mRNA_8899 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|349838 vs. uniprot
Match: A0A836CBI5_9STRA (Putative kinesin family protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBI5_9STRA) HSP 1 Score: 828 bits (2138), Expect = 1.970e-298 Identity = 523/523 (100.00%), Postives = 523/523 (100.00%), Query Frame = 1 Query: 1 MVVPAAAARPSRLPTPQAEEQLTALAAAKEGLEQLLTEEKAVALLQQTRLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKIAELEGTEIAHEEERRRLHNTIQELKGNIRVFARVRPLLEASTDTTAEAEDADYAATGGLTLAIPSNDPEHRRLTLLGPARDTVVGDRGEAKSWDFQFDRVFGPHASQEDVFRDISQLVQSVLDGYKVCLFAYGQTGSGKTWTMGTGSPEAEEHRGMIPRAVAQIFATMEAMKEGGWKFDGAHVYNETLRDLLASESSSGDCTARTLDIKHGREGNTTVAGLSKHEIASAEDVNGLLRRAARARATGATHSNAHSSRSHSVFQLHVPCDSARGESRRGCLTMVDLAGSERLDKSGAEGGRLKETQAINKSLSALGDVIFALANGERHVPYRNSKLTYLLQHSLGGDSKVLMLVNVSPEPQHQAETLCSLRFAHKVNSCEIGSARTHKRHA 1569 MVVPAAAARPSRLPTPQAEEQLTALAAAKEGLEQLLTEEKAVALLQQTRLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKIAELEGTEIAHEEERRRLHNTIQELKGNIRVFARVRPLLEASTDTTAEAEDADYAATGGLTLAIPSNDPEHRRLTLLGPARDTVVGDRGEAKSWDFQFDRVFGPHASQEDVFRDISQLVQSVLDGYKVCLFAYGQTGSGKTWTMGTGSPEAEEHRGMIPRAVAQIFATMEAMKEGGWKFDGAHVYNETLRDLLASESSSGDCTARTLDIKHGREGNTTVAGLSKHEIASAEDVNGLLRRAARARATGATHSNAHSSRSHSVFQLHVPCDSARGESRRGCLTMVDLAGSERLDKSGAEGGRLKETQAINKSLSALGDVIFALANGERHVPYRNSKLTYLLQHSLGGDSKVLMLVNVSPEPQHQAETLCSLRFAHKVNSCEIGSARTHKRHA Sbjct: 1 MVVPAAAARPSRLPTPQAEEQLTALAAAKEGLEQLLTEEKAVALLQQTRLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKIAELEGTEIAHEEERRRLHNTIQELKGNIRVFARVRPLLEASTDTTAEAEDADYAATGGLTLAIPSNDPEHRRLTLLGPARDTVVGDRGEAKSWDFQFDRVFGPHASQEDVFRDISQLVQSVLDGYKVCLFAYGQTGSGKTWTMGTGSPEAEEHRGMIPRAVAQIFATMEAMKEGGWKFDGAHVYNETLRDLLASESSSGDCTARTLDIKHGREGNTTVAGLSKHEIASAEDVNGLLRRAARARATGATHSNAHSSRSHSVFQLHVPCDSARGESRRGCLTMVDLAGSERLDKSGAEGGRLKETQAINKSLSALGDVIFALANGERHVPYRNSKLTYLLQHSLGGDSKVLMLVNVSPEPQHQAETLCSLRFAHKVNSCEIGSARTHKRHA 523
BLAST of jgi.p|Trimin1|349838 vs. uniprot
Match: A0A7J9HPY3_9ROSI (Kinesin-like protein (Fragment) n=1 Tax=Gossypium harknessii TaxID=34285 RepID=A0A7J9HPY3_9ROSI) HSP 1 Score: 352 bits (902), Expect = 1.610e-111 Identity = 207/398 (52.01%), Postives = 264/398 (66.33%), Query Frame = 1 Query: 397 KIAELEGTEIAHEEERRRLHNTIQELKGNIRVFARVRPLLEASTDTTAEAEDADYAATGGLTLAIPSNDPEHRRLTLLGPARDTVVGDRGEAKSWDFQFDRVFGPHASQEDVFRDISQLVQSVLDGYKVCLFAYGQTGSGKTWTMGTGSPEAEEHRGMIPRAVAQIFATMEAMKEGGWKF----DGAHVYNETLRDLLASESSSGDCTARTLD--------IKHGREGNTTVAGLSKHEIASAEDVNGLLRRAARARATGATHSNAHSSRSHSVFQLHVPCDSARGESR-RGCLTMVDLAGSERLDKSGAEGGRLKETQAINKSLSALGDVIFALANGERHVPYRNSKLTYLLQHSLGGDSKVLMLVNVSPEPQHQAETLCSLRFAHKVNSCEIGSAR 1551 ++A++E I E R++LHNTI ELKGNIRVF RVRPLL D A AEDA ++ P++ LG D + + + F FD+VF ASQ+DVF +ISQLVQS LDGYKVC+FAYGQTGSGKT+TM G PEA E +G+IPR++ QIF + +A++E GWK+ +YNET+RDLL++ SSG + R + IKH GNT V+ L+ +++S +++ LLR+AA++R+ G T N SSRSH VF L + + E + +G L ++DLAGSERL +SGA G RLKETQAINKSLS L DVIFALA E HVP+RNSKLTYLLQ LGGDSK LM VNVSP+P E+LCSLRFA +VN+CEIG R Sbjct: 121 RLADMEHRLIDGENLRKKLHNTILELKGNIRVFCRVRPLLP---DDGAAAEDA--------IVSYPTSTES------LGRGVDLIQS----GQKYPFTFDKVFNHEASQQDVFVEISQLVQSALDGYKVCIFAYGQTGSGKTYTM-MGRPEASEQKGLIPRSLEQIFQSSQALREQGWKYKMQASMLEIYNETIRDLLSNNRSSGSDSTRPENSVSGKQYTIKHDANGNTYVSDLTIVDVSSISEISSLLRQAAQSRSVGRTQMNEQSSRSHMVFTLRISGINESTEQQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSCLSDVIFALARKEDHVPFRNSKLTYLLQPCLGGDSKTLMFVNVSPDPSSVGESLCSLRFAARVNACEIGVPR 496
BLAST of jgi.p|Trimin1|349838 vs. uniprot
Match: A0A1R3I267_COCAP (Kinesin-like protein n=2 Tax=Corchorus TaxID=93758 RepID=A0A1R3I267_COCAP) HSP 1 Score: 357 bits (916), Expect = 2.700e-110 Identity = 204/392 (52.04%), Postives = 263/392 (67.09%), Query Frame = 1 Query: 397 KIAELEGTEIAHEEERRRLHNTIQELKGNIRVFARVRPLLEASTDTTAEAEDADYAATGGLTLAIPSNDPEHRRLTLLGPARDTVVGDRGEAKSWDFQFDRVFGPHASQEDVFRDISQLVQSVLDGYKVCLFAYGQTGSGKTWTMGTGSPEAEEHRGMIPRAVAQIFATMEAMKEGGWKF----DGAHVYNETLRDLLASE---SSSGDCTARTLDIKHGREGNTTVAGLSKHEIASAEDVNGLLRRAARARATGATHSNAHSSRSHSVFQLHVP-CDSARGESRRGCLTMVDLAGSERLDKSGAEGGRLKETQAINKSLSALGDVIFALANGERHVPYRNSKLTYLLQHSLGGDSKVLMLVNVSPEPQHQAETLCSLRFAHKVNSCEIGSA 1548 ++AE+E I E+ R+RLHNTI ELKGNIRVF RVRPLL D AAT ++ P++ + LG D + + F FD+VF ASQ+D+F +ISQLVQS LDGYKVC+FAYGQTGSGKT+TM G PEA+E +G+IPR++ QIF + ++++ GWK+ +YNET+RDLL+ +S + + IKH GNT V+ L+ +++S +++ LLR+AA++R+ G TH N SSRSH VF L + + A + +G L ++DLAGSERL +SGA G RLKETQAINKSLS+L DVIFALA E HVPYRNSKLTYLLQ LGGDSK LM VNVSP+P E+LCSLRFA +VNSCEIG+A Sbjct: 411 RLAEMEQKLIEGEDLRKRLHNTILELKGNIRVFCRVRPLLPD-----------DGAATEAPVISYPTS------VESLGRGIDLIQS----GNKYPFTFDKVFDHEASQQDIFVEISQLVQSALDGYKVCIFAYGQTGSGKTYTM-MGRPEAQEEKGLIPRSLEQIFQSSQSLQAQGWKYKMQASMLEIYNETIRDLLSINRPIASESAVSGKQYTIKHDANGNTHVSDLTVVDVSSIAEISSLLRQAAQSRSVGRTHMNEQSSRSHMVFTLRISGVNEATEQQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALAKKEEHVPYRNSKLTYLLQPCLGGDSKTLMFVNVSPDPTSVGESLCSLRFAARVNSCEIGTA 780
BLAST of jgi.p|Trimin1|349838 vs. uniprot
Match: A0A4P9WYM2_9FUNG (Kinesin-like protein (Fragment) n=1 Tax=Caulochytrium protostelioides TaxID=1555241 RepID=A0A4P9WYM2_9FUNG) HSP 1 Score: 342 bits (876), Expect = 2.750e-109 Identity = 213/394 (54.06%), Postives = 253/394 (64.21%), Query Frame = 1 Query: 400 IAELEGTEIAHEEERRRLHNTIQELKGNIRVFARVRPLLEASTDTTAEAEDADYAATGGLTLAIPSNDPEHRRLTLLGPARDTVVGDRGEAK--SWDFQFDRVFGPHASQEDVFRDISQLVQSVLDGYKVCLFAYGQTGSGKTWTMGTGSPEAEE--HRGMIPRAVAQIFATMEAMKEGGWKFDGA----HVYNETLRDLLASESSSGDCTARTLDIKH-GREGNTTVAGLSKHEIASAEDVNGLLRRAARARATGATHSNAHSSRSHSVFQLHVPC-DSARGESRRGCLTMVDLAGSERLDKSGAEGGRLKETQAINKSLSALGDVIFALANGERHVPYRNSKLTYLLQHSLGGDSKVLMLVNVSPEPQHQAETLCSLRFAHKVNSCEIGSAR 1551 +A+LE HE RRR+HNTI ELKGNIRVF RVRP L + A+D A + LTL+ D+V GDR AK + FQFDRVF P + Q +VF +ISQLVQS LDGY VC+FAYGQTGSGKT+TM G +A + HRGMIPRAVAQIF +K GW + +YNE LRDLLA +S + LDIKH TTV + ++AS V LL RA RA AT+ N SSRSHSVF L + + GE G L ++DLAGSERL SG+ G RLKETQAINKSLS+LGDVI ALAN + H+PYRNSKLTYLLQ+SLGG+SK LM VN+SP P + ETLCSLRFA KVN+C+IG+AR Sbjct: 13 VADLEAKLRDHEMIRRRMHNTILELKGNIRVFCRVRPPLPR--EQALAAQDGHAAPLSHI-----------HSLTLVQTV-DSVQGDRASAKRREFPFQFDRVFRPESEQSEVFDEISQLVQSALDGYNVCIFAYGQTGSGKTFTM-EGPEDANDLRHRGMIPRAVAQIFEHANELKSKGWTYTFEITFLEIYNEQLRDLLAVHASE----PKRLDIKHLPGTTKTTVTEATVVQVASPAAVTVLLNRARANRAVAATNMNERSSRSHSVFTLRLAGKNQITGEDGEGVLNLIDLAGSERLSASGSTGDRLKETQAINKSLSSLGDVIMALANKDPHIPYRNSKLTYLLQNSLGGNSKTLMFVNISPLPVNLQETLCSLRFATKVNNCQIGTAR 387
BLAST of jgi.p|Trimin1|349838 vs. uniprot
Match: E1ZMP5_CHLVA (Kinesin motor domain-containing protein (Fragment) n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZMP5_CHLVA) HSP 1 Score: 340 bits (873), Expect = 5.600e-109 Identity = 211/392 (53.83%), Postives = 256/392 (65.31%), Query Frame = 1 Query: 397 KIAELEGTEIAHEEERRRLHNTIQELKGNIRVFARVRPLLEASTDTTAEAEDADYAATGGLTLAIPS-NDPEHRRLTLLGPARDTVVGDRGEAKSWDFQFDRVFGPHASQEDVFRDISQLVQSVLDGYKVCLFAYGQTGSGKTWTMGTGSPEAEEHRGMIPRAVAQIFATMEAMKEGGWKFDGA----HVYNETLRDLLASESSSGDCTARTLDIKHGREGNTTVAGLSKHEIASAEDVNGLLRRAARARATGATHSNAHSSRSHSVFQLHVPCDSAR-GESRRGCLTMVDLAGSERLDKSGAEGGRLKETQAINKSLSALGDVIFALANGERHVPYRNSKLTYLLQHSLGG-DSKVLMLVNVSPEPQHQAETLCSLRFAHKVNSCEIGSAR 1551 ++AE E + E RRRLHNTIQELKGNIRVF RVRP AE E A+ AA G +A P+ D R L L P G+R +A++ F FD+VF P ASQ +VF +ISQLVQS LDGYKVC+FAYGQTGSGKT TM GS ++ GMIPRA+ Q+FA + + GW+++ +YNE LRDLL +G A + H +G TTV+ L +++ E V LL RA R R+ GAT N SSRSH VFQL + +A G+ +G L ++DLAGSERL +S G RLKETQAINKSL+ALGDVI AL N E HVPYRNSKLTYLLQ SLGG +SK LM VNVSP + ETLCSLRFA KVN+CEIG+A+ Sbjct: 6 QLAEAERKVVEGEAVRRRLHNTIQELKGNIRVFCRVRP--------AAEGEGAE-AAPGRPVVAYPAAGDLVGRGLELCQPGGGAGKGER-DAQAHSFGFDKVFAPGASQGEVFEEISQLVQSALDGYKVCIFAYGQTGSGKTHTM-MGS---QQEPGMIPRAMNQVFAAAKELAAQGWRYEMRAAMLEIYNEELRDLLGKGPPAGKKHA----VSHDDKGGTTVSHLDYVDVSQPERVAALLERAMRQRSVGATAMNDQSSRSHMVFQLQIEGANAETGQKAKGLLNLIDLAGSERLSRSAVTGERLKETQAINKSLAALGDVIAALGNKEAHVPYRNSKLTYLLQTSLGGANSKTLMFVNVSPSAESAQETLCSLRFAAKVNACEIGTAK 379
BLAST of jgi.p|Trimin1|349838 vs. uniprot
Match: A0A137P3Y5_CONC2 (Kinesin-like protein (Fragment) n=1 Tax=Conidiobolus coronatus (strain ATCC 28846 / CBS 209.66 / NRRL 28638) TaxID=796925 RepID=A0A137P3Y5_CONC2) HSP 1 Score: 342 bits (876), Expect = 9.920e-109 Identity = 193/375 (51.47%), Postives = 248/375 (66.13%), Query Frame = 1 Query: 442 RRRLHNTIQELKGNIRVFARVRPLLEASTDTTAEAEDADYAATGGLTLAIPSNDPEHRRLTLLGPARDTVVGDRGEAKSWDFQFDRVFGPHASQEDVFRDISQLVQSVLDGYKVCLFAYGQTGSGKTWTMGTGSPEAEEHRGMIPRAVAQIFATMEAMKEGGWKF--DGAHV--YNETLRDLLASESSSGDCTARTLDIKHGREGNTTVAGLSKHEIASAEDVNGLLRRAARARATGATHSNAHSSRSHSVFQLHVPC-DSARGESRRGCLTMVDLAGSERLDKSGAEGGRLKETQAINKSLSALGDVIFALANGERHVPYRNSKLTYLLQHSLGGDSKVLMLVNVSPEPQHQAETLCSLRFAHKVNSCEIGSAR 1551 RR+LHNTIQELKGNIRVF RVRP L++ + E + P D + +++ + + + +G K F FDRVFGP Q VF +I+QL+QS LDGY VC+FAYGQTGSGKT+TM + GMIPRAV QIF T A+KE GW + +G +V YNE + DLL + + + + DI+H G TTV+ ++ + S E V+ LL +A + RA AT+SN SSRSHSVF L + +S GES G L ++DLAGSERL +SG+ G RLKETQAINKSLS+LGDVI ALA+ H+PYRNSKLTYLLQ+SLGG+SK LM VN+SP +H ET+CSLRFA KVN+C+IG+A+ Sbjct: 65 RRKLHNTIQELKGNIRVFCRVRPPLDSEIKSNVENPPLSH-------FKFPDLDLDSKQIEI-NQSYENALGKTISGKPLPFAFDRVFGPSTDQAQVFEEINQLIQSALDGYPVCIFAYGQTGSGKTFTMEGPNNHDPNLMGMIPRAVNQIFDTATALKEKGWNYSMEGQYVEIYNENIHDLLTNSNDN-----QKYDIRHDSNGKTTVSNITVANVESPESVHKLLDKARKNRAVAATNSNERSSRSHSVFTLRLSGKNSITGESSEGVLNLIDLAGSERLAQSGSTGDRLKETQAINKSLSSLGDVIGALASQASHIPYRNSKLTYLLQNSLGGNSKTLMFVNISPLTEHCGETICSLRFATKVNNCQIGTAK 426
BLAST of jgi.p|Trimin1|349838 vs. uniprot
Match: A0A2I0WMP0_9ASPA (Kinesin-1 n=3 Tax=Dendrobium catenatum TaxID=906689 RepID=A0A2I0WMP0_9ASPA) HSP 1 Score: 353 bits (906), Expect = 2.180e-108 Identity = 207/402 (51.49%), Postives = 263/402 (65.42%), Query Frame = 1 Query: 400 IAELEGTEIAHEEERRRLHNTIQELKGNIRVFARVRPLLEASTDTTAEAEDADYAATGGLTLAIPSNDPEHRRLTLLGPARDTVVGDRGEAKSWDFQFDRVFGPHASQEDVFRDISQLVQSVLDGYKVCLFAYGQTGSGKTWTMGTGSPEAEEHRGMIPRAVAQIFATMEAMKEGGWKF----DGAHVYNETLRDLLA-SESSSGDCTA--RTLDIKHGREGNTTVAGLSKHEIASAEDVNGLLRRAARARATGATHSNAHSSRSHSVFQLHVP-CDSARGESRRGCLTMVDLAGSERLDKSGAEGGRLKETQAINKSLSALGDVIFALANGERHVPYRNSKLTYLLQHSLGGDSKVLMLVNVSPEPQHQAETLCSLRFAHKVNSCEIGSARTHKRHA*SDS 1581 + +LE + E+ R++LHNTI ELKGNIRVF RVRP+L D DY G+ ++ P++ + LG D + A++ F FD+VFG ASQEDVF +ISQLVQS LDGYKVC+FAYGQTGSGKT+TM G PEA E +G+IPR++ QIF T +A+K GWK+ +YNET+RDLL+ + S D T + IKH GNT V+ L+ ++ S +V+ LL +AA++R+ G T N SSRSH VF L + + A + +G L ++DLAGSERL KSG+ G RLKETQAINKSLS L DVIFA+A E HVPYRNSKLTYLLQ LGGDSK LM VN+SPE E++CSLRFA +VN+CEIG R H + DS Sbjct: 452 VIDLEYQLVEAEKLRKKLHNTILELKGNIRVFCRVRPVLP----------DIDYRGDDGIVVSYPTS------VECLGRGIDLMHN----AQNHSFTFDKVFGHEASQEDVFFEISQLVQSALDGYKVCIFAYGQTGSGKTYTM-MGKPEAHEQKGLIPRSLEQIFETSQALKYQGWKYKMQASMLEIYNETIRDLLSPNRCGSTDATHANKQYSIKHDSTGNTLVSDLTVVDVCSINEVSFLLNQAAQSRSVGKTQMNEQSSRSHFVFTLRISGMNDATEQQVQGILNLIDLAGSERLAKSGSTGDRLKETQAINKSLSCLSDVIFAIAKKEDHVPYRNSKLTYLLQPCLGGDSKTLMFVNISPEASSANESICSLRFAARVNACEIGVPRRHTQMRPLDS 832
BLAST of jgi.p|Trimin1|349838 vs. uniprot
Match: A0A8J4V2I7_9ROSI (Kinesin-like protein n=2 Tax=Castanea mollissima TaxID=60419 RepID=A0A8J4V2I7_9ROSI) HSP 1 Score: 343 bits (879), Expect = 4.270e-108 Identity = 202/398 (50.75%), Postives = 258/398 (64.82%), Query Frame = 1 Query: 397 KIAELEGTEIAHEEERRRLHNTIQELKGNIRVFARVRPLLEASTDTTAEAEDADYAATGGLTLAIPSNDPEHRRLTLLGPARDTVVGDRGEAKSWDFQFDRVFGPHASQEDVFRDISQLVQSVLDGYKVCLFAYGQTGSGKTWTMGTGSPEAEEHRGMIPRAVAQIFATMEAMKEGGWKF----DGAHVYNETLRDLLASESSSGDCTARTLD--------IKHGREGNTTVAGLSKHEIASAEDVNGLLRRAARARATGATHSNAHSSRSHSVFQLHVPCDSARGESR-RGCLTMVDLAGSERLDKSGAEGGRLKETQAINKSLSALGDVIFALANGERHVPYRNSKLTYLLQHSLGGDSKVLMLVNVSPEPQHQAETLCSLRFAHKVNSCEIGSAR 1551 ++A+ E I E+ R++LHNTI ELKGNIRVF RVRPLL D T +A P++ LG D V + + + F FD+VF ASQ+DVF +ISQLVQS LDGYKVC+FAYGQTGSGKT+TM G PE +G+IPR++ QIF T ++++ GWK+ +YNET+RDLL++ SSG +RT + IKH GNT V+ L+ ++ S +++ LL++AA +R+ G T N SSRSH VF L + + E + +G L ++DLAGSERL KSG+ G RLKETQAINKSLS+L DVIFALA E HVP+RNSKLTYLLQ LGGDSK LM VN+SP+P E+LCSLRFA +VNSCEIG R Sbjct: 121 RLADAEFQLIEGEKLRKKLHNTILELKGNIRVFCRVRPLLPE-----------DGVGTEATVIAYPTS------TETLGRGIDLV---QSAGQRYPFTFDKVFSHEASQQDVFVEISQLVQSALDGYKVCIFAYGQTGSGKTYTM-MGRPETSVQKGLIPRSLEQIFQTSQSLQAQGWKYKMQASMLEIYNETIRDLLSTNRSSGLDMSRTENGAPGKQYTIKHDVNGNTHVSDLTIVDVCSINEISSLLQQAAHSRSVGRTQMNEQSSRSHFVFTLRISGVNESTEQQVQGVLNLIDLAGSERLSKSGSTGDRLKETQAINKSLSSLADVIFALAKKEDHVPFRNSKLTYLLQPCLGGDSKTLMFVNISPDPSSVGESLCSLRFAARVNSCEIGIPR 497
BLAST of jgi.p|Trimin1|349838 vs. uniprot
Match: A0A453C4F4_AEGTS (Kinesin-like protein n=2 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453C4F4_AEGTS) HSP 1 Score: 339 bits (870), Expect = 6.920e-108 Identity = 197/391 (50.38%), Postives = 251/391 (64.19%), Query Frame = 1 Query: 397 KIAELEGTEIAHEEERRRLHNTIQELKGNIRVFARVRPLLEASTDTTAEAEDADYAATGGLTLAIPSNDPEHRRLTLLGPARDTVVGDRGEAKSWDFQFDRVFGPHASQEDVFRDISQLVQSVLDGYKVCLFAYGQTGSGKTWTMGTGSPEAEEHRGMIPRAVAQIFATMEAMKEGGWKF----DGAHVYNETLRDLLA-SESSSGDCTARTLDIKHGREGNTTVAGLSKHEIASAEDVNGLLRRAARARATGATHSNAHSSRSHSVFQLHV-PCDSARGESRRGCLTMVDLAGSERLDKSGAEGGRLKETQAINKSLSALGDVIFALANGERHVPYRNSKLTYLLQHSLGGDSKVLMLVNVSPEPQHQAETLCSLRFAHKVNSCEIGSAR 1551 ++ E E + E+ R++LHNTI ELKGNIRVF RVRPLL + ++ P+N R L +S+ F FD+VF ASQEDVF +ISQLVQS LDGYKVC+FAYGQTGSGKT TM G+PE + +G+IPR++ QIF T + + GWK+ +YNET+RDLLA S +S D A +IKH GNT V+ L+ ++ S +V+ LL+RAA++R+ G T N SSRSH VF L + + + +G L ++DLAGSERL+KSGA G RLKETQAINKSLS L DVIF++A E H+P+RNSKLTYLLQ LGGDSK LM VN+SPE +E++CSLRFA +VNSCEIG R Sbjct: 53 RLTEAEQKIVDGEKLRKKLHNTILELKGNIRVFCRVRPLLSNESGA----------------VSYPNNGENIGRGVEL----------MHNTQSYSFAFDKVFDHSASQEDVFTEISQLVQSALDGYKVCIFAYGQTGSGKTHTM-MGNPEFNDQKGLIPRSLEQIFQTSQCLMSQGWKYKMQASMLEIYNETIRDLLATSRTSIQDGAASKYNIKHDANGNTQVSDLTIVDVRSINEVSSLLKRAAQSRSVGKTQMNEESSRSHCVFTLRIFGVNEGTDQQVQGVLNLIDLAGSERLNKSGATGDRLKETQAINKSLSCLSDVIFSIAKKEEHIPFRNSKLTYLLQPCLGGDSKTLMFVNLSPEVSSTSESICSLRFAARVNSCEIGVPR 416
BLAST of jgi.p|Trimin1|349838 vs. uniprot
Match: A0A0V0IUK2_SOLCH (Putative kinesin-1-like n=1 Tax=Solanum chacoense TaxID=4108 RepID=A0A0V0IUK2_SOLCH) HSP 1 Score: 344 bits (882), Expect = 7.400e-108 Identity = 200/401 (49.88%), Postives = 260/401 (64.84%), Query Frame = 1 Query: 397 KIAELEGTEIAHEEERRRLHNTIQELKGNIRVFARVRPLLEASTDTTAEAEDADYAATGGLTLAIPSNDPEHRRLTLLGPARDTVVGDRGEAKSWDFQFDRVFGPHASQEDVFRDISQLVQSVLDGYKVCLFAYGQTGSGKTWTMGTGSPEAEEHRGMIPRAVAQIFATMEAMKEGGWKFDGA----HVYNETLRDLLAS-ESSSGDCTARTLDIKHGREGNTTVAGLSKHEIASAEDVNGLLRRAARARATGATHSNAHSSRSHSVFQLHVPCDSARGESR-RGCLTMVDLAGSERLDKSGAEGGRLKETQAINKSLSALGDVIFALANGERHVPYRNSKLTYLLQHSLGGDSKVLMLVNVSPEPQHQAETLCSLRFAHKVNSCEIGSARTHKRHA*SDS 1581 ++ + E + E+ R++LHNTI ELKGNIRVF RVRPLL D ++ PS+ + R + G+ S F FD+VF P ASQEDVF +ISQLVQS LDGYKVC+FAYGQTGSGKT TM G+PE+ E++G+IPR + Q+F T ++++ GWK++ +YNET+RDLL+ + S + + IKH G+T V+ L+ ++ S+ V+ LLRRAA++R+ G T N +SSRSH VF L + + E + +G L ++DLAGSERL KSG+ G RLKETQAINKSLS+L DVIFALA E HVP+RNSKLTYLLQ LGGDSK LM VNV+P+P E+LCSLRFA +VN+CEIG R SDS Sbjct: 183 RLVDAETKVVEGEKLRKKLHNTILELKGNIRVFCRVRPLLSE-----------DGVGAEANVVSFPSS--------MEAQGRGIDLAQNGQKHS--FTFDKVFTPEASQEDVFVEISQLVQSALDGYKVCIFAYGQTGSGKTHTM-MGNPESAENKGLIPRTLEQVFETRQSLQAQGWKYEMQVSMLEIYNETIRDLLSGFDXSRPENGGKQYTIKHDANGHTHVSDLTVVDVQSSSKVSSLLRRAAQSRSVGKTQMNENSSRSHFVFTLRISGVNESTEQQVQGILNLIDLAGSERLSKSGSTGDRLKETQAINKSLSSLSDVIFALAKKEEHVPFRNSKLTYLLQPCLGGDSKTLMFVNVAPDPSSTGESLCSLRFAARVNACEIGIPRRQTSMRSSDS 561 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|349838 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_8899 ID=mRNA_8899|Name=jgi.p|Trimin1|349838|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1748bp|location=Sequence derived from alignment at Contig_50:296427..301685- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGGTAGTTCCCGCTGCTGCTGCGAGGCCTAGCCGGCTGCCCACGCCGCAback to top protein sequence of jgi.p|Trimin1|349838 >Trimin1|349838|estExt_Genemark1.C_Ctg_500040 ID=Trimin1|349838|estExt_Genemark1.C_Ctg_500040|Name=jgi.p|Trimin1|349838|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=524bp MVVPAAAARPSRLPTPQAEEQLTALAAAKEGLEQLLTEEKAVALLQQTRLback to top mRNA from alignment at Contig_50:296427..301685- Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_8899 ID=mRNA_8899|Name=jgi.p|Trimin1|349838|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=5259bp|location=Sequence derived from alignment at Contig_50:296427..301685- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_50:296427..301685- >mRNA_8899 ID=mRNA_8899|Name=jgi.p|Trimin1|349838|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1572bp|location=Sequence derived from alignment at Contig_50:296427..301685- (Tribonema minus UTEX_B_3156 )back to top |