mRNA_884 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|129157
Unique Name	mRNA_884
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|129157 vs. uniprot
Match: A0A835Z3E7_9STRA (KAP NTPase domain-containing protein (Fragment) n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3E7_9STRA)

HSP 1 Score: 117 bits (294), Expect = 1.350e-33
Identity = 61/61 (100.00%), Postives = 61/61 (100.00%), Query Frame = 1

Query:    1 YGMVVTIDDLDRCSKDKIVNMLETVHLLLQIPKAPIVAFLAIDPRVIIAAVEDKLGERVTQ 183
            YGMVVTIDDLDRCSKDKIVNMLETVHLLLQIPKAPIVAFLAIDPRVIIAAVEDKLGERVTQ
Sbjct:    1 YGMVVTIDDLDRCSKDKIVNMLETVHLLLQIPKAPIVAFLAIDPRVIIAAVEDKLGERVTQ 61

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BLAST of jgi.p|Trimin1|129157 vs. uniprot
Match: A0A835YXA7_9STRA (KAP NTPase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXA7_9STRA)

HSP 1 Score: 97.8 bits (242), Expect = 1.220e-23
Identity = 47/58 (81.03%), Postives = 54/58 (93.10%), Query Frame = 1

Query:    7 MVVTIDDLDRCSKDKIVNMLETVHLLLQIPKAPIVAFLAIDPRVIIAAVEDKLGERVT 180
            MV+TIDDLDRCSK KIVNMLE VHLLLQIP API+AFLAIDPR++IAA+ED LG+R+T
Sbjct:    1 MVITIDDLDRCSKPKIVNMLEAVHLLLQIPSAPIIAFLAIDPRIVIAAIEDTLGDRIT 58

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BLAST of jgi.p|Trimin1|129157 vs. uniprot
Match: A0A6P5A1I9_BRABE (kinase D-interacting substrate of 220 kDa-like n=1 Tax=Branchiostoma belcheri TaxID=7741 RepID=A0A6P5A1I9_BRABE)

HSP 1 Score: 62.8 bits (151), Expect = 5.420e-10
Identity = 24/57 (42.11%), Postives = 42/57 (73.68%), Query Frame = 1

Query:    1 YGMVVTIDDLDRCSKDKIVNMLETVHLLLQIPKAPIVAFLAIDPRVIIAAVEDKLGE 171
            Y ++V +DDLDRC KDK++ ++E V +LL  P +  ++ LA+DPR+++ ++E+  GE
Sbjct:  803 YRVIVVVDDLDRCPKDKVIKVIEAVGILLSDPNSHFISLLAVDPRIVVKSIEESFGE 859

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BLAST of jgi.p|Trimin1|129157 vs. uniprot
Match: D7FSL6_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSL6_ECTSI)

HSP 1 Score: 62.0 bits (149), Expect = 1.000e-9
Identity = 31/59 (52.54%), Postives = 42/59 (71.19%), Query Frame = 1

Query:    1 YGMVVTIDDLDRCSKDKIVNMLETVHLLLQIPKAPIVAFLAIDPRVIIAAVEDKLGERV 177
            Y +VV+ID+LDRC   +IV +LE VHLLL+     +   LA+DPRVIIAA+E  +GE +
Sbjct:  571 YMLVVSIDNLDRCPHRQIVKVLEAVHLLLEKDNVNVAVMLALDPRVIIAAIEQDMGEGI 629

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BLAST of jgi.p|Trimin1|129157 vs. uniprot
Match: A0A6H5JLB7_9PHAE (KAP NTPase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLB7_9PHAE)

HSP 1 Score: 60.8 bits (146), Expect = 2.580e-9
Identity = 31/59 (52.54%), Postives = 42/59 (71.19%), Query Frame = 1

Query:    1 YGMVVTIDDLDRCSKDKIVNMLETVHLLLQIPKAPIVAFLAIDPRVIIAAVEDKLGERV 177
            + +VV+ID+LDRC    IV +LE VHLLL+  +  +V  LA+DPRVII+A+E  LG  V
Sbjct:  431 FALVVSIDNLDRCPHRNIVKVLEAVHLLLERDQTNVVVILALDPRVIISAIEADLGPEV 489

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BLAST of jgi.p|Trimin1|129157 vs. uniprot
Match: A0A6P4YYF4_BRABE (kinase D-interacting substrate of 220 kDa-like n=1 Tax=Branchiostoma belcheri TaxID=7741 RepID=A0A6P4YYF4_BRABE)

HSP 1 Score: 60.8 bits (146), Expect = 2.590e-9
Identity = 24/57 (42.11%), Postives = 41/57 (71.93%), Query Frame = 1

Query:    1 YGMVVTIDDLDRCSKDKIVNMLETVHLLLQIPKAPIVAFLAIDPRVIIAAVEDKLGE 171
            Y +VV +DDLDRC KD++  ++E V +LL  P +  ++ LA+DPR+++ ++E+  GE
Sbjct:  797 YRVVVVVDDLDRCPKDRVTKVIEAVGILLSDPNSHFISLLAVDPRIVVKSIEESFGE 853

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BLAST of jgi.p|Trimin1|129157 vs. uniprot
Match: A0A8K0A204_BRALA (KIDINS220 protein n=1 Tax=Branchiostoma lanceolatum TaxID=7740 RepID=A0A8K0A204_BRALA)

HSP 1 Score: 60.5 bits (145), Expect = 3.530e-9
Identity = 23/57 (40.35%), Postives = 42/57 (73.68%), Query Frame = 1

Query:    1 YGMVVTIDDLDRCSKDKIVNMLETVHLLLQIPKAPIVAFLAIDPRVIIAAVEDKLGE 171
            Y +VV +DDLDRC KD+++ ++E V +LL  P +  ++ LA+DPR+++ ++E+  G+
Sbjct:  516 YRVVVVVDDLDRCPKDRVIKVIEAVGILLSDPNSYFISLLAVDPRIVVKSIEESFGD 572

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BLAST of jgi.p|Trimin1|129157 vs. uniprot
Match: A0A8K0A0Q0_BRALA (KIDINS220 protein n=3 Tax=Branchiostoma lanceolatum TaxID=7740 RepID=A0A8K0A0Q0_BRALA)

HSP 1 Score: 60.5 bits (145), Expect = 3.540e-9
Identity = 23/57 (40.35%), Postives = 42/57 (73.68%), Query Frame = 1

Query:    1 YGMVVTIDDLDRCSKDKIVNMLETVHLLLQIPKAPIVAFLAIDPRVIIAAVEDKLGE 171
            Y +VV +DDLDRC KD+++ ++E V +LL  P +  ++ LA+DPR+++ ++E+  G+
Sbjct:  810 YRVVVVVDDLDRCPKDRVIKVIEAVGILLSDPNSYFISLLAVDPRIVVKSIEESFGD 866

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BLAST of jgi.p|Trimin1|129157 vs. uniprot
Match: C3YS08_BRAFL (KAP NTPase domain-containing protein n=2 Tax=Branchiostoma floridae TaxID=7739 RepID=C3YS08_BRAFL)

HSP 1 Score: 59.7 bits (143), Expect = 6.620e-9
Identity = 23/57 (40.35%), Postives = 41/57 (71.93%), Query Frame = 1

Query:    1 YGMVVTIDDLDRCSKDKIVNMLETVHLLLQIPKAPIVAFLAIDPRVIIAAVEDKLGE 171
            Y +VV +DDLDRC KD++  ++E V +LL  P +  ++ LA+DPR+++ ++E+  G+
Sbjct:  781 YRVVVVVDDLDRCPKDRVTKVIEAVGILLSDPNSHFISLLAVDPRIVVKSIEESFGD 837

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BLAST of jgi.p|Trimin1|129157 vs. uniprot
Match: A0A8J2SSC4_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SSC4_9STRA)

HSP 1 Score: 59.3 bits (142), Expect = 7.390e-9
Identity = 29/56 (51.79%), Postives = 41/56 (73.21%), Query Frame = 1

Query:    7 MVVTIDDLDRC-SKDKIVNMLETVHLLLQIPKAPIVAFLAIDPRVIIAAVEDKLGE 171
            +V  +DDLDRC   DKI+ MLE V LLL I  AP++ FLAIDPR++++++E+   E
Sbjct:   90 IVAFVDDLDRCIGGDKILKMLEAVQLLLSIHAAPVITFLAIDPRIVVSSIEESFTE 145

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BLAST of jgi.p|Trimin1|129157 vs. uniprot
Match: A0A835ZCW3_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCW3_9STRA)

HSP 1 Score: 286 bits (732), Expect = 8.400e-98
Identity = 144/144 (100.00%), Postives = 144/144 (100.00%), Query Frame = 1

Query:    1 YTVVVHPPLVVENLLPHEGTFELADEGRNPLWAARLEPGTSVGVYSVGMDVPLLLLLNLGFCRNMDGVHVHDGLRGGXXXXXXXEDGGDECASGITLTDAVGQRIALRVENRRGGGGQRHVTVYAPYWMVNTSHYRMRFRQDGS 432
            YTVVVHPPLVVENLLPHEGTFELADEGRNPLWAARLEPGTSVGVYSVGMDVPLLLLLNLGFCRNMDGVHVHDGLRGGXXXXXXXEDGGDECASGITLTDAVGQRIALRVENRRGGGGQRHVTVYAPYWMVNTSHYRMRFRQDGS
Sbjct:    1 YTVVVHPPLVVENLLPHEGTFELADEGRNPLWAARLEPGTSVGVYSVGMDVPLLLLLNLGFCRNMDGVHVHDGLRGGXXXXXXXEDGGDECASGITLTDAVGQRIALRVENRRGGGGQRHVTVYAPYWMVNTSHYRMRFRQDGS 144

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BLAST of jgi.p|Trimin1|129157 vs. uniprot
Match: D7G8Y9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8Y9_ECTSI)

HSP 1 Score: 149 bits (376), Expect = 6.500e-39
Identity = 82/216 (37.96%), Postives = 106/216 (49.07%), Query Frame = 1

Query:    1 YTVVVHPPLVVENLLPHEGTFELADEGRNPLWAARLEPGTSVGVYSVGMDVPLLLLLNLGFCRNMDGVHVHDGLRGGXXXXXXXE-DGGD------------------------------------------------------------------------ECASGITLTDAVGQRIALRVENRRGGGGQRHVTVYAPYWMVNTSHYRMRFRQDG 429
            YT+++HPPLVVENLLP+ G+FEL D+ +  LW A+L+ G S+GVY+ G+D PL + +NLGFCR  + V +HDG RG           GGD                                                                        E  S + LTD+VGQR+ + +ENR G GGQR+VTVY P WMVNTSHYR+R+RQDG
Sbjct: 4742 YTMMLHPPLVVENLLPYAGSFELVDQSKTVLWRAQLDSGASIGVYTAGLDTPLKMFINLGFCRTHEAVLIHDGRRGARGSLGGFNLAGGDGLNSINTRFSTNGHTRPKSGSGSGSGNIGDWISAAGSAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPAAELGSSVALTDSVGQRVEVYLENRLGDGGQRNVTVYCPVWMVNTSHYRLRYRQDG 4957

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BLAST of jgi.p|Trimin1|129157 vs. uniprot
Match: B8CBY6_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CBY6_THAPS)

HSP 1 Score: 116 bits (290), Expect = 2.460e-27
Identity = 72/218 (33.03%), Postives = 99/218 (45.41%), Query Frame = 1

Query:    1 YTVVVHPPLVVENLLPHEGTFELADE-GRNPLWAARLEPGTSVGVYSVGMDVPLLLLLNLGFCRNM--DGVHVHDG---------------------------------------------LRGGXXXXXXXED----------------------------GGDECASGITLTDAVGQRIALRVENRRGGGGQRHVTVYAPYWMVNTSHYRMRFRQD 426
            YT+V+HPP+V+ENLLP  G FEL D   RN LW   LE G  V VY+VG+D PL+LLLNLGFCR    +G  +H G                                             L+GG                                     G ++ AS   + D++GQR+ L ++N  GGGGQR V++Y PYW+VNT+ + +++RQ+
Sbjct: 3144 YTLVIHPPIVIENLLPERGRFELMDATNRNVLWHGVLEAGQKVPVYTVGLDSPLMLLLNLGFCRTPVGEGALIHHGGGDGLFRAGWNTLGNAMKTSKEKVKRTLYTMTESKDIRGAGRLSILKGGMKKAASGSRKVGRLGFDTENEAIEESARGGMWRGDGFGAEDVASETNVVDSLGQRLTLLIDNVIGGGGQRRVSLYCPYWIVNTTEHSLKYRQE 3361

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BLAST of jgi.p|Trimin1|129157 vs. uniprot
Match: K0SGL5_THAOC (PDZ domain-containing protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SGL5_THAOC)

HSP 1 Score: 110 bits (274), Expect = 3.450e-25
Identity = 71/218 (32.57%), Postives = 102/218 (46.79%), Query Frame = 1

Query:    1 YTVVVHPPLVVENLLPHEGTFELADEG-RNPLWAARLEPGTSVGVYSVGMDVPLLLLLNLGFCRNM-DGVHVHDG---------------------------------------------LRGGXXXXXXXE--------------------------DGG---DECASGITLTDAVGQRIALRVENRRGGGGQRHVTVYAPYWMVNTSHYRMRFRQD 426
            YT+V+HPP+V+ENLLP  G FEL D   RN LW A LEPG  V V++VG+D PLLLL+N  +C+ + DG  VH G                                             L+ G       E                          DGG   ++ AS +T+ D+ GQ++ L ++N  G GGQR V+VY P+W+VNT+ + ++++Q+
Sbjct: 2093 YTLVIHPPIVIENLLPERGRFELMDGNTRNVLWWAILEPGEIVPVHTVGLDSPLLLLVNFVYCKTIGDGALVHRGEAEGILRAGWNTIGTAVKTSRDRVKKTLNTITDTKDNRGVTKFNMLQAGGKTPAKGEQLGFSSENDSIIESTGLSTSARRISGDGGFGSEDVASELTVVDSQGQKLTLLLDNESGRGGQRRVSVYCPFWIVNTTEHSLKYKQE 2310

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BLAST of jgi.p|Trimin1|129157 vs. uniprot
Match: A0A7R9UEG4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UEG4_9STRA)

HSP 1 Score: 101 bits (251), Expect = 4.340e-22
Identity = 55/148 (37.16%), Postives = 81/148 (54.73%), Query Frame = 1

Query:    1 YTVVVHPPLVVENLLPHEGTFELADEGRNPL-WAARLEPGTSVGVYSVGMDVPLLLLLNLGFCRNMDGVH-VHDGLRGGXXXXXXX---EDGGDECASGITLTDAVGQRIALRVENRRGGGGQRHVTVYAPYWMVNTSHYRMRFRQDG 429
            Y ++VHPP+V+ENLLP    F+L    +  + W+  L  G  V V++VG++ PL LL+ L F  ++     +H G              +   +  A  I L D  GQ++ L +EN  GGGGQR V VY PYWMVNT+   +R+ ++G
Sbjct: 1281 YRLIVHPPIVLENLLPRPAVFKLMHGIQERIVWSGTLRAGERVPVHTVGLEAPLRLLMKLDFAESVAPYALIHTGAESSTQTGFGLLLSQIINESVAKQIVLRDIQGQKLHLAIENTLGGGGQRQVVVYCPYWMVNTTGMDIRYHEEG 1428

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BLAST of jgi.p|Trimin1|129157 vs. uniprot
Match: A0A1Z5JFP8_FISSO (PDZ domain-containing protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JFP8_FISSO)

HSP 1 Score: 100 bits (250), Expect = 5.900e-22
Identity = 68/224 (30.36%), Postives = 97/224 (43.30%), Query Frame = 1

Query:    1 YTVVVHPPLVVENLLPHEGTFELADE-GRNPLWAARLEPGTSVGVYSVGMDVPLLLLLNLGFCRNM--DGVHVHDG------LR------------------------------------------------------------GGXXXXXXXEDGG-----------DECASGITLTDAVGQRIALRVENRRGGGGQRHVTVYAPYWMVNTSHYRMRFRQDGS 432
            Y++ +HPP VV NLLP  G FEL     +  LW   +EPG  V V+S+G+D PL+L +NLGFCR    +G  VH G      LR                                                            G         DG            ++ A G T+ D++GQ++ L++EN RGGGGQR ++VY P+W+VNT+   +R++Q+ S
Sbjct: 2619 YSLSIHPPFVVVNLLPKIGRFELMHAVHKKVLWFKDVEPGEEVSVHSLGLDSPLMLYINLGFCRTPVGEGALVHHGADHNARLRENLVGLKSIGKAGKAVTKQIGKTLTSIGDSPDKRAQNKIFKAQNPHLKERTSSKQKRVRIGNTNDSQGAADGKTYRVDSSSYSPEDVADGATVVDSLGQKLRLQIENIRGGGGQRRISVYCPFWVVNTTELPLRYKQENS 2842

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BLAST of jgi.p|Trimin1|129157 vs. uniprot
Match: W7TRD9_9STRA (Vacuolar protein sorting-associated protein 13 family protein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TRD9_9STRA)

HSP 1 Score: 100 bits (250), Expect = 5.960e-22
Identity = 54/144 (37.50%), Postives = 83/144 (57.64%), Query Frame = 1

Query:    1 YTVVVHPPLVVENLLPHEGTFELAD-EGRNPLWAARLEPGTSVGVYSVGMDVPLLLLLNLGFCRNMDGVHVHDGLRGGXXXXXXXEDGGDECASGITLTDAVGQRIALRVENRRGGGGQRHVTVYAPYWMVNTSHYRMRFRQDG 429
            Y +V+HPPLV+ENLLP    F L D   +  LW A L+ G S+ ++ V +D  +LL +    CR+ + V +H G  GG        D   + A  IT+ DA  Q++ L++E++ GG GQR   +Y PYW+VN ++  + + Q+G
Sbjct: 2982 YMIVIHPPLVLENLLPEACVFRLYDFTSKAMLWKAHLQAGQSMPIHDVRVDCSVLLDVQTEDCRSTESVLIHKG--GGALRGMEAID--HDVAKFITMMDAENQKLLLQLEHQVGGAGQRRTILYCPYWLVNNTNCLLTYIQEG 3121

[Close]

BLAST of jgi.p|Trimin1|129157 vs. uniprot
Match: A0A1Z5KNZ8_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KNZ8_FISSO)

HSP 1 Score: 100 bits (248), Expect = 1.110e-21
Identity = 67/224 (29.91%), Postives = 97/224 (43.30%), Query Frame = 1

Query:    1 YTVVVHPPLVVENLLPHEGTFELADE-GRNPLWAARLEPGTSVGVYSVGMDVPLLLLLNLGFCRNM--DGVHVHDG------LR------------------------------------------------------------GGXXXXXXXEDGG-----------DECASGITLTDAVGQRIALRVENRRGGGGQRHVTVYAPYWMVNTSHYRMRFRQDGS 432
            Y++ +HPP VV NLLP +G FEL     +  LW   +EPG  V V+S+G+D PL+L +NLGFCR    +G  VH G      LR                                                            G         DG             + A  +T+ D++GQ++ L++EN RGGGGQR ++VY P+W+VNT+   +R++Q+ S
Sbjct: 2622 YSLSIHPPFVVINLLPKKGRFELVHAVHKKVLWVKDVEPGEEVAVHSLGLDSPLVLYINLGFCRTPVGEGALVHHGADHNARLRENLIGLKSIGKAGKAVTKQIGKTLTAIGDSPDKRAQNKISRAQNPHLLQRKSPQQKQVRIGNTNDSQGAADGKTYRVDSSSYSPQDVADVVTVVDSLGQKLRLQIENIRGGGGQRRISVYCPFWVVNTTELPLRYKQENS 2845

[Close]

BLAST of jgi.p|Trimin1|129157 vs. uniprot
Match: A0A7S2Y632_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2Y632_9STRA)

HSP 1 Score: 98.2 bits (243), Expect = 5.170e-21
Identity = 70/229 (30.57%), Postives = 93/229 (40.61%), Query Frame = 1

Query:    1 YTVVVHPPLVVENLLPHEGTFELADEGRNP-LWAARLEPGTSVGVYSVGMDVPLLLLLNLGFCRNM--DGVHVHDGL---------------------------------------RGGXXXXXXXED----------------------GGDE---------------------CASGITLTDAVGQRIALRVENRRGGGGQRHVTVYAPYWMVNTSHYRMRFRQDGS 432
            YT+ V+ P VV NLLP  G FEL    R   LW A LEPG  V V+SVG+D PLLLL+NL FCR    +G  VH G+                                       + G       ++                       GD                      C     + D VGQR+ L +EN RGGGGQR ++VY P+W++NT+ + + +RQ+ S
Sbjct:  953 YTLSVYAPFVVANLLPEPGRFELMHAVRKTVLWFADLEPGQQVSVHSVGLDAPLLLLINLRFCRTPIGEGALVHHGVDPPPEAREHLGRLRSIGKAGKAVTMQLGKTLTALGESPDKRGHDRLYLAQNKENQPIHDKKGHHNTKRVAKVSAGDSATEDVDGKTYRVDTTIFFPENCVDETVVVDGVGQRLTLGIENIRGGGGQRRISVYCPFWIINTTEHALAYRQERS 1181

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BLAST of jgi.p|Trimin1|129157 vs. uniprot
Match: A0A482SP39_9ARCH (SHR-BD domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SP39_9ARCH)

HSP 1 Score: 89.0 bits (219), Expect = 3.600e-20
Identity = 45/102 (44.12%), Postives = 60/102 (58.82%), Query Frame = 1

Query:  157 LLLLLNLGFCRNMDGVHVH-DGLRGGXXXXXXX----------EDGGDECASGITLTDAVGQRIALRVENRRGGGGQRHVTVYAPYWMVNTSHYRMRFRQDG 429
            +LL++NL +CR  +GV +H   L G                  +D G++    I LTD VGQ++ L VEN +GGGGQRHV VY PYW+VNTS Y  R R++G
Sbjct:    1 MLLIINLRYCRASEGVLIHRPNLAGNPPLSLVNRLQKAIEGILDDSGEDDVYSIVLTDTVGQKLRLNVENTQGGGGQRHVVVYCPYWVVNTSQYAFRVREEG 102

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|129157 vs. uniprot
BLAST of jgi.p|Trimin1|129157 vs. uniprot

BLAST of jgi.p|Trimin1|129157 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A835Z3E7_9STRA	1.350e-33	100.00	KAP NTPase domain-containing protein (Fragment) n=...	[more]
A0A835YXA7_9STRA	1.220e-23	81.03	KAP NTPase domain-containing protein n=1 Tax=Tribo...	[more]
A0A6P5A1I9_BRABE	5.420e-10	42.11	kinase D-interacting substrate of 220 kDa-like n=1...	[more]
D7FSL6_ECTSI	1.000e-9	52.54	Hypothetical leucine rich repeat protein n=1 Tax=E...	[more]
A0A6H5JLB7_9PHAE	2.580e-9	52.54	KAP NTPase domain-containing protein n=1 Tax=Ectoc...	[more]
A0A6P4YYF4_BRABE	2.590e-9	42.11	kinase D-interacting substrate of 220 kDa-like n=1...	[more]
A0A8K0A204_BRALA	3.530e-9	40.35	KIDINS220 protein n=1 Tax=Branchiostoma lanceolatu...	[more]
A0A8K0A0Q0_BRALA	3.540e-9	40.35	KIDINS220 protein n=3 Tax=Branchiostoma lanceolatu...	[more]
C3YS08_BRAFL	6.620e-9	40.35	KAP NTPase domain-containing protein n=2 Tax=Branc...	[more]
A0A8J2SSC4_9STRA	7.390e-9	51.79	Hypothetical protein n=1 Tax=Pelagomonas calceolat...	[more]

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BLAST of jgi.p|Trimin1|129157 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 16


Match Name	E-value	Identity	Description
A0A835ZCW3_9STRA	8.400e-98	100.00	Uncharacterized protein (Fragment) n=1 Tax=Tribone...	[more]
D7G8Y9_ECTSI	6.500e-39	37.96	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
B8CBY6_THAPS	2.460e-27	33.03	Uncharacterized protein n=1 Tax=Thalassiosira pseu...	[more]
K0SGL5_THAOC	3.450e-25	32.57	PDZ domain-containing protein (Fragment) n=1 Tax=T...	[more]
A0A7R9UEG4_9STRA	4.340e-22	37.16	Hypothetical protein (Fragment) n=1 Tax=Pinguiococ...	[more]
A0A1Z5JFP8_FISSO	5.900e-22	30.36	PDZ domain-containing protein n=1 Tax=Fistulifera ...	[more]
W7TRD9_9STRA	5.960e-22	37.50	Vacuolar protein sorting-associated protein 13 fam...	[more]
A0A1Z5KNZ8_FISSO	1.110e-21	29.91	Uncharacterized protein n=1 Tax=Fistulifera solari...	[more]
A0A7S2Y632_9STRA	5.170e-21	30.57	Hypothetical protein n=1 Tax=Amphiprora paludosa T...	[more]
A0A482SP39_9ARCH	3.600e-20	44.12	SHR-BD domain-containing protein n=1 Tax=archaeon ...	[more]

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_2	contig	Contig_2:2009988..2010170 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|129157\|gw1.2.10.1
Max annot lvl	2759\|Eukaryota
EggNOG OGs	2E19U@1\|root,2S8MQ@2759\|Eukaryota
Evalue	1.64e-10
Seed ortholog	2880.D7FSL6
Hectar predicted targeting category	other localisation
TranscriptId	129479
Track	FilteredModels1
ProteinId	129157

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|129157	gene_884	Tribonema minus UTEX_B_3156	gene	Contig_2 2009988..2010170 -

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_884_1	exon_884_1	Tribonema minus UTEX_B_3156	exon	Contig_2 2009988..2010170 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_884	CDS_884	Tribonema minus UTEX_B_3156	CDS	Contig_2 2009988..2010170 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|129157	Trimin1\|129157\|gw1.2.10.1	Tribonema minus UTEX_B_3156	polypeptide	Contig_2 2009988..2010170 -

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_2:2009988..2010170-
coding sequence from alignment at Contig_2:2009988..2010170-

spliced messenger RNA

>mRNA_884 ID=mRNA_884|Name=jgi.p|Trimin1|129157|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=183bp|location=Sequence derived from alignment at Contig_2:2009988..2010170- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
TATGGCATGGTGGTGACCATCGATGACCTTGACCGCTGCTCCAAGGACAA
GATCGTTAACATGTTGGAGACTGTCCATCTGCTGCTGCAAATCCCCAAGG
CGCCCATTGTGGCATTCCTGGCTATTGACCCACGCGTCATCATTGCTGCA
GTGGAGGACAAGTTAGGCGAGCGTGTGACGCAG

protein sequence of jgi.p|Trimin1|129157

>Trimin1|129157|gw1.2.10.1 ID=Trimin1|129157|gw1.2.10.1|Name=jgi.p|Trimin1|129157|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=61bp
YGMVVTIDDLDRCSKDKIVNMLETVHLLLQIPKAPIVAFLAIDPRVIIAA
VEDKLGERVTQ

mRNA from alignment at Contig_2:2009988..2010170-

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_884 ID=mRNA_884|Name=jgi.p|Trimin1|129157|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=183bp|location=Sequence derived from alignment at Contig_2:2009988..2010170- (Tribonema minus UTEX_B_3156 )
TATGGCATGGTGGTGACCATCGATGACCTTGACCGCTGCTCCAAGGACAA
GATCGTTAACATGTTGGAGACTGTCCATCTGCTGCTGCAAATCCCCAAGG
CGCCCATTGTGGCATTCCTGGCTATTGACCCACGCGTCATCATTGCTGCA
GTGGAGGACAAGTTAGGCGAGCGTGTGACGCAG

Coding sequence (CDS) from alignment at Contig_2:2009988..2010170-

>mRNA_884 ID=mRNA_884|Name=jgi.p|Trimin1|129157|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=183bp|location=Sequence derived from alignment at Contig_2:2009988..2010170- (Tribonema minus UTEX_B_3156 )
TATGGCATGGTGGTGACCATCGATGACCTTGACCGCTGCTCCAAGGACAA
GATCGTTAACATGTTGGAGACTGTCCATCTGCTGCTGCAAATCCCCAAGG
CGCCCATTGTGGCATTCCTGGCTATTGACCCACGCGTCATCATTGCTGCA
GTGGAGGACAAGTTAGGCGAGCGTGTGACGCAG