mRNA_8935 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|349863 vs. uniprot
Match: A0A836CBQ0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBQ0_9STRA) HSP 1 Score: 745 bits (1923), Expect = 3.340e-271 Identity = 381/381 (100.00%), Postives = 381/381 (100.00%), Query Frame = 1 Query: 1 MGQGDFDIIPSDLQCVPGYITFQEPAEHYYGRPGSDEHELIAASLARAADACAEAKTFGGRRKRRRVPLAPLAVPARACAEAAGRRFIDPDAGSASGIPIVAVEGAREAHGVCPCDRRRPRAELETAFGDRDYSSDVAHDPWWQRDARESTAHLQQRALRFLGEVLSLRETHVAVVSHGVFIEMLHDYFLRDWPGCAATRRVMNCDTCTYGFVMENGPPPQLGTYLNPSLLAKVVAAGMSLVEVAAACALWRKYVPGGAFTSSQECVASLITREGKASASQARLLAHVLAAGSAADGAVSQRALLRLLACFFPLQRATAPPLPPSIAHARAAYLKDLHGTELQDERALSAIIKGIVGSAAAAQSTSSCATSGGHSASATTE 1143 MGQGDFDIIPSDLQCVPGYITFQEPAEHYYGRPGSDEHELIAASLARAADACAEAKTFGGRRKRRRVPLAPLAVPARACAEAAGRRFIDPDAGSASGIPIVAVEGAREAHGVCPCDRRRPRAELETAFGDRDYSSDVAHDPWWQRDARESTAHLQQRALRFLGEVLSLRETHVAVVSHGVFIEMLHDYFLRDWPGCAATRRVMNCDTCTYGFVMENGPPPQLGTYLNPSLLAKVVAAGMSLVEVAAACALWRKYVPGGAFTSSQECVASLITREGKASASQARLLAHVLAAGSAADGAVSQRALLRLLACFFPLQRATAPPLPPSIAHARAAYLKDLHGTELQDERALSAIIKGIVGSAAAAQSTSSCATSGGHSASATTE Sbjct: 1 MGQGDFDIIPSDLQCVPGYITFQEPAEHYYGRPGSDEHELIAASLARAADACAEAKTFGGRRKRRRVPLAPLAVPARACAEAAGRRFIDPDAGSASGIPIVAVEGAREAHGVCPCDRRRPRAELETAFGDRDYSSDVAHDPWWQRDARESTAHLQQRALRFLGEVLSLRETHVAVVSHGVFIEMLHDYFLRDWPGCAATRRVMNCDTCTYGFVMENGPPPQLGTYLNPSLLAKVVAAGMSLVEVAAACALWRKYVPGGAFTSSQECVASLITREGKASASQARLLAHVLAAGSAADGAVSQRALLRLLACFFPLQRATAPPLPPSIAHARAAYLKDLHGTELQDERALSAIIKGIVGSAAAAQSTSSCATSGGHSASATTE 381
BLAST of jgi.p|Trimin1|349863 vs. uniprot
Match: A0A835YSK2_9STRA (Mannitol dehydrogenase rossman domain family n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSK2_9STRA) HSP 1 Score: 1608 bits (4164), Expect = 0.000e+0 Identity = 809/809 (100.00%), Postives = 809/809 (100.00%), Query Frame = 3 Query: 120 MAAAVDVEREQLMLEGLNLITSSRISELYSATATEDPLVLRRKAADFRKGYKNWRQKKPKGARGETNDLLDREKQHAHDVVEQEREMVQEAQEELDAAVGEYQPGLSRSQSFRMSGAEHHRGEHDGGRKNMRDRSGSQHREXXXXSLRRQASMQRTRSFHGEEELPHHDDQKENWLKFYVNPYSGMAEASTTEPVELTQAALKILPSSVLKPRFERTAHKPYVDKYICHLGVGGFHRSHQCVYTDDVLNLQAPGVGGHSAGLRWGFCGIGLMDWDRRMYETLKQQDYLYTVLSRGHKTNEARVIGSIVDFIFAPDDHQRCIDKLADPTTCIVSLTVTEKGYCQNTAGDLDMENPFVKADVEGNLQKPKTAIGMIVAALRQRRAKGTGPFTVLSCDNLPENGDKARHCVLQMADLIDPALKAWIVETTTFPNTMVDRITPVTDQEHKDILARDHLILDGWPVIAEDFSQWVVENSFCCGCPDWDKVGVLMVNDVKPYEFMKLRLLRRDPLSVFSLTLSCARSPSPSPYLQNGGHSALSYMACLCGYHYVDDAMNDAAIAGFIRRLFQEIVPTLSPVPGVDTQEYCEKLEYSEKLVERFPECRNPYIKDRLVRLTEDGSKKMQNTMRDAIVELTQRGLSTQVLALANAAWIRFCMGEDEEGQVLEIRDPIAVRLNHLARKALADPRSPNPREFLLEVHGPQLVACAGFVQEVAEHLKSLMASGAKSTLSAVITGGAAASAPQLVPVAATGGTNGDGQRDCGRRARSSESRSRWRLFPALGTAAREPRSTVTREAVERCNERRAFQLDGPGS 2546 MAAAVDVEREQLMLEGLNLITSSRISELYSATATEDPLVLRRKAADFRKGYKNWRQKKPKGARGETNDLLDREKQHAHDVVEQEREMVQEAQEELDAAVGEYQPGLSRSQSFRMSGAEHHRGEHDGGRKNMRDRSGSQHREXXXXSLRRQASMQRTRSFHGEEELPHHDDQKENWLKFYVNPYSGMAEASTTEPVELTQAALKILPSSVLKPRFERTAHKPYVDKYICHLGVGGFHRSHQCVYTDDVLNLQAPGVGGHSAGLRWGFCGIGLMDWDRRMYETLKQQDYLYTVLSRGHKTNEARVIGSIVDFIFAPDDHQRCIDKLADPTTCIVSLTVTEKGYCQNTAGDLDMENPFVKADVEGNLQKPKTAIGMIVAALRQRRAKGTGPFTVLSCDNLPENGDKARHCVLQMADLIDPALKAWIVETTTFPNTMVDRITPVTDQEHKDILARDHLILDGWPVIAEDFSQWVVENSFCCGCPDWDKVGVLMVNDVKPYEFMKLRLLRRDPLSVFSLTLSCARSPSPSPYLQNGGHSALSYMACLCGYHYVDDAMNDAAIAGFIRRLFQEIVPTLSPVPGVDTQEYCEKLEYSEKLVERFPECRNPYIKDRLVRLTEDGSKKMQNTMRDAIVELTQRGLSTQVLALANAAWIRFCMGEDEEGQVLEIRDPIAVRLNHLARKALADPRSPNPREFLLEVHGPQLVACAGFVQEVAEHLKSLMASGAKSTLSAVITGGAAASAPQLVPVAATGGTNGDGQRDCGRRARSSESRSRWRLFPALGTAAREPRSTVTREAVERCNERRAFQLDGPGS Sbjct: 1 MAAAVDVEREQLMLEGLNLITSSRISELYSATATEDPLVLRRKAADFRKGYKNWRQKKPKGARGETNDLLDREKQHAHDVVEQEREMVQEAQEELDAAVGEYQPGLSRSQSFRMSGAEHHRGEHDGGRKNMRDRSGSQHREXXXXSLRRQASMQRTRSFHGEEELPHHDDQKENWLKFYVNPYSGMAEASTTEPVELTQAALKILPSSVLKPRFERTAHKPYVDKYICHLGVGGFHRSHQCVYTDDVLNLQAPGVGGHSAGLRWGFCGIGLMDWDRRMYETLKQQDYLYTVLSRGHKTNEARVIGSIVDFIFAPDDHQRCIDKLADPTTCIVSLTVTEKGYCQNTAGDLDMENPFVKADVEGNLQKPKTAIGMIVAALRQRRAKGTGPFTVLSCDNLPENGDKARHCVLQMADLIDPALKAWIVETTTFPNTMVDRITPVTDQEHKDILARDHLILDGWPVIAEDFSQWVVENSFCCGCPDWDKVGVLMVNDVKPYEFMKLRLLRRDPLSVFSLTLSCARSPSPSPYLQNGGHSALSYMACLCGYHYVDDAMNDAAIAGFIRRLFQEIVPTLSPVPGVDTQEYCEKLEYSEKLVERFPECRNPYIKDRLVRLTEDGSKKMQNTMRDAIVELTQRGLSTQVLALANAAWIRFCMGEDEEGQVLEIRDPIAVRLNHLARKALADPRSPNPREFLLEVHGPQLVACAGFVQEVAEHLKSLMASGAKSTLSAVITGGAAASAPQLVPVAATGGTNGDGQRDCGRRARSSESRSRWRLFPALGTAAREPRSTVTREAVERCNERRAFQLDGPGS 809
BLAST of jgi.p|Trimin1|349863 vs. uniprot
Match: A0A835ZLG9_9STRA (Mannitol dehydrogenase rossman domain family n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZLG9_9STRA) HSP 1 Score: 934 bits (2413), Expect = 0.000e+0 Identity = 490/725 (67.59%), Postives = 560/725 (77.24%), Query Frame = 3 Query: 159 LEGLNLITSSRISELYSATATEDPLVLRRKAADFRKGYKNWRQKKPKGARGETNDLLDREKQHAHDVVEQEREMVQEAQEELDAAVGEYQPGLSRSQSFRMSGAEHHRGEHDGGRKNMRDR-SGSQHREXXXXSLRRQAS---MQRTRSFHGEEELPHHDDQKENWLKFYVNPYSGMAEASTTEPVELTQAALKILPSSVLKPRFERTAHKPYVDKYICHLGVGGFHRSHQCVYTDDVLNLQAPGVGGHSAGLRWGFCGIGLMDWDRRMYETLKQQDYLYTVLSRGHKTNEARVIGSIVDFIFAPDDHQRCIDKLADPTTCIVSLTVTEKGYCQNTAGDLDMENPFVKADVEGNLQKPKTAIGMIVAALRQRRAKGTGPFTVLSCDNLPENGDKARHCVLQMADLIDPALKAWIVETTTFPNTMVDRITPVTDQEHKDILARDHLILDGWPVIAEDFSQWVVENSFCCGCPDWDKVGVLMVNDVKPYEFMKLRLLRRDPLSVFSLTLSCARSPSPSPYLQNGGHSALSYMACLCGYHYVDDAMNDAAIAGFIRRLFQEIVPTLSPVPGVDTQEYCEKLEYSEKLVERFPECRNPYIKDRLVRLTEDGSKKMQNTMRDAIVELTQRGLSTQVLALANAAWIRFCMGEDEEGQVLEIRDPIAVRLNHLARKALADPRSPNPREFLLEVHGPQLVACAGFVQEVAEHLKSLMASGAKSTLSAVITGGA 2321 ++ LNLI SS+I +LYS+T TEDPLVLR+KAADFRKGYKNWRQKKPKGARGETN LLD+EKQHAHDVV E +MV EAQEEL A + +P ++RS S + + E ++++R+R SGS R AS M RTRSFHGE++ H DD++ENWLKFYVNP++GMAEAS TEPVELTQAALK+LP SVLKP + R K YVDKYICH+GVGGFHRSHQCVYTDD+LN Q G G+RWGFCGIGLMDWDR+MY+TLK+QDYLYTVLSR KTNEARVIGSIVDF+FAPDDHQ CID+LADP+TCIVSLTVTEKGYCQN+ GDLD ENPFV+AD++GNL KPKTAIGMIVAALRQRRAKG FTVLSCDNLPENGDKA+HC AWI TTFPNTMVDRITP+T+QEHKDILARDHLILDGWPVIAEDF QWVVEN FC GCP+WDKVGVLMVNDV+PYEFMKLRLL NGGHSALSYM+ LCGY YVDDAM +A IA +I RLF E+VPTL VPGV EYC+KL +ERF NPYIKD+L+RL EDGSKKMQNTMRDAI+EL +RGLST+VLALANAAWIR+C+G+DE G LEI+DP+A L LA ALAD ++P+P EFL +VHG L ACAGFV EV HL+S+M+ G+K+TL AVI GA Sbjct: 10 VDALNLINSSQIGQLYSSTNTEDPLVLRKKAADFRKGYKNWRQKKPKGARGETNYLLDKEKQHAHDVVTAEEQMVLEAQEELGAFM---EPHMTRSDSMELRASL----EQLSRKESVRERGSGSIPRGAAATPDAHHASIGSMTRTRSFHGEDDFIH-DDERENWLKFYVNPFAGMAEASATEPVELTQAALKVLPPSVLKPAYARPVAKAYVDKYICHMGVGGFHRSHQCVYTDDLLNAQGSG------GVRWGFCGIGLMDWDRKMYDTLKKQDYLYTVLSRSSKTNEARVIGSIVDFVFAPDDHQHCIDRLADPSTCIVSLTVTEKGYCQNSEGDLDTENPFVRADLDGNLAKPKTAIGMIVAALRQRRAKGVPSFTVLSCDNLPENGDKAKHC-------------AWISANTTFPNTMVDRITPMTEQEHKDILARDHLILDGWPVIAEDFMQWVVENDFCLGCPEWDKVGVLMVNDVRPYEFMKLRLL-------------------------NGGHSALSYMSILCGYTYVDDAMANADIAAYIGRLFHEVVPTLMSVPGVSAPEYCDKL------IERFS---NPYIKDKLMRLAEDGSKKMQNTMRDAILELQKRGLSTKVLALANAAWIRYCVGKDENGDPLEIKDPMAAALTKLAEHALADVKNPDPTEFLRQVHGQDLAACAGFVGEVKGHLRSMMSIGSKATLQAVIEAGA 673
BLAST of jgi.p|Trimin1|349863 vs. uniprot
Match: D7FJL9_ECTSI (Mannitol dehydrogenase rossman domain family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJL9_ECTSI) HSP 1 Score: 705 bits (1819), Expect = 6.930e-243 Identity = 394/729 (54.05%), Postives = 485/729 (66.53%), Query Frame = 3 Query: 159 LEGLNLITSSRISELYSATATEDPLVLRRKAADFRKGYKNWRQKKPKGARGETNDLLDREKQHAHDVVEQEREMVQEAQEELDAAVGEYQPGLSRSQSFRMSGAEHHRGEHDGGRKNMRDRSGSQHREXXXXSLRRQASMQRTRSFHGEEELPHHDD--QKENWLKFYVNPYSGMAEASTTEPVELTQAAL-KILPSSVLKPRFERTAHKPYVDKYICHLGVGGFHRSHQCVYTDDVLNLQAPGVGGHSAGL---RWGFCGIGLMDWDRRMYETLKQQDYLYTVLSRGHKTNEARVIGSIVDFIFAPDDHQRCIDKLADPTTCIVSLTVTEKGYCQNTAGDLDMENPFVKADVEGNLQKPKTAIGMIVAALRQRRAKGTGPFTVLSCDNLPENGDKARHCVLQMADLIDPALKAWIVETTTFPNTMVDRITPVTDQEHKDILARDHLILDGWPVIAEDFSQWVVENSFCCGCPDWDKVGVLMVNDVKPYEFMKLRLLRRDPLSVFSLTLSCARSPSPSPYLQNGGHSALSYMACLCGYHYVDDAMNDAAIAGFIRRLFQEIVPTLSPVPGVDTQEYCEKLEYSEKLVERFPECRNPYIKDRLVRLTEDGSKKMQNTMRDAIVELTQRGLSTQVLALANAAWIRFCMGEDEE-GQVL--EIRDPIAVRLNHLARKALADPRS---PNPREFLLEVHGPQLVACAGFVQEVAEHLKSLMASGAKSTLSAVI 2309 ++GLNLITS++I ELY+ TEDPLVLR+KAADFRKGY NWR KK KGARGET LLD+EK HA DV + M DA L+R S D G L R+ S+ R S EL DD +KENWLKFYVNPYSGMAEA TEPV L Q L K++P+SV+KP+++R ++D Y+CH+GVGGFHRSHQ VYTDD+LNL A + A +WG GIGLM WD +MY LK+QD+LYT+LSRGH +EARV+GSIVDF+FAP++HQ IDKL+D T IVSLTVTEKGYCQ+ GDLD N VK+D++G+L KP +AIGMIVAALRQRR GT FTVLSCDNLPENGDK +H VLQMA + P L+ W+ TTFPNTMVDRITP+T+ EH +++ARD+++ D WPVIAEDFSQWV+E++FC G P WDKVG L+V DVKPYEFMKLRLL NGGHS LSY++ LCGY YVDDAM D I+GFI FQEI PTL PVPGVDT+ Y KLVERF NPYIKD+L RL EDGSKKM NT+++A++EL ++GLST+V+ALANAAWIR+ G+ G V+ I+DP+A L LA +A+ + P P +++ V G ++V GFV+E+ + LKS++ GA TL V+ Sbjct: 5 IDGLNLITSAKIHELYAKQDTEDPLVLRKKAADFRKGYGNWRSKKSKGARGETGYLLDKEKLHATDVHHTDIVM--------DAVP------LTRVNSTEQL--------------KQPDTPGR--------GLSRRGSLFRCNSIIDGNEL---DDGKEKENWLKFYVNPYSGMAEAELTEPVALNQGNLEKVIPASVVKPKYQRPGDGRFIDHYMCHMGVGGFHRSHQAVYTDDLLNLAASLEAENGAPTDVKKWGIVGIGLMPWDSKMYNILKEQDHLYTLLSRGHTGSEARVVGSIVDFMFAPENHQAVIDKLSDAETRIVSLTVTEKGYCQDVNGDLDRTNALVKSDLDGDLAKPSSAIGMIVAALRQRRNNGTPSFTVLSCDNLPENGDKIKHVVLQMAGYVSPELREWVEANTTFPNTMVDRITPMTEAEHIELVARDYMVKDSWPVIAEDFSQWVIEDNFCDGMPAWDKVGGLVVKDVKPYEFMKLRLL-------------------------NGGHSCLSYISVLCGYSYVDDAMADPQISGFISAFFQEIAPTLLPVPGVDTK------TYQAKLVERFG---NPYIKDKLTRLAEDGSKKMPNTLKEAVMELREKGLSTKVIALANAAWIRYMTGKGPIWGDVIIQGIKDPLAAELQDLAEEAINGVDTGAEPKPEKYIELVFGQEIVELEGFVEEIKDCLKSIVNKGAPVTLEEVM 660
BLAST of jgi.p|Trimin1|349863 vs. uniprot
Match: R9UHL6_SACJA (Mannitol dehydrogenase n=1 Tax=Saccharina japonica TaxID=88149 RepID=R9UHL6_SACJA) HSP 1 Score: 695 bits (1794), Expect = 4.420e-239 Identity = 387/726 (53.31%), Postives = 487/726 (67.08%), Query Frame = 3 Query: 159 LEGLNLITSSRISELYSATATEDPLVLRRKAADFRKGYKNWRQKKPKGARGETNDLLDREKQHAHDVVEQEREMVQEAQEELDAAVGEYQPGLSRSQSFRMSGAEHHRGEHDGGRKNMRDRSGSQHREXXXXSLRRQASMQRTRSFHGEEELPHHDDQKENWLKFYVNPYSGMAEASTTEPVELTQAAL-KILPSSVLKPRFERTAHKPYVDKYICHLGVGGFHRSHQCVYTDDVLNLQAP---GVGGHSAGLRWGFCGIGLMDWDRRMYETLKQQDYLYTVLSRGHKTNEARVIGSIVDFIFAPDDHQRCIDKLADPTTCIVSLTVTEKGYCQNTAGDLDMENPFVKADVEGNLQKPKTAIGMIVAALRQRRAKGTGPFTVLSCDNLPENGDKARHCVLQMADLIDPALKAWIVETTTFPNTMVDRITPVTDQEHKDILARDHLILDGWPVIAEDFSQWVVENSFCCGCPDWDKVGVLMVNDVKPYEFMKLRLLRRDPLSVFSLTLSCARSPSPSPYLQNGGHSALSYMACLCGYHYVDDAMNDAAIAGFIRRLFQEIVPTLSPVPGVDTQEYCEKLEYSEKLVERFPECRNPYIKDRLVRLTEDGSKKMQNTMRDAIVELTQRGLSTQVLALANAAWIRFCMGE-DEEGQ-VLEIRDPIAVRLNHLARKALADP---RSPNPREFLLEVHGPQLVACAGFVQEVAEHLKSLMASGAKSTLSAVI 2309 ++ LNLITS +I ELY+ TEDPLVLR+KAADFRKGY NWR KK KGARGETN D++K HA D + E+V LD L+R S M A D GS+ + R+ S+ R S +L H + KENWLKFYVNPYSGMAEA TEPV L QA L K++P++V+KP++ R ++D Y+CH+GVGGFHRSHQ VYTDD+LNL A G S +WG GIGLM WD +MY LK QD+LYT+LSRGH +EARV+GSIVDF+FAP++HQ IDKLA T IVSLT+TEKGYCQ+ GDLD N VK+D++G+L KP +AIGMIVAALR+R+ +GT FTVLSCDNLPENGDK +H VLQMA + L+ W+ TTFPNTMVDRITP+T+ EH +++ARD+++ D WPVIAEDFSQWVVE++FC G P+WDKVG L+V DVKPYEFMKLRLL NGGHS LSY++ LCGY+YVDDAM + I+GFI + F E+ PTL PVPGVDT L Y +KLVERF NPYIKD+L RL +DGSKKM NT+++A++EL+++GLST+V+ALANAAWIR+ +G E G+ +L I+DP A L LA +AL P P ++ V G ++V GFV E+ + L+S++ GA +TL V+ Sbjct: 5 IDALNLITSHKIHELYARQDTEDPLVLRKKAADFRKGYGNWRSKKSKGARGETNYPTDKDKLHATDAKHE--ELV------LDVVP------LTRVNSVEMLKAP--------------DTPGSR-------GVSRRGSLFRCNSIIDGNDLEAHQE-KENWLKFYVNPYSGMAEAELTEPVALNQANLEKVIPATVVKPQYARPGDGRFIDHYMCHMGVGGFHRSHQAVYTDDLLNLAASLEAKNGSPSDVKKWGIVGIGLMPWDSKMYNILKAQDHLYTLLSRGHTGSEARVVGSIVDFMFAPENHQAVIDKLAHVDTRIVSLTMTEKGYCQDVNGDLDRANALVKSDLDGDLAKPSSAIGMIVAALRKRKQEGTPSFTVLSCDNLPENGDKIKHVVLQMAGYVSAELREWVESNTTFPNTMVDRITPMTEVEHIELVARDYMVKDSWPVIAEDFSQWVVEDNFCNGMPEWDKVGALVVKDVKPYEFMKLRLL-------------------------NGGHSCLSYISVLCGYNYVDDAMANPLISGFIFQFFNEMSPTLLPVPGVDT------LTYQKKLVERFG---NPYIKDKLTRLAKDGSKKMANTLKEAVIELSEKGLSTKVIALANAAWIRYMVGRMPETGEAILGIKDPAADELRDLAVEALDGVDYGEEPKPERYIEFVFGAEIVELKGFVGEIKDLLRSIVTHGALTTLEDVM 660
BLAST of jgi.p|Trimin1|349863 vs. uniprot
Match: W7TIZ2_9STRA (Mannitol dehydrogenase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TIZ2_9STRA) HSP 1 Score: 471 bits (1212), Expect = 5.330e-151 Identity = 306/737 (41.52%), Postives = 407/737 (55.22%), Query Frame = 3 Query: 225 DPLVLRRKAADFRKGYKNWRQKKPKGARGETNDL-LDREKQHAHDVVEQEREMVQEAQEELDAAVGEYQPGLSRSQSFRMSGAEHHRGEHDGGRKNMRDRSGSQHREXXXXSLRRQASMQRTRSFHGEEELPHHD---DQKENWLKFYVNPYSGMAEASTTEPVELTQAALKILPSSVLK------PRFERTAHKPYVDKYICHLGVGGFHRSHQCVYTDDVLNLQAP-----GVGGHSAGL---RWGFCGIGLMDWDRRMYETLKQQDYLYTVLSRGHKTNEARVIGSIVDFIFAPDDHQRCIDKLADPTTCIVSLTVTEKGYCQNTAGDLDMENPFVKADVEGNLQKPKTAIGMIVAALRQRRAKGTGPFTVLSCDNLPENGDKARHCVLQMADL-IDPALKAWIVETTTFPNTMVDRITPVTDQEHKDILARDHLILDGWPVIAEDFSQWVVENSFCCGCPDWDKVGVLMVNDVKPYEFMKLRLLRRDPLSVFSLTLSCARSPSPSPYLQNGGHSALSYMACLCGYHYVDDAMNDAAIAGFIRRLFQEIVPTLSPVPGVDTQEYCEKLEYSEKLVERFPECRNPYIKDRLVRLTEDGSKKMQNTMRDAIVELTQRG---LSTQVLALANAAWIRFCMGEDEEGQVLE-IRDPIAVRLNHLARKAL---ADPRSP--------------------NPREFLLEVHGPQLVACAGFVQEVAEHLKSLMASGAKSTL 2297 DP L+RKA FR+GYKNWRQKKP GARGE DL RE++ A + E+ +Q + + +P S ++ SG H L + R +SF L D + +ENWLKFYVNP++ + + P+ L L+ + K P ++R+ PY I H+GVGGFHRSHQ V+TDD+L L G GG AG RW CGIGLM WD++MYE L QD++YTVL R K N+AR++GSI DF+FAPDD+Q L DP T IVSLT+TEKGYCQ G+L+ E+P VK D+ +L P+TA+GM+VAAL QRR G FTVLSCDN P+NG + V +MA L + L +WI + TTFPNTMVDRITP T+ HKDIL +D + D WPV+AE + QW+VE+ F G P W+ VGV+ V DVKPYE+MKLRLL NG HSALSY++ L G+ +VDDA+N+ I F+ +E+ + VPG+D ++Y + ++ RF NPY+KD++ RL DGS+K++NTMRDAI LT+ L T L +A AA+IR+ G D+EG+ +E + DPIA L AR A + P SP +P+E + V GP++ FV V E L+S+ G TL Sbjct: 52 DPHELQRKANKFRQGYKNWRQKKPFGARGEAKDLKAQREEEAAEEKEEEPAPKLQHGR-----TISSMEPTASGVEASVGSGTGHE----------------------VIIPLSPVKGLARRKSF--SVSLSAQDLTAEAEENWLKFYVNPFAELLDKKVG-PLPLCTKNLETILHRNFKSVRGKGPSYDRSPG-PY--SRIAHVGVGGFHRSHQAVFTDDLLELHKDKQAGNGKGGGKAGPPDDRWAICGIGLMTWDKKMYEALHGQDHMYTVLFRSQKGNDARIVGSIFDFVFAPDDYQALFSTLLDPATRIVSLTITEKGYCQKVDGNLNTEDPNVKHDLS-DLSTPRTALGMLVAALDQRRKAGRKSFTVLSCDNQPDNGHQLEKLVKEMAHLAVGSDLTSWIGDHTTFPNTMVDRITPATEAVHKDILKQDFGVEDEWPVVAEHYGQWIVEDKFVDGRPRWEDVGVMFVPDVKPYEYMKLRLL-------------------------NGTHSALSYVSHLSGFQFVDDALNNEQIRDFVECYMEEVSAAVPEVPGLDL------VQYKKDVLTRFS---NPYVKDKVERLMLDGSQKLRNTMRDAIKFLTEGSDPPLPTTYLGIAVAAYIRYVTGIDQEGEEIEKVLDPIAEELREPARLACCLRSLPPSPTDGESDSGEENEVSSGSESYDPKEVISIVFGPEIAKNKAFVGTVKEALESICKRGIMYTL 720
BLAST of jgi.p|Trimin1|349863 vs. uniprot
Match: A0A6S9IJX7_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9IJX7_HETAK) HSP 1 Score: 472 bits (1215), Expect = 9.350e-151 Identity = 313/816 (38.36%), Postives = 423/816 (51.84%), Query Frame = 3 Query: 159 LEGLNLITSSRISELYSATATEDPLVLRRKAADFRKGYKNWRQKKPKGARGETNDLLDREKQHAHDVVEQEREMVQEAQEELDAAVGEYQPGLSRSQSFRM------SGAEHHRGEHDGGR--------------------------------------KNMRDRSGSQHREXXXXSLRRQA-------------------------SMQRTRSFHGE--------EELPHH----DDQKENWLKFYVNPYSGMA--EASTTEPVELTQAALKILPSSVLKPRFERTAHKPYVDKYICHLGVGGFHRSHQCVYTDDVLNLQA-------------PGVGGHSAGLRWGFCGIGLMDWDRRMYETLKQQDYLYTVLSRGHKTNEARVIGSIVDFIFAPDDHQRCIDKLADPTTCIVSLTVTEKGYCQNTAGDLDMENPFVKADVEGNLQKPKTAIGMIVAALRQRRAKGTGPFTVLSCDNLPENGDKARHCVLQMADLIDPALKAWIVETTTFPNTMVDRITPVTDQEHKDILARDHLILDGWPVIAEDFSQWVVENSFCCGCPDWDKV-GVLMVNDVKPYEFMKLRLLRRDPLSVFSLTLSCARSPSPSPYLQNGGHSALSYMACLCGYHYVDDAMNDAAIAGFIRRLFQEIVPTLSPVPGVDTQEYCEKLEYSEKLVERFPECRNPYIKDRLVRLTEDGSKKMQNTMRDAIVELTQRGLSTQVLALANAAWIRFCMGEDEEGQVLE-IRDPIAVRLNHLARKALADPRSPNPREFLLE-VHGPQLVACAGFVQEVAEHLKSLMASGAKSTLSAVI 2309 L+ LNLITSS I ++Y TEDPLVLR+KA FR GYKNWR KKPKGA GE +L + + + A VV A A V E S + + A H G H GG+ K +R RSG+ R + + ++S HG + L HH D +K++WLKF VNPYS A + S + L+Q L LP PR+ER A D +ICHLGVGGFHRSHQ Y +L Q P RWGFCG+GLM+WD++MY+TL +Q++L+T++SRGH + A V+GSI+DF++AP D + +LADP+T +VSLT+TEKGYCQN G+LD EN +K D+E N P +AIG+I ALR RRA G PFTVLSCDNLP NG K + +LQ +L+ P L ++ FPNTMVDRITPVT+ EH +I D+ + DGWPV AE+F QWV+E+SF P W+ + GVL+V DV YE+MKLRLL NG HSALSY + L G+ +VDD++ D + F+++ E+ T+ PVPGVD Y L +RF NPYIKD+L+RL EDGS+K+ TMRD ++EL +G + LA A A +++F G D +GQ +E I+DP L +A++ P P + V G + + ++ LK L+ G ++ L +++ Sbjct: 8 LDALNLITSSDIGKVYEGQDTEDPLVLRQKAKSFRNGYKNWRMKKPKGATGEVTNLTETQPKMAGGVV---------AGAIRQAPVAELVGATSSTNELAVLTRLASQQALHSMGAHMGGQPHELALPEDREAELPELGASVLSPAGSFRHVPIETLSLKGVRSRSGTAEAAASADRSRNETLDDDQVDIAYITFDFEDEITTKVEHDLNISQSRHGAAGPQAAPVDSLSHHELLGDKRKQSWLKFMVNPYSSAAAVDESISGAQPLSQMNLGRLPLIDELPRYERKA-----DHWICHLGVGGFHRSHQANYLHLLLQQQHKERIKRRLRASQNPDAPPXXXEPRWGFCGVGLMEWDKKMYDTLSRQNHLFTLVSRGHGGSRASVVGSIMDFVYAPADRAASVARLADPSTHLVSLTITEKGYCQNVQGELDQENSLIKHDLE-NPTLPCSAIGLITEALRVRRAAGRPPFTVLSCDNLPMNGSKTKRTILQYCELVYPDLVPFMQSEVCFPNTMVDRITPVTEPEHIEICKLDYGVEDGWPVFAEEFMQWVIEDSFNGPRPAWEALPGVLVVPDVHSYEWMKLRLL-------------------------NGTHSALSYPSYLSGFRFVDDSLRDQLLGSFVKKYMDEVTHTVPPVPGVDLG------AYKTALFDRFS---NPYIKDKLMRLAEDGSQKLVTTMRDPMLELAAQGKPIKHLAAAIACFLKFTTGYDLQGQPIEGIKDPRLEELKGPCLEAVSSAGDPAPTAIVCGMVFGENVKHSETCISAISSALKLLVEEGIEALLKSLL 774
BLAST of jgi.p|Trimin1|349863 vs. uniprot
Match: A0A7S4LMH2_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4LMH2_9EUGL) HSP 1 Score: 462 bits (1188), Expect = 8.200e-148 Identity = 263/554 (47.47%), Postives = 348/554 (62.82%), Query Frame = 3 Query: 636 ENWLKFYVNPYSGMAEASTTEPVELTQAALKILPSSVLK---PRFERTAHKPYVDKYICHLGVGGFHRSHQCVYTDDVLNLQAPGVGGHSAGLRWGFCGIGLMDWDRRMYETLKQQDYLYTVLSRGHKTNEARVIGSIVDFIFAPDDHQRCIDKLADPTTCIVSLTVTEKGYCQNTAGDLDMENPFVKADVEGNLQKPKTAIGMIVAALRQRRAKGTGPFTVLSCDNLPENGDKARHCVLQMADLIDPALKAWIVETTTFPNTMVDRITPVTDQEHKDILARDHLILDGWPVIAEDFSQWVVENSFCCGCPDWDKVGVLMVNDVKPYEFMKLRLLRRDPLSVFSLTLSCARSPSPSPYLQNGGHSALSYMACLCGYHYVDDAMNDAAIAGFIRRLFQEIVPTLSPVPGVDTQEYCEKLEYSEKLVERFPECRNPYIKDRLVRLTEDGSKKMQNTMRDAIVELTQRGLSTQVLALANAAWIRFCMGEDEEGQVLE-IRDPIAVRLNHLARKALADPRSPNPREFLLEVHGPQLVACAGFVQEVAEHLKSLMASGA 2285 E+W KFY+ PY+ EA + + ++ A L++ K P ++R+A D ++ HLGVGGFHRSHQ VYTD +L+ + +G CG+GLM WD +MY+T+ QD LYTVLSR +A V+G+I+++IFAPDDH I+KLA P T IVSLTVTEKGYCQN AG LDM NP V D++ +L P+TA+GMI A + +R+ +G TVLSCDN+PENGD + +L+ +DPAL+ W+ E T+FPNTMVDRITPVT+++H+ IL + I D WPV+AE + QWVVE+ F G PDW+KVGVL V DVKPYE+MKLRLL NGGHSAL+Y++ L G+ +VD AM DAA+ GF+ Q + P + VPGV+ EYS+ LV+RF NPYIKD++ RL EDGSKK+ NTMR I+ELT STQ +A A A +I+F G D G + IRDP A L + L S + E LL V G ++VA + FVQEV+ L+S++ GA Sbjct: 177 EHWTKFYITPYT---EAPKKKILPVSTAMLELHMEQACKAKMPTYKRSA-----DYWMVHLGVGGFHRSHQAVYTDLLLHYYENQKDAEPDEV-FGICGMGLMPWDSKMYQTMLDQDNLYTVLSRSDAGTDAHVVGAIMEYIFAPDDHDVAIEKLAAPETRIVSLTVTEKGYCQNVAGVLDMSNPMVMHDLQ-DLDHPQTALGMITAGMLRRKERGMDSLTVLSCDNMPENGDTFKKILLEFVHHVDPALEEWMKEHTSFPNTMVDRITPVTEEQHRIILKDEFGIDDQWPVVAEHYGQWVVEDHFVGGRPDWEKVGVLFVPDVKPYEYMKLRLL-------------------------NGGHSALAYLSYLAGHLFVDLAMGDAAVGGFVVTYLQSLKPCIPEVPGVNLD------EYSDMLVKRFS---NPYIKDKVERLAEDGSKKLYNTMRGPILELTHLHKSTQCIATAVAGFIKFMSGTDVHGTPIPCIRDPQAAVLQ---QPCLNSCLSFDATEPLLIVFGKEVVALSNFVQEVSIALQSIVVDGA 683
BLAST of jgi.p|Trimin1|349863 vs. uniprot
Match: A0A0G4EHR3_VITBC (Uncharacterized protein n=3 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EHR3_VITBC) HSP 1 Score: 441 bits (1135), Expect = 1.900e-139 Identity = 287/751 (38.22%), Postives = 384/751 (51.13%), Query Frame = 3 Query: 168 LNLITSSRISELYSATATEDPLVLRRKAADFRKGYKNWRQKKPKGARGETNDLLDREKQHAHDVVEQEREMVQEAQEELDAAVGEYQPGLSRSQSFRMSGAEHHRGEHDGGRKNMRDRSGSQHREXXXXSLRRQASMQRTRSFHGEEELPHHDDQKENWLKFYVNPYSGMAEASTTEPVELTQAALKILPSSVLK------------PRFERTAHKPYVDKYICHLGVGGFHRSHQCVYTDDVLNLQAPG------VGGHSAGL------------------RWGFCGIGLMDWDRRMYETLKQQDYLYTVLSRGHKTNEARVIGSIVDFIFAPDDHQRCIDKLADPTTCIVSLTVTEKGYCQNTAGDLDMENPFVKADVEGNLQKPKTAIGMIVAALRQRRAKGTGPFTVLSCDNLPENGDKARHCVLQMADLIDP--ALKAWIVETTTFPNTMVDRITPVTDQEHKDILARDHLILDGWPVIAEDFSQWVVENSFCCGCPDWDKVGVLMVNDVKPYEFMKLRLLRRDPLSVFSLTLSCARSPSPSPYLQNGGHSALSYMACLCGYHYVDDAMNDAAIAGFIRRLFQEIVPTLSPVPGVDTQEYCEKLEYSEKLVERFPECRNPYIKDRLVRLTEDGSKKMQNTMRDAIVELTQRGLSTQVLALANAAWIRFCMGEDEEGQVLEIRDPIAVRLNHLARKALADPRSPNPR---EFLLEVHGPQLVACAGFVQEVAEHLKSLMASGAKSTL 2297 LNLI + L S E +R K +FRKGY+NWR KGARGE DL +R KQ D + R Q D A + + D+ XXXX PHH +E+WL+FY +P++ + L + + K P + R A VD +I H+GVGGFHRSHQ VY D++L QA GG +WG CG+GLM +D +M + L+ QDYLYTVL+R +N ARV+GS++D+++ PD +R I +++DP T IVSLTVTEKGYCQ T G LD +NP ++ D++ +L P +AIG I A L +RR PFTV++CDNLPENG AR VL A DP ALK W+ E FP++MVDRITP T EH+DILA+D L+LD WPV+AE+F QWV+E+ F CG P ++ VG + V DV YE MKLRLL NGGH L+Y+ L GY +VDDA+ D ++ F+R E+ PT+ V E Y EK+VERF N +IKD++ R+ EDGS K NTMR++++EL RGL +L A W+R+ EDE+G +E++DP + L+ LA+ AL+ P N R EFL G + V+ V EV +L G+K TL Sbjct: 36 LNLILPDEAAPL-SLPGYETIARIREKTNEFRKGYQNWRLHGAKGARGEAKDLFER-KQRKGDATAKTRVDFQRRASREDFADEQL----------------------------IDDKDAXXXXXXXXXXXXXXXXX------------PHHFANEEDWLRFYFSPHTPLLSLDEARKKSLLLPICQANLPRIKKLSEANRWHELKIPGYNRDAST--VDCWIMHIGVGGFHRSHQAVYLDELLTAQARARESLHATGGSXXXXXXXXXXXXESAESLAKDPKWGLCGVGLMPFDTKMRDALRNQDYLYTVLTRSSTSNAARVVGSMMDYVYVPDQPERAIQRVSDPRTKIVSLTVTEKGYCQATDGGLDFQNPLIQHDLK-DLSCPSSAIGFITAGLIRRRDANQVPFTVMACDNLPENGIVARRMVLDFAGRYDPSGALKEWVEENVCFPSSMVDRITPQTGPEHRDILAQDFLLLDEWPVVAEEFRQWVIEDKFSCGRPRFEHVGAMFVKDVHSYELMKLRLL-------------------------NGGHGVLAYLGYLLGYRFVDDAVADVLVSSFLRSYMDEVTPTVKNVR-------IEIERYKEKIVERFG---NRFIKDKIARIAEDGSTKFYNTMRESVMELCDRGLHIHHCSLGLAGWMRYMAAEDEQGDPIELKDPKSGALSKLAKDALSKPN--NARCITEFLRNAFGDEFVSIDRIVTEVTLSFYALKKIGSKETL 704
BLAST of jgi.p|Trimin1|349863 vs. uniprot
Match: A0A6H5LA23_9PHAE (M2DH protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LA23_9PHAE) HSP 1 Score: 410 bits (1055), Expect = 3.720e-131 Identity = 229/465 (49.25%), Postives = 291/465 (62.58%), Query Frame = 3 Query: 1080 IDKLADPTTCIVSLTVTEKGYCQNTAGDLDMENPFVKADVEGNLQKPKTAIGMIVAALRQRRAKGTGPFTVLSCDNLPENGDK---------ARHCVLQMADLIDPALKAWIVETTTFPNTMVDRITPVTDQEHKDILARDHLILDGWPVIAEDFSQWVVENSFCCGCPDWDKV-----------------------------------------GVLMVNDVKPYEFMKLRLLRRDPLSVFSLTLSCARSPSPSPYLQNGGHSALSYMACLCGYHYVDDAMNDAAIAGFIRRLFQEIVPTLSPVPGVDTQEYCEKLEYSEKLVERFPECRNPYIKDRLVRLTEDGSKKMQNTMRDAIVELTQRGLSTQVLALANAAWIRFCMGEDEE-GQVLE-IRDPIAVRLNHLARKALADPRS---PNPREFLLEVHGPQLVACAGFVQEVAEHLKSLMASGAKSTLSAVI 2309 + +L+D T IVSLTVTEKGYCQ+ GDLD N VK+D++G+L KP +AIGMIVAALRQR+ GT FTVLSCDNLPENGDK +H VLQMA + P L+ W+ TTFPNTMVDRITP+T+ EH +++ARD+++ D WPVIAEDFSQWV+E++FC G P WDKV G L+V DVKPYEFMKLRLL NGGHS LSY++ LCGY YVDDAM D I+GFI LFQEI PTL PVPGVDT+ Y KLVERF NPYIKD+L RL EDGSKKM NT+++A++EL ++GLST+V+A+ANAAWIR+ G+ G V++ I+DP+A L LA +A+ + P P +++ V G ++V GF++E+ + LKS++ GA TL V+ Sbjct: 32 LSQLSDVETRIVSLTVTEKGYCQDVNGDLDRTNALVKSDLDGDLAKPSSAIGMIVAALRQRKNNGTPSFTVLSCDNLPENGDKNLLRASLALIKHVVLQMAGYVSPELREWVEANTTFPNTMVDRITPMTEAEHIELVARDYMVNDAWPVIAEDFSQWVIEDNFCNGMPAWDKVWNVVHLLCVAFSPAYPTASPSKLTVDWLRSDRSIDRSIDQVGGLVVKDVKPYEFMKLRLL-------------------------NGGHSCLSYISVLCGYSYVDDAMADPQISGFISALFQEIAPTLLPVPGVDTK------TYQAKLVERFG---NPYIKDKLTRLAEDGSKKMPNTLKEAVIELREKGLSTKVIAMANAAWIRYMTGKGPIWGDVIQGIKDPLAAELQDLAEEAINGVDTGAEPKPEKYIELVFGQEIVELEGFMEEIKDCLKSIVNKGAPVTLEEVM 462
BLAST of jgi.p|Trimin1|349863 vs. uniprot
Match: A0A7S2CF24_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CF24_9STRA) HSP 1 Score: 409 bits (1051), Expect = 2.260e-127 Identity = 263/691 (38.06%), Postives = 358/691 (51.81%), Query Frame = 3 Query: 207 SATATEDPLVLRRKAADFRKGYKNWRQKKPKGARGETNDLLDREKQHAHDVVEQEREMVQEAQEELDAAVGE--YQPGLSRSQSFRMSGAEHHRGEHDGGRKNMRDRSGSQHREXXXXSLRRQASMQRTRSFHGEEELPHHDDQKENWLKFYVNPYSGMAEA--STTEPVELTQAALKILPSS----VLKPRFERTAHKPYVDKYICHLGVGGFHRSHQCVYTDDVLNLQAPGVGGHSA-GLRWGFCGIGLMDWDRRMYETLKQQDYLYTVLSRGHKTNEARVIGSIVDFIFAPDDHQRCIDKLADPTTCIVSLTVTEKGYCQNTAGDLDMENPFVKADVEGNLQKPKTAIGMIVAALRQRRAKGTGPFTVLSCDNLPENGDKARHCVL-QMADLIDPALKAWIVETTTFPNTMVDRITPVTDQEHKDILARDHLILDGWPVIAEDFSQWVVENSFCCGC-PDWDKVGVLMVNDVKPYEFMKLRLLRRDPLSVFSLTLSCARSPSPSPYLQNGGHSALSYMACLCGYHYVDDAMNDAAIAGFIRRLFQEIVPTLSPVPGVDTQEYCEKLEYSEKLVERFPECRNPYIKDRLVRLTEDGSKKMQNTMRDAIVELTQRGLSTQVLALANAAWIRFCMGEDEEGQVLEIRDPIAVRLNHLARKAL---------ADPRSPNPREFLLEVHGPQL 2219 S A +D +L +AA+FR GY NWR+ KG +GE D+ + ++ A VGE Y SGA + SG S+ R S+ + E + ENW+KF+++P S + E + + L I+ V P + R + + ICH+GVGGFHRSH+ +Y D +LN+ A RW GIGLM WD +M ETL+ Q+ LYT+++R K N +IGSIVD+++APDD + +++L++P T IVSLTVTEKGYC G LD++N + D+ + P+TA+GMI ALR RR +G PFTVLSCDNLP NGD +R V+ + L DP L AW+ TFPNTMVDRITP+T EH D++ + + D WPVIAED++QWV+E++F GC P + G LMV DV YE MKLRLL N GHSALSY++ L G+ +VD AM D + FI+ F+E TL+PVPGVD +Y + L RF NPYIKD L RL EDGS+K+ TMRD +E + G + AAWIR+ +G D + + I+DP L+ +A+ P S P+EF+ V G L Sbjct: 42 SKVAMDDAYLLMNRAAEFRSGYGNWRKGASKGVKGEVLDI--------------------KVEKGEGATVGEQGYXXXXXXXXXXXXSGA-------------VTKSSG-----VTKHSVTRNMSV----TMLSAESAASAANNGENWIKFFLHPDSSFNKILDGAAEVLPICSKNLPIIAHRNKGVVTVPGYARKVNS--FNGIICHMGVGGFHRSHEAMYLDKLLNMDAISEDKDDPIKKRWAIIGIGLMPWDLKMKETLEAQNCLYTLMTRSPKNNATAIIGSIVDYMYAPDDRNKVLERLSNPQTKIVSLTVTEKGYCLTNGGVLDLDNTMIATDLTSP-RAPQTAVGMIAEALRIRRLRGVSPFTVLSCDNLPGNGDLSRKMVIGYLQALGDPQLLAWVETYGTFPNTMVDRITPITKDEHIDLIRATYNMRDNWPVIAEDYTQWVIEDNFVNGCRPALEAGGALMVGDVHAYEMMKLRLL-------------------------NAGHSALSYISYLAGHRFVDAAMTDPMVHNFIKMYFEEHTETLAPVPGVDVT------DYKKSLAMRFS---NPYIKDTLQRLAEDGSQKLVTTMRDPAIENIEAGREIGLFCFVVAAWIRYLVGFDTDNNPIAIKDPRGEELSAMAKAICHVEDGKPGRGSPES--PKEFMTTVFGADL 651 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|349863 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 1
BLAST of jgi.p|Trimin1|349863 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_8935 ID=mRNA_8935|Name=jgi.p|Trimin1|349863|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1185bp|location=Sequence derived from alignment at Contig_50:625358..635150+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGGGTCAGGGGGACTTTGACATCATTCCTTCTGACTTGCAGTGCGTGCCback to top protein sequence of jgi.p|Trimin1|349863 >Trimin1|349863|estExt_Genemark1.C_Ctg_500073 ID=Trimin1|349863|estExt_Genemark1.C_Ctg_500073|Name=jgi.p|Trimin1|349863|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=382bp MGQGDFDIIPSDLQCVPGYITFQEPAEHYYGRPGSDEHELIAASLARAADback to top mRNA from alignment at Contig_50:625358..635150+ Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_8935 ID=mRNA_8935|Name=jgi.p|Trimin1|349863|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=9793bp|location=Sequence derived from alignment at Contig_50:625358..635150+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_50:625358..635150+ >mRNA_8935 ID=mRNA_8935|Name=jgi.p|Trimin1|349863|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1146bp|location=Sequence derived from alignment at Contig_50:625358..635150+ (Tribonema minus UTEX_B_3156 )back to top |