTYTMGGETFKVGFWIKKQRAYHAAGTLSAERITKLAAIKHIGNKRDETWSATFNAWRTAHAQGKVTARTSVIIDGEKYNVGNWQNQQRAKRANLSTERINALNAALFSWEGKYGMRDE
Sbjct:    1 MLAVWQLAAAEGDVVGKTQITVEGEECNIGIWQQNQRAYWRDGTLSADRVAKLEKAGMLKSVQPKQPWDVNYEAWRLASAEGPIAQASTYTMGGETFKVGFWIKKQRAYHAAGTLSAERITKLAAIKHIGNKRDETWSATFNAWRTAHAQGKVTARTSVIIDGEKYNVGNWQNQQRAKRANLSTERINALNAALFSWEGKYGMRDE 206
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BLAST of jgi.p|Trimin1|163956 vs. uniprot
Match: A0A835YMR6_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMR6_9STRA)

HSP 1 Score: 208 bits (530), Expect = 9.570e-61
Identity = 100/202 (49.50%), Postives = 133/202 (65.84%), Query Frame = 1 
Query:    1 MLAVWQLAAAEGDVVGKTQITVEGEECNIGIWQQNQRAYWRDGTLSADRVAKLEKAGMLKSVQPKQPWDVNYEAWRLASAEGPIAQASTYTMGGETFKVGFWIKKQRAYHAAGTLSAERITKLAAIKHIGNKRDETWSATFNAWRTAHAQGKVTARTSVIIDGEKYNVGNWQNQQRAKRANLSTERINALNAALFSWEGKYG 606
            M A+W+LA  +GD++  T+ITV+GEE  +GIWQ NQR   ++  LS +RVA L++AG     +P+QPWDVN+ AWRLA  EG + Q +TYTMGGE F VG WIK QR   AAGTLSA+R   L  +    +  D  W+A+F AW  A  +G ++ RTSV ++G++  VG WQ   R ++  L  ER+N LN A F WEGKYG
Sbjct:  392 MFAMWKLAREQGDIIRTTRITVDGEEYAVGIWQSNQRTLIKNSMLSDERVATLKEAGFKTVCRPRQPWDVNFNAWRLACTEGAVGQRTTYTMGGEEFAVGLWIKHQRKADAAGTLSAQRSAMLKTVPQ-SSMLDAEWNASFKAWCMARDRGGMSKRTSVEMEGKQCEVGAWQANLRKRKDLLPNERVNKLNQAGFRWEGKYG 592
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BLAST of jgi.p|Trimin1|163956 vs. uniprot
Match: A0A419GY01_9BACT (Uncharacterized protein n=1 Tax=Nitrospiraceae bacterium TaxID=2026770 RepID=A0A419GY01_9BACT)

HSP 1 Score: 80.1 bits (196), Expect = 4.490e-15
Identity = 53/177 (29.94%), Postives = 76/177 (42.94%), Query Frame = 1 
Query:   85 IGIWQQNQRAYWRDGTLSADRVAKLEKAGMLKSVQPK---QPWDVNYEAWRLASAEGPIAQASTYTMGGETFKVGFWIKKQRAYHAAGTLSAERITKLAAIKHIGNKRDETWSATFNAWRTAHAQGKVTARTSVIIDGEKYNVGNWQNQQRA--KRANLSTERINALNAALFSWEGK 600
            +G WQ NQR Y+++  L  +R+ +LE+ G + S + K   +PWD  Y    +       A A       E F +G W   QR  +    LS ++I +L  I       +E +   F        Q             E YN+G WQN QRA  K+  LS +RI  L    F W+ K
Sbjct:   24 LGSWQSNQRYYYKNSKLDTERIKRLEEIGFIWSEKRKFMLKPWDFWYGLTLICKEHTSNANAPHDYKTPEGFYLGRWQSNQRKNYKKNVLSHDKIKRLEDIGFKWTPFEEAFEKGFQETLRYKEQTDDANVLQSYKTSENYNLGTWQNTQRANYKKGILSADRIKRLEEIGFKWKLK 200
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BLAST of jgi.p|Trimin1|163956 vs. uniprot
Match: A0A1Y6GFX8_9BACI (Superfamily II DNA or RNA helicase n=1 Tax=Bacillus sp. OV166 TaxID=1882763 RepID=A0A1Y6GFX8_9BACI)

HSP 1 Score: 75.9 bits (185), Expect = 1.910e-12
Identity = 57/187 (30.48%), Postives = 82/187 (43.85%), Query Frame = 1 
Query:   73 EECNIGIWQQNQRAYWRDGTLSADRVAKLEKAGM------LKSVQPKQPWDVNYEAWRLASAEGPIAQASTYTMGGETFKVGFWIKKQRAYHAAGTLSAERITKLAAIKHIGNKRDETWSATFNAWRTAHAQ---GKVTARTSVIIDGEKYN--VGNWQNQQRAKRAN--LSTERINALNAALFSWE 594
            E  ++  W  NQR Y++ GTLS +RV +L + G       LK +  ++ W+  Y+   L + +      S      E   +  WI  QR Y+  GTLS ER+ +L  +  I       W A  N W     Q    K     S++  G K N  + NW  +QR    +  LS ERI  LN   F W+
Sbjct:  728 ENPSLASWISNQRTYYKTGTLSQERVERLNELGFVWGRGDLKKINLEEQWEEKYQ--ELLAFKEKHGHCSVPQGFKENPSLASWISNQRTYYKTGTLSQERVERLNELGFI-------WEAFENQWEKNFQQLISFKDKYGHSLVPKGYKENPALANWIAKQRISYNDRTLSQERIERLNELGFIWD 905
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BLAST of jgi.p|Trimin1|163956 vs. uniprot
Match: A0A117Q0Y2_9ACTN (Uncharacterized protein n=2 Tax=Streptomyces yokosukanensis TaxID=67386 RepID=A0A117Q0Y2_9ACTN)

HSP 1 Score: 72.4 bits (176), Expect = 3.020e-11
Identity = 54/174 (31.03%), Postives = 80/174 (45.98%), Query Frame = 1 
Query:   85 IGIWQQNQRAYWRDGTLSADRVAKLEKAGMLKSVQPKQPWDVNY-EAWRLASAEGPIAQASTYTMGGETFKVGFWIKKQRAYHAAGTLSAERITKLAAIKHIGNKRDETWSATF-NAWRTAHAQGKVTARTSVIIDGEKYNVGNW-QNQQRAKRANLSTE-RINALNAALFSWE 594
            IG W   QR  +R G LSADR+A L++ GM+   +    W  NY EA       G +    ++T       +G WI +QR  + AG LS E+I  L  I  +    D+ W   + +A      QG +    S  +  + + +G W  NQ+RA+R     E +I AL      W+
Sbjct:  580 IGQWIGWQRMAYRQGKLSADRIAALDQLGMVWD-KALTAWQDNYGEAQAYYDERGDLLVPGSHTASSGC-SLGTWIARQRKDYEAGRLSTEQIVLLDEIGMVWRPLDDAWQQAYQHACAYRERQGHLDV-PSTYVTSDGFRLGTWIANQRRARREERLPEVKIRALEVLGVVWD 750
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BLAST of jgi.p|Trimin1|163956 vs. uniprot
Match: UPI0015D70749 (helicase associated domain-containing protein n=1 Tax=Chlamydia suis TaxID=83559 RepID=UPI0015D70749)

HSP 1 Score: 72.0 bits (175), Expect = 4.000e-11
Identity = 48/176 (27.27%), Postives = 81/176 (46.02%), Query Frame = 1 
Query:   85 IGIWQQNQRAYWRDGTLSADRVAKLEKAGMLKSVQPKQPWDVNY-EAWRLASAEGPIAQASTYTMGGETFKVGFWIKKQRAYHAAGTLSAERITKLAAIKHIGNKRDETWSATF---NAWRTAHAQGKVTARTSVIIDGEKYNVGNWQNQQRA--KRANLSTERINALNAALFSWE 594
            +G+W  +QRA +++G LS D++A+L++ G +  V  ++ W+ N+ E  R     G       Y    +   +G W   QR    +  LS +RI +L  I  + +  +E W   F     ++  H   KV  R     D     +G+W + QR   K+  LS ++I  L    F W+
Sbjct:  511 LGVWVSHQRAGFKEGKLSEDKIARLKELGFVWDVF-EEVWEKNFLELQRFREEHGHCKVPQRYPQNPD---LGSWASVQRKTFKSSELSEDRIARLEEIGFVWDVTEEAWEKNFLELKRFQEEHGHCKVPQRYPQNPD-----LGSWVSTQRVDFKKGKLSEDKIERLEELGFVWD 677
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BLAST of jgi.p|Trimin1|163956 vs. uniprot
Match: A0A100WCY0_9MYCO (Putative helicase n=3 Tax=Mycobacteriaceae TaxID=1762 RepID=A0A100WCY0_9MYCO)

HSP 1 Score: 69.3 bits (168), Expect = 5.160e-11
Identity = 47/151 (31.13%), Postives = 72/151 (47.68%), Query Frame = 1 
Query:   82 NIGIWQQNQRAYWRDGTLSADRVAKLEKAGMLKSVQPKQPWDVNYEAWRLASAEGPIAQASTYTMGGETFKVGFWIKKQRAYHAAGTLSAERITKLAAIKH-IGNKRDETWSATFNAWRTAHAQGKVT--ARTSVIIDGEKYNVGNWQNQQ 525
            ++G+W  NQR  +R+ TL AD++ +LE           Q WD  + A            A+  + GG    +G W+  QR  +  G L+AERI +L A+   + + R  TW A F A R   A+   T   R  V  DG  + +G+W ++Q
Sbjct:   26 DLGMWVANQRRAYRESTLGADQIERLELLPGWVWEPHSQRWDEMFRAVATHLDTDQEIPAAAVSEGGHP--LGAWVGAQRVAYRRGALTAERIARLEALPGWVWSYRQSTWEAGFEALRRYAAEHGRTDVPRDHVTADG--FRLGDWVHRQ 172
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BLAST of jgi.p|Trimin1|163956 vs. uniprot
Match: UPI001E2C3BD3 (Helicase associated domain protein n=1 Tax=Chlamydia suis TaxID=83559 RepID=UPI001E2C3BD3)

HSP 1 Score: 70.1 bits (170), Expect = 1.960e-10
Identity = 47/175 (26.86%), Postives = 80/175 (45.71%), Query Frame = 1 
Query:   85 IGIWQQNQRAYWRDGTLSADRVAKLEKAGMLKSVQPKQPWDVNY-EAWRLASAEGPIAQASTYTMGGETFKVGFWIKKQRAYHAAGTLSAERITKLAAIKHIGNKRDETWSATF---NAWRTAHAQGKVTARTSVIIDGEKYNVGNWQNQQRA--KRANLSTERINALNAALFSW 591
            +  W  NQRAY+++G L+ +RVA+LE+ G +  V  K+ W+ N+ E  R     G       Y    +  ++  W+ KQR+    G L+ +++ +L  +  + N   E W   F     +R  H    V  +       +  ++G W + QRA  K   L+ ++I  L    F W
Sbjct:  995 LASWVSNQRAYFKEGKLAENRVARLEEIGFVWRVL-KEAWEENFLELQRFREEHGHCKVPEGYP---QNPQLASWVSKQRSDFKKGKLAEDKVARLEELGFVWNVLKEAWEENFLELQRFREEHGHCNVPHKYP-----QNPSLGVWVSHQRADFKEGKLAEDKIARLEEIGFVW 1160
[Close]
BLAST of jgi.p|Trimin1|163956 vs. uniprot
Match: UPI001178A55A (helicase associated domain-containing protein n=2 Tax=Chlamydia suis TaxID=83559 RepID=UPI001178A55A)

HSP 1 Score: 69.3 bits (168), Expect = 2.320e-10
Identity = 53/187 (28.34%), Postives = 75/187 (40.11%), Query Frame = 1 
Query:   73 EECNIGIWQQNQRAYWRDGTLSADRVAKLEKAGMLKSVQPKQPWDVNYEAW--------RLASAEGPIAQASTYTMGGETFKVGFWIKKQRAYHAAGTLSAERITKLAAIKHIGNKRDETWSATF---NAWRTAHAQGKVTARTSVIIDGEKYNVGNWQNQQRA--KRANLSTERINALNAALFSWE 594
            E   +  W  NQRA +++G LS DR+A+LE+ G +        WDV  EAW        R     G       Y    E  ++  W+  QRA    G LS + I +L  I  + +  +E W   F     ++  H    V        D     +G+W   QR   K   LS +RI  L    F W+
Sbjct:   64 ENPQLASWVSNQRADFKEGKLSEDRIARLEEIGFV--------WDVTEEAWEENFLELKRFQEEHGHCKVPQRYP---ENPQLASWVSNQRADFKEGKLSEDGIARLEEIGFVWDVTEEAWEEHFLELKRFQEEHGHCNVPRWYPENPD-----LGSWVKAQRKTFKSGELSEDRIARLEELGFVWD 234
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BLAST of jgi.p|Trimin1|163956 vs. uniprot
Match: A0A1H8YPJ6_9PSEU (Helicase conserved C-terminal domain-containing protein n=1 Tax=Amycolatopsis saalfeldensis TaxID=394193 RepID=A0A1H8YPJ6_9PSEU)

HSP 1 Score: 68.6 bits (166), Expect = 6.310e-10
Identity = 53/182 (29.12%), Postives = 81/182 (44.51%), Query Frame = 1 
Query:   82 NIGIWQQNQRAYWRDGTLSADRVAKLEKAGML------KSVQPKQPWDVNYEAWRLASAEGPIAQASTYTMGGETFKVGFWIKKQRAYHAAGTLSAERITKLAAIKHIGNKRDETWSATF---NAWRTAHAQGKVTARTSVIIDGEKYNVGNWQNQQRAKRA--NLSTERINALNAALFSWE 594
            N+  W QNQR Y  +G+LSA+R+A L K G L      K  + ++ W   Y    +++A G     S    G  T +   W+  Q   +  G L  ER   L AI    +++  TW A +   +A+R      KV      + D     + +W+N+QR+ R    L  + I  LN   F W+
Sbjct:  869 NLYAWCQNQRGYRNNGSLSAERIALLNKIGFLWDLEQEKKARDRELWMRRYN--EVSAAMGEKKHPSRLPSGRSTERT--WLDNQAVAYRKGNLDPERRELLEAIGVTTDQKWATWLANYEELDAFRREEGHFKVPEDYRTVDDVA---LASWKNRQRSFRNLDKLGDKEIALLNKIGFPWD 1043
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|163956 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 22
Match NameE-valueIdentityDescription
A0A836CF46_9STRA4.920e-140100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YZ94_9STRA1.060e-8370.17Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZHQ4_9STRA8.360e-7765.19Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z4J9_9STRA2.940e-6353.44Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YNS1_9STRA2.090e-6153.26Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YWG6_9STRA5.310e-5852.94Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CDJ7_9STRA5.370e-5749.73Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZI44_9STRA2.330e-5452.20Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836C9U7_9STRA7.010e-4746.70Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YSQ3_9STRA1.290e-3438.04Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]

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BLAST of jgi.p|Trimin1|163956 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YZA1_9STRA5.190e-152100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YMR6_9STRA9.570e-6149.50P-loop containing nucleoside triphosphate hydrolas... [more]
A0A419GY01_9BACT4.490e-1529.94Uncharacterized protein n=1 Tax=Nitrospiraceae bac... [more]
A0A1Y6GFX8_9BACI1.910e-1230.48Superfamily II DNA or RNA helicase n=1 Tax=Bacillu... [more]
A0A117Q0Y2_9ACTN3.020e-1131.03Uncharacterized protein n=2 Tax=Streptomyces yokos... [more]
UPI0015D707494.000e-1127.27helicase associated domain-containing protein n=1 ... [more]
A0A100WCY0_9MYCO5.160e-1131.13Putative helicase n=3 Tax=Mycobacteriaceae TaxID=1... [more]
UPI001E2C3BD31.960e-1026.86Helicase associated domain protein n=1 Tax=Chlamyd... [more]
UPI001178A55A2.320e-1028.34helicase associated domain-containing protein n=2 ... [more]
A0A1H8YPJ6_9PSEU6.310e-1029.12Helicase conserved C-terminal domain-containing pr... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_28contigContig_28:215884..216429 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|163956|e_gw1.28.74.1
Hectar predicted targeting categoryother localisation
TranscriptId164278
TrackFilteredModels1
ProteinId163956
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|163956gene_8977Tribonema minus UTEX_B_3156 geneContig_28 215884..216429 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_8977_1exon_8977_1Tribonema minus UTEX_B_3156 exonContig_28 215884..216429 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_8977CDS_8977Tribonema minus UTEX_B_3156 CDSContig_28 215884..216429 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|163956Trimin1|163956|e_gw1.28.74.1Tribonema minus UTEX_B_3156 polypeptideContig_28 215884..216429 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_8977 ID=mRNA_8977|Name=jgi.p|Trimin1|163956|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=546bp|location=Sequence derived from alignment at Contig_28:215884..216429- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGACAGGGCTGCAGCAGGCGGCCGCATTGAGGTGATGCAGTGGCTGCG
CCACGAGCAGTCGCTGCCATTCACGCCTCACACCATGACGATTGCAGCTA
CCTTTGGGCACTTAACTACTCTGCAGTGGCTGCATCAGGTAGGCTGCCCG
CACGACATCGCATGCATCTGCGAGCTGAGCTTCCAAGAGGGCGTGGCTCG
CGCAACTCCGTCGCAGATGGAGTGGCTGCGAAGCGTAGGGGGCAGTTGGA
GCTGTGAGATGGTGACACACGCGTTGTTTGGCTTGTTCGGGCATGATACC
CCCACCTTCAACTTGAAGCAAATGATCAGCTGGCTGCGCAGCGAAGGCGC
CACATGGCCGCAGCTCAGCGAAGTTGCTGATGCTGTTGGTGCTGATGAAC
TCGATGCAGCAGCGGTCTTGTGGGCAGCACAGCAGGGCTGCCCCTGGGGT
GACTGGACACCAGACTACTGTGATGATGTGTCGCTTGGGCGGTACAGCAT
CAAGAAAGCACTTCACGACGCCGGATGCCCGTGCCAGTGTGAATGA
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protein sequence of jgi.p|Trimin1|163956

>Trimin1|163956|e_gw1.28.74.1 ID=Trimin1|163956|e_gw1.28.74.1|Name=jgi.p|Trimin1|163956|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=182bp
MDRAAAGGRIEVMQWLRHEQSLPFTPHTMTIAATFGHLTTLQWLHQVGCP
HDIACICELSFQEGVARATPSQMEWLRSVGGSWSCEMVTHALFGLFGHDT
PTFNLKQMISWLRSEGATWPQLSEVADAVGADELDAAAVLWAAQQGCPWG
DWTPDYCDDVSLGRYSIKKALHDAGCPCQCE*
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mRNA from alignment at Contig_28:215884..216429-

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_8977 ID=mRNA_8977|Name=jgi.p|Trimin1|163956|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=546bp|location=Sequence derived from alignment at Contig_28:215884..216429- (Tribonema minus UTEX_B_3156 )
ATGGACAGGGCTGCAGCAGGCGGCCGCATTGAGGTGATGCAGTGGCTGCG
CCACGAGCAGTCGCTGCCATTCACGCCTCACACCATGACGATTGCAGCTA
CCTTTGGGCACTTAACTACTCTGCAGTGGCTGCATCAGGTAGGCTGCCCG
CACGACATCGCATGCATCTGCGAGCTGAGCTTCCAAGAGGGCGTGGCTCG
CGCAACTCCGTCGCAGATGGAGTGGCTGCGAAGCGTAGGGGGCAGTTGGA
GCTGTGAGATGGTGACACACGCGTTGTTTGGCTTGTTCGGGCATGATACC
CCCACCTTCAACTTGAAGCAAATGATCAGCTGGCTGCGCAGCGAAGGCGC
CACATGGCCGCAGCTCAGCGAAGTTGCTGATGCTGTTGGTGCTGATGAAC
TCGATGCAGCAGCGGTCTTGTGGGCAGCACAGCAGGGCTGCCCCTGGGGT
GACTGGACACCAGACTACTGTGATGATGTGTCGCTTGGGCGGTACAGCAT
CAAGAAAGCACTTCACGACGCCGGATGCCCGTGCCAGTGTGAATGA
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Coding sequence (CDS) from alignment at Contig_28:215884..216429-

>mRNA_8977 ID=mRNA_8977|Name=jgi.p|Trimin1|163956|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=546bp|location=Sequence derived from alignment at Contig_28:215884..216429- (Tribonema minus UTEX_B_3156 )
ATGGACAGGGCTGCAGCAGGCGGCCGCATTGAGGTGATGCAGTGGCTGCG
CCACGAGCAGTCGCTGCCATTCACGCCTCACACCATGACGATTGCAGCTA
CCTTTGGGCACTTAACTACTCTGCAGTGGCTGCATCAGGTAGGCTGCCCG
CACGACATCGCATGCATCTGCGAGCTGAGCTTCCAAGAGGGCGTGGCTCG
CGCAACTCCGTCGCAGATGGAGTGGCTGCGAAGCGTAGGGGGCAGTTGGA
GCTGTGAGATGGTGACACACGCGTTGTTTGGCTTGTTCGGGCATGATACC
CCCACCTTCAACTTGAAGCAAATGATCAGCTGGCTGCGCAGCGAAGGCGC
CACATGGCCGCAGCTCAGCGAAGTTGCTGATGCTGTTGGTGCTGATGAAC
TCGATGCAGCAGCGGTCTTGTGGGCAGCACAGCAGGGCTGCCCCTGGGGT
GACTGGACACCAGACTACTGTGATGATGTGTCGCTTGGGCGGTACAGCAT
CAAGAAAGCACTTCACGACGCCGGATGCCCGTGCCAGTGTGAATGA
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