mRNA_8761 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|167547
Unique NamemRNA_8761
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
[Close]
BLAST of jgi.p|Trimin1|167547 vs. uniprot
Match: A0A836CAS6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAS6_9STRA)

HSP 1 Score: 705 bits (1819), Expect = 2.340e-256
Identity = 358/358 (100.00%), Postives = 358/358 (100.00%), Query Frame = 1 
Query:    1 MSEAAGSAHNAGAALRNAVCALLAALRIPLVVYQIQTQFASITGALLPQAYHTFLNWLNAVGFDLRWVLPLGCAADLNFYQRLLVATLAPLGVGTLLFTPRVIAALLPRELPSGRLAARIRAKAARLAAADLKLFLVFTFVIFSGVSAIVLQTFACETLKGTGLRYLRADYSIRCQTSEHSAYMVYAGFMILVYPIGIQPFMPGCCGSTVSMQKYCSTPAARARTLQSSLQAYYQRADYWECVECVRRISLTGLLVFIAPGTSSQYVAACALSFGAIVVYELVQPHRLRADTCLYTLGGVITWGVTFLAALTGGPAAAANVDGNALSERGAAAGVVLIALNVCCLCWRWPWHLLWGKK 1074
            MSEAAGSAHNAGAALRNAVCALLAALRIPLVVYQIQTQFASITGALLPQAYHTFLNWLNAVGFDLRWVLPLGCAADLNFYQRLLVATLAPLGVGTLLFTPRVIAALLPRELPSGRLAARIRAKAARLAAADLKLFLVFTFVIFSGVSAIVLQTFACETLKGTGLRYLRADYSIRCQTSEHSAYMVYAGFMILVYPIGIQPFMPGCCGSTVSMQKYCSTPAARARTLQSSLQAYYQRADYWECVECVRRISLTGLLVFIAPGTSSQYVAACALSFGAIVVYELVQPHRLRADTCLYTLGGVITWGVTFLAALTGGPAAAANVDGNALSERGAAAGVVLIALNVCCLCWRWPWHLLWGKK
Sbjct:    1 MSEAAGSAHNAGAALRNAVCALLAALRIPLVVYQIQTQFASITGALLPQAYHTFLNWLNAVGFDLRWVLPLGCAADLNFYQRLLVATLAPLGVGTLLFTPRVIAALLPRELPSGRLAARIRAKAARLAAADLKLFLVFTFVIFSGVSAIVLQTFACETLKGTGLRYLRADYSIRCQTSEHSAYMVYAGFMILVYPIGIQPFMPGCCGSTVSMQKYCSTPAARARTLQSSLQAYYQRADYWECVECVRRISLTGLLVFIAPGTSSQYVAACALSFGAIVVYELVQPHRLRADTCLYTLGGVITWGVTFLAALTGGPAAAANVDGNALSERGAAAGVVLIALNVCCLCWRWPWHLLWGKK 358
[Close]
BLAST of jgi.p|Trimin1|167547 vs. uniprot
Match: A0A835YQE5_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQE5_9STRA)

HSP 1 Score: 436 bits (1120), Expect = 4.690e-151
Identity = 228/286 (79.72%), Postives = 245/286 (85.66%), Query Frame = 1 
Query:   91 VVYQIQTQFASITGALLPQAYHTFLNWLNAVGFDLRWVLPLGCAADLNFYQRLLVATLAPLGVGTLLFTPRVIAALLPRELPSGRLAARIRAKAARLAAADLKLFLVFTFVIFSGVSAIVLQTFACETLKGTGLRYLRADYSIRCQTSEHSAYMVYAGFMILVYPIGIQPFMPGCCGST---VSMQKYCSTPAARARTLQSSL--QAYYQRADYWECVECVRRISLTGLLVFIAPGTSSQYVAACALSFGAIVVYELVQPHRLRADTCLYTLGGVITWGVTFLAAL 933
            VVYQIQTQFASITGALLPQAYHTFL WL+AV FDLRW LPLGCAADLNFYQRLL+ATLAPL +GTLLFTPRVI AL+PRELPS RLAARIR KAARLAAADLKLFLVFTFVIFSGVS IVLQTFACETL+GTG+ YLRADYS++CQTSEHSAYMVYAGFMILVYPIGI                + ++ S+ A    +  S+   +AY QRADYWECVECVRRISLTGLLVFIAPGT SQY AACALSFGAIV+YELV+PHRLRADTCLYTLGGVITWG TFLAAL
Sbjct:    1 VVYQIQTQFASITGALLPQAYHTFLRWLDAVNFDLRWALPLGCAADLNFYQRLLMATLAPLAIGTLLFTPRVIVALIPRELPSRRLAARIRTKAARLAAADLKLFLVFTFVIFSGVSTIVLQTFACETLEGTGISYLRADYSMKCQTSEHSAYMVYAGFMILVYPIGIPALYAWVLRQHRKHADVLQHASSKAMSPLSRASAFLRKAYSQRADYWECVECVRRISLTGLLVFIAPGTPSQYAAACALSFGAIVIYELVRPHRLRADTCLYTLGGVITWGSTFLAAL 286
[Close]
BLAST of jgi.p|Trimin1|167547 vs. uniprot
Match: A0A836C6Y5_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C6Y5_9STRA)

HSP 1 Score: 405 bits (1042), Expect = 1.040e-138
Identity = 219/320 (68.44%), Postives = 248/320 (77.50%), Query Frame = 1 
Query:   91 VVYQIQTQFASITGALLPQAYHTFLNWLNAVGFDLRWVLPLGCAADLNFYQRLLVATLAPLGVGTLLFTPRVIAALLPRELPSGRLAA-RIRAKAARLAAADLKLFLVFTFVIFSGVSAIVLQTFACETLKGTGLRYLRADYSIRCQTSEHSAYMVYAGFMILVYPIGIQPFMPGCCGSTVSMQKYCST-----PAARARTLQSSL--QAYYQRADYWECVECVRRISLTGLLVFIAPGTSSQYVAACALSFGAIVVYELVQPHRLRADTCLYTLGGVITWGVTFLAALTGGPAAAANVDGNALSERGAAAGVVLIALNV 1026
            VVYQI TQF  ITGALLPQAY TFL WL+ + FDL W LP+GC  DLNFYQRLLV+TLAPLGV  LLF PR  AA+L R+  S  L A R+++KA RLA+ADL+L LVFTF+IFSGVS +V QTFACE  + TG  +LRADYSI C+T EH AY+ YAGFMI VYPIGI    P   G  +   +  +      PA+   T  S+   +AY+QRADYWEC+EC+RRISLTG LVFIAPGT SQYVAACALSFGAIV+YELVQPHRLRADTCLYTLGGVITW   +LAALTGGPAAAA V+GNALSERGAAAGVVLI LNV
Sbjct:    1 VVYQIHTQFTRITGALLPQAYRTFLQWLSVINFDLCWTLPVGCIVDLNFYQRLLVSTLAPLGVVGLLFMPRASAAVLSRDSFSATLVAQRVKSKATRLASADLQLLLVFTFIIFSGVSTVVFQTFACEEFEATGASFLRADYSISCRTPEHKAYIAYAGFMIFVYPIGI----PVLYGWVLRRHRTHTAMLHPVPASSPVTHASAFLRKAYHQRADYWECMECIRRISLTGSLVFIAPGTPSQYVAACALSFGAIVIYELVQPHRLRADTCLYTLGGVITWMTMYLAALTGGPAAAATVEGNALSERGAAAGVVLIVLNV 316
[Close]
BLAST of jgi.p|Trimin1|167547 vs. uniprot
Match: A0A835YNB8_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNB8_9STRA)

HSP 1 Score: 226 bits (575), Expect = 4.910e-68
Identity = 126/281 (44.84%), Postives = 169/281 (60.14%), Query Frame = 1 
Query:   76 LRIPLVVYQIQTQFASITGALLPQAYHTFLNWLNAVGFDLRWVLPLGCAADLNFYQRLLVATLAPLGVGTLLFTPRVIAALLPRELPSGRLAARIRAKAARLAAADLKLFLVFTFVIFSGVSAIVLQTFAC--ETLKGTGLRYLRADYSIRCQTSE--HSAYMVYAGFMILVYPIGIQPFMPGCCGSTVSMQKYCSTPAARARTLQSSLQAYYQ-RADYWECVECVRRISLTGLLVFIAPGTSSQYVAACALSFGAIVVYELVQPHRLRADTCLYTLGGVI 903
            LRIP++V Q+ TQ+ SITG  LP  Y  FL  ++ +  D+RW+   GCAAD++FY RLL+ATLAPL +  L+F+PR+    + R  P+      +  K  ++   D+  FLVFTF+IFSGVS  V +TFAC  E  + TG  YL ADYS++C   E  H  Y +YAGFM++VYP+GI            + Q+      +R  +  S L + Y+ RA YWE  ECVRR+ L+GLLVFI PGT  Q   AC  +F   +VYE ++PH    D  LYTLG VI
Sbjct:    1 LRIPVIVLQVLTQYISITGIALPLQYLNFLRAVDFMSLDMRWLTSPGCAADIDFYGRLLIATLAPLVITALIFSPRLYLCFISRRRPA------VAPKLRQIVTRDVNAFLVFTFLIFSGVSLTVFETFACDKELKEFTGNIYLHADYSLQCSDDEGLHKKYSIYAGFMVVVYPVGIPLMYAAILWRVAARQREHGQQPSRLTSASSFLWSSYEGRAYYWESAECVRRLMLSGLLVFIMPGTPGQSAVACIFAFVTTMVYEKIRPHHDSMDMWLYTLGCVI 275
[Close]
BLAST of jgi.p|Trimin1|167547 vs. uniprot
Match: A0A836CBB8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBB8_9STRA)

HSP 1 Score: 233 bits (594), Expect = 1.970e-67
Identity = 153/342 (44.74%), Postives = 198/342 (57.89%), Query Frame = 1 
Query:   37 AALRNAVCALLAALRIPLVVYQIQTQFASITGALLPQAYHTFLNWLNAVGFDLRWVLPLGCAADLNFYQRLLVATLAPLGVGTLLFTPRVIAALLPRELPSGRLAARIRAKAARLAAADLKLFLVFTFVIFSGVSAIVLQTFACE-TLKGTGLRYLRADYSIRCQTSEHSAYMVYAGFMILVYPIGIQPFMPGCC-----------GSTVSMQKYCSTPAARARTLQSSLQAYYQRADYWECVECVRRISLTGLLVFIAPGTSSQYVAACALSFGAIVVYELVQPHRLRADTCLYTLGGVITWGVTFLAALTGGPAAAANVDGNALSERGAAAGVVLIALNV 1026
            A L  A+  +   LRIP+VV+Q+ TQF  +TG LLP  Y  FL  L+ V  DL W+    C A+ NFY RLL++TLAP  V  L+FTPR++A  +     +   A+R      R+ A D+   LVF F+IFSGVS  V QTFAC+ TL    + YLRADYSIRC T  H A+M YA  MILVYPIGI P +  C            G  +S+    +T AA +       + Y   A Y+EC ECVRR+ LTG+LVFI PGT+ Q  AAC  +F   V Y+ V+PHR R+D CLY +G ++ +   F A L  G    A +  N +S+  AA G +LIALNV
Sbjct:  286 ALLMMALALVFRRLRIPVVVFQVLTQFVRVTGVLLPLHYLQFLRGLDFVNLDLTWLTAPACVANFNFYDRLLISTLAPPVVAMLIFTPRMVAVAVSHARGA---ASRGPPLLQRVIARDMNALLVFVFLIFSGVSLTVFQTFACDDTLP---VAYLRADYSIRCYTPAHRAHMAYAAAMILVYPIGI-PALFACTLRRHMLRQRQRGEALSVDPPPTTEAAASAAFL--WRPYRTNAPYYECAECVRRLLLTGVLVFITPGTAGQSAAACVFAFATSVAYDHVRPHRARSDACLYVVGYIVIFASMFTALLMQG----AYI--NDVSQ--AAIGGLLIALNV 610
[Close]
BLAST of jgi.p|Trimin1|167547 vs. uniprot
Match: A0A835YTX2_9STRA (Uncharacterized protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTX2_9STRA)

HSP 1 Score: 224 bits (572), Expect = 4.790e-67
Identity = 144/322 (44.72%), Postives = 185/322 (57.45%), Query Frame = 1 
Query:   79 RIPLVVYQIQTQFASITGALLPQAYHTFLNWLNAVGFDLRWVLPLGCAADLNFYQRLLVATLAPLGVGTLLFTPRVIAALLPRELPSGRLAARIRAKAARLAAADLKLFLVFTFVIFSGVSAIVLQTFACETLKGTGLRYLRADYSIRCQTSE--HSAYMVYAGFMILVYPIGIQPFMPGCCG-STVSMQKYCSTPAARARTLQSSLQAYYQRADYWECVECVRRISLTGLLVFIAPGTSSQYVAACALSFGAIVVYELVQPHRLRADTCLYTLGGVITWGVTFLAALTGGPAAAANVDGNALSERGAAAGVVLIALNVCCL 1035
            RIP+VV Q+ TQ+ SITG  LP  Y  FL  ++ +  D+RW+   GCAAD++FY RLLV TLAPL +  L+F+PR    L  R    G +A ++R   +R    D+  FLV TF+IFSGVS  V +TF C+ L  TG  YLRADYS+RC   E  H+ Y +YA FMI+VYP+GI          S V  +     P+  A       + Y  RA YWE  ECVRR+ L GLLVFI PG+  Q   AC  +F   +VYE V+PH+ R D  LYTLG    +G+   +  T        V+GN  SE+  A G +LIALNV  L
Sbjct:    5 RIPIVVLQVLTQYISITGLALPLQYLRFLRAVDFMSLDMRWLTSPGCAADVDFYGRLLVTTLAPLVITALIFSPRFYLWLASRR-SHGTVAPKLREVVSR----DVNAFLVSTFLIFSGVSLTVFETFGCDELN-TGKSYLRADYSLRCDDEEGTHAKYSIYAAFMIVVYPVGIPALYASILWRSAVRQRDRTQLPSRLASATSFLWRPYKGRAYYWETAECVRRLMLAGLLVFIMPGSPGQSAVACMFAFFTAMVYEQVRPHQERMDKWLYTLG----YGIVVCSMFTSLLMQVQWVEGN--SEK--AIGNLLIALNVLLL 312
[Close]
BLAST of jgi.p|Trimin1|167547 vs. uniprot
Match: A0A836CDQ4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDQ4_9STRA)

HSP 1 Score: 228 bits (582), Expect = 4.870e-64
Identity = 129/285 (45.26%), Postives = 172/285 (60.35%), Query Frame = 1 
Query:   64 LLAALRIPLVVYQIQTQFASITGALLPQAYHTFLNWLNAVGFDLRWVLPLGCAADLNFYQRLLVATLAPLGVGTLLFTPRVIAALLPRELPSGRLAARIRAKAARLAAADLKLFLVFTFVIFSGVSAIVLQTFACET--LKGTGLRYLRADYSIRCQTSE--HSAYMVYAGFMILVYPIGIQPFMPGCCGSTVSMQKYCSTPAARARTLQSSLQAYYQ-RADYWECVECVRRISLTGLLVFIAPGTSSQYVAACALSFGAIVVYELVQPHRLRADTCLYTLGGVI 903
            L+  LRIP+VV Q+ TQ+ SITG  LP  Y  FL  ++ +  D+RW+   GCAAD++FY RLL+ATLAPL +  L+F+PR+    + R  P+      +  K  ++   D+  FLVFTF+IFSGVS  V +TFAC+    K TG  YL ADYS+RC   E  H  Y +YAGFM++VYP+GI          + + Q+      +R     S L + Y+ RA YWE VECVRR+ L+GLLVFI PGT  Q   AC  +F   ++YE ++PH    D  LYTLG VI
Sbjct:  579 LMQRLRIPIVVLQVLTQYISITGLALPLQYLQFLRAVDFMSLDMRWLTSPGCAADIDFYGRLLIATLAPLVIIALIFSPRLYLCFISRRRPA------VAPKLRQIVTRDVNAFLVFTFLIFSGVSLTVFETFACDENLQKFTGNTYLHADYSLRCNDDEGLHKKYSIYAGFMVVVYPVGIPLMYAAILWRSAARQREHGQQPSRLAPASSFLWSSYKGRAYYWESVECVRRLMLSGLLVFIMPGTPGQSAVACIFAFVTTMMYEKIRPHHDSMDMWLYTLGCVI 857
[Close]
BLAST of jgi.p|Trimin1|167547 vs. uniprot
Match: A0A836CFC3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFC3_9STRA)

HSP 1 Score: 230 bits (587), Expect = 5.840e-64
Identity = 148/345 (42.90%), Postives = 192/345 (55.65%), Query Frame = 1 
Query:    7 EAAGSAHNAGAALRNAVCALLAALRIPLVVYQIQTQFASITGALLPQAYHTFLNWLNAVGFDLRWVLPLGCAADLNFYQRLLVATLAPLGVGTLLFTPRVIAALLPRELPSGRLAARIRAKAARLAAADLKLFLVFTFVIFSGVSAIVLQTFACETLKGTGLRYLRADYSIRCQTSE--HSAYMVYAGFMILVYPIGIQPFMPGCCGSTVSMQKYCSTPAARARTLQSSLQAYYQRADYWECVECVRRISLTGLLVFIAPGTSSQYVAACALSFGAIVVYELVQPHRLRADTCLYTLGGVITWGVTFLAALTGGPAAAANVDGNALSERGAAAGVVLIALNVCCL 1035
            +A G+A    + L      L+   RIP+VV Q+ TQ+ SITG  LP  Y  FL+ ++ +  D+RW+   GC AD+NFY RLLVA LAPL +  L+F+PR    ++ R     RLA  +  K  ++ A D+  FLVFTF+IFSGVS  V +TF C+ LK TG  YLRADYSI C   E  H+ + +YA FMI+VYP+GI          +V        P+  A       + Y  RA YWE VEC+RR+ L GLLVFI PG   Q   AC   F   +VYE + PH+   D  LYTLG  I +G  F + L         V+G   SE+  A G +LIALNV  L
Sbjct: 1132 QAVGAAAGPSSKLARVGVLLMQRFRIPIVVIQVLTQYISITGLTLPLKYLEFLHAVDFLSLDMRWLTSPGCVADINFYGRLLVAKLAPLVISALIFSPRFYLWIVSRR----RLA--VAPKLQQVVARDVNAFLVFTFLIFSGVSLTVFETFGCDELKFTGKSYLRADYSIECGDDEGLHTKFSIYAAFMIMVYPVGIPVLYASILWRSVRQCDRTQLPSRLATASSFLWRPYKGRAYYWETVECLRRLMLAGLLVFIMPGEPGQSAVACLFVFFTAMVYEQIHPHQQGMDKWLYTLGYAILFGSMFTSLLM----QVRWVEGG--SEQ--AVGNLLIALNVLLL 1462
[Close]
BLAST of jgi.p|Trimin1|167547 vs. uniprot
Match: A0A835ZGI9_9STRA (Beta_helix domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGI9_9STRA)

HSP 1 Score: 226 bits (576), Expect = 9.220e-64
Identity = 151/339 (44.54%), Postives = 197/339 (58.11%), Query Frame = 1 
Query:   28 NAGAALRNAVCALLAA--LRIPLVVYQIQTQFASITGALLPQAYHTFLNWLNAVGFDLRWVLPLGCAADLNFYQRLLVATLAPLGVGTLLFTPRVIAALLPRELPSGRLAARIRAKAARLAAADLKLFLVFTFVIFSGVSAIVLQTFACETLKGTGLRYLRADYSIRCQTSEHSAYMVYAGFMILVYPIGIQPFMPGCCGSTVSMQKYCSTPAARARTLQSSL-QAYYQRADYWECVECVRRISLTGLLVFIAPGTSSQYVAACALSFGAIVVYELVQPHRLRADTCLYTLGGVITWGVTFLAALTGGPAAAANVDGNALSERGAAAGVVLIALNVCCL 1035
            +AGAAL+    ALL    LRIP+VV Q+ TQ+ SITG  LP  Y  FL  ++ +  DLRW+   GCA  L+FY RLL+ TLAPL    L+F PR+    + R    GR   ++R    +L A D+ +FLVFTF+IFSGVS  V +TF C+        YLRADYS+ C TS H+A+ VYAG M+LVYP+GI P +        ++       A+R  T  S L + Y  RA YWEC EC RR+ L G LVFI PGT+ Q   AC  +    +VYE ++PH+   D  LYTLG    +G+ F +  T     A  +DG+  SE+  A G +LIALNV  L
Sbjct:  436 SAGAALKVTRIALLLMQRLRIPIVVLQVLTQYVSITGISLPLQYLRFLRAIDFLSLDLRWLTSPGCAVHLDFYGRLLLTTLAPLVATALIFLPRLYVWTMSRR---GRTCPKLR----QLIAKDVNVFLVFTFLIFSGVSLRVFETFGCDG--SLSRSYLRADYSLECGTSRHTAFSVYAGVMVLVYPVGI-PLLYAAVLRHSAVTHRAGGQASRYATAASFLWRPYRGRAYYWECAECFRRLILAGFLVFILPGTAGQSAVACVFAVFTGMVYEQIRPHQEPMDKWLYTLG----YGIIFASMFTSLLMQANYIDGS--SEQ--AIGRLLIALNVLLL 756
[Close]
BLAST of jgi.p|Trimin1|167547 vs. uniprot
Match: A0A835ZLE8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZLE8_9STRA)

HSP 1 Score: 226 bits (576), Expect = 8.130e-63
Identity = 147/348 (42.24%), Postives = 187/348 (53.74%), Query Frame = 1 
Query:   16 GSAHNAGAA--------LRNAVCALLAALRIPLVVYQIQTQFASITGALLPQAYHTFLNWLNAVGFDLRWVLPLGCAADLNFYQRLLVATLAPLGVGTLLFTPRVIAALLPRELPSGRLAARIRAKAARLAAADLKLFLVFTFVIFSGVSAIVLQTFACETLKGTGLRYLRADYSIRCQTSEHSAYMVYAGFMILVYPIGIQPFMPGCCGSTVSMQKYCSTPAARARTLQSSLQAYYQRADYWECVECVRRISLTGLLVFIAPGTSSQYVAACALSFGAIVVYELVQPHRLRADTCLYTLGGVITWGVTFLAALTGGPAAAANVDGNALSERGAAAGVVLIALNVCCL 1035
            G++ NAG A        +   V  L+  LR+P+VV Q+ TQ+ SITGA LP +Y  FLN ++ V  DLRWV   GCA  ++FY RLL+ATL PL V  L+F PR+    L     S R   +  A   RL   D    L FTF+IF+GVS  V QTFAC+ L      YLRADYSI C T EH+AY ++AG M+L+YPIGI               +     +  A+      + Y   A +WE VEC+RR+ LTGLLVFI PGT  Q   AC  +F    VYE V+PH  R+D  LY LG  I +   FL+ L       +  D     +  A  G +LIALNV  L
Sbjct:  658 GASENAGGAKPTDIRSRVARIVLELMRRLRVPIVVLQVLTQYVSITGASLPLSYTEFLNSMSLVSLDLRWVTSPGCAMKVDFYGRLLMATLTPLAVIALIFVPRLY---LIARARSERTPRQPHALLQRLVEKDRNAALAFTFLIFAGVSVTVFQTFACDELMYISKSYLRADYSIECYTPEHTAYRIFAGVMVLIYPIGIPALYMSTLWRCFGAHRDHGRTSELAKASSFLWEPYRAHAFHWEVVECLRRLMLTGLLVFIMPGTPGQSAVACVFAFFTGFVYESVRPHGERSDMWLYKLGYSIIFVTYFLSLLM----QVSYTD----EQSEAIIGNLLIALNVLLL 994
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|167547 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CAS6_9STRA2.340e-256100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YQE5_9STRA4.690e-15179.72Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A836C6Y5_9STRA1.040e-13868.44Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A835YNB8_9STRA4.910e-6844.84Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A836CBB8_9STRA1.970e-6744.74Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YTX2_9STRA4.790e-6744.72Uncharacterized protein n=2 Tax=Tribonema minus Ta... [more]
A0A836CDQ4_9STRA4.870e-6445.26Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CFC3_9STRA5.840e-6442.90Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZGI9_9STRA9.220e-6444.54Beta_helix domain-containing protein n=1 Tax=Tribo... [more]
A0A835ZLE8_9STRA8.130e-6342.24Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_51contigContig_51:82914..84205 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|167547|e_gw1.51.128.1
Max annot lvl2759|Eukaryota
EggNOG OGs2BFIX@1|root,2S176@2759|Eukaryota
Evalue1.86e-42
Seed ortholog2880.D7FHH1
Hectar predicted targeting categoryother localisation
TranscriptId167869
TrackFilteredModels1
ProteinId167547
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|167547gene_8761Tribonema minus UTEX_B_3156 geneContig_51 82914..84205 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_8761_1exon_8761_1Tribonema minus UTEX_B_3156 exonContig_51 82914..83606 +
exon_8761_2exon_8761_2Tribonema minus UTEX_B_3156 exonContig_51 83822..84205 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_8761CDS_8761Tribonema minus UTEX_B_3156 CDSContig_51 82914..83606 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|167547Trimin1|167547|e_gw1.51.128.1Tribonema minus UTEX_B_3156 polypeptideContig_51 82914..84205 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_8761 ID=mRNA_8761|Name=jgi.p|Trimin1|167547|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1077bp|location=Sequence derived from alignment at Contig_51:82914..84205+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGTCCGAGGCGGCAGGCTCGGCACACAATGCAGGTGCAGCGCTCAGGAA
TGCCGTGTGCGCGCTCCTTGCTGCGCTGCGCATACCGCTCGTGGTCTACC
AGATCCAGACGCAGTTCGCGAGCATCACCGGAGCGCTTCTTCCGCAGGCA
TATCACACGTTCCTCAATTGGCTCAACGCCGTCGGCTTCGATCTGCGCTG
GGTGCTGCCGCTGGGCTGTGCAGCAGATCTGAACTTCTACCAGCGGCTGC
TCGTGGCCACGTTGGCGCCTTTGGGGGTTGGTACATTACTCTTTACGCCG
CGTGTGATCGCCGCATTGCTACCCCGTGAGTTGCCTAGCGGGCGGCTTGC
AGCACGGATCAGAGCGAAGGCGGCACGGTTAGCAGCCGCTGATCTCAAGC
TTTTCTTGGTGTTTACATTCGTTATATTTTCAGGCGTCTCGGCGATTGTC
CTGCAGACTTTTGCGTGCGAAACACTGAAGGGAACAGGGCTTAGATATCT
TAGGGCAGACTACAGTATAAGATGTCAGACGTCCGAGCATAGCGCGTATA
TGGTGTACGCAGGGTTCATGATACTGGTATATCCGATTGGCATACAGCCC
TTTATGCCTGGGTGCTGCGGCAGCACCGTAAGCATGCAGAAATACTGCAG
CACACCAGCAGCAAGAGCGAGAACGCTACAATCCAGCTTGCAAGCATACT
ACCAGCGTGCTGACTATTGGGAGTGCGTGGAGTGCGTCCGCCGCATCTCG
CTCACCGGCCTGCTCGTCTTCATCGCACCAGGGACGTCATCACAGTATGT
GGCGGCTTGCGCCCTGTCCTTCGGTGCCATCGTCGTCTATGAGCTGGTGC
AGCCACACCGCTTGCGCGCTGACACGTGTCTGTACACGCTGGGCGGCGTC
ATCACATGGGGCGTCACATTCCTCGCGGCCCTCACAGGGGGGCCTGCGGC
AGCGGCCAATGTGGACGGCAATGCTTTGAGTGAGCGCGGCGCAGCCGCTG
GAGTCGTGCTCATTGCGCTGAATGTGTGCTGCTTGTGCTGGCGCTGGCCA
TGGCACTTGTTGTGGGGCAAAAAGTGA
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protein sequence of jgi.p|Trimin1|167547

>Trimin1|167547|e_gw1.51.128.1 ID=Trimin1|167547|e_gw1.51.128.1|Name=jgi.p|Trimin1|167547|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=359bp
MSEAAGSAHNAGAALRNAVCALLAALRIPLVVYQIQTQFASITGALLPQA
YHTFLNWLNAVGFDLRWVLPLGCAADLNFYQRLLVATLAPLGVGTLLFTP
RVIAALLPRELPSGRLAARIRAKAARLAAADLKLFLVFTFVIFSGVSAIV
LQTFACETLKGTGLRYLRADYSIRCQTSEHSAYMVYAGFMILVYPIGIQP
FMPGCCGSTVSMQKYCSTPAARARTLQSSLQAYYQRADYWECVECVRRIS
LTGLLVFIAPGTSSQYVAACALSFGAIVVYELVQPHRLRADTCLYTLGGV
ITWGVTFLAALTGGPAAAANVDGNALSERGAAAGVVLIALNVCCLCWRWP
WHLLWGKK*
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mRNA from alignment at Contig_51:82914..84205+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_8761 ID=mRNA_8761|Name=jgi.p|Trimin1|167547|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1292bp|location=Sequence derived from alignment at Contig_51:82914..84205+ (Tribonema minus UTEX_B_3156 )
ATGTCCGAGGCGGCAGGCTCGGCACACAATGCAGGTGCAGCGCTCAGGAA
TGCCGTGTGCGCGCTCCTTGCTGCGCTGCGCATACCGCTCGTGGTCTACC
AGATCCAGACGCAGTTCGCGAGCATCACCGGAGCGCTTCTTCCGCAGGCA
TATCACACGTTCCTCAATTGGCTCAACGCCGTCGGCTTCGATCTGCGCTG
GGTGCTGCCGCTGGGCTGTGCAGCAGATCTGAACTTCTACCAGCGGCTGC
TCGTGGCCACGTTGGCGCCTTTGGGGGTTGGTACATTACTCTTTACGCCG
CGTGTGATCGCCGCATTGCTACCCCGTGAGTTGCCTAGCGGGCGGCTTGC
AGCACGGATCAGAGCGAAGGCGGCACGGTTAGCAGCCGCTGATCTCAAGC
TTTTCTTGGTGTTTACATTCGTTATATTTTCAGGCGTCTCGGCGATTGTC
CTGCAGACTTTTGCGTGCGAAACACTGAAGGGAACAGGGCTTAGATATCT
TAGGGCAGACTACAGTATAAGATGTCAGACGTCCGAGCATAGCGCGTATA
TGGTGTACGCAGGGTTCATGATACTGGTATATCCGATTGGCATACAGCCC
TTTATGCCTGGGTGCTGCGGCAGCACCGTAAGCATGCAGAAATACTGCAG
CACACCAGCAGCAAGAGCGAGAACGCTACAATCCAGCTTGCAAGTGCAGA
AATGCGAGAGAGAGCTGCCATAGCAGCAGCGGCTGACCAGCAGGCTGCAG
CACTGGCAGCAGAGGAATCAGGGAATGCAAGAGTATCCACCTTCAACTTT
GCTCGTCTTACAACGATCGCAGCCCTGCCAACGGCAGCCACACATGCCTC
GCCGGAAATGGTTTCGGCCGAATCGCCTTTGTCGCGCGCATCCGCGTTCC
TGCGCAAGGCATACTACCAGCGTGCTGACTATTGGGAGTGCGTGGAGTGC
GTCCGCCGCATCTCGCTCACCGGCCTGCTCGTCTTCATCGCACCAGGGAC
GTCATCACAGTATGTGGCGGCTTGCGCCCTGTCCTTCGGTGCCATCGTCG
TCTATGAGCTGGTGCAGCCACACCGCTTGCGCGCTGACACGTGTCTGTAC
ACGCTGGGCGGCGTCATCACATGGGGCGTCACATTCCTCGCGGCCCTCAC
AGGGGGGCCTGCGGCAGCGGCCAATGTGGACGGCAATGCTTTGAGTGAGC
GCGGCGCAGCCGCTGGAGTCGTGCTCATTGCGCTGAATGTGTGCTGCTTG
TGCTGGCGCTGGCCATGGCACTTGTTGTGGGGCAAAAAGTGA
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Coding sequence (CDS) from alignment at Contig_51:82914..84205+

>mRNA_8761 ID=mRNA_8761|Name=jgi.p|Trimin1|167547|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1077bp|location=Sequence derived from alignment at Contig_51:82914..84205+ (Tribonema minus UTEX_B_3156 )
ATGTCCGAGGCGGCAGGCTCGGCACACAATGCAGGTGCAGCGCTCAGGAA
TGCCGTGTGCGCGCTCCTTGCTGCGCTGCGCATACCGCTCGTGGTCTACC
AGATCCAGACGCAGTTCGCGAGCATCACCGGAGCGCTTCTTCCGCAGGCA
TATCACACGTTCCTCAATTGGCTCAACGCCGTCGGCTTCGATCTGCGCTG
GGTGCTGCCGCTGGGCTGTGCAGCAGATCTGAACTTCTACCAGCGGCTGC
TCGTGGCCACGTTGGCGCCTTTGGGGGTTGGTACATTACTCTTTACGCCG
CGTGTGATCGCCGCATTGCTACCCCGTGAGTTGCCTAGCGGGCGGCTTGC
AGCACGGATCAGAGCGAAGGCGGCACGGTTAGCAGCCGCTGATCTCAAGC
TTTTCTTGGTGTTTACATTCGTTATATTTTCAGGCGTCTCGGCGATTGTC
CTGCAGACTTTTGCGTGCGAAACACTGAAGGGAACAGGGCTTAGATATCT
TAGGGCAGACTACAGTATAAGATGTCAGACGTCCGAGCATAGCGCGTATA
TGGTGTACGCAGGGTTCATGATACTGGTATATCCGATTGGCATACAGCCC
TTTATGCCTGGGTGCTGCGGCAGCACCGTAAGCATGCAGAAATACTGCAG
CACACCAGCAGCAAGAGCGAGAACGCTACAATCCAGCTTGCAAGCATACT
ACCAGCGTGCTGACTATTGGGAGTGCGTGGAGTGCGTCCGCCGCATCTCG
CTCACCGGCCTGCTCGTCTTCATCGCACCAGGGACGTCATCACAGTATGT
GGCGGCTTGCGCCCTGTCCTTCGGTGCCATCGTCGTCTATGAGCTGGTGC
AGCCACACCGCTTGCGCGCTGACACGTGTCTGTACACGCTGGGCGGCGTC
ATCACATGGGGCGTCACATTCCTCGCGGCCCTCACAGGGGGGCCTGCGGC
AGCGGCCAATGTGGACGGCAATGCTTTGAGTGAGCGCGGCGCAGCCGCTG
GAGTCGTGCTCATTGCGCTGAATGTGTGCTGCTTGTGCTGGCGCTGGCCA
TGGCACTTGTTGTGGGGCAAAAAGTGA
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