mRNA_8704 (mRNA) Tribonema minus UTEX_B_3156
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Overview
Homology
BLAST of jgi.p|Trimin1|350359 vs. uniprot
Match: A0A835YNU9_9STRA (GRIP domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNU9_9STRA) HSP 1 Score: 678 bits (1749), Expect = 5.920e-242 Identity = 460/460 (100.00%), Postives = 460/460 (100.00%), Query Frame = 1
Query: 1 MSEANSHTAAASAATPVAAASGDAQESTLAKYKRLLTLARRSIEENQRQXXXXXXXXXXXRDELSQTQAAQRQSQPTDAEPLAVLRRVDHDGFTWLLLEHEXXXXXXETVLAWRKFESVDEVQAFARRPGAEPLVVPACSLSPEECEAIQAAADARVSQIREDFRKYRDAEVQMAYSGGGGKHRRPGGAXXXXXXXXDAARIQELMEEVQNLQSELAEQDQMWRAAYEKQRAAIALPDDXXXXXXXXXXXXXXXXVREAERLRRAGSEAEVAAQWRQRYEAASREKEDALAKLEMLAAAHRHSDGGGSGSANGTTMDPAAIAHAALEAKYSALKEEYRLYRRKAMAALQGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVDESKLPYLRNLLLKYLGTDDAIARANMERAMGVVLQFSSAERDELRARREREEAANTRAWLSGVTALLGSKGGT 1380
MSEANSHTAAASAATPVAAASGDAQESTLAKYKRLLTLARRSIEENQRQXXXXXXXXXXXRDELSQTQAAQRQSQPTDAEPLAVLRRVDHDGFTWLLLEHEXXXXXXETVLAWRKFESVDEVQAFARRPGAEPLVVPACSLSPEECEAIQAAADARVSQIREDFRKYRDAEVQMAYSGGGGKHRRPGGAXXXXXXXXDAARIQELMEEVQNLQSELAEQDQMWRAAYEKQRAAIALPDDXXXXXXXXXXXXXXXXVREAERLRRAGSEAEVAAQWRQRYEAASREKEDALAKLEMLAAAHRHSDGGGSGSANGTTMDPAAIAHAALEAKYSALKEEYRLYRRKAMAALQGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVDESKLPYLRNLLLKYLGTDDAIARANMERAMGVVLQFSSAERDELRARREREEAANTRAWLSGVTALLGSKGGT
Sbjct: 1 MSEANSHTAAASAATPVAAASGDAQESTLAKYKRLLTLARRSIEENQRQXXXXXXXXXXXRDELSQTQAAQRQSQPTDAEPLAVLRRVDHDGFTWLLLEHEXXXXXXETVLAWRKFESVDEVQAFARRPGAEPLVVPACSLSPEECEAIQAAADARVSQIREDFRKYRDAEVQMAYSGGGGKHRRPGGAXXXXXXXXDAARIQELMEEVQNLQSELAEQDQMWRAAYEKQRAAIALPDDXXXXXXXXXXXXXXXXVREAERLRRAGSEAEVAAQWRQRYEAASREKEDALAKLEMLAAAHRHSDGGGSGSANGTTMDPAAIAHAALEAKYSALKEEYRLYRRKAMAALQGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVDESKLPYLRNLLLKYLGTDDAIARANMERAMGVVLQFSSAERDELRARREREEAANTRAWLSGVTALLGSKGGT 460
BLAST of jgi.p|Trimin1|350359 vs. uniprot
Match: D8LI32_ECTSI (GRIP domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LI32_ECTSI) HSP 1 Score: 196 bits (498), Expect = 9.830e-54 Identity = 171/443 (38.60%), Postives = 227/443 (51.24%), Query Frame = 1
Query: 76 ESTLAKYKRLLTLARRSIEENQRQXXXXXXXXXXXRDELSQTQAAQRQS-QPTDAEPLAVLRRVDHDGFTWLLLEHEXXXXXXETVLAWRKFESVDEVQAFARRPGA-EPLVVPACSLSPEECEAIQAAADARVSQIREDFRKYR----------DAEV-QMAYSGGGGKHRRPGGAXXXXXXXXDAARIQELMEEVQNLQSELAEQDQMWRAAYEKQRAAIALPDDXXXXXXXXXXXXXXXXVREAERLRRAGSEAEVAAQWRQRYEAASREKEDALAKLEMLAAAHRHSDGGGSGSANGTTMDPAAI-AHAALEAKYSALKEEYRLYRRKAMAALQGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVDESKLPYLRNLLLKYLGTDDAIARANMERAMGVVLQFSSAERDELRARREREEAANTRAWLSGVTALL 1362
+ TLAK+KRLL+LARRSIEENQRQ R+ L + A+R+ + A PL +LRRV G WLL+E++ ET W+ F V FA EPL +P SLSPEE + A +V+ IRE++RK+R +AE+ Q++ K RR G D ++ L +E+Q ++ EL ++++ WR AY+KQ V+E E L+R G + +AAQWRQRYE S EKEDA+AKL+ML DGG A A+L KY LKEEYRLYR+KAM A+QG XXXXXXXX + + KL YL+NL+LKYLGTD+ AR +MERA+ VLQFS ER +L+ R+ A T AW+S T +
Sbjct: 35 QETLAKFKRLLSLARRSIEENQRQITEKDGQLAALREALGAAENARRRDDEHAGATPLQLLRRVREGGMWWLLVEYDDEY---ETQ-GWKGFADEAAVSEFANSVNVGEPLNIPPVSLSPEESATVLEDARKQVASIREEYRKFRVKSELGRKQREAEIRQVSAESIAEKQRRISGQGAAV----DKEQVHALEDELQRVRDELTDKEESWRQAYQKQ-------------------------VKETEVLKREGGDTALAAQWRQRYEKLSLEKEDAVAKLDML-----KGDGGXXXXXXXXXXXXXXXEAVASLMKKYQDLKEEYRLYRKKAMHAIQGAGXXXXXXXXGLE----------------------LQDPKLQYLKNLMLKYLGTDEGEAREHMERAIATVLQFSEQERQDLKEARQ----AQTVAWMSNFTGMF 413
BLAST of jgi.p|Trimin1|350359 vs. uniprot
Match: A0A7S2S2V8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S2V8_9STRA) HSP 1 Score: 135 bits (341), Expect = 1.960e-31 Identity = 147/481 (30.56%), Postives = 205/481 (42.62%), Query Frame = 1
Query: 40 ATPVAAASGDAQESTLAKYKRLLTLARRSIEENQRQXXXXXXXXXXXRDELSQTQAAQRQS------------------------------QPTDAEPLAVLRRVDHDGFTWLLLEHEXXXXXXETVLAWRKFESVDEVQAFARRPGAEPLVVPACSLSPEECEAIQAAADARVSQIREDFRKYR----------DAEVQMAYSGG-GGKHRRPGGAXXXXXXXXDAARIQELMEEVQNLQSELAEQDQMWRAAYEKQRAAIALPDDXXXXXXXXXXXXXXXXVREAERLRRAGSEAEVAAQWRQRYEAASREKEDALAKLEMLAAAHRHSDGGGSGSANGTTMDPAAIAHAALEAKYSALKEEYRLYRRKAMAALQGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVDESKLPYLRNLLLKYLGTDDAIARANMERAMGVVLQFSSAERDELRARREREEAANTRAWLSGVTAL 1359
ATP AA GD + +YKRLL +R+ +E Q++ EL QT QRQS A P LRRVD +G +L E E WR F + E+ F RR EPL +P L+PEE E + A V++I E+FR++R DAE + A + + RR G AR+Q E+V L+ +LA+Q++ WR +K RE E+LR GSEA +AAQWRQRYE SREK + +AKL +++ A TT D ++L +Y L+EEY+LYR++AM A+Q +++ + YL+NL++KYL TD+ AR +MERA+ VLQFS AE+ ++ RR A WL V L
Sbjct: 27 ATP--AAPGDKAAQQINQYKRLLIQSRQMLENYQKKLQEKERIVEHLAHEL-QTTRQQRQSAXXXXXXXXXXXXXXXXXASTAEPHPSGAGDSRKAVPHRALRRVDVNGGISVLFEFETGEDQ------WRIFHNDLELSDFIRRDSGEPLALPLACLTPEESEHVAEEAKNSVAKITEEFRRFRVRAEISRKQKDAEARQATASSIAEQQRRINGQDVESEL--QKARLQ--AEQVVQLREQLADQEERWRKQCDK-------------------------LSRENEKLRSEGSEAALAAQWRQRYEQCSREKAELVAKLSIVSTPAE---------ARSTTGD-----FSSLVKQYEDLREEYKLYRKRAMEAIQ--EKELLLAQSGAAALRFAGGRPSRRGASPVPHPPPLEDPRFQYLKNLMIKYLCTDEFEAREHMERAVMTVLQFSDAEQSFVQERRAESSVAWLTNWLPSVPNL 453
BLAST of jgi.p|Trimin1|350359 vs. uniprot
Match: A0A6A3FS57_9STRA (GRIP domain-containing protein n=16 Tax=Phytophthora TaxID=4783 RepID=A0A6A3FS57_9STRA) HSP 1 Score: 98.6 bits (244), Expect = 1.850e-18 Identity = 105/448 (23.44%), Postives = 187/448 (41.74%), Query Frame = 1
Query: 76 ESTLAKYKRLLTLARRSIEENQRQXXXXXXXXXXXRDELSQTQAAQRQSQPTDA---EPLAVLRRVDHDGFTWLLLEHEXXXXXXETV-LAWRKFESVDEVQAFARRPGAEPLVVPACSLSPEECEAIQAAADARVSQIREDFRKYR----------DAEVQMAYSGGGGKHRRPGGAXXXXXXXXDAARIQELMEEVQNL---QSELAEQDQMWRAAYEKQRAAIALPDDXXXXXXXXXXXXXXXXVREAERLRRAGSEAEVAAQWRQRYEAASREKEDALAKLEMLAAAHRHSDGGGSGSANGTTMDPAAIAHAALEAKYSALKEEYRLYRRKAMAALQ-----------------GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVDESKLPYLRNLLLKYLGTDDAIARANMERAMGVVLQFSSAERDELRARREREE 1317
E T K KRLL +A+RSI+ ++++ R+EL++++ Q S DA +P +L +V H W L+E+ E AW F S E+QA+A R EPL +P SL+P E E ++ + + +++E+FR+YR DAE++ + K + +Q +++ L Q+E E++ WR +EK +++ E+L E +A +WR+RYE + REK++ K+E L + G + S NG L++E+ YR++A+ A++ G A ++ YL+N++ KY+ +D A+ +ME+A+ VL F+ AE ++ +R++++
Sbjct: 73 EDTENKLKRLLAMAKRSIDNSKQEIAEKDAAIQQLREELAKSRQTQH-SWAVDAATRDPRQLLHKVSHGNLLWCLVEYADESELDEAKEFAWHCFRSEAEIQAYANRASGEPLTLPDFSLTPYEVERVKKSLKEEIDRVQEEFRRYRVRSEITRKQKDAEIRKMSANAMAKQ------TEQISETDLSGELQSSKAQIRRLTKAQAEAEERESDWRRKFEK-------------------------LMKDYEKLSGTMGETVLAMEWRERYEQSVREKQELEKKMEELKLMTSGAFGNSTDSGNGDLQS---------------LRQEFAQYRKRALNAVEQKEKELNDMQAHYHENGGGSSNASRTNSFKEVRVRRMSMESNSSLSGFETPNATKTNE--YLKNIVYKYMASDQDEAKEHMEKAIATVLNFTPAEVASIQEKRKQQQ 471
BLAST of jgi.p|Trimin1|350359 vs. uniprot
Match: A0A8K1CW38_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CW38_PYTOL) HSP 1 Score: 97.1 bits (240), Expect = 1.590e-17 Identity = 103/456 (22.59%), Postives = 186/456 (40.79%), Query Frame = 1
Query: 76 ESTLAKYKRLLTLARRSIEENQRQXXXXXXXXXXXRDELSQTQAAQR--QSQPTDAEPLAVLRRVDHDGFTWLLLEHEXXXXXXETVLAWRKFESVDEVQAFARRPGAEPLVVPACSLSPEECEAIQAAADARVSQIREDFRKYR----------DAEVQMAYSGGGGKHRRPGGAXXXXXXXXDA-ARIQELMEEVQNLQSELAEQDQMWRAAYEKQRAAIALPDDXXXXXXXXXXXXXXXXVREAERLRRAGSEAEVAAQWRQRYEAASREKEDALAKLEMLAAAHRHSDGGGSGSANGTTMDPAAIAHAALEAKYSALKEEYRLYRRKAMAALQGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVDES-----------------KLP-------YLRNLLLKYLGTDDAIARANMERAMGVVLQFSSAERDELRARREREEAANTR 1332
E T K KRLL +A+RSI+ ++++ R EL+ A ++ T +P +L +V W L+E+ + AW +F+S ++++A+A R EPL +P+ SL+P E E ++ + +++E+FR+YR DAE++ + + A A+I+ L ++ Q+E E++ WR +EK +++ E+L E +A +WR+RYE A RE+ED K+E L +A +A + +L++E+ YRR+AM A+ + + + ++P YL+N++ KY+ T+ A+ +ME+A+ VL F+ AE ++ +R + A R
Sbjct: 58 EETETKLKRLLAMAKRSIDNSKQELADKDAEIEQLRAELATKAHASHTWETNETTRDPRRILSKVAQGNTLWCLVEYASDDSDDTSDFAWHRFQSEEQIKAYANRANGEPLALPSLSLTPFEVERMKKDLKEEIDRVQEEFRRYRVRAEITRKQKDAEIRKMSANAVARQAEQISETDLSGELQSARAQIRRLSKQ----QAETEEREAEWRRKFEK-------------------------LMKDYEKLSGTMGETVLATEWRERYEQAVREREDTERKMEELRSA---------------------LASTNMNVDLQSLRQEFAQYRRRAMNAVDQKDRELHEIQSQYYENGSANSSRTGSLKDFGGPPRSSNGNGPRPLRRMSSNNSLGGLEVPNVTTTNEYLKNIVYKYMTTEQDEAKEHMEKAIATVLNFTPAESQAVQEKRRAQAGAQVR 463
BLAST of jgi.p|Trimin1|350359 vs. uniprot
Match: A0A484DVL9_BRELC (GRIP domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DVL9_BRELC) HSP 1 Score: 93.6 bits (231), Expect = 7.910e-17 Identity = 106/442 (23.98%), Postives = 188/442 (42.53%), Query Frame = 1
Query: 76 ESTLAKYKRLLTLARRSIEENQRQXXXXXXXXXXXRDELSQTQAAQRQSQPTDA---EPLAVLRRVDHDGFTWLLLEHEXXXXXXETV-LAWRKFESVDEVQAFARRPGAEPLVVPACSLSPEECEAIQAAADARVSQIREDFRKYR----------DAEVQ-MAYSGGGGKHRRPGGAXXXXXXXXDAARIQELMEEVQNLQSELAEQDQMWRAAYEKQRAAIALPDDXXXXXXXXXXXXXXXXVREAERLRRAGSEAEVAAQWRQRYEAASREKEDALAKLEMLAAAHRHSDGGGSGSANGTTMDPAAIAHAALEAKYSALKEEYRLYRRKAMAALQGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVDES------KLP-------YLRNLLLKYLGTDDAIARANMERAMGVVLQFSSAERDELRARREREE 1317
E T K KRLL +A+RSI+ ++++ R ELS T R S +A +P VL +V H W ++E+ E+ AW F S E+QA+A R EPL +P SL+P E + ++ + + +++E+FR+YR DAE++ M+ + + A+I+ L N Q+E E++ WR +E ++ E+L E +A +WR+RYE ++REK+ K+E L + GG S +N A + +L++E+ YR++A+ ++ + + + ++P YL+N++ KY+ +D A+ +ME+A+ VL F+ AE ++ RR++++
Sbjct: 65 EETENKLKRLLAMAKRSIDNSKQELVEKDNTVQKLRLELS-TNQQDRHSWVVNAFTRDPRRVLYKVAHLDLLWCMIEYAHENEGNESKEYAWHCFHSEAEIQAYANRASGEPLTLPDFSLTPNEVDRVKKSLKEEIDRVQEEFRRYRVRSEITRKQKDAEIRKMSANVVARQTEMISETDLMGELQSSKAQIRRLA----NAQAEAEERESDWRRKFE-------------------------ILQKDYEKLSGTMGETALAMEWRERYEQSAREKQQLEQKMEELKLMPSGAIGGSSDKSN---------------AGFQSLRQEFANYRKQALNVVEQKEKELSDIQAQYHDTGKGIGGHKSSFREGIARRMSGESNSSLSGFEMPNATKTNEYLKNIVYKYMASDQDEAKEHMEKAIATVLNFTPAEVASIQERRKQQQ 461
BLAST of jgi.p|Trimin1|350359 vs. uniprot
Match: H3GH33_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GH33_PHYRM) HSP 1 Score: 91.7 bits (226), Expect = 1.960e-16 Identity = 91/341 (26.69%), Postives = 152/341 (44.57%), Query Frame = 1
Query: 76 ESTLAKYKRLLTLARRSIEENQRQXXXXXXXXXXXRDELSQTQAAQRQSQPTDAE---PLAVLRRVDHDGFTWLLLEHEXXXXXXETV-LAWRKFESVDEVQAFARRPGAEPLVVPACSLSPEECEAIQAAADARVSQIREDFRKYR----------DAEVQMAYSGGGGKHRRPGGAXXXXXXXXDAARIQELMEEVQNL---QSELAEQDQMWRAAYEKQRAAIALPDDXXXXXXXXXXXXXXXXVREAERLRRAGSEAEVAAQWRQRYEAASREKEDALAKLEMLAAAHRHSDGGGSGSANGTTMDPAAIAHAALEAKYSALKEEYRLYRRKAMAALQ 1047
E T K KRLL +A+RSI+ ++++ RDELS++Q A R S DA P +L +V H G W L+E+ ++ AW F E+QA+A R EPL +P SL+P E E ++ + + +++E+FR+YR DAE++ + K + +Q +V+ L Q+E E++ WR ++K +++ E+L +A +WR+RYE + REK++ K+E L ++GG S S NG L++E+ YR++A+ A++
Sbjct: 18 EETETKLKRLLAMAKRSIDNSKQELVEKDEVIEKLRDELSKSQQA-RHSWVVDASTRSPRQLLHKVSHGGLLWCLVEYADEIEFEDSKEFAWHCFRDEGEIQAYADRASGEPLTLPDFSLTPYEVERVKKSLKEEIDRVQEEFRRYRVRSEITRKQKDAEIRKMSANVMAKQ------TEQILETDLSGELQSSKAQVRRLTKAQAEAEERESDWRRKFDK-------------------------LMKDYEKLSGTMGGTVLAMEWRERYEQSVREKQELEKKVEELKLV---ANGGFSDSGNGDLQS---------------LRQEFAQYRKRALNAVE 308
BLAST of jgi.p|Trimin1|350359 vs. uniprot
Match: V9EJ60_PHYPR (GRIP domain-containing protein n=45 Tax=Phytophthora TaxID=4783 RepID=V9EJ60_PHYPR) HSP 1 Score: 90.9 bits (224), Expect = 7.300e-16 Identity = 102/454 (22.47%), Postives = 188/454 (41.41%), Query Frame = 1
Query: 76 ESTLAKYKRLLTLARRSIEENQRQXXXXXXXXXXXRDELSQTQAAQRQSQPTDA---EPLAVLRRVDHDGFTWLLLEHEXXXXXXE-TVLAWRKFESVDEVQAFARRPGAEPLVVPACSLSPEECEAIQAAADARVSQIREDFRKYR----------DAEVQMAYSGGGGKHRRPGGAXXXXXXXXDAARIQELMEEVQNLQSELAEQDQMWRAAYEKQRAAIALPDDXXXXXXXXXXXXXXXX---------VREAERLRRAGSEAEVAAQWRQRYEAASREKEDALAKLEMLAAAHRHSDGGGSGSANGTTMDPAAIAHAALEAKYSALKEEYRLYRRKAMAALQ-----------------GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVDESKLPYLRNLLLKYLGTDDAIARANMERAMGVVLQFSSAERDELRARREREE 1317
E T K KRLL +A+RSI+ ++++ R+EL+++Q A R S DA +P +L +V H W L+E+ + T AW F + E+Q +A R EPL +P S++P E E ++ + + +++E+FR+YR DAE++ + + +L E+Q+ ++++ + A E+ R A+ +++ E+L E +A +WR+RYE + REK++ K+E L + G GS + NG L++E+ YR++A+ A++ G A ++ YL+N++ KY+ +D A+ +ME+A+ VL F+ AE ++ +R++++
Sbjct: 79 EETENKLKRLLAMAKRSIDNSKQELAEKDETIQKLREELAKSQQA-RHSWFVDASTRDPRQLLHKVAHGNLLWCLVEYVNENELDDSTEFAWHCFHNEVEIQEYANRATGEPLTLPDLSMAPYEVERVKKSLKEEIDRVQEEFRRYRVRSEITRKQKDAEIRKM-------------SMNVMAKQTEQISETDLSGELQSSKAQIRRLTKAQAEAEERVRIAVCTVQSRCLIYSNYCRVGLQESDWRRKFEKLMKDYEKLSGTMGETILAMEWRERYEQSVREKQELEKKMEELKLMTSGAFGNGSDNGNGDLQS---------------LRQEFAQYRKRALNAVEQKEKELNDIQAQYHENGGGSSNASRTNSFKEVRVRRMSMESNSSLSGFETPNATKTNE--YLKNIVYKYMASDQDEAKEHMEKAIATVLNFTPAEISAIQEKRKQQQ 501
BLAST of jgi.p|Trimin1|350359 vs. uniprot
Match: A0A2P4YJD4_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YJD4_9STRA) HSP 1 Score: 88.2 bits (217), Expect = 1.890e-15 Identity = 84/303 (27.72%), Postives = 140/303 (46.20%), Query Frame = 1
Query: 76 ESTLAKYKRLLTLARRSIEENQRQXXXXXXXXXXXRDELSQTQAAQRQSQPTDA---EPLAVLRRVDHDGFTWLLLEHEXXXXXXETV-LAWRKFESVDEVQAFARRPGAEPLVVPACSLSPEECEAIQAAADARVSQIREDFRKYR----------DAEVQ-MAYSGGGGKHRRPGGAXXXXXXXXDAARIQELMEEVQNLQSELAEQDQMWRAAYEKQRAAIALPDDXXXXXXXXXXXXXXXXVREAERLRRAGSEAEVAAQWRQRYEAASREKEDALAKLEMLAAAHRHSDGGGSGSANG 939
E T K KRLL +A+RSI+ ++++ RDEL ++Q A R S DA +P +L +V H W L+E+ ++ LAW F + +E+QA+A R EPL +P S++P E E ++ + +++E+FR+YR DAE++ M+ + + + A+I+ L + Q+E E++ WR +EK +++ E+L E +A +WR+RYE + REK++ K+E L G GS + NG
Sbjct: 63 EETENKLKRLLAMAKRSIDNSKQELTEKDETIQKLRDELVKSQQA-RHSWFVDASTRDPRQLLHKVAHGNLLWCLVEYANESEFDDSKELAWHCFRTEEEIQAYANRASGEPLTLPDFSMTPYEVERVKKGLKEEIDRVQEEFRRYRVRSEITRKQKDAEIRKMSMNVMAKQTEQISETDLSGELQLSKAQIRRLTK----AQTEAEERESDWRRKFEK-------------------------LMKDYEKLSGTMGETVLAMEWRERYEQSVREKQELEKKMEELKLMTSGVFGNGSDNGNG 335
BLAST of jgi.p|Trimin1|350359 vs. uniprot
Match: B5YLS1_THAPS (Predicted protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B5YLS1_THAPS) HSP 1 Score: 89.0 bits (219), Expect = 2.860e-15 Identity = 114/445 (25.62%), Postives = 173/445 (38.88%), Query Frame = 1
Query: 88 AKYKRLLTLARRSIEENQRQXXXXXXXXXXXRDELSQTQAAQRQSQPTDAEPLAVLRRV------DHDGFT--------------WLLLEHEXXXXXXETVL---------AWRKFESVDEVQAFARRPGAEPLVVPACSLSPEECEAIQAAADARVSQIREDFRKYR----------DAEVQMAYSGGGGKHRRPGGAXXXXXXXXDAARIQELMEEVQNLQSELAEQDQMWRAAYEKQRAAIALPDDXXXXXXXXXXXXXXXXVREAERLRRAGSEAEVAAQWRQRYEAASREKEDALAKLEM-------LAAAHRHSDGGGSGSANGTTMDPAAIAHAALEAKYSALKEEYRLYRRKA----MAALQGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVDESKLPYLRNLLLKYLGTDDAIARANMERAMGVVLQFS 1272
AKYK LL LA+ I+E + + ++ T A P + + V +R+ D+D W L+E+E W KF + + + RR EPL +P SLS E+ + + A VS I E+FR++R DA V+ +S R + A+ + ++ L++E+AEQ+ W+ +Y+ A E E+L+ +G+EA +AAQWR RYEA +EKEDA+ LEM L R D G E KY LKE +RLYR+KA +A QG + +K+ YL+NL++ YLG+D ++ R +ME A+ VL F+
Sbjct: 97 AKYKNLLKLAKERIQEQEGVLDERRSLSSRNQGGVNGTSAID----PNETNIIRVCQRIKEQIDDDNDAMDEIGDVGNSEDSYEIWALIEYETATSDNNDAYDPSSFKRYKQWNKFTNESALSDYIRRDTGEPLTLPPYSLSAEQSQKLAEDAKKAVSSISEEFRRFRVRAEVAKKQADATVRALHSNSVQTTRM---RIEGQDIESELAQAKTDHAQLAALRAEMAEQEARWKESYDLLMA-------------------------ENEKLKSSGAEALLAAQWRHRYEACMKEKEDAVTNLEMEREKIMDLQDQRRKLDAG------------------KYENKYRDLKESFRLYRKKAKEIFLAQQQGETGFLPSLHDT-----------------------GAEGAKISYLKNLMVNYLGSDVSV-REHMEPAIATVLNFT 467 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|350359 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_8704 ID=mRNA_8704|Name=jgi.p|Trimin1|350359|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1444bp|location=Sequence derived from alignment at Contig_61:410612..414725- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGTCAGAGGCGAATTCTCACACCGCTGCGGCGAGTGCAGCAACACCAGTback to top protein sequence of jgi.p|Trimin1|350359 >Trimin1|350359|estExt_Genemark1.C_Ctg_610045 ID=Trimin1|350359|estExt_Genemark1.C_Ctg_610045|Name=jgi.p|Trimin1|350359|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=461bp MSEANSHTAAASAATPVAAASGDAQESTLAKYKRLLTLARRSIEENQRQIback to top mRNA from alignment at Contig_61:410612..414725- Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_8704 ID=mRNA_8704|Name=jgi.p|Trimin1|350359|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=4114bp|location=Sequence derived from alignment at Contig_61:410612..414725- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_61:410612..414725- >mRNA_8704 ID=mRNA_8704|Name=jgi.p|Trimin1|350359|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1383bp|location=Sequence derived from alignment at Contig_61:410612..414725- (Tribonema minus UTEX_B_3156 )back to top |