mRNA_8712 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|168947 vs. uniprot
Match: A0A835YNC6_9STRA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNC6_9STRA) HSP 1 Score: 382 bits (982), Expect = 2.140e-134 Identity = 190/190 (100.00%), Postives = 190/190 (100.00%), Query Frame = 1 Query: 1 VEPEVTSRALMRLSVDGKPAGNTAASCPGAGTIVIGLYGKTVPETVANFEALVMGDTDGGYSYKGTTFYKVVQGLNMQAGAVGDFSGKGLTGLSAKKEPFGPENFEVRHGAEGMVSMVRGPDTKNDSRFFITIKPDAGWADGRYVAFGRVLEGLDALRGIDQLKVQTPSNRPLKPVVIEECVMLPAPDAA 570 VEPEVTSRALMRLSVDGKPAGNTAASCPGAGTIVIGLYGKTVPETVANFEALVMGDTDGGYSYKGTTFYKVVQGLNMQAGAVGDFSGKGLTGLSAKKEPFGPENFEVRHGAEGMVSMVRGPDTKNDSRFFITIKPDAGWADGRYVAFGRVLEGLDALRGIDQLKVQTPSNRPLKPVVIEECVMLPAPDAA Sbjct: 1 VEPEVTSRALMRLSVDGKPAGNTAASCPGAGTIVIGLYGKTVPETVANFEALVMGDTDGGYSYKGTTFYKVVQGLNMQAGAVGDFSGKGLTGLSAKKEPFGPENFEVRHGAEGMVSMVRGPDTKNDSRFFITIKPDAGWADGRYVAFGRVLEGLDALRGIDQLKVQTPSNRPLKPVVIEECVMLPAPDAA 190
BLAST of jgi.p|Trimin1|168947 vs. uniprot
Match: D7G0Y5_ECTSI (Peptidyl-prolyl cis-trans isomerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0Y5_ECTSI) HSP 1 Score: 184 bits (468), Expect = 3.520e-55 Identity = 94/183 (51.37%), Postives = 126/183 (68.85%), Query Frame = 1 Query: 4 EPEVTSRALMRLSVDGKPAGNTAASCPGAGTIVIGLYGKTVPETVANFEALVMGDTDGGYSYKGTTFYKVVQGLNMQAGAVGDFSGKGLTGLSAKKEPFGPENFEVRHGAEGMVSMVRGPDTKNDSRFFITIKPDAGWADGRYVAFGRVLEGLDALRGIDQLKVQTPSNRPLKPVVIEECVML 552 EPEVT RA M +++ P+G +VI LYGK VP+TV NF AL+ G G SY+GT Y+V+ GLN+Q GA+G SGK +G+S+ E ENF+++H EG++SMVR D + DSRFFI+IK DAGWAD RYVAFGR+ EG+D + I+++KV+ +N+P KPVVIE+C ML Sbjct: 94 EPEVTQRAFMDITIGDSPSGR----------LVINLYGKVVPDTVKNFVALITGKNAAGVSYQGTEAYRVLDGLNIQMGAIGSRSGK--SGVSSTGENIPQENFDIKHMKEGLLSMVRNADAQGDSRFFISIKDDAGWADDRYVAFGRIAEGMDVVHLIERVKVEGGTNKPKKPVVIEKCGML 264
BLAST of jgi.p|Trimin1|168947 vs. uniprot
Match: A0A6V1WNP3_HETAK (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1WNP3_HETAK) HSP 1 Score: 166 bits (421), Expect = 1.670e-48 Identity = 87/181 (48.07%), Postives = 114/181 (62.98%), Query Frame = 1 Query: 10 EVTSRALMRLSVDGKPAGNTAASCPGAGTIVIGLYGKTVPETVANFEALVMGDTDGGYSYKGTTFYKVVQGLNMQAGAVGDFSGKGLTGLSAKKEPFGPENFEVRHGAEGMVSMVRGPDTKNDSRFFITIKPDAGWADGRYVAFGRVLEGLDALRGIDQLKVQTPSNRPLKPVVIEECVML 552 +VTS+ LS++GKPAG IVI L+G+ P+T ANF ALV G GY Y+G Y+V+Q ++Q G++GD +G+ PFGPENF + H G+VSM RG D K DSRFFI + DAGWADG+YVAFG+V EG ++ I++LK Q P N P K VVIE+C +L Sbjct: 63 KVTSKCFFDLSIEGKPAGR----------IVISLFGEEAPQTCANFRALVEGRP--GYGYRGERAYRVIQDFSVQIGSIGDKTGRSGKSSFDGGAPFGPENFNIPHTDAGLVSMARGLDGKTDSRFFIQTQGDAGWADGKYVAFGKVTEGFTVVQEIEKLKTQPPQNNPTKKVVIEDCGVL 231
BLAST of jgi.p|Trimin1|168947 vs. uniprot
Match: K0T8A9_THAOC (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0T8A9_THAOC) HSP 1 Score: 144 bits (363), Expect = 4.630e-40 Identity = 72/154 (46.75%), Postives = 100/154 (64.94%), Query Frame = 1 Query: 97 IVIGLYGKTVPETVANFEALVMGDTDGGYSYKGTTFYKVVQGLNMQAGAVGDFSGKGLTGLSAKKE--PFGPENFEVRHGAEGMVSMVRGPDTKNDSRFFITIKPDAGWADGRYVAFGRVLE---GLDALRGIDQLKVQTPSNRPLKPVVIEEC 543 +VIGL+G+ +P NF +L GD GG SY GT FY+ + G ++Q GA+G G +GLS+ ++ F P+NF+++H +G+VS VR P+ + DSRFF+ + DAGWADGRY AFG VLE G+D +R I + VQTP N P P+ I C Sbjct: 50 LVIGLFGEAMPRAAENFASLCAGDNAGGRSYAGTRFYRALSGNSIQGGAIGS-PNTGRSGLSSLEDGATFPPDNFDIKHSTQGLVSAVRNPNGEIDSRFFVQTEDDAGWADGRYAAFGIVLEEGGGMDLVRRISNVDVQTPQNSPKDPITIVAC 202
BLAST of jgi.p|Trimin1|168947 vs. uniprot
Match: A0A7R9W6P2_9STRA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W6P2_9STRA) HSP 1 Score: 137 bits (345), Expect = 1.310e-37 Identity = 77/170 (45.29%), Postives = 101/170 (59.41%), Query Frame = 1 Query: 7 PEVTSRALMRLSVDGKPAGNTAASCPGAGTIVIGLYGKTVPETVANFEALVMGDTDGGYSYKGTTFYKVVQGLNMQAGAVGDFSGKGLTGLSAKKEPFGPENFEVRHGAEGMVSMVRGPDTKNDSRFFITIKPDAGWADGRYVAFGRVLEGLDALRGIDQLKVQTPSNRP 516 P VT R + + + + AA GAG +VIGLYG+ +P+T NFE L G+ Y GTTFY+V+ L + GA+GD KG +G SA F P+NF ++H G+VSMVR DSRFFI +K DAGWAD RY AFG V EG+D + I+++ V P N P Sbjct: 16 PRVTKRVYLDVMI----GDDEAAEAEGAGRLVIGLYGELMPKTAENFERLCEGN-----GYAGTTFYRVLSDLQISGGAIGD--PKGDSGKSAFGSSFEPDNFNLKHTKAGLVSMVRDKTGGVDSRFFINLKDDAGWADDRYAAFGIVEEGMDLVGKIEKVDVARPKNTP 174
BLAST of jgi.p|Trimin1|168947 vs. uniprot
Match: A0A7S4MQY5_9STRA (Peptidyl-prolyl cis-trans isomerase n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MQY5_9STRA) HSP 1 Score: 132 bits (331), Expect = 2.000e-34 Identity = 77/184 (41.85%), Postives = 105/184 (57.07%), Query Frame = 1 Query: 7 PEVTSRALMRLSV-DGKPAGNTAASCPGAGTIVIGLYGKTVPETVANFEALVMGDTDGGYSYKGTTFYKVVQGLNMQAGAVGDFSGKGLTGLSAKKEPFGPENFEVRHGAEGMVSMVRGPDTKNDSRFFITIKPDAGWADGRYVAFGRVLEGLDALRGIDQLKVQTPSNRPLKPVVIEECVMLP 555 P +T R + + + D +P G IVIGLYG+ +P+T NFE L G+ SY GTTFY+ + + GA+ D SG +G SA PF P+N+ ++H G+VSMV+ DSRFFITIK DAGWAD RY AFG V EG+D + I+++ V P N P + I+ +LP Sbjct: 115 PTITKRVFLDVKIGDEEP-----------GRIVIGLYGELMPKTSENFEKLCEGN-----SYGGTTFYRALSEFQISGGAIDDPSGN--SGKSAFGAPFEPDNYNLKHTKAGLVSMVKDKSGGADSRFFITIKDDAGWADDRYAAFGIVEEGMDLVGKIEKVDVSRPKNTPKVAISIQRSGLLP 280
BLAST of jgi.p|Trimin1|168947 vs. uniprot
Match: A0A1Y1IAJ1_KLENI (Cyclophilin n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IAJ1_KLENI) HSP 1 Score: 132 bits (332), Expect = 2.990e-34 Identity = 74/180 (41.11%), Postives = 103/180 (57.22%), Query Frame = 1 Query: 7 PEVTSRALMRLSVDGKPAGNTAASCPGAGTIVIGLYGKTVPETVANFEALVMGDTDGGYSYKGTTFYKVVQGLNMQAGAVGDFS-GKGLTGLSAKKEPFGPENFEVRHGAEGMVSMVRGPDTKNDSRFFITIKPDAGWADGRYVAFGRVLEGLDALRGIDQLKVQTPSNRPLKPVVIEEC 543 P+VTSR + +SVDG+PAG +V+GL+G+ VP T NF L G+ G+ YK +TF+++++ +Q G DF G GL G S F ENF VRH + GM+SM N S+FFIT+KP W DGR+V FG+VLEG+D +R ++ + +P P V I C Sbjct: 148 PKVTSRVFLDISVDGEPAGR----------VVLGLFGEAVPRTAENFRVLATGEK--GFGYKNSTFHRIIKNFVVQGG---DFEFGNGLGGKSIYGWKFKDENFSVRHSSPGMLSMANSGPNTNGSQFFITLKPTP-WLDGRHVVFGKVLEGMDIVRKMEDVPTSSPFYAPPYRVAIVNC 311
BLAST of jgi.p|Trimin1|168947 vs. uniprot
Match: A0A150GUA2_GONPE (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150GUA2_GONPE) HSP 1 Score: 127 bits (319), Expect = 1.070e-33 Identity = 78/186 (41.94%), Postives = 108/186 (58.06%), Query Frame = 1 Query: 4 EPEVTSRALMRLSVDGKPAGNTAASCPGAGTIVIGLYGKTVPETVANFEALVMGDTDGGYSYKGTTFYKVVQGLNMQAGAV--GDFS-GKGLTGLSAKKEPFGPENFEVRHGAEGMVSMVRGPDTKNDSRFFITIKPDAGWADGRYVAFGRVLEGLDALRGIDQLKVQTPSNRPLKPVVIEECVML 552 EP VT + +++ G PAG IV+GLYG+ VP+TVANF AL G+ G+ YKG TF+++++ +Q GDF G G G S F ENF++ H A G++SM N S+FFIT D W +GR+V FGRVLEG+D +R ++ ++V S RP +PVVIE C +L Sbjct: 15 EPVVTQKVFFDVTLGGAPAGR----------IVLGLYGEVVPKTVANFVALSTGEK--GFGYKGCTFHRIIKNFVLQPAVAQGGDFERGNGTGGYSIYGRRFPDENFKLLH-APGVLSMANAGPNTNGSQFFITTV-DTPWLNGRHVVFGRVLEGMDVVRTLEDVQVDR-SARPTQPVVIENCGLL 185
BLAST of jgi.p|Trimin1|168947 vs. uniprot
Match: A0A1Y2HK00_9FUNG (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Catenaria anguillulae PL171 TaxID=765915 RepID=A0A1Y2HK00_9FUNG) HSP 1 Score: 129 bits (325), Expect = 1.390e-33 Identity = 83/196 (42.35%), Postives = 113/196 (57.65%), Query Frame = 1 Query: 4 EPEVTSRALMRLSVDGKPAGNTAASCPGAGTIVIGLYGKTVPETVANFEALVMGDTDG---GYSYKGTTFYKVVQGLNMQAGAVGDFS-GKGLTGLSAKKEPFGPENFEVRHGAEGMVSMVR-GPDTK-------NDSRFFITIKPDAGWADGRYVAFGRVLEGLDALRGIDQLKVQTPSNRPLKPVVIEECVMLP 555 +PEVT + + + K AG IVIGLYGK VP+TVANF+AL G DG G+ YKG+ F++V+ +Q G DF+ G G G S E F ENF+++H A G++SM G DT N S+FFIT P W +GR+V FG+V+EG+ +R I+ + TP +RP+KPVVI + LP Sbjct: 36 KPEVTDKVYFDIKIGDKDAGR----------IVIGLYGKVVPKTVANFKALATGKHDGKELGFGYKGSGFHRVIPSFMIQGG---DFTRGDGTGGKSIYGEKFEDENFDLKHTAAGVLSMANAGADTACFTLLFLNGSQFFITTVPTP-WLNGRHVVFGKVIEGMRTVRRIEMSET-TPGDRPVKPVVIADAGELP 216
BLAST of jgi.p|Trimin1|168947 vs. uniprot
Match: A0A0M0JR45_9EUKA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JR45_9EUKA) HSP 1 Score: 125 bits (315), Expect = 3.140e-33 Identity = 75/187 (40.11%), Postives = 107/187 (57.22%), Query Frame = 1 Query: 7 PEVTSRALMRLSVDGKPAGNTAASCPGAGTIVIGLYGKTVPETVANFEALVMGDTDGGYSYKGTTFYKVVQGLNMQAGAVGDFSGKGLTGLSAKKEPFGPENFEVRHGAEGMVSMVR----GPDTKNDSRFFITIKPDAGWADGRYVAFGRVLEGLDALRGIDQLKVQTPSNRPLKPVVIEECVMLP 555 P+VTSR + +++DG PAG I I LYG+ P NF AL G+ GY Y+G++F+K++ GL MQAG V S + G +PF +N+ ++H GMVSMV G ++D+RF I + DAG+ DGRY AFGRV G++ +R I+Q+ V+T P++ V IE LP Sbjct: 5 PKVTSRCYLDVAIDGSPAGR----------IAIDLYGEVAPRAAENFRALCTGEK--GYGYQGSSFFKILSGLVMQAGEVPGHSS--IYG----DQPFAHDNYLIKHNVAGMVSMVNTGVGGNSGQSDTRFLIQLPDDAGFLDGRYEAFGRVSAGMNVVRMIEQVPVKTTRQVPVQKVSIEAAGELP 173 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|168947 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_8712 ID=mRNA_8712|Name=jgi.p|Trimin1|168947|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=573bp|location=Sequence derived from alignment at Contig_61:442525..445417+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. GTGGAGCCGGAGGTTACCAGCAGGGCGCTGATGCGGCTTTCAGTGGATGGback to top protein sequence of jgi.p|Trimin1|168947 >Trimin1|168947|e_gw1.61.12.1 ID=Trimin1|168947|e_gw1.61.12.1|Name=jgi.p|Trimin1|168947|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=191bp VEPEVTSRALMRLSVDGKPAGNTAASCPGAGTIVIGLYGKTVPETVANFEback to top mRNA from alignment at Contig_61:442525..445417+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_8712 ID=mRNA_8712|Name=jgi.p|Trimin1|168947|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2893bp|location=Sequence derived from alignment at Contig_61:442525..445417+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_61:442525..445417+ >mRNA_8712 ID=mRNA_8712|Name=jgi.p|Trimin1|168947|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=573bp|location=Sequence derived from alignment at Contig_61:442525..445417+ (Tribonema minus UTEX_B_3156 )back to top |