mRNA_8700 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|350356
Unique Name	mRNA_8700
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|350356 vs. uniprot
Match: A0A835YMX2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMX2_9STRA)

HSP 1 Score: 827 bits (2136), Expect = 2.450e-302
Identity = 413/413 (100.00%), Postives = 413/413 (100.00%), Query Frame = 3

Query:   84 MHSIGMAFLNEPMYSTTASFDGLSWQLAVKRAIGVEEQTTGCKLCGKSPGGTLHARLCQAPRVKAHDTIVHNSVKRATQRILRQYLKTGLVDEDYTPFLGSAGPPGSRRMDIVLPADAFPVTGYDDPTRHLPLMVDVTCFEAQVASRAAKTAADPERCCRDQEAAKTTHYSGHYDQNCYKLATLAIGSFGSIGEQGRKLLETVVTECASRMSVPGGARPKALKGIALARLRSALSAALHMAAIAYGNVAGARTLLEAGMVGEVSYLDGDVQLLKLAYFSGAEPLQFVLDNICSIFPRVPHYMLATVVAHLTPPTYDDVCYEDGAYDPLAPRVHDAAAMQAVLHSFDVEMSFANACALRKRKEPVIIIQCAVRAALARRCATVLRLLPENLFHKEQGPRRRTLLGVDETYQHML 1322
            MHSIGMAFLNEPMYSTTASFDGLSWQLAVKRAIGVEEQTTGCKLCGKSPGGTLHARLCQAPRVKAHDTIVHNSVKRATQRILRQYLKTGLVDEDYTPFLGSAGPPGSRRMDIVLPADAFPVTGYDDPTRHLPLMVDVTCFEAQVASRAAKTAADPERCCRDQEAAKTTHYSGHYDQNCYKLATLAIGSFGSIGEQGRKLLETVVTECASRMSVPGGARPKALKGIALARLRSALSAALHMAAIAYGNVAGARTLLEAGMVGEVSYLDGDVQLLKLAYFSGAEPLQFVLDNICSIFPRVPHYMLATVVAHLTPPTYDDVCYEDGAYDPLAPRVHDAAAMQAVLHSFDVEMSFANACALRKRKEPVIIIQCAVRAALARRCATVLRLLPENLFHKEQGPRRRTLLGVDETYQHML
Sbjct:    1 MHSIGMAFLNEPMYSTTASFDGLSWQLAVKRAIGVEEQTTGCKLCGKSPGGTLHARLCQAPRVKAHDTIVHNSVKRATQRILRQYLKTGLVDEDYTPFLGSAGPPGSRRMDIVLPADAFPVTGYDDPTRHLPLMVDVTCFEAQVASRAAKTAADPERCCRDQEAAKTTHYSGHYDQNCYKLATLAIGSFGSIGEQGRKLLETVVTECASRMSVPGGARPKALKGIALARLRSALSAALHMAAIAYGNVAGARTLLEAGMVGEVSYLDGDVQLLKLAYFSGAEPLQFVLDNICSIFPRVPHYMLATVVAHLTPPTYDDVCYEDGAYDPLAPRVHDAAAMQAVLHSFDVEMSFANACALRKRKEPVIIIQCAVRAALARRCATVLRLLPENLFHKEQGPRRRTLLGVDETYQHML 413

[Close]

BLAST of jgi.p|Trimin1|350356 vs. uniprot
Match: A0A836CN17_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CN17_9STRA)

HSP 1 Score: 519 bits (1337), Expect = 1.240e-180
Identity = 262/268 (97.76%), Postives = 262/268 (97.76%), Query Frame = 3

Query:    3 KVEADLQQLPQGTQRTQALARFRSQRHMHSIGMAFLNEPMYSTTASFDGLSWQLAVKRAIGVEEQTTGCKLCGKSPGGTLHARLCQAPRVKAHDTIVHNSVKRATQRILRQYLKTGLVDEDYTPFLGSAGPPGSRRMDIVLPADAFPVTGYDDPTRHLPLMVDVTCFEAQVASRAAKTAADPERCCRDQEAAKTTHYSGHYDQNCYKLATLAIGSFGSIGEQGRKLLETVVTECASRMSVPGGARPKALKGIALARLRSALSAALHMA 806
            KVEADLQQLPQGTQRTQALAR R QRHMHSIGMAFLNEPMYSTTASFDGLSWQLAVKRAIGVEEQT GCKLCGKSPGGTLHARLCQAPRVKAHDTIVHNSVKRATQRILRQYLKTGLVDEDYTPFLGSAGPPGSRRMDIVLPADAFPVTGYDDPTRHLPLMVDVTCFEAQVASRAAKTAADPERCCRDQEAAKTTHYSGHYDQNCYKLATLAIGSFGSIGEQGRKLLE V TE ASRMSVPGGARPKALKGIALARLRSALSAALHMA
Sbjct:  117 KVEADLQQLPQGTQRTQALARLRLQRHMHSIGMAFLNEPMYSTTASFDGLSWQLAVKRAIGVEEQTAGCKLCGKSPGGTLHARLCQAPRVKAHDTIVHNSVKRATQRILRQYLKTGLVDEDYTPFLGSAGPPGSRRMDIVLPADAFPVTGYDDPTRHLPLMVDVTCFEAQVASRAAKTAADPERCCRDQEAAKTTHYSGHYDQNCYKLATLAIGSFGSIGEQGRKLLEAVATEYASRMSVPGGARPKALKGIALARLRSALSAALHMA 384

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BLAST of jgi.p|Trimin1|350356 vs. uniprot
Match: A0A835Z458_9STRA (Uncharacterized protein (Fragment) n=7 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z458_9STRA)

HSP 1 Score: 520 bits (1339), Expect = 2.530e-180
Identity = 263/268 (98.13%), Postives = 263/268 (98.13%), Query Frame = 3

Query:    3 KVEADLQQLPQGTQRTQALARFRSQRHMHSIGMAFLNEPMYSTTASFDGLSWQLAVKRAIGVEEQTTGCKLCGKSPGGTLHARLCQAPRVKAHDTIVHNSVKRATQRILRQYLKTGLVDEDYTPFLGSAGPPGSRRMDIVLPADAFPVTGYDDPTRHLPLMVDVTCFEAQVASRAAKTAADPERCCRDQEAAKTTHYSGHYDQNCYKLATLAIGSFGSIGEQGRKLLETVVTECASRMSVPGGARPKALKGIALARLRSALSAALHMA 806
            KVEADLQQL QGTQRTQALARFRSQRHMHSIGMAFLNEPMYSTTASFDGLSWQLAVKRAIGVEEQTTGCKLCGKSPGG LHARLCQAPRVKAHDTIVHNSVKRATQRILRQYLKTGLVDEDYTPFLGSAGPPGSRRMDIVLPADAFPVTGYDDPTRHLPLMVDVTCFEAQVASRAAKTAADPERCCRDQEAAKTTHYSGHYDQNCYKLATLAIGSFGSIGEQGRKLLE V TE ASRMSVPGGARPKALKGIALARLRSALSAALHMA
Sbjct:  155 KVEADLQQLLQGTQRTQALARFRSQRHMHSIGMAFLNEPMYSTTASFDGLSWQLAVKRAIGVEEQTTGCKLCGKSPGGALHARLCQAPRVKAHDTIVHNSVKRATQRILRQYLKTGLVDEDYTPFLGSAGPPGSRRMDIVLPADAFPVTGYDDPTRHLPLMVDVTCFEAQVASRAAKTAADPERCCRDQEAAKTTHYSGHYDQNCYKLATLAIGSFGSIGEQGRKLLEAVATEYASRMSVPGGARPKALKGIALARLRSALSAALHMA 422

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BLAST of jgi.p|Trimin1|350356 vs. uniprot
Match: A0A835Z9K7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9K7_9STRA)

HSP 1 Score: 523 bits (1348), Expect = 2.690e-178
Identity = 264/268 (98.51%), Postives = 264/268 (98.51%), Query Frame = 3

Query:    3 KVEADLQQLPQGTQRTQALARFRSQRHMHSIGMAFLNEPMYSTTASFDGLSWQLAVKRAIGVEEQTTGCKLCGKSPGGTLHARLCQAPRVKAHDTIVHNSVKRATQRILRQYLKTGLVDEDYTPFLGSAGPPGSRRMDIVLPADAFPVTGYDDPTRHLPLMVDVTCFEAQVASRAAKTAADPERCCRDQEAAKTTHYSGHYDQNCYKLATLAIGSFGSIGEQGRKLLETVVTECASRMSVPGGARPKALKGIALARLRSALSAALHMA 806
            KVEADLQQLPQGTQRTQALARFRSQRHMHSIGMAFLNEPMYSTTASFDGLSWQLAVKRAIGVEEQTTGCKLCGKSPGGTLHARLCQAPRVKAHDTIVHNSVKRATQRILRQYLKTGLVDEDYTPFLGSAGPPGSRRMDIVLPADAFPVTGYDDPTRHLP MVDVTCFEAQVASRAAKTAADPERCCRDQEAAKTTHYSGHYDQNCYKLATLAIGSFGSIGEQGRKLLE V TE ASRMSVPGGARPKALKGIALARLRSALSAALHMA
Sbjct:  298 KVEADLQQLPQGTQRTQALARFRSQRHMHSIGMAFLNEPMYSTTASFDGLSWQLAVKRAIGVEEQTTGCKLCGKSPGGTLHARLCQAPRVKAHDTIVHNSVKRATQRILRQYLKTGLVDEDYTPFLGSAGPPGSRRMDIVLPADAFPVTGYDDPTRHLPRMVDVTCFEAQVASRAAKTAADPERCCRDQEAAKTTHYSGHYDQNCYKLATLAIGSFGSIGEQGRKLLEAVATEYASRMSVPGGARPKALKGIALARLRSALSAALHMA 565

[Close]

BLAST of jgi.p|Trimin1|350356 vs. uniprot
Match: A0A836CK17_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CK17_9STRA)

HSP 1 Score: 515 bits (1326), Expect = 1.010e-175
Identity = 259/268 (96.64%), Postives = 263/268 (98.13%), Query Frame = 3

Query:    3 KVEADLQQLPQGTQRTQALARFRSQRHMHSIGMAFLNEPMYSTTASFDGLSWQLAVKRAIGVEEQTTGCKLCGKSPGGTLHARLCQAPRVKAHDTIVHNSVKRATQRILRQYLKTGLVDEDYTPFLGSAGPPGSRRMDIVLPADAFPVTGYDDPTRHLPLMVDVTCFEAQVASRAAKTAADPERCCRDQEAAKTTHYSGHYDQNCYKLATLAIGSFGSIGEQGRKLLETVVTECASRMSVPGGARPKALKGIALARLRSALSAALHMA 806
            KV+ADLQQLPQGTQRTQALARFRSQRHMHSIGMAFLNEPMYSTTASFDGLSWQLAVK AIGVEEQT GCKLCGKSPGGTLHARLCQAPRVKAHDTIVHNSVKRATQRILRQY+KTGLVDEDYTPFLGSAGPPGSRRMDIVLPADAFPVTGYDDPTRHLPL+VDVTCFEAQVASRAAKTAADPERCCRDQEAAKTT+YSGHYDQNCYKLATLAIGSFGSIGEQGRKLLE V TE ASRMSVPGGARPKALKGIALARLRSALSAALHMA
Sbjct:  337 KVKADLQQLPQGTQRTQALARFRSQRHMHSIGMAFLNEPMYSTTASFDGLSWQLAVKSAIGVEEQTAGCKLCGKSPGGTLHARLCQAPRVKAHDTIVHNSVKRATQRILRQYIKTGLVDEDYTPFLGSAGPPGSRRMDIVLPADAFPVTGYDDPTRHLPLIVDVTCFEAQVASRAAKTAADPERCCRDQEAAKTTNYSGHYDQNCYKLATLAIGSFGSIGEQGRKLLEAVATEYASRMSVPGGARPKALKGIALARLRSALSAALHMA 604

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BLAST of jgi.p|Trimin1|350356 vs. uniprot
Match: A0A835Z2F2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2F2_9STRA)

HSP 1 Score: 514 bits (1324), Expect = 2.640e-174
Identity = 259/268 (96.64%), Postives = 260/268 (97.01%), Query Frame = 3

Query:    3 KVEADLQQLPQGTQRTQALARFRSQRHMHSIGMAFLNEPMYSTTASFDGLSWQLAVKRAIGVEEQTTGCKLCGKSPGGTLHARLCQAPRVKAHDTIVHNSVKRATQRILRQYLKTGLVDEDYTPFLGSAGPPGSRRMDIVLPADAFPVTGYDDPTRHLPLMVDVTCFEAQVASRAAKTAADPERCCRDQEAAKTTHYSGHYDQNCYKLATLAIGSFGSIGEQGRKLLETVVTECASRMSVPGGARPKALKGIALARLRSALSAALHMA 806
            KVEADLQQLPQGTQR QALARFRSQRHMHSIGMAFLNEPMYSTTASFDGLSWQLAVKRAIGVEEQT GCKLCGKSPGGTLHARLCQAPRVKAHDTIVH SVKRATQRILRQYLKTGLVDEDYTPFLGSAGPPGSRRMDIVLPADAFPV GYDDPTRHLPLMVDVTCFEAQVASRAAKTAADPERCCRDQEAAKTTHYSGHYDQNCYKLATLAIGSFG IGEQGRKLLE V TE ASRMS+PGGARPKALKGIALARLRSALSAALHMA
Sbjct:  418 KVEADLQQLPQGTQRMQALARFRSQRHMHSIGMAFLNEPMYSTTASFDGLSWQLAVKRAIGVEEQTAGCKLCGKSPGGTLHARLCQAPRVKAHDTIVHKSVKRATQRILRQYLKTGLVDEDYTPFLGSAGPPGSRRMDIVLPADAFPVIGYDDPTRHLPLMVDVTCFEAQVASRAAKTAADPERCCRDQEAAKTTHYSGHYDQNCYKLATLAIGSFGGIGEQGRKLLEAVATEYASRMSLPGGARPKALKGIALARLRSALSAALHMA 685

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BLAST of jgi.p|Trimin1|350356 vs. uniprot
Match: A0A836C7Z8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7Z8_9STRA)

HSP 1 Score: 512 bits (1318), Expect = 7.330e-174
Identity = 259/268 (96.64%), Postives = 260/268 (97.01%), Query Frame = 3

Query:    3 KVEADLQQLPQGTQRTQALARFRSQRHMHSIGMAFLNEPMYSTTASFDGLSWQLAVKRAIGVEEQTTGCKLCGKSPGGTLHARLCQAPRVKAHDTIVHNSVKRATQRILRQYLKTGLVDEDYTPFLGSAGPPGSRRMDIVLPADAFPVTGYDDPTRHLPLMVDVTCFEAQVASRAAKTAADPERCCRDQEAAKTTHYSGHYDQNCYKLATLAIGSFGSIGEQGRKLLETVVTECASRMSVPGGARPKALKGIALARLRSALSAALHMA 806
            KVEAD+QQLPQGTQRTQALARF SQRHMHSIGMAFLNEPMYSTTASFDGLSWQLAVKRAIGVEEQT GCKLCGKSPGGTLHARLCQAPRVKAHDTIVHNSVKRATQRILRQYLKTGLVDEDYTPFLGSAG PG RRMDIVLPADAFPVTGYDDPTRHLPLMVDVTCFEAQVASRAAKTAADPERCCRDQEAAKTTHYSGHYDQ CYKLATLAIGSFGSIGEQGRKLLE V TE ASRMSVPGGARPKALKGIALARLRSALSAALHMA
Sbjct:  384 KVEADVQQLPQGTQRTQALARFWSQRHMHSIGMAFLNEPMYSTTASFDGLSWQLAVKRAIGVEEQTAGCKLCGKSPGGTLHARLCQAPRVKAHDTIVHNSVKRATQRILRQYLKTGLVDEDYTPFLGSAGRPGRRRMDIVLPADAFPVTGYDDPTRHLPLMVDVTCFEAQVASRAAKTAADPERCCRDQEAAKTTHYSGHYDQKCYKLATLAIGSFGSIGEQGRKLLEAVATEYASRMSVPGGARPKALKGIALARLRSALSAALHMA 651

[Close]

BLAST of jgi.p|Trimin1|350356 vs. uniprot
Match: A0A835YLG1_9STRA (Protein kinase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLG1_9STRA)

HSP 1 Score: 523 bits (1347), Expect = 8.220e-172
Identity = 265/274 (96.72%), Postives = 267/274 (97.45%), Query Frame = 3

Query:    3 KVEADLQQLPQGTQRTQALARFRSQRHMHSIGMAFLNEPMYSTTASFDGLSWQLAVKRAIGVEEQTTGCKLCGKSPGGTLHARLCQAPRVKAHDTIVHNSVKRATQRILRQYLKTGLVDEDYTPFLGSAGPPGSRRMDIVLPADAFPVTGYDDPTRHLPLMVDVTCFEAQVASRAAKTAADPERCCRDQEAAKTTHYSGHYDQNCYKLATLAIGSFGSIGEQGRKLLETVVTECASRMSVPGGARPKALKGIALARLRSALSAALHMAAIAYGN 824
            KVEADLQQLPQGTQRTQALARFRSQRHMHSIGMAFLNEPMYSTTASFDGLSWQLAVKR IGVEEQTTGCKLCGKSPGGTLHARLCQAPRVKAHDTIVHNSVKRATQRILRQYLKTGLVDEDYTP LGSAGPPGSRRMDIVLPADAFPVTGYDDPTRHLPLMVDVTCFEAQVASRAAKTAADPERCCRDQEAAKTTHYSGHYDQNCYKLATLAIGSFGSIGEQGRKLLE V TE ASRMSVPGGARPKALKGIALARLRSALSAALHMAA + G+
Sbjct:  939 KVEADLQQLPQGTQRTQALARFRSQRHMHSIGMAFLNEPMYSTTASFDGLSWQLAVKRVIGVEEQTTGCKLCGKSPGGTLHARLCQAPRVKAHDTIVHNSVKRATQRILRQYLKTGLVDEDYTPVLGSAGPPGSRRMDIVLPADAFPVTGYDDPTRHLPLMVDVTCFEAQVASRAAKTAADPERCCRDQEAAKTTHYSGHYDQNCYKLATLAIGSFGSIGEQGRKLLEAVATEYASRMSVPGGARPKALKGIALARLRSALSAALHMAAGSTGS 1212

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BLAST of jgi.p|Trimin1|350356 vs. uniprot
Match: A0A835Z654_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z654_9STRA)

HSP 1 Score: 471 bits (1211), Expect = 4.340e-161
Identity = 242/268 (90.30%), Postives = 243/268 (90.67%), Query Frame = 3

Query:    3 KVEADLQQLPQGTQRTQALARFRSQRHMHSIGMAFLNEPMYSTTASFDGLSWQLAVKRAIGVEEQTTGCKLCGKSPGGTLHARLCQAPRVKAHDTIVHNSVKRATQRILRQYLKTGLVDEDYTPFLGSAGPPGSRRMDIVLPADAFPVTGYDDPTRHLPLMVDVTCFEAQVASRAAKTAADPERCCRDQEAAKTTHYSGHYDQNCYKLATLAIGSFGSIGEQGRKLLETVVTECASRMSVPGGARPKALKGIALARLRSALSAALHMA 806
            KVEADLQQLPQ TQRTQALARFRSQRHMHSIGMAFLNEPMYSTTASFDGLSWQLAVKRAIGVEEQT GCKLCGKSPGGTLHARLCQAPRVKAHDTIVHNSVKRATQRILRQYLKTGLVDEDYTPFLGSAGPPGSRRMDIVLPADAFPVTGYDDPTRHLPLMVDVTCF+AQVASRAAKTAADPERCCRDQEAAKTTHYSGHYDQNCYKLATLAIG                       MSVPGGARPKALKGIALARLRSALSAALHMA
Sbjct:  168 KVEADLQQLPQSTQRTQALARFRSQRHMHSIGMAFLNEPMYSTTASFDGLSWQLAVKRAIGVEEQTAGCKLCGKSPGGTLHARLCQAPRVKAHDTIVHNSVKRATQRILRQYLKTGLVDEDYTPFLGSAGPPGSRRMDIVLPADAFPVTGYDDPTRHLPLMVDVTCFKAQVASRAAKTAADPERCCRDQEAAKTTHYSGHYDQNCYKLATLAIG-----------------------MSVPGGARPKALKGIALARLRSALSAALHMA 412

[Close]

BLAST of jgi.p|Trimin1|350356 vs. uniprot
Match: A0A836CGN9_9STRA (Reverse transcriptase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGN9_9STRA)

HSP 1 Score: 497 bits (1280), Expect = 1.320e-159
Identity = 254/268 (94.78%), Postives = 255/268 (95.15%), Query Frame = 3

Query:    3 KVEADLQQLPQGTQRTQALARFRSQRHMHSIGMAFLNEPMYSTTASFDGLSWQLAVKRAIGVEEQTTGCKLCGKSPGGTLHARLCQAPRVKAHDTIVHNSVKRATQRILRQYLKTGLVDEDYTPFLGSAGPPGSRRMDIVLPADAFPVTGYDDPTRHLPLMVDVTCFEAQVASRAAKTAADPERCCRDQEAAKTTHYSGHYDQNCYKLATLAIGSFGSIGEQGRKLLETVVTECASRMSVPGGARPKALKGIALARLRSALSAALHMA 806
            KVEADLQQLPQGTQRTQALARFRSQRHMHSIGMAFLNEPMYSTTASFDGLSWQLAVKRAIGVEEQT GCKLCGKSPGGTLHARLCQAPRVKAHDTIVHNSVKRATQR+LRQYLKTGLVDEDYTPFLG         MDIVLPADAFPVTGYDDPTRHLPLMVDVTCFEAQVASRAAKTAADPERCCRDQEAAKTTHYSGHYDQNCYKLATLAIGSFGSIGEQGRKLLE V TE ASRMSVPGGARPKALKGIALARLRSALSAALHMA
Sbjct:  996 KVEADLQQLPQGTQRTQALARFRSQRHMHSIGMAFLNEPMYSTTASFDGLSWQLAVKRAIGVEEQTAGCKLCGKSPGGTLHARLCQAPRVKAHDTIVHNSVKRATQRLLRQYLKTGLVDEDYTPFLG---------MDIVLPADAFPVTGYDDPTRHLPLMVDVTCFEAQVASRAAKTAADPERCCRDQEAAKTTHYSGHYDQNCYKLATLAIGSFGSIGEQGRKLLEAVATEYASRMSVPGGARPKALKGIALARLRSALSAALHMA 1254

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|350356 vs. uniprot

BLAST of jgi.p|Trimin1|350356 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A835YMX2_9STRA	2.450e-302	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A836CN17_9STRA	1.240e-180	97.76	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835Z458_9STRA	2.530e-180	98.13	Uncharacterized protein (Fragment) n=7 Tax=Tribone...	[more]
A0A835Z9K7_9STRA	2.690e-178	98.51	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A836CK17_9STRA	1.010e-175	96.64	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835Z2F2_9STRA	2.640e-174	96.64	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A836C7Z8_9STRA	7.330e-174	96.64	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835YLG1_9STRA	8.220e-172	96.72	Protein kinase domain-containing protein n=1 Tax=T...	[more]
A0A835Z654_9STRA	4.340e-161	90.30	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A836CGN9_9STRA	1.320e-159	94.78	Reverse transcriptase domain-containing protein n=...	[more]

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_61	contig	Contig_61:392110..394854 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|350356\|estExt_Genemark1.C_Ctg_610042
Hectar predicted targeting category	other localisation
TranscriptId	350678
Track	FilteredModels1
ProteinId	350356

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|350356	gene_8700	Tribonema minus UTEX_B_3156	gene	Contig_61 392110..394854 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|350356	Trimin1\|350356\|estExt_Genemark1.C_Ctg_610042	Tribonema minus UTEX_B_3156	polypeptide	Contig_61 392110..394771 -

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_8700_2	exon_8700_2	Tribonema minus UTEX_B_3156	exon	Contig_61 392110..392629 -
exon_8700_1	exon_8700_1	Tribonema minus UTEX_B_3156	exon	Contig_61 394050..394854 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_8700	CDS_8700	Tribonema minus UTEX_B_3156	CDS	Contig_61 394050..394771 -

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR5_8700	UTR5_8700	Tribonema minus UTEX_B_3156	five_prime_UTR	Contig_61 394772..394854 -

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_61:392110..394854-
coding sequence from alignment at Contig_61:392110..394854-

spliced messenger RNA

>mRNA_8700 ID=mRNA_8700|Name=jgi.p|Trimin1|350356|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1325bp|location=Sequence derived from alignment at Contig_61:392110..394854- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATAAGGTGGAGGCGGACCTGCAACAGCTGCCGCAGGGCACGCAACGCACG
CAAGCACTTGCTCGATTCCGGTCGCAGCGCCACATGCACTCGATCGGCAT
GGCATTCCTCAACGAGCCCATGTACTCCACAACGGCTTCGTTCGACGGCC
TATCCTGGCAACTGGCCGTCAAACGCGCCATCGGAGTAGAGGAACAGACG
ACAGGCTGCAAGCTGTGCGGGAAGTCGCCGGGCGGCACCCTGCATGCACG
GCTATGTCAAGCGCCACGCGTCAAGGCGCACGACACCATCGTCCATAATA
GCGTCAAGAGGGCCACGCAGCGCATCCTGCGGCAATACCTCAAAACGGGA
CTGGTTGACGAGGACTACACGCCGTTTCTGGGGTCCGCCGGGCCGCCGGG
GAGTCGCAGGATGGACATCGTGCTGCCTGCCGACGCCTTCCCGGTGACCG
GCTACGACGACCCGACACGCCACCTACCGCTCATGGTGGACGTTACCTGC
TTCGAGGCACAGGTGGCGTCGCGGGCGGCGAAGACTGCAGCAGACCCTGA
GCGATGCTGCCGCGACCAGGAGGCCGCCAAGACTACCCACTATTCTGGTC
ATTATGATCAGAATTGCTACAAACTTGCCACTTTGGCAATAGGGTCATTT
GGCAGCATCGGGGAGCAGGGGCGGAAGCTGCTGGAGACTGTGGTGACGGA
GTGTGCCAGCAGGATGTCAGTGCCCGGAGGAGCGCGCCCTAAAGCTCTCA
AGGGCATCGCCCTGGCGCGCTTACGCTCGGCACTGTCGGCAGCGCTCCAC
ATGGCCGCCATCGCGTACGGCAACGTCGCTGGCGCCCGCACCCTCCTCGA
GGCCGGCATGGTCGGGGAGGTCTCGTACCTTGATGGCGATGTGCAGCTGC
TGAAACTCGCATACTTTTCCGGGGCGGAGCCTCTGCAATTCGTCCTCGAC
AACATCTGCAGCATCTTTCCACGAGTCCCCCACTACATGCTGGCGACGGT
GGTAGCGCACCTGACCCCCCCGACGTACGATGACGTCTGCTACGAAGACG
GGGCGTACGACCCCCTGGCCCCACGCGTGCACGACGCTGCCGCCATGCAG
GCAGTTCTGCACAGCTTTGACGTGGAAATGAGCTTTGCCAATGCTTGCGC
GCTACGCAAGAGGAAGGAGCCTGTGATCATCATTCAGTGCGCGGTCCGCG
CGGCTCTGGCACGCCGCTGCGCCACCGTACTGCGCCTGCTGCCCGAAAAC
TTGTTTCACAAAGAGCAAGGGCCCAGACGCAGGACTCTGCTCGGGGTAGA
CGAGACATATCAGCACATGCTCTGA

protein sequence of jgi.p|Trimin1|350356

>Trimin1|350356|estExt_Genemark1.C_Ctg_610042 ID=Trimin1|350356|estExt_Genemark1.C_Ctg_610042|Name=jgi.p|Trimin1|350356|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=414bp
MHSIGMAFLNEPMYSTTASFDGLSWQLAVKRAIGVEEQTTGCKLCGKSPG
GTLHARLCQAPRVKAHDTIVHNSVKRATQRILRQYLKTGLVDEDYTPFLG
SAGPPGSRRMDIVLPADAFPVTGYDDPTRHLPLMVDVTCFEAQVASRAAK
TAADPERCCRDQEAAKTTHYSGHYDQNCYKLATLAIGSFGSIGEQGRKLL
ETVVTECASRMSVPGGARPKALKGIALARLRSALSAALHMAAIAYGNVAG
ARTLLEAGMVGEVSYLDGDVQLLKLAYFSGAEPLQFVLDNICSIFPRVPH
YMLATVVAHLTPPTYDDVCYEDGAYDPLAPRVHDAAAMQAVLHSFDVEMS
FANACALRKRKEPVIIIQCAVRAALARRCATVLRLLPENLFHKEQGPRRR
TLLGVDETYQHML*

mRNA from alignment at Contig_61:392110..394854-

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_8700 ID=mRNA_8700|Name=jgi.p|Trimin1|350356|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2745bp|location=Sequence derived from alignment at Contig_61:392110..394854- (Tribonema minus UTEX_B_3156 )
ATAAGGTGGAGGCGGACCTGCAACAGCTGCCGCAGGGCACGCAACGCACG
CAAGCACTTGCTCGATTCCGGTCGCAGCGCCACATGCACTCGATCGGCAT
GGCATTCCTCAACGAGCCCATGTACTCCACAACGGCTTCGTTCGACGGCC
TATCCTGGCAACTGGCCGTCAAACGCGCCATCGGAGTAGAGGAACAGACG
ACAGGCTGCAAGCTGTGCGGGAAGTCGCCGGGCGGCACCCTGCATGCACG
GCTATGTCAAGCGCCACGCGTCAAGGCGCACGACACCATCGTCCATAATA
GCGTCAAGAGGGCCACGCAGCGCATCCTGCGGCAATACCTCAAAACGGGA
CTGGTTGACGAGGACTACACGCCGTTTCTGGGGTCCGCCGGGCCGCCGGG
GAGTCGCAGGATGGACATCGTGCTGCCTGCCGACGCCTTCCCGGTGACCG
GCTACGACGACCCGACACGCCACCTACCGCTCATGGTGGACGTTACCTGC
TTCGAGGCACAGGTGGCGTCGCGGGCGGCGAAGACTGCAGCAGACCCTGA
GCGATGCTGCCGCGACCAGGAGGCCGCCAAGACTACCCACTATTCTGGTC
ATTATGATCAGAATTGCTACAAACTTGCCACTTTGGCAATAGGGTCATTT
GGCAGCATCGGGGAGCAGGGGCGGAAGCTGCTGGAGACTGTGGTGACGGA
GTGTGCCAGCAGGATGTCAGTGCCCGGAGGAGCGCGCCCTAAAGCTCTCA
AGGGCATCGCCCTGGCGCGCTTACGCTCGGCACTGTCGGCAGCGCTCCAC
ATGGCGTACTCTGGCCGTGTCATGACACACATGGCAGAATCCGGGGGGGG
GGGCACATGGAGGAGGACGTAGGGGAGGACCCCGAGATGCCATTTGGCGG
CGGTGGCGTTTGAGTGGTTGTCGTTGCGACACTTTCAGACTGTCATACGA
CATGTAGATTCCTTACAGCTAGATGCCAATCATCTGGGCTTTTTCGCGCC
CTGAGCGAGAATTAATAAAAAGTACACACATACACGGACCGGCTTGCAAA
AAGATCACAACCTGGGAATGGCACGTGCTGCGATTATCCCCTGTCTGAAA
TGTATAACATGCAAGTGTTCCCTGCATGCGGGTCCTGTACGCTGCTAGCA
CCGATGGAGCACCCCTGCGATCTTCAACTGGACTTTGGGAGAGTCGCTGT
TGAAGATTGCGTGGAAAAAAAAAAAAGGTACACAAGGAAAAACATGCCTT
ATTTCTGAAAGTTTGTCAGGGGCCTACCAGCGCTGCCACTTGACACTTAT
ACTGCCCTGGGAAGCATCAATAGCCCTACCATACGTGAACAGTGGTGTGC
CCTGAAAGCTTCCGAAACCGGGACGACGTGACCAGAGGTAAAAAAGCTTT
GTTGAAAGCCTGGACTCAATGTCAACGCTGCTGCACAGCAGTGCTTCACG
CGCTTGCTTCGATTTGTGATCTTGTTTTCGCAGCGCGATTATTCGGTGCA
GATGCACGCCCAAGCATTGTAGGTGCACATACCCTGGCGTTGCGAAAACT
GGCAGTTGCTTGTGAGTGGCGACCTATTTCACCAGGCTATCCGTTGCTGC
ATTGCGCACCTGATTCACATTAACGTTTTTTGCAGGACAGAGAGTCGATG
GACGCCTTCAAAGTCGCCATCATAGCTTGCGAAGTGGAAGCTGCCGCTGG
CGCGCTCATCGGCGCTTCGAATGAATCTTTAAAAGAGGACATGTTATTTG
CGCTTGTGGACGGCAGTGCTGGCATCGATGAGAGCGATCAGAGCTTTGTC
ATTGCGGTTTTGGCAAGAGCGTGGCGGTGCCTACCTCGCGATCTGCGCGG
CTTTGCAGTCGCTGGAGCGGCCAGAGAGAGCAAGTTAAGCTTGAGCGTGC
GCACTGATTGTGCGGTCACGCCCACTTGTGATTGCACCTTTTATTTTATC
TCGCTCAGGGCGCAAAAAAGCCCAGATGAATGGCATCTAACTTGAAGCTT
GCTGTACGGAATCAACTTGTCGTGTGACAGTCTGAAAGTGTCTCAGTGAC
AACCACTCAAACGACAACCTCACGTTCATACTTCATATTGAAGTACGGAT
AAAACCGTATTGTGCACGCTCGTGCAGAACCGGCTGCTCCGCTGGTTGGT
GTGGGCGAGAGGCGCGCGAAAGGTTAGAGCAGAAACTGTAATCTTCAATG
CACTGTCTTTCGGCGCCTTTGCGAGCGCCATCGCGTACGGCAACGTCGCT
GGCGCCCGCACCCTCCTCGAGGCCGGCATGGTCGGGGAGGTCTCGTACCT
TGATGGCGATGTGCAGCTGCTGAAACTCGCATACTTTTCCGGGGCGGAGC
CTCTGCAATTCGTCCTCGACAACATCTGCAGCATCTTTCCACGAGTCCCC
CACTACATGCTGGCGACGGTGGTAGCGCACCTGACCCCCCCGACGTACGA
TGACGTCTGCTACGAAGACGGGGCGTACGACCCCCTGGCCCCACGCGTGC
ACGACGCTGCCGCCATGCAGGCAGTTCTGCACAGCTTTGACGTGGAAATG
AGCTTTGCCAATGCTTGCGCGCTACGCAAGAGGAAGGAGCCTGTGATCAT
CATTCAGTGCGCGGTCCGCGCGGCTCTGGCACGCCGCTGCGCCACCGTAC
TGCGCCTGCTGCCCGAAAACTTGTTTCACAAAGAGCAAGGGCCCAGACGC
AGGACTCTGCTCGGGGTAGACGAGACATATCAGCACATGCTCTGA

Coding sequence (CDS) from alignment at Contig_61:392110..394854-

>mRNA_8700 ID=mRNA_8700|Name=jgi.p|Trimin1|350356|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1242bp|location=Sequence derived from alignment at Contig_61:392110..394854- (Tribonema minus UTEX_B_3156 )
ATGCACTCGATCGGCATGGCATTCCTCAACGAGCCCATGTACTCCACAAC
GGCTTCGTTCGACGGCCTATCCTGGCAACTGGCCGTCAAACGCGCCATCG
GAGTAGAGGAACAGACGACAGGCTGCAAGCTGTGCGGGAAGTCGCCGGGC
GGCACCCTGCATGCACGGCTATGTCAAGCGCCACGCGTCAAGGCGCACGA
CACCATCGTCCATAATAGCGTCAAGAGGGCCACGCAGCGCATCCTGCGGC
AATACCTCAAAACGGGACTGGTTGACGAGGACTACACGCCGTTTCTGGGG
TCCGCCGGGCCGCCGGGGAGTCGCAGGATGGACATCGTGCTGCCTGCCGA
CGCCTTCCCGGTGACCGGCTACGACGACCCGACACGCCACCTACCGCTCA
TGGTGGACGTTACCTGCTTCGAGGCACAGGTGGCGTCGCGGGCGGCGAAG
ACTGCAGCAGACCCTGAGCGATGCTGCCGCGACCAGGAGGCCGCCAAGAC
TACCCACTATTCTGGTCATTATGATCAGAATTGCTACAAACTTGCCACTT
TGGCAATAGGGTCATTTGGCAGCATCGGGGAGCAGGGGCGGAAGCTGCTG
GAGACTGTGGTGACGGAGTGTGCCAGCAGGATGTCAGTGCCCGGAGGAGC
GCGCCCTAAAGCTCTCAAGGGCATCGCCCTGGCGCGCTTACGCTCGGCAC
TGTCGGCAGCGCTCCACATGGCCGCCATCGCGTACGGCAACGTCGCTGGC
GCCCGCACCCTCCTCGAGGCCGGCATGGTCGGGGAGGTCTCGTACCTTGA
TGGCGATGTGCAGCTGCTGAAACTCGCATACTTTTCCGGGGCGGAGCCTC
TGCAATTCGTCCTCGACAACATCTGCAGCATCTTTCCACGAGTCCCCCAC
TACATGCTGGCGACGGTGGTAGCGCACCTGACCCCCCCGACGTACGATGA
CGTCTGCTACGAAGACGGGGCGTACGACCCCCTGGCCCCACGCGTGCACG
ACGCTGCCGCCATGCAGGCAGTTCTGCACAGCTTTGACGTGGAAATGAGC
TTTGCCAATGCTTGCGCGCTACGCAAGAGGAAGGAGCCTGTGATCATCAT
TCAGTGCGCGGTCCGCGCGGCTCTGGCACGCCGCTGCGCCACCGTACTGC
GCCTGCTGCCCGAAAACTTGTTTCACAAAGAGCAAGGGCCCAGACGCAGG
ACTCTGCTCGGGGTAGACGAGACATATCAGCACATGCTCTGA