mRNA_8742 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|169003
Unique NamemRNA_8742
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
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BLAST of jgi.p|Trimin1|169003 vs. uniprot
Match: A0A835YNF1_9STRA (Phosphoenolpyruvate carboxykinase (ATP) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNF1_9STRA)

HSP 1 Score: 1113 bits (2879), Expect = 0.000e+0
Identity = 541/541 (100.00%), Postives = 541/541 (100.00%), Query Frame = 1 
Query:    1 MHASTISSSSVGIDKATGISKPAFYRNLPYPDIYEHEVANKEGVTASNGAFVVTTGKFTGRSPKDKFFVQQAPSDKNLDWGKVNMPVSLQVYKDVYQRSVDHYNKNVSKAYVFDGFCGTNPKSRKAVRIITELAWQHHFVTNMFIRPTSPEEIKDFKPDFTIINACKVTNPDWKEKKLNSDVAAIFNVEDRMAVITGTWYGGEMKKGVFSMMNYWLPLEGIMAMHCSANKASHQSLIGKGGDTALFFGLSGTGKTTLSADPNRFLIGDDEHGWDDDGIFNFEGGCYAKTIKLRRENEPEIFDAIKRDALLENVKILENGDVDYDDKTITENGRVSYPIYHIANYEPTGMGGHPANVIFLTCDAFGVLPPVSRLSEGQAMYHFLSGYTAKVAGTERGITEPVPNFSACFGAAFMTLHPTKYADLLKQKLQKHNTKCYLVNTGWTGGAYGVGERMSIKATRACIDAILDGSIDSAPTVSDPVFGFDIPTKLKDVPASVLDPKQSWKDKDAYEAARSKLAGMFKKNYEQFRKPGMTDYASFGPK 1623
            MHASTISSSSVGIDKATGISKPAFYRNLPYPDIYEHEVANKEGVTASNGAFVVTTGKFTGRSPKDKFFVQQAPSDKNLDWGKVNMPVSLQVYKDVYQRSVDHYNKNVSKAYVFDGFCGTNPKSRKAVRIITELAWQHHFVTNMFIRPTSPEEIKDFKPDFTIINACKVTNPDWKEKKLNSDVAAIFNVEDRMAVITGTWYGGEMKKGVFSMMNYWLPLEGIMAMHCSANKASHQSLIGKGGDTALFFGLSGTGKTTLSADPNRFLIGDDEHGWDDDGIFNFEGGCYAKTIKLRRENEPEIFDAIKRDALLENVKILENGDVDYDDKTITENGRVSYPIYHIANYEPTGMGGHPANVIFLTCDAFGVLPPVSRLSEGQAMYHFLSGYTAKVAGTERGITEPVPNFSACFGAAFMTLHPTKYADLLKQKLQKHNTKCYLVNTGWTGGAYGVGERMSIKATRACIDAILDGSIDSAPTVSDPVFGFDIPTKLKDVPASVLDPKQSWKDKDAYEAARSKLAGMFKKNYEQFRKPGMTDYASFGPK
Sbjct:    1 MHASTISSSSVGIDKATGISKPAFYRNLPYPDIYEHEVANKEGVTASNGAFVVTTGKFTGRSPKDKFFVQQAPSDKNLDWGKVNMPVSLQVYKDVYQRSVDHYNKNVSKAYVFDGFCGTNPKSRKAVRIITELAWQHHFVTNMFIRPTSPEEIKDFKPDFTIINACKVTNPDWKEKKLNSDVAAIFNVEDRMAVITGTWYGGEMKKGVFSMMNYWLPLEGIMAMHCSANKASHQSLIGKGGDTALFFGLSGTGKTTLSADPNRFLIGDDEHGWDDDGIFNFEGGCYAKTIKLRRENEPEIFDAIKRDALLENVKILENGDVDYDDKTITENGRVSYPIYHIANYEPTGMGGHPANVIFLTCDAFGVLPPVSRLSEGQAMYHFLSGYTAKVAGTERGITEPVPNFSACFGAAFMTLHPTKYADLLKQKLQKHNTKCYLVNTGWTGGAYGVGERMSIKATRACIDAILDGSIDSAPTVSDPVFGFDIPTKLKDVPASVLDPKQSWKDKDAYEAARSKLAGMFKKNYEQFRKPGMTDYASFGPK 541
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BLAST of jgi.p|Trimin1|169003 vs. uniprot
Match: A0A097IUF2_9PHAE (Phosphoenolpyruvate carboxykinase (ATP) n=1 Tax=Desmarestia viridis TaxID=62313 RepID=A0A097IUF2_9PHAE)

HSP 1 Score: 841 bits (2173), Expect = 1.170e-303
Identity = 395/534 (73.97%), Postives = 457/534 (85.58%), Query Frame = 1 
Query:   25 SSVGIDKATGISKPA-FYRNLPYPDIYEHEVANKEGVTASNGAFVVTTGKFTGRSPKDKFFVQQAPSDKNLDWGKVNMPVSLQVYKDVYQRSVDHYNKNVSKAYVFDGFCGTNPKSRKAVRIITELAWQHHFVTNMFIRPTSPEEIKDFKPDFTIINACKVTNPDWKEKKLNSDVAAIFNVEDRMAVITGTWYGGEMKKGVFSMMNYWLPLEGIMAMHCSANKASHQSLIGKGGDTALFFGLSGTGKTTLSADPNRFLIGDDEHGWDDDGIFNFEGGCYAKTIKLRRENEPEIFDAIKRDALLENVKILENGDVDYDDKTITENGRVSYPIYHIANYEPTGMGGHPANVIFLTCDAFGVLPPVSRLSEGQAMYHFLSGYTAKVAGTERGITEPVPNFSACFGAAFMTLHPTKYADLLKQKLQKHNTKCYLVNTGWTGGAYGVGERMSIKATRACIDAILDGSIDSAPTVSDPVFGFDIPTKLKDVPASVLDPKQSWKDKDAYEAARSKLAGMFKKNYEQFRKPGMTDYASFGPK 1623
            SS+GIDKATGI+KP   YRNLPYP+++EHE  NKEG    NG + V+TG+FTGRSPKDK+FVQQAPSDKNLDWGKVN+ V+ +VYK++Y ++V HYN NV K YVFDG+CGT+PKSRK VRIITELAWQHHF  NMFIRP S  E+ DFKPDFTIINACKV N D+KE  LNSDVA +FNVE+  AVITGTWYGGEMKKG+FSMMNYWLPL G+MAMHCSANK       GK GDTALFFGLSGTGKTTLSADP R+LIGDDEHGWDDDGIFNFEGGCYAKT+ L  ENEPEI+DAIKRDALLENV I +NG+ DY D + TEN RVSYPIYHI NYEP+GMGGHP ++IFLTCDAFGVLPPVSRLS GQAMYHFLSGYTAKVAGTERG+TEP PNFSA FGAAF+TLHPT YADLL++KL  H T+C+L+NTGWTGG YGVG+RMSIKATRAC+D++LDGSI++    SD VFGF++PT+L  VP+ VL+P+++W DK  Y+A ++KLAGMFK+N+ +F KPG+TDY +FGPK
Sbjct:   45 SSLGIDKATGITKPTTVYRNLPYPEVFEHETKNKEGEVTKNGTYCVSTGQFTGRSPKDKYFVQQAPSDKNLDWGKVNVGVAPEVYKNIYAKAVKHYNDNVDKMYVFDGYCGTSPKSRKNVRIITELAWQHHFAKNMFIRPESEAEVADFKPDFTIINACKVVNDDYKELGLNSDVAVVFNVEENKAVITGTWYGGEMKKGIFSMMNYWLPLNGVMAMHCSANK-------GKNGDTALFFGLSGTGKTTLSADPARYLIGDDEHGWDDDGIFNFEGGCYAKTVNLSHENEPEIYDAIKRDALLENVIIKDNGEPDYADVSRTENTRVSYPIYHIDNYEPSGMGGHPNSIIFLTCDAFGVLPPVSRLSAGQAMYHFLSGYTAKVAGTERGVTEPTPNFSAGFGAAFLTLHPTMYADLLQKKLATHGTQCFLINTGWTGGGYGVGKRMSIKATRACVDSVLDGSINNTKFFSDKVFGFEVPTELPGVPSKVLNPREAWSDKAGYDATQTKLAGMFKQNFTKFVKPGVTDYTAFGPK 571
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BLAST of jgi.p|Trimin1|169003 vs. uniprot
Match: A0A097IUF6_9PHAE (Phosphoenolpyruvate carboxykinase (ATP) n=1 Tax=Punctaria latifolia TaxID=90013 RepID=A0A097IUF6_9PHAE)

HSP 1 Score: 839 bits (2168), Expect = 5.420e-303
Identity = 394/540 (72.96%), Postives = 461/540 (85.37%), Query Frame = 1 
Query:    7 ASTISSSSVGIDKATGISKPA-FYRNLPYPDIYEHEVANKEGVTASNGAFVVTTGKFTGRSPKDKFFVQQAPSDKNLDWGKVNMPVSLQVYKDVYQRSVDHYNKNVSKAYVFDGFCGTNPKSRKAVRIITELAWQHHFVTNMFIRPTSPEEIKDFKPDFTIINACKVTNPDWKEKKLNSDVAAIFNVEDRMAVITGTWYGGEMKKGVFSMMNYWLPLEGIMAMHCSANKASHQSLIGKGGDTALFFGLSGTGKTTLSADPNRFLIGDDEHGWDDDGIFNFEGGCYAKTIKLRRENEPEIFDAIKRDALLENVKILENGDVDYDDKTITENGRVSYPIYHIANYEPTGMGGHPANVIFLTCDAFGVLPPVSRLSEGQAMYHFLSGYTAKVAGTERGITEPVPNFSACFGAAFMTLHPTKYADLLKQKLQKHNTKCYLVNTGWTGGAYGVGERMSIKATRACIDAILDGSIDSAPTVSDPVFGFDIPTKLKDVPASVLDPKQSWKDKDAYEAARSKLAGMFKKNYEQFRKPGMTDYASFGPK 1623
            AS  + SS+GIDKATGI+KP+  Y NLPYP ++EHE  NKEG T +NG + V+TG+FTGRSPKDK+FVQQAPSD+ LDWGK+N+ V+ +V++++Y+++V HYN+NV K YVFDG+CGT+PKSRK VRIITELAWQHHF  NMFIRP +  E + FKPDFTIINACKV N D+KE  LNS+VA +FNVE+R AVITGTWYGGEMKKG+FSMMNYWLPL G+MAMHCSANK       GK GDTALFFGLSGTGKTTLSADP+R LIGDDEHGWD+DGIFNFEGGCYAKT+ L  E EPEIFDAIKRDALLENV I ENG+ DY D + TEN RVSYPIYHI N+EPTGMGGHP +VIFLTCDAFG+LPPVSRLS GQAMYHFLSGYTAKVAGTERG+TEPVPNFSACFGAAFMTLHPTKYADLL++KL KH T+C+L+NTGWTGG YGVG+RMS+KATRAC+ A+LDG+I +     DPVFGF++P ++  VP  VLDP+ +W DKD Y+A R+KLAGMFK+N+ +F KPG+TDY S+GPK
Sbjct:   33 ASLATVSSLGIDKATGITKPSTVYHNLPYPQVFEHETKNKEGETTANGTYCVSTGQFTGRSPKDKYFVQQAPSDETLDWGKINVGVAPKVWENIYKKAVKHYNENVEKMYVFDGYCGTSPKSRKNVRIITELAWQHHFAKNMFIRPDTEAETEGFKPDFTIINACKVVNDDYKELGLNSEVAVVFNVEERKAVITGTWYGGEMKKGIFSMMNYWLPLNGVMAMHCSANK-------GKNGDTALFFGLSGTGKTTLSADPDRKLIGDDEHGWDNDGIFNFEGGCYAKTVNLSHETEPEIFDAIKRDALLENVVIKENGEPDYTDVSKTENTRVSYPIYHIDNFEPTGMGGHPNSVIFLTCDAFGILPPVSRLSAGQAMYHFLSGYTAKVAGTERGVTEPVPNFSACFGAAFMTLHPTKYADLLQKKLAKHGTQCFLINTGWTGGGYGVGKRMSLKATRACVHAVLDGTIHNTSFTPDPVFGFEVPAEVPGVPDKVLDPRDAWSDKDGYDATRTKLAGMFKENFTKFVKPGVTDYTSYGPK 565
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BLAST of jgi.p|Trimin1|169003 vs. uniprot
Match: D7FYY3_ECTSI (Phosphoenolpyruvate carboxykinase (ATP) n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYY3_ECTSI)

HSP 1 Score: 835 bits (2157), Expect = 3.840e-301
Identity = 394/540 (72.96%), Postives = 456/540 (84.44%), Query Frame = 1 
Query:    7 ASTISSSSVGIDKATGISKPA-FYRNLPYPDIYEHEVANKEGVTASNGAFVVTTGKFTGRSPKDKFFVQQAPSDKNLDWGKVNMPVSLQVYKDVYQRSVDHYNKNVSKAYVFDGFCGTNPKSRKAVRIITELAWQHHFVTNMFIRPTSPEEIKDFKPDFTIINACKVTNPDWKEKKLNSDVAAIFNVEDRMAVITGTWYGGEMKKGVFSMMNYWLPLEGIMAMHCSANKASHQSLIGKGGDTALFFGLSGTGKTTLSADPNRFLIGDDEHGWDDDGIFNFEGGCYAKTIKLRRENEPEIFDAIKRDALLENVKILENGDVDYDDKTITENGRVSYPIYHIANYEPTGMGGHPANVIFLTCDAFGVLPPVSRLSEGQAMYHFLSGYTAKVAGTERGITEPVPNFSACFGAAFMTLHPTKYADLLKQKLQKHNTKCYLVNTGWTGGAYGVGERMSIKATRACIDAILDGSIDSAPTVSDPVFGFDIPTKLKDVPASVLDPKQSWKDKDAYEAARSKLAGMFKKNYEQFRKPGMTDYASFGPK 1623
            AS  + SS+GIDKATGI+KP+  + NLPYP ++EHE  NKEG + +NG F V+TG+FTGRSPKDK+FVQQAPSDK LDWGK+N+ V+ +V++++Y ++V HYN NV   YVFDG+CGT+PKSRK VRIITELAWQHHF  NMFIRP +  E   FKPDFTIINACKV N D+KE  LNS+VA +FNVE+R AVITGTWYGGEMKKG+FSMMNYWLPL+G+MAMHCSANK       GK GDTALFFGLSGTGKTTLSADP R+LIGDDEHGWDDDGIFNFEGGCYAKTI L  ENEPEI+DAIKRDALLENV I +NG+ DY D + TEN RVSYPIYHI NYEP+GMGGHP +VIFLTCDAFG+LPPVSRLS GQAMYHFLSGYTAKVAGTERG+TEP PNFSA FGAAF+TLHPT YADLL++KL KH T+CYL+NTGWTGG YGVG+RMSIKATRAC+DA+LDGSI       DPVFGF++P +L  VPA VL+P+++W DK  Y+A R+KLAGMFK N+ +F KPG+TDY S+GPK
Sbjct:   44 ASLATVSSLGIDKATGITKPSTVHHNLPYPQVFEHETKNKEGESTANGTFCVSTGQFTGRSPKDKYFVQQAPSDKTLDWGKINVGVAPKVFENIYNKAVKHYNDNVDSMYVFDGYCGTSPKSRKNVRIITELAWQHHFAKNMFIRPETEAETAGFKPDFTIINACKVVNDDYKELGLNSEVAVVFNVEERKAVITGTWYGGEMKKGIFSMMNYWLPLDGVMAMHCSANK-------GKNGDTALFFGLSGTGKTTLSADPERYLIGDDEHGWDDDGIFNFEGGCYAKTINLSHENEPEIYDAIKRDALLENVVIKDNGEPDYTDVSKTENTRVSYPIYHIDNYEPSGMGGHPNSVIFLTCDAFGILPPVSRLSAGQAMYHFLSGYTAKVAGTERGVTEPTPNFSAGFGAAFLTLHPTMYADLLQKKLAKHGTQCYLINTGWTGGGYGVGKRMSIKATRACVDAVLDGSIGKTTFTPDPVFGFEVPAELPGVPAKVLNPREAWSDKKGYDATRTKLAGMFKDNFTKFVKPGVTDYTSYGPK 576
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BLAST of jgi.p|Trimin1|169003 vs. uniprot
Match: A0A0A0V7J9_SACJA (Phosphoenolpyruvate carboxykinase (ATP) n=4 Tax=Laminariales TaxID=2886 RepID=A0A0A0V7J9_SACJA)

HSP 1 Score: 835 bits (2157), Expect = 3.990e-301
Identity = 389/534 (72.85%), Postives = 456/534 (85.39%), Query Frame = 1 
Query:   25 SSVGIDKATGISKPA-FYRNLPYPDIYEHEVANKEGVTASNGAFVVTTGKFTGRSPKDKFFVQQAPSDKNLDWGKVNMPVSLQVYKDVYQRSVDHYNKNVSKAYVFDGFCGTNPKSRKAVRIITELAWQHHFVTNMFIRPTSPEEIKDFKPDFTIINACKVTNPDWKEKKLNSDVAAIFNVEDRMAVITGTWYGGEMKKGVFSMMNYWLPLEGIMAMHCSANKASHQSLIGKGGDTALFFGLSGTGKTTLSADPNRFLIGDDEHGWDDDGIFNFEGGCYAKTIKLRRENEPEIFDAIKRDALLENVKILENGDVDYDDKTITENGRVSYPIYHIANYEPTGMGGHPANVIFLTCDAFGVLPPVSRLSEGQAMYHFLSGYTAKVAGTERGITEPVPNFSACFGAAFMTLHPTKYADLLKQKLQKHNTKCYLVNTGWTGGAYGVGERMSIKATRACIDAILDGSIDSAPTVSDPVFGFDIPTKLKDVPASVLDPKQSWKDKDAYEAARSKLAGMFKKNYEQFRKPGMTDYASFGPK 1623
            SS+GIDKATGI  P   +RNLPYP+++EHEV +KEG   SNG F V+TG+FTGRSPKDK+FV+QAPSDKNLDWGKVN+ V+  V+K++Y+++V HYN NV K YVFDG+CGT+PKSRK VRIITELAWQHHF  NMFIRP S  E+ DF PDFTIINACKV N D+KE  LNS+VA +FNVE+R AVITGTWYGGEMKKG+FSMMNYWLPL+G+MAMHCSANK       GK GDTALFFGLSGTGKTTLSADP+R+LIGDDEHGWDDDGIFNFEGGCYAKTI L  ENEPEI+DAIK+DALLENV I  NGD DY D + TEN RVSYPIYHI NYEP+GMGGHP +++FLTCDAFGVLPPVSRLS GQAMYHFLSGYTAKVAGTERG+TEP PNFSACFGAAF+TLHPT YADLL++KL  H T+C+L+NTGWTGG YGVG+RMSIKATRAC++++LDGSI+     +DPVFGF++P  L  VP+ VL+P+ +W DK++Y+  R+KLAGMFK N+ +F KPG+T+Y ++GPK
Sbjct:   51 SSLGIDKATGIKNPTTVHRNLPYPEVFEHEVKHKEGEVTSNGTFCVSTGQFTGRSPKDKYFVKQAPSDKNLDWGKVNVGVAPDVFKNIYKKAVKHYNDNVEKMYVFDGYCGTSPKSRKNVRIITELAWQHHFAKNMFIRPESEAEVADFAPDFTIINACKVVNDDYKELGLNSEVAVVFNVEERKAVITGTWYGGEMKKGIFSMMNYWLPLDGVMAMHCSANK-------GKNGDTALFFGLSGTGKTTLSADPDRYLIGDDEHGWDDDGIFNFEGGCYAKTINLSHENEPEIYDAIKKDALLENVIIKGNGDPDYTDVSKTENTRVSYPIYHIDNYEPSGMGGHPNSIVFLTCDAFGVLPPVSRLSAGQAMYHFLSGYTAKVAGTERGVTEPTPNFSACFGAAFLTLHPTAYADLLQKKLDTHGTQCFLINTGWTGGGYGVGKRMSIKATRACVNSVLDGSINKTKFTADPVFGFEVPADLPGVPSKVLNPRDAWSDKESYDTTRTKLAGMFKDNFTKFVKPGVTNYTAYGPK 577
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BLAST of jgi.p|Trimin1|169003 vs. uniprot
Match: A0A097IUG4_PETFA (Phosphoenolpyruvate carboxykinase (ATP) n=1 Tax=Petalonia fascia TaxID=2893 RepID=A0A097IUG4_PETFA)

HSP 1 Score: 831 bits (2146), Expect = 1.450e-299
Identity = 392/540 (72.59%), Postives = 458/540 (84.81%), Query Frame = 1 
Query:    7 ASTISSSSVGIDKATGISKPA-FYRNLPYPDIYEHEVANKEGVTASNGAFVVTTGKFTGRSPKDKFFVQQAPSDKNLDWGKVNMPVSLQVYKDVYQRSVDHYNKNVSKAYVFDGFCGTNPKSRKAVRIITELAWQHHFVTNMFIRPTSPEEIKDFKPDFTIINACKVTNPDWKEKKLNSDVAAIFNVEDRMAVITGTWYGGEMKKGVFSMMNYWLPLEGIMAMHCSANKASHQSLIGKGGDTALFFGLSGTGKTTLSADPNRFLIGDDEHGWDDDGIFNFEGGCYAKTIKLRRENEPEIFDAIKRDALLENVKILENGDVDYDDKTITENGRVSYPIYHIANYEPTGMGGHPANVIFLTCDAFGVLPPVSRLSEGQAMYHFLSGYTAKVAGTERGITEPVPNFSACFGAAFMTLHPTKYADLLKQKLQKHNTKCYLVNTGWTGGAYGVGERMSIKATRACIDAILDGSIDSAPTVSDPVFGFDIPTKLKDVPASVLDPKQSWKDKDAYEAARSKLAGMFKKNYEQFRKPGMTDYASFGPK 1623
            AS  + SS+GIDKATGI+KP+  Y NLPYP+++EHE  N+EG + +NG + V+TG+FTGRSPKDK+FV+QAPSDK LDWGK+N  V+ +VY+++Y+++V HYN+NV K YVFDG+CGT+PKSRK VRIITELAWQHHF  NMFIRP S  E   F+PDFTIINACKV N D+K+  LNSDVA +FNVE+ MAVITGTWYGGEMKKG+FSMMNYWLPL+G+MAMHCSANK       GK GDTALFFGLSGTGKTTLSADP R LIGDDEHGWDDDGIFNFEGGCYAKTI L R+NEPEI+DAIKRDALLENV I ENG+ DY D + TEN RVSYPIYHI N+EP+GMGGHP ++IFLTCDAFGVLPPVSRLS GQAMYH+LSGYTAKVAGTERG+TEP PNFSA FGAAF+TLHPT YADLL+ KL +H T+C+L+NTGWTGG YGVG+RMSIKATRAC++A+LDGSI+ A    DPVFGFD+PT+L  VP  VL P+ +W DK +Y+  R+KLAGMFK NY +F KPG+T+Y SFGPK
Sbjct:   38 ASLATVSSLGIDKATGITKPSTVYYNLPYPEVFEHETKNEEGESTANGTYCVSTGQFTGRSPKDKYFVKQAPSDKKLDWGKINKGVAPEVYENIYKKAVKHYNENVDKMYVFDGYCGTSPKSRKNVRIITELAWQHHFAKNMFIRPDSEAETAGFEPDFTIINACKVINEDYKDLGLNSDVAVVFNVEENMAVITGTWYGGEMKKGIFSMMNYWLPLDGVMAMHCSANK-------GKDGDTALFFGLSGTGKTTLSADPERLLIGDDEHGWDDDGIFNFEGGCYAKTINLSRDNEPEIYDAIKRDALLENVIIKENGEPDYTDTSRTENTRVSYPIYHIDNHEPSGMGGHPNSIIFLTCDAFGVLPPVSRLSPGQAMYHYLSGYTAKVAGTERGVTEPTPNFSAGFGAAFLTLHPTLYADLLQHKLDRHGTQCFLINTGWTGGGYGVGKRMSIKATRACVNAVLDGSINKASFTPDPVFGFDVPTELPGVPTKVLIPRDAWSDKKSYDTTRTKLAGMFKDNYTKFVKPGVTNYTSFGPK 570
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BLAST of jgi.p|Trimin1|169003 vs. uniprot
Match: A0A097IUE6_9PHAE (Phosphoenolpyruvate carboxykinase (ATP) n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A097IUE6_9PHAE)

HSP 1 Score: 830 bits (2143), Expect = 3.580e-299
Identity = 388/534 (72.66%), Postives = 458/534 (85.77%), Query Frame = 1 
Query:   25 SSVGIDKATGISKPA-FYRNLPYPDIYEHEVANKEGVTASNGAFVVTTGKFTGRSPKDKFFVQQAPSDKNLDWGKVNMPVSLQVYKDVYQRSVDHYNKNVSKAYVFDGFCGTNPKSRKAVRIITELAWQHHFVTNMFIRPTSPEEIKDFKPDFTIINACKVTNPDWKEKKLNSDVAAIFNVEDRMAVITGTWYGGEMKKGVFSMMNYWLPLEGIMAMHCSANKASHQSLIGKGGDTALFFGLSGTGKTTLSADPNRFLIGDDEHGWDDDGIFNFEGGCYAKTIKLRRENEPEIFDAIKRDALLENVKILENGDVDYDDKTITENGRVSYPIYHIANYEPTGMGGHPANVIFLTCDAFGVLPPVSRLSEGQAMYHFLSGYTAKVAGTERGITEPVPNFSACFGAAFMTLHPTKYADLLKQKLQKHNTKCYLVNTGWTGGAYGVGERMSIKATRACIDAILDGSIDSAPTVSDPVFGFDIPTKLKDVPASVLDPKQSWKDKDAYEAARSKLAGMFKKNYEQFRKPGMTDYASFGPK 1623
            SS+GIDKATGI+KP+  +RNLPYP+++EHE  NKEG    NG F V+TG FTGRSPKDK+FV Q+PS   LDWGK+N+ V+  VYK++Y+++V HYN+NV   YVFDG+CGT+PKSRK VRIITELAWQHHF  NMFIRP S +E+++F PDFTIINACKV N D+KE  LNSDVA IFNVE++MAVITGTWYGGEMKKG+FSMMNYWLPL+GIMAMHCSANK       GKGGDTALFFGLSGTGKTTLSADP+R+LIGDDEHGWDD GIFNFEGGCYAKT+ L ++NEPEI+DAIKRDALLENV I  +G+ DY D + TEN RVSYPIYHI N+EP+GMGGHP ++IFLTCDAFGVLPPVSRLS GQAMYHFLSGYTAKVAGTERG+TEP PNFSACFGAAF+TLHPTKYADLL++KL KH T+C+L+NTGWTGG YGVG+RMSIKATRAC++A+LDGSI+ A   +D VFGF++P +L +VPA VL+P+ +W DK+ Y+  R KLAGMFK N+++F K G TDY+S+GPK
Sbjct:   40 SSLGIDKATGITKPSKVHRNLPYPEVFEHEQKNKEGEVTKNGTFCVSTGAFTGRSPKDKYFVHQSPSCDTLDWGKINVGVAPDVYKNIYEKAVKHYNENVDSMYVFDGYCGTSPKSRKNVRIITELAWQHHFAKNMFIRPDSEKEVENFNPDFTIINACKVLNKDYKELGLNSDVAVIFNVEEKMAVITGTWYGGEMKKGIFSMMNYWLPLDGIMAMHCSANK-------GKGGDTALFFGLSGTGKTTLSADPDRYLIGDDEHGWDDHGIFNFEGGCYAKTVNLSKDNEPEIYDAIKRDALLENVIIKSDGEPDYTDTSRTENTRVSYPIYHIDNHEPSGMGGHPTSIIFLTCDAFGVLPPVSRLSGGQAMYHFLSGYTAKVAGTERGVTEPTPNFSACFGAAFLTLHPTKYADLLQKKLDKHQTQCFLINTGWTGGGYGVGKRMSIKATRACVNAVLDGSINKANFTNDEVFGFEVPAELPEVPAQVLNPRAAWSDKEKYDNTRIKLAGMFKDNFKKFIKEGATDYSSYGPK 566
[Close]
BLAST of jgi.p|Trimin1|169003 vs. uniprot
Match: A0A097IUF8_9PHAE (Phosphoenolpyruvate carboxykinase (ATP) n=3 Tax=Scytosiphonaceae TaxID=2891 RepID=A0A097IUF8_9PHAE)

HSP 1 Score: 822 bits (2122), Expect = 6.760e-296
Identity = 385/540 (71.30%), Postives = 457/540 (84.63%), Query Frame = 1 
Query:    7 ASTISSSSVGIDKATGISKPA-FYRNLPYPDIYEHEVANKEGVTASNGAFVVTTGKFTGRSPKDKFFVQQAPSDKNLDWGKVNMPVSLQVYKDVYQRSVDHYNKNVSKAYVFDGFCGTNPKSRKAVRIITELAWQHHFVTNMFIRPTSPEEIKDFKPDFTIINACKVTNPDWKEKKLNSDVAAIFNVEDRMAVITGTWYGGEMKKGVFSMMNYWLPLEGIMAMHCSANKASHQSLIGKGGDTALFFGLSGTGKTTLSADPNRFLIGDDEHGWDDDGIFNFEGGCYAKTIKLRRENEPEIFDAIKRDALLENVKILENGDVDYDDKTITENGRVSYPIYHIANYEPTGMGGHPANVIFLTCDAFGVLPPVSRLSEGQAMYHFLSGYTAKVAGTERGITEPVPNFSACFGAAFMTLHPTKYADLLKQKLQKHNTKCYLVNTGWTGGAYGVGERMSIKATRACIDAILDGSIDSAPTVSDPVFGFDIPTKLKDVPASVLDPKQSWKDKDAYEAARSKLAGMFKKNYEQFRKPGMTDYASFGPK 1623
            AS  + SS+GIDKATGI+KP+  Y NLPYP+++EHE  N EG + +NG F V+TG+FTGRSPKDK+FVQQAPSD NLDWGK+N  V+ QVY+++Y+++V HYN+NV K YVFDG+CGT+PKSRK VRIITELAWQHHF  NMFIRP S  E   F+PDFTIINACKV N D+KE  LNS+VA +FNVE++ AVIT     GEMKKG+FSMMNYWLPL+G+MAMHCSANK       GK GDTALFFGLSGTGKTTLSADP R+LIGDDEHGWDDDGIFNFEGGCYAKT+ L RENEPEIFDAI+RDALLENV + ENG+ DY D + TEN RVSYPIYHI N+EPTGMGGHP +++FLTCDAFGVLPPVSRLS GQAMYH+LSGYTAKVAGTERG+TEP PNFSA FGAAF+TLHPT+YADLL++KL +H T+C+L+NTGWTGG YGVG+RMS+K TRAC+DA+LDGSI+ A   +DPVFGF++PT+L  V   VL+P+ +W DK++Y+A R++LAGMFK N+ +F KPG+TDY SFGPK
Sbjct:   39 ASLATVSSLGIDKATGITKPSTVYHNLPYPEVFEHETKNNEGESTANGTFCVSTGQFTGRSPKDKYFVQQAPSDTNLDWGKINQGVAPQVYENIYKKAVKHYNENVDKMYVFDGYCGTSPKSRKNVRIITELAWQHHFAKNMFIRPESESETAGFEPDFTIINACKVVNDDYKELGLNSEVAVVFNVEEKKAVITXXXXXGEMKKGIFSMMNYWLPLDGVMAMHCSANK-------GKNGDTALFFGLSGTGKTTLSADPERYLIGDDEHGWDDDGIFNFEGGCYAKTVNLTRENEPEIFDAIRRDALLENVVVKENGEPDYTDVSKTENTRVSYPIYHIENHEPTGMGGHPNSIVFLTCDAFGVLPPVSRLSPGQAMYHYLSGYTAKVAGTERGVTEPTPNFSAGFGAAFLTLHPTEYADLLQKKLDRHGTQCFLINTGWTGGGYGVGKRMSLKETRACVDAVLDGSINKASFHADPVFGFEVPTELPGVTTKVLNPRDAWSDKESYDATRTRLAGMFKDNFTKFVKPGVTDYTSFGPK 571
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BLAST of jgi.p|Trimin1|169003 vs. uniprot
Match: A0A097IUC3_9PHAE (Phosphoenolpyruvate carboxykinase (ATP) n=7 Tax=Sargassum TaxID=3015 RepID=A0A097IUC3_9PHAE)

HSP 1 Score: 811 bits (2096), Expect = 1.420e-291
Identity = 379/534 (70.97%), Postives = 449/534 (84.08%), Query Frame = 1 
Query:   25 SSVGIDKATGISKPA-FYRNLPYPDIYEHEVANKEGVTASNGAFVVTTGKFTGRSPKDKFFVQQAPSDKNLDWGKVNMPVSLQVYKDVYQRSVDHYNKNVSKAYVFDGFCGTNPKSRKAVRIITELAWQHHFVTNMFIRPTSPEEIKDFKPDFTIINACKVTNPDWKEKKLNSDVAAIFNVEDRMAVITGTWYGGEMKKGVFSMMNYWLPLEGIMAMHCSANKASHQSLIGKGGDTALFFGLSGTGKTTLSADPNRFLIGDDEHGWDDDGIFNFEGGCYAKTIKLRRENEPEIFDAIKRDALLENVKILENGDVDYDDKTITENGRVSYPIYHIANYEPTGMGGHPANVIFLTCDAFGVLPPVSRLSEGQAMYHFLSGYTAKVAGTERGITEPVPNFSACFGAAFMTLHPTKYADLLKQKLQKHNTKCYLVNTGWTGGAYGVGERMSIKATRACIDAILDGSIDSAPTVSDPVFGFDIPTKLKDVPASVLDPKQSWKDKDAYEAARSKLAGMFKKNYEQFRKPGMTDYASFGPK 1623
            SS+GIDKATGI+KP   YRNLPYP++++HE  NKEG    NG F V+TG+FTGRSPKDK+FV+QAPS+K LDWGK+N  V+ +VYK++Y ++V HYN NV K YVFDG+CGT+PKSRK VRIITELAWQHHF  NMFIRP + EE+ +F PDFTIINACK+ N D+KE  LNS+VA +FNVE+  AVITGTWYGGEMKKG+FSMMNYWLPL+G+M+MHCSANK       GK GDTALFFGLSGTGKTTLSADP R+LIGDDEHGWD+DGIFNFEGGCYAKT+ L R+NEPEI+DAIKRDALLENV I +NG+ DY D + TEN RVSYPIYHI NYEP+GMG HP +++FLTCDA+GVLPPVSRLS GQAMYHFLSGYTAKVAGTERG+TEP PNFSA FGAAF+TLHPT YADLL++KL KH T+C+L+NTGWTGG YGVG+RMSIKATRAC+DA+LDGSI+      +PVFGF++P +L +VP+ VL+P+++W DK +Y+A R KLA MFK N+ +F KPGMT      PK
Sbjct:   68 SSLGIDKATGITKPTTIYRNLPYPEVFKHEEQNKEGEVTRNGTFCVSTGQFTGRSPKDKYFVEQAPSNKKLDWGKINKGVAPEVYKNIYDKAVKHYNTNVDKMYVFDGYCGTSPKSRKNVRIITELAWQHHFAKNMFIRPETEEEVANFVPDFTIINACKIVNDDYKELGLNSEVAVVFNVEESKAVITGTWYGGEMKKGIFSMMNYWLPLDGVMSMHCSANK-------GKDGDTALFFGLSGTGKTTLSADPARYLIGDDEHGWDEDGIFNFEGGCYAKTVNLSRDNEPEIYDAIKRDALLENVIIKKNGEPDYADVSRTENTRVSYPIYHIDNYEPSGMGDHPKSIVFLTCDAYGVLPPVSRLSPGQAMYHFLSGYTAKVAGTERGVTEPTPNFSAGFGAAFLTLHPTVYADLLQEKLDKHGTQCFLINTGWTGGGYGVGKRMSIKATRACVDAVLDGSINKTQFTKEPVFGFEVPQELPNVPSKVLNPREAWSDKASYDATRVKLADMFKNNFTKFVKPGMTXXXXXXPK 594
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BLAST of jgi.p|Trimin1|169003 vs. uniprot
Match: W7TU57_9STRA (Phosphoenolpyruvate carboxykinase (ATP) n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TU57_9STRA)

HSP 1 Score: 747 bits (1929), Expect = 9.110e-267
Identity = 365/535 (68.22%), Postives = 427/535 (79.81%), Query Frame = 1 
Query:   25 SSVGIDKATGISKPA-FYRNLPYPDIYEHEVANKEGVTASNGAFVVTTGKFTGRSPKDKFFVQQAPSDKNLDWGKVNMPVSLQVYKDVYQRSVDHYNKNVSKAYVFDGFCGTNPKSRKAVRIITELAWQHHFVTNMFIRPTSPEEIKDFKPDFTIINACKVTNPDWKEKKLNSDVAAIFNVEDRMAVITGTWYGGEMKKGVFSMMNYWLPLEGIMAMHCSANKASHQSLIGKGGDTALFFGLSGTGKTTLSADPNRFLIGDDEHGWDDDGIFNFEGGCYAKTIKLRRENEPEIFDAIKRDALLENVKILENGDV-DYDDKTITENGRVSYPIYHIANYEPTGMGGHPANVIFLTCDAFGVLPPVSRLSEGQAMYHFLSGYTAKVAGTERGITEPVPNFSACFGAAFMTLHPTKYADLLKQKLQKHNTKCYLVNTGWTGGAYGVGERMSIKATRACIDAILDGSIDSAPTVSDPVFGFDIPTKLKDVPASVLDPKQSWKDKDAYEAARSKLAGMFKKNYEQFRKPGMTDYASFGPK 1623
            S++G+DK  GI+ P   +RNL YPD+ +HE ANKEG   +NG F V TGKFTGRSPKDK+ V+QAPS+ NL WG VN P+  +V++++Y++ V HYNK + KAY+FDG+CG NP SRK VR +TE AWQ HFVTNMFIRP S +EI+ F PDFTIINAC+V +  WKE  +NS+V   FN+E ++A+I GT+YGGEMKKG+FSMMNYWLPLEGIM MHCSANK       GK GDTALFFGLSGTGKTTLSADP R+LIGDDEHGWDD GIFNFEGGCYAKTI L  ENEP+I+ AIKRDA+LENV I     V DY + + TENGRVSYP++HI NYEPT MG HP  VIFLTCDAFGVLPPV++LS GQAMYHFLSGYTAKVAGTERGITEP   FSACFGAAF+TLHPTKYADLL++KL+KH T  YLVNTGWTGG YGVG+RMSIK TR CIDAILDGSI +A   +DPVFGF +P  L  V + VLDP+ +W DK AY+A R KL  MF+KNY ++  PG+TDY+S GPK
Sbjct:   31 SALGLDKL-GITNPTTIFRNLSYPDLAKHEEANKEGTFVANGTFAVDTGKFTGRSPKDKWIVKQAPSEDNLWWGSVNQPMKGEVFEELYKKCVAHYNK-LDKAYIFDGYCGANPSSRKKVRFLTEQAWQQHFVTNMFIRPQSTKEIEGFAPDFTIINACRVVDEKWKEHGINSEVFVAFNLEKKVAIIGGTFYGGEMKKGIFSMMNYWLPLEGIMPMHCSANK-------GKAGDTALFFGLSGTGKTTLSADPGRYLIGDDEHGWDDHGIFNFEGGCYAKTINLSEENEPDIYRAIKRDAMLENVYIDPTTKVPDYYNTSKTENGRVSYPLHHINNYEPTSMGDHPDKVIFLTCDAFGVLPPVAKLSPGQAMYHFLSGYTAKVAGTERGITEPQATFSACFGAAFLTLHPTKYADLLQKKLEKHGTATYLVNTGWTGGGYGVGKRMSIKNTRTCIDAILDGSIKNASFSTDPVFGFSVPKALHGVASDVLDPRTAWADKAAYDAQRLKLGAMFQKNYTKYVTPGVTDYSSHGPK 556
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|169003 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YNF1_9STRA0.000e+0100.00Phosphoenolpyruvate carboxykinase (ATP) n=1 Tax=Tr... [more]
A0A097IUF2_9PHAE1.170e-30373.97Phosphoenolpyruvate carboxykinase (ATP) n=1 Tax=De... [more]
A0A097IUF6_9PHAE5.420e-30372.96Phosphoenolpyruvate carboxykinase (ATP) n=1 Tax=Pu... [more]
D7FYY3_ECTSI3.840e-30172.96Phosphoenolpyruvate carboxykinase (ATP) n=2 Tax=Ec... [more]
A0A0A0V7J9_SACJA3.990e-30172.85Phosphoenolpyruvate carboxykinase (ATP) n=4 Tax=La... [more]
A0A097IUG4_PETFA1.450e-29972.59Phosphoenolpyruvate carboxykinase (ATP) n=1 Tax=Pe... [more]
A0A097IUE6_9PHAE3.580e-29972.66Phosphoenolpyruvate carboxykinase (ATP) n=1 Tax=Is... [more]
A0A097IUF8_9PHAE6.760e-29671.30Phosphoenolpyruvate carboxykinase (ATP) n=3 Tax=Sc... [more]
A0A097IUC3_9PHAE1.420e-29170.97Phosphoenolpyruvate carboxykinase (ATP) n=7 Tax=Sa... [more]
W7TU57_9STRA9.110e-26768.22Phosphoenolpyruvate carboxykinase (ATP) n=2 Tax=Mo... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_61contigContig_61:681455..688316 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|169003|e_gw1.61.110.1
BRITEko00000,ko00001,ko00002,ko01000
KEGG rclassRC00002,RC02741
KEGG ReactionR00341
KEGG ModuleM00003,M00170
KEGG Pathwayko00010,ko00020,ko00620,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00620,map00710,map01100,map01110,map01120,map01130,map01200
KEGG koko:K01610
EC4.1.1.49
GOsGO:0003674,GO:0003824,GO:0004611,GO:0004612,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006082,GO:0006083,GO:0006094,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0015976,GO:0016051,GO:0016829,GO:0016830,GO:0016831,GO:0016999,GO:0017144,GO:0019318,GO:0019319,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046364,GO:0071704,GO:1901576
Preferred namePCK1
Descriptionphosphoenolpyruvate carboxykinase (ATP) activity
COG categoryC
Max annot lvl2759|Eukaryota
EggNOG OGsCOG1866@1|root,2QQI5@2759|Eukaryota
Evalue6.3e-302
Seed ortholog2880.D7FYY3
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionphosphoenolpyruvate carboxykinase (ATP)
Ec32 orthologEc-19_002930.1
TranscriptId169325
TrackFilteredModels1
ProteinId169003
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|169003gene_8742Tribonema minus UTEX_B_3156 geneContig_61 681455..688316 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|169003Trimin1|169003|e_gw1.61.110.1Tribonema minus UTEX_B_3156 polypeptideContig_61 681455..688316 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_8742_7exon_8742_7Tribonema minus UTEX_B_3156 exonContig_61 681455..681732 -
exon_8742_6exon_8742_6Tribonema minus UTEX_B_3156 exonContig_61 682963..683359 -
exon_8742_5exon_8742_5Tribonema minus UTEX_B_3156 exonContig_61 684712..684951 -
exon_8742_4exon_8742_4Tribonema minus UTEX_B_3156 exonContig_61 686493..686727 -
exon_8742_3exon_8742_3Tribonema minus UTEX_B_3156 exonContig_61 687434..687696 -
exon_8742_2exon_8742_2Tribonema minus UTEX_B_3156 exonContig_61 687917..688063 -
exon_8742_1exon_8742_1Tribonema minus UTEX_B_3156 exonContig_61 688251..688316 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_8742CDS_8742Tribonema minus UTEX_B_3156 CDSContig_61 688251..688316 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_8742 ID=mRNA_8742|Name=jgi.p|Trimin1|169003|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1626bp|location=Sequence derived from alignment at Contig_61:681455..688316- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGCATGCGTCCACCATATCTTCGTCCTCAGTTGGCATAGATAAGGCTAC
TGGGATCAGCAAACCGGCTTTCTACCGGAACCTGCCATATCCCGACATCT
ATGAGCACGAGGTTGCCAACAAGGAGGGAGTTACCGCCTCCAATGGCGCC
TTTGTGGTCACCACTGGAAAGTTCACAGGGCGATCACCCAAGGATAAGTT
TTTCGTTCAGCAGGCTCCCTCCGACAAGAACTTGGACTGGGGCAAGGTGA
ACATGCCCGTGAGCCTCCAGGTGTACAAGGACGTGTACCAGCGCTCCGTT
GACCACTACAACAAGAACGTGAGCAAGGCGTACGTGTTTGACGGCTTCTG
CGGCACCAACCCCAAGTCCCGCAAGGCCGTGCGCATCATCACGGAGCTGG
CGTGGCAACACCACTTCGTGACAAACATGTTCATCCGGCCCACGAGCCCG
GAGGAGATCAAGGACTTCAAGCCAGACTTCACCATCATCAACGCGTGCAA
GGTGACGAACCCCGACTGGAAGGAGAAGAAGCTCAACAGCGATGTCGCAG
CCATCTTCAATGTTGAAGATCGCATGGCGGTGATCACGGGCACGTGGTAC
GGTGGGGAGATGAAGAAGGGCGTGTTCTCAATGATGAACTACTGGCTGCC
GCTGGAGGGCATCATGGCCATGCACTGCTCTGCCAACAAGGCAAGCCACC
AATCACTTATCGGCAAGGGCGGCGACACCGCCCTCTTCTTTGGTCTCTCG
GGCACCGGCAAGACGACCCTGTCCGCCGACCCCAACCGCTTCCTCATTGG
AGACGACGAGCACGGCTGGGACGACGATGGCATCTTCAACTTTGAGGGCG
GCTGCTACGCCAAGACCATCAAGCTGCGCCGCGAGAACGAGCCCGAGATC
TTTGACGCCATCAAGCGCGACGCGCTGCTGGAGAACGTCAAGATCCTGGA
GAACGGCGACGTGGACTACGACGACAAGACCATCACGGAGAACGGCCGCG
TCTCGTACCCCATCTACCACATTGCCAACTACGAGCCCACGGGCATGGGC
GGCCACCCCGCGAATGTCATCTTCCTCACGTGCGACGCCTTTGGCGTGCT
GCCGCCGGTGTCACGGCTCAGCGAGGGCCAGGCCATGTACCACTTCCTGT
CGGGATACACGGCGAAGGTGGCGGGGACAGAGAGGGGGATCACGGAGCCG
GTGCCCAACTTCAGCGCGTGCTTTGGCGCGGCGTTCATGACGCTGCACCC
CACTAAGTACGCGGACCTGCTGAAGCAGAAGCTGCAGAAGCACAACACCA
AGTGCTACCTGGTGAACACGGGCTGGACGGGCGGCGCGTACGGCGTCGGC
GAGCGCATGAGCATCAAGGCGACGCGCGCGTGCATCGACGCCATCCTGGA
CGGCTCCATCGACTCCGCGCCCACGGTCTCCGACCCTGTCTTTGGCTTTG
ACATCCCCACCAAGCTGAAGGACGTGCCCGCGTCAGTGCTCGACCCTAAG
CAGTCCTGGAAGGACAAGGACGCGTACGAGGCTGCCCGCTCCAAGCTCGC
CGGCATGTTCAAGAAGAACTACGAGCAGTTCAGGAAGCCCGGCATGACCG
ACTACGCTTCGTTCGGACCCAAGTAA
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protein sequence of jgi.p|Trimin1|169003

>Trimin1|169003|e_gw1.61.110.1 ID=Trimin1|169003|e_gw1.61.110.1|Name=jgi.p|Trimin1|169003|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=542bp
MHASTISSSSVGIDKATGISKPAFYRNLPYPDIYEHEVANKEGVTASNGA
FVVTTGKFTGRSPKDKFFVQQAPSDKNLDWGKVNMPVSLQVYKDVYQRSV
DHYNKNVSKAYVFDGFCGTNPKSRKAVRIITELAWQHHFVTNMFIRPTSP
EEIKDFKPDFTIINACKVTNPDWKEKKLNSDVAAIFNVEDRMAVITGTWY
GGEMKKGVFSMMNYWLPLEGIMAMHCSANKASHQSLIGKGGDTALFFGLS
GTGKTTLSADPNRFLIGDDEHGWDDDGIFNFEGGCYAKTIKLRRENEPEI
FDAIKRDALLENVKILENGDVDYDDKTITENGRVSYPIYHIANYEPTGMG
GHPANVIFLTCDAFGVLPPVSRLSEGQAMYHFLSGYTAKVAGTERGITEP
VPNFSACFGAAFMTLHPTKYADLLKQKLQKHNTKCYLVNTGWTGGAYGVG
ERMSIKATRACIDAILDGSIDSAPTVSDPVFGFDIPTKLKDVPASVLDPK
QSWKDKDAYEAARSKLAGMFKKNYEQFRKPGMTDYASFGPK*
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mRNA from alignment at Contig_61:681455..688316-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_8742 ID=mRNA_8742|Name=jgi.p|Trimin1|169003|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=6862bp|location=Sequence derived from alignment at Contig_61:681455..688316- (Tribonema minus UTEX_B_3156 )
ATGCATGCGTCCACCATATCTTCGTCCTCAGTTGGCATAGATAAGGCTAC
TGGGATCAGCAAACCGGTAGGTTGCACCTCGCACAACCTCGTTGCACGGT
AGAGAGCTCGGCAATACGATTGCAGGCGCCCTTGCATTGCTTCTGGCAGC
TGCTGATGCTGCGTCGGCGAGCCCACTTCTGTGCTGTTGCCGCACCAAGT
TGAGTTTTGATGGATATATGTGCCACGCGCCACCTGCTTGTCCTCCGTCG
CAGGCTTTCTACCGGAACCTGCCATATCCCGACATCTATGAGCACGAGGT
TGCCAACAAGGAGGGAGTTACCGCCTCCAATGGCGCCTTTGTGGTCACCA
CTGGAAAGTTCACAGGGCGATCACCCAAGGATAAGTTTTTCGTTCAGCAG
GTGCGTTACCGGTAGCTGTCTGAGCGTGCAGCTCTCTGCAACTCTTGCTT
GAGTCGCCTATGTTCATCTTTCCGGTGCCAGAACACAGCAAGCAGCATGC
TAGATGGCAGCAGCTGCGCGCCACCGCAGCTCACAACTGAGAAAATCCTG
GTTGAAGTGCGGCAAACCGGGCTGAACCAGGCGTTCTCACGAGTGCAATC
GCCTGCGCTGCCTGCTGTAGGCTCCCTCCGACAAGAACTTGGACTGGGGC
AAGGTGAACATGCCCGTGAGCCTCCAGGTGTACAAGGACGTGTACCAGCG
CTCCGTTGACCACTACAACAAGAACGTGAGCAAGGCGTACGTGTTTGACG
GCTTCTGCGGCACCAACCCCAAGTCCCGCAAGGCCGTGCGCATCATCACG
GAGCTGGCGTGGCAACACCACTTCGTGACAAACATGTTCATCCGGCCCAC
GAGCCCGGAGGAGATCAAGGACTTCAAGCCAGAGTGAGTTTCGATGGCTT
GGTTTAAGGAGCTGCAGCAAGTTTGGGTCAATTACTACAGTCAGGTTAAT
GTGGCGTGCACACTATTTTTTGTTTAGTCTGGTGGTGTGTCATGAGACTT
GGATAATTTTTCGGCGATTGGTTCATGCAGCAGGCCAATGTTTTTTTTTG
TACTTTTTCCGCCACAGCTTCTGCATTGCGGGGTCAACATGTAGAGCTGC
AGATAGAACAAATCAAATTTTTGATAACTCGCCACCTTTGGTACACGTGC
AAAACGCATGTGCGTTTGCTTATACGCAGTCTGCCAGCCGGCGCGCACGC
ATGGAGCGTGGTCTTGACACATCATGCACGTACAATCGGCAGCTCCGTGA
ATGTGGCGTTTCACAATCATAGTTACTTTTCTTTAATAACGCACAACAAA
TTCAGCAAGTGTGTCTTATGATACCACTTGATACATACATGCAACATAGC
AGCGCATTGCTTTATTGCATTTCACCACCCGCACCTGGTTGGCAGACGCG
CACTACACATATGCAATGCAGTGCAGCTAACAGGAGGACCTCAAGGCACA
GCAGGTCAGATGGCGATGTTGTTTAATGTTCAGAGTCATTGTGCATGCTC
CCTTGCTGTGGATGCTGCTGTAAATTCTTTCTGTGGCGTTGACCATCTCA
AATTCATGTCTGTTTTGACGTGCGCCCGTTTCTGCTCAGCTTCACCATCA
TCAACGCGTGCAAGGTGACGAACCCCGACTGGAAGGAGAAGAAGCTCAAC
AGCGATGTCGCAGCCATCTTCAATGTTGAAGATCGCATGGCGGTGATCAC
GGGCACGTGGTACGGTGGGGAGATGAAGAAGGGCGTGTTCTCAATGATGA
ACTACTGGCTGCCGCTGGAGGGCATCATGGCCATGCACTGCTCTGCCAAC
AAGGCAAGCCACCAATCACTTATCGTACACGTGCTACTAGTGCTGTCGTG
TGCTGCTAAATCCATGCACAACGCTTGAACTCTTTTTGTTCCTAAATAAG
GCATCAATTTCTGCATGGGTTTCGTCATGGGGGATTGCGCTCTAGTTGAG
CGTTCAACTCGCAGATGCAATTAGACAATTTTCATGGTTCAATTTTTTTA
TGCTGCGGGTCCAATTTGGCGGTTCGTCATGTGTCTACTTGGAGGCTTGT
CAATGCGATGCTACTGCCTCAAGCTTTCCATTGCACCGCCCATTGCCGGT
TGAATTGATATCGGCGAATCTGCCATTCCGCCGTGTGCACCTGCCACAAA
GCAGCACTTGTGTGTGTAGCGCAACCCAAGACGCTCTGACAGATGGCACT
GCTGTAGGTTTCCATCAAGCAATGGTCATGAGTAGCGAAAGATATTGCGT
AAGTGCTTCACAAACCAGCCATCCTAGGTGTGTTCTCCTTGTAATCTTCT
AAGGTCTTTTATTTCAAGAGTGGTAGGCGCCACTTGATTGCACTGGTTTC
CGTTTCATGAGATGAACAACAAACAACAATGCGGCGCAGATCGAGTGCTT
GCACATTTCAAGCTTGAAGAATCGACATCTAGGCAAGACACACTGCACGC
TTCATTTATCAATCGTCAAAATCTGCAGGCAGTGGTGTCGAGTAATGGGC
TGCAGGAACAAAGGAGTGCGTAAACTTCCCGTTTTAGTCAGCCTGCAAGC
CACATGCCTGCAGGCCACTTGTCAGGTGTATGAACTTCGCTGAACTAAAT
CGCTTGCCCAGTTATTATGCGGATAGCCAGTCTGCTGCACGCATTCGTGG
CGGGATTAATATGTGTTTTCACCGACATCTATGTAGCTGATGTATATGGT
GGTCTGGAGCGTGACATAGCCAAATTTGTAGCCACATCGTCTTTATAAAA
ACGAATCAAAAGATCGTAGAGCTCTAGTTGACAAGGGATGGTTAGCCGCA
AGTGCCTTCCGCCAATAACCGTGGTCGCCGCTGCTGCAGCAGTTGGCCAC
GAGTCAAACAGTACCACCGTATCCACCAGTCAAAAGACTTTTGTGCGCAA
GCTTTTAGCGTTCGAGGCATATTCTAATGTTGCTGTGAAAACCGATCAGA
TGACGTGTGTACAATGTCATGTACTTTCCATTTGTAAAGCCCGTGGCTCC
TTTTTTTAGTAGAAGTCATGTTATGTGTACTTTAAGTACATGTACTGAGT
CATGTATCCTCGTGTACATGTTGTGTATGAAGTCTGATGTTAACTTCGTG
AGCAGCACGTAATCGTCAGTGCAGTGGATGATTCAGTGTGTCACTTGCTT
CTTCCGAATCCCATGTATTCCACAAGTGCCTTGCATGGGAAGGGCAGTGA
TGCAGCACTTGTGTTGACATACTACGTGTGCGTGCCAGCAGTCAAAAACC
GGAAGTAGCCCATGCAAACATATATCTCCACAATCAAGTGCGACACCACT
ACAGACCTCTTTTACCAACTCCAACATCAACTTTACTCTTCTGCGTCATC
TGTAACTGTGAACAGGGCAAGGGCGGCGACACCGCCCTCTTCTTTGGTCT
CTCGGGCACCGGCAAGACGACCCTGTCCGCCGACCCCAACCGCTTCCTCA
TTGGAGACGACGAGCACGGCTGGGACGACGATGGCATCTTCAACTTTGAG
GGCGGCTGCTACGCCAAGACCATCAAGCTGCGCCGCGAGAACGAGCCCGA
GATCTTTGACGCCATCAAGCGCGACGCGCTGCTGGAGAACGTCAAGATCC
TGGAGGTGAGAGAGCTATGCGCACACTTTGTAGTTGAAAATAGTGGAAAA
GGATGCACTTTGAAGTACCAAACATTATTGGTGGAAGGTATTCAATTTTC
GGCTAACCACACCCTGTCACCTACAGCTCTGTGTTTTTTTTTATTCATTT
TCATCAAGCGCGATGCGCTGCTGGAGAACGTCAAGATCCTGCCGGTGATA
CCATTGTGTACACTTCGAGGGGGCATTTAGTCGAAGTTATATGAAAAAGT
GTCTGGAAAAGATGCACTTTGAAGTAGCAAACATAAAGCGCGACGCGCTG
CTGGAGAACGTGAAGATTGCTGGTGAGAGCTTTGCGCATACATGTCCATG
TGTGTTTCTGATAGAGATGTAGCAGGTATCAATGCACATACATGTGGATA
CGTGTGTTTCTGATATTCCTGCCAGTGAGAGCTTTGCGTATACATGTGCA
TTGTGTGTTTCTGATAGAGATGTAGCAAGTATCAATCCAGTGCTACGCGC
TGCTGAAGAACGTGAAGATCCTGTCGGTGAGACCTCTGTGCATGCAATCG
AAGTAGCACTTGAAGTGTAAGCTGCATGTCGTCAGATGTAGCATCAAACG
CGACATGCTGCTGGAGTACACGGAAGATCGTGCTGGAGCGACCATTGCGC
ATACATGCAGGTGCACCTACAGATTTATCAAGTGTTGTGAAATCAGCTCT
AGTTGAGCGACACACTATGGCGCTGACATGTGTTGATCACGAATCACCGC
TGAAGTGAGCTGTACTTCTTGTTAGTAGTTGGTTGCGTGTTGAGCTGGCC
ATTAGCACTCTGTATACCACCCAGCTGTGCCTAGAACAGCGCTGCGGACT
ACTGCAGCTCTTTTTTGACAGTTGCATATGGTATGTACGACCACTCAGGG
GTGTCCAACAGCAGCGCTGCCGTGTAAACGCTTCTGTATTTGCCCACTTT
GGAACAAAATCTGCAAGCCGGCAACATGGACTACGATGCGACAAGTCCAT
CATCATCAGTGAGAACCGCTTTGCAACTTCTCACCTCGTAACCGCTCACA
CTATAACCACCTCCGCAGAACGGCGACGTAGACCGCTCACCTTGTCACCG
CTTGTGCAGAACGGCGATGTGGACTACAATGACAAATCTAACACCATATA
ACCGCATTTGTAACTGCTCACCTTGACAAGTCCATCATCAGTTACCCGCA
TTGTACATGCTCACTTTGTAACTGTAACTGCTCACCTTCGTAACCGCCCG
TAACCGCTTGCATAGAACGGCGATGTGGACTACGACGACAAGTTCATCAC
GTACAATTGCATTCGTAACTGCTCACCTTGTGACCGCATGTGTAACCGCT
TGCGCAGAACGGCGACGTGGACTACGACGACAAGACCATCACGGAGAACG
GCCGCGTCTCGTACCCCATCTACCACATTGCCAACTACGAGCCCACGGGC
ATGGGCGGCCACCCCGCGAATGTCATCTTCCTCACGTGCGACGCCTTTGG
CGTGCTGCCGCCGGTGTCACGGCTCAGCGAGGGCCAGGCCATGTACCACT
TCCTGTCGGGATACACGGCGAAGGTGGCGGGGACAGAGAGGGGGATCACG
GAGCCGGTGCCCAACTTCAGCGCGTGCTTTGGCGCGGCGTTCATGACGCT
GCACCCCACTAAGTACGCGGACCTGCTGAAGCAGAAGCTGCAGAAGCACA
ACACCAAGTGCTACCTGGTGAACACGGGCTGGACGGGCGGCGCGTACGGC
GTCGGTGAGTGCTTATTTACAGTCCAAAAAGAGTTCATGTATGCACAATG
CATGCAATATACTTGGTATGTACGGCGTTGGTGAGTGCTTGTGTATCGTG
TTTATAGAAGGACTTCATGTATGCACGATATACTTCGACAAAATACAATA
GAAACGGTATCGGTCAGTGCTGATTATGACGCATATGTGCAACATAGGCA
GTTTTTGAGTACAACATGTCGCACCATATATGCACAATAAGCCGTTGGTA
TGTACGGCGTCGGTGAGTGCTTTTTTGTGGCACATGAGGAGTTTATGTTT
GCACGATGTATGCAATATAGTTGCTACGTACGGCGTCAGTGTGTGCTGAT
CTATGGTGCAGAAAGAGTTCATGTATGCACCACATATGCGATATGAATGG
CGTCGGCAAGTGCTGATTGTGGTGCGTAAGGAGTCCATGTATGCACCATA
TATCCAACTAGGGCATTTGATATGTATGGCGTCCGTAAGTGCTTACTCAT
GGTGTAGCTTATGGTGCAGAAGGAGTTCGTGTATACACTGAGAAGGAGTA
TGTGTGTACTGGGACTAGAGCTTGTAGCTTGTACACTTTGTATGCCTTCA
TGCGTGCACTCTAATGCAGTGGATATTTGAAGCATTGGGGAGCGGTTGTA
AAGAAAAAACTCATGTATGCTGTGTAAAGTAGTTTACATGGGGTCGCTGA
GAACTTGTGCACTGTACATGTGTACTTGATATACTTCTATGTACATGTAT
GCACTACAGTATCAAGCGTTCAGTACGGCCTCGGTAAAAGCGCTGTCATT
TATGTAGCATACAGCTGTATGTACTCCACGTATATACTAAATAGCAGTGC
CTGTGAGGGCATGGATTATTGAAGTGACTTGAGTCGAGGCTTCAATAAGG
GCCAGACTGTTATGCATTTGTACAACGCGGGGTACTGGGCATGTCTGGAG
GCACTCGTGAAAAGACCAAAATCCCGTTGTCACCAGCGACGCCAGAGTTC
ATTGTACAGCTTGACCATTTATTCGGATAATCGTGCGCGCGAAGGCGCAG
CTAGAGCAGAGTCACAGAGCAAATCACGCCTCCCGTGCATGCATGTCTCT
GCACCTCAGTGCTCATCCAATCGCGTGAGCATCAAGTCGTACAGACCGCA
CTGTCTCGTTGAAGATACTTTTGTGTCGGCCCACACTCGCTCATTGCTTT
ACACTTTGTTGCTACTCTGCCCCCTTCCCACCAGGCGAGCGCATGAGCAT
CAAGGCGACGCGCGCGTGCATCGACGCCATCCTGGACGGCTCCATCGACT
CCGCGCCCACGGTCTCCGACCCTGTCTTTGGCTTTGACATCCCCACCAAG
CTGAAGGACGTGCCCGCGTCAGTGCTCGACCCTAAGCAGTCCTGGAAGGA
CAAGGACGCGTACGAGGCTGCCCGCTCCAAGCTCGCCGGCATGTTCAAGA
AGAACTACGAGCAGTTCAGGAAGCCCGGCATGACCGACTACGCTTCGTTC
GGACCCAAGTAA
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Coding sequence (CDS) from alignment at Contig_61:681455..688316-

>mRNA_8742 ID=mRNA_8742|Name=jgi.p|Trimin1|169003|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1626bp|location=Sequence derived from alignment at Contig_61:681455..688316- (Tribonema minus UTEX_B_3156 )
ATGCATGCGTCCACCATATCTTCGTCCTCAGTTGGCATAGATAAGGCTAC
TGGGATCAGCAAACCGGCTTTCTACCGGAACCTGCCATATCCCGACATCT
ATGAGCACGAGGTTGCCAACAAGGAGGGAGTTACCGCCTCCAATGGCGCC
TTTGTGGTCACCACTGGAAAGTTCACAGGGCGATCACCCAAGGATAAGTT
TTTCGTTCAGCAGGCTCCCTCCGACAAGAACTTGGACTGGGGCAAGGTGA
ACATGCCCGTGAGCCTCCAGGTGTACAAGGACGTGTACCAGCGCTCCGTT
GACCACTACAACAAGAACGTGAGCAAGGCGTACGTGTTTGACGGCTTCTG
CGGCACCAACCCCAAGTCCCGCAAGGCCGTGCGCATCATCACGGAGCTGG
CGTGGCAACACCACTTCGTGACAAACATGTTCATCCGGCCCACGAGCCCG
GAGGAGATCAAGGACTTCAAGCCAGACTTCACCATCATCAACGCGTGCAA
GGTGACGAACCCCGACTGGAAGGAGAAGAAGCTCAACAGCGATGTCGCAG
CCATCTTCAATGTTGAAGATCGCATGGCGGTGATCACGGGCACGTGGTAC
GGTGGGGAGATGAAGAAGGGCGTGTTCTCAATGATGAACTACTGGCTGCC
GCTGGAGGGCATCATGGCCATGCACTGCTCTGCCAACAAGGCAAGCCACC
AATCACTTATCGGCAAGGGCGGCGACACCGCCCTCTTCTTTGGTCTCTCG
GGCACCGGCAAGACGACCCTGTCCGCCGACCCCAACCGCTTCCTCATTGG
AGACGACGAGCACGGCTGGGACGACGATGGCATCTTCAACTTTGAGGGCG
GCTGCTACGCCAAGACCATCAAGCTGCGCCGCGAGAACGAGCCCGAGATC
TTTGACGCCATCAAGCGCGACGCGCTGCTGGAGAACGTCAAGATCCTGGA
GAACGGCGACGTGGACTACGACGACAAGACCATCACGGAGAACGGCCGCG
TCTCGTACCCCATCTACCACATTGCCAACTACGAGCCCACGGGCATGGGC
GGCCACCCCGCGAATGTCATCTTCCTCACGTGCGACGCCTTTGGCGTGCT
GCCGCCGGTGTCACGGCTCAGCGAGGGCCAGGCCATGTACCACTTCCTGT
CGGGATACACGGCGAAGGTGGCGGGGACAGAGAGGGGGATCACGGAGCCG
GTGCCCAACTTCAGCGCGTGCTTTGGCGCGGCGTTCATGACGCTGCACCC
CACTAAGTACGCGGACCTGCTGAAGCAGAAGCTGCAGAAGCACAACACCA
AGTGCTACCTGGTGAACACGGGCTGGACGGGCGGCGCGTACGGCGTCGGC
GAGCGCATGAGCATCAAGGCGACGCGCGCGTGCATCGACGCCATCCTGGA
CGGCTCCATCGACTCCGCGCCCACGGTCTCCGACCCTGTCTTTGGCTTTG
ACATCCCCACCAAGCTGAAGGACGTGCCCGCGTCAGTGCTCGACCCTAAG
CAGTCCTGGAAGGACAAGGACGCGTACGAGGCTGCCCGCTCCAAGCTCGC
CGGCATGTTCAAGAAGAACTACGAGCAGTTCAGGAAGCCCGGCATGACCG
ACTACGCTTCGTTCGGACCCAAGTAA
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