mRNA_8647 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|350164 vs. uniprot
Match: A0A836CBG2_9STRA (Glycoside hydrolase superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBG2_9STRA) HSP 1 Score: 1016 bits (2627), Expect = 0.000e+0 Identity = 524/524 (100.00%), Postives = 524/524 (100.00%), Query Frame = 1 Query: 1 MAAAGSSGSDYGDGTACCPEGCTSCGASAEECRALGLELSSECCLDVAVAVSCDTSEPPCTLAVSGEGEGAQEALEPVEETAAERELRRRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGHKKELRTYQGPQGSPDPYCNAGFVDEDVQYCCPQGCSRCSNALTCPNFSDQEEPKCCGAAIAQSDRPCDRYGAPCILNAARFDPKNPGNPVRNARVGVWLSGDLDTVLPQREDKYGIKFDSVVLYQTMDTAGWDYVASVLDKGVDVELVMEFMDNYPNLRDIANGKFDSKMRDFGKAAAADGRRIYLRPLHELNSAWYNWGVFRPGNSVSDFRNAFKRIVSTFRSTGANFKYQMSFAAKNSDKETTPFEDFYVGDEYVDQVCVSAYNSCGTGTYRENKSLPEIINTFYWQMQAITKRTMCIAEMSSTNHCGGKATWIKDTWATLARDYPKIVSVNWFFEDKMNVGKDWDLHSPDEISAFVNGYHNFESITKRRLLQEQQGGLGEDDSFNAEQEELQPRMAALL 1572 MAAAGSSGSDYGDGTACCPEGCTSCGASAEECRALGLELSSECCLDVAVAVSCDTSEPPCTLAVSGEGEGAQEALEPVEETAAERELRRRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGHKKELRTYQGPQGSPDPYCNAGFVDEDVQYCCPQGCSRCSNALTCPNFSDQEEPKCCGAAIAQSDRPCDRYGAPCILNAARFDPKNPGNPVRNARVGVWLSGDLDTVLPQREDKYGIKFDSVVLYQTMDTAGWDYVASVLDKGVDVELVMEFMDNYPNLRDIANGKFDSKMRDFGKAAAADGRRIYLRPLHELNSAWYNWGVFRPGNSVSDFRNAFKRIVSTFRSTGANFKYQMSFAAKNSDKETTPFEDFYVGDEYVDQVCVSAYNSCGTGTYRENKSLPEIINTFYWQMQAITKRTMCIAEMSSTNHCGGKATWIKDTWATLARDYPKIVSVNWFFEDKMNVGKDWDLHSPDEISAFVNGYHNFESITKRRLLQEQQGGLGEDDSFNAEQEELQPRMAALL Sbjct: 1 MAAAGSSGSDYGDGTACCPEGCTSCGASAEECRALGLELSSECCLDVAVAVSCDTSEPPCTLAVSGEGEGAQEALEPVEETAAERELRRRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGHKKELRTYQGPQGSPDPYCNAGFVDEDVQYCCPQGCSRCSNALTCPNFSDQEEPKCCGAAIAQSDRPCDRYGAPCILNAARFDPKNPGNPVRNARVGVWLSGDLDTVLPQREDKYGIKFDSVVLYQTMDTAGWDYVASVLDKGVDVELVMEFMDNYPNLRDIANGKFDSKMRDFGKAAAADGRRIYLRPLHELNSAWYNWGVFRPGNSVSDFRNAFKRIVSTFRSTGANFKYQMSFAAKNSDKETTPFEDFYVGDEYVDQVCVSAYNSCGTGTYRENKSLPEIINTFYWQMQAITKRTMCIAEMSSTNHCGGKATWIKDTWATLARDYPKIVSVNWFFEDKMNVGKDWDLHSPDEISAFVNGYHNFESITKRRLLQEQQGGLGEDDSFNAEQEELQPRMAALL 524
BLAST of jgi.p|Trimin1|350164 vs. uniprot
Match: A0A835Z777_9STRA (GH26 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z777_9STRA) HSP 1 Score: 416 bits (1070), Expect = 4.530e-130 Identity = 241/451 (53.44%), Postives = 303/451 (67.18%), Query Frame = 1 Query: 100 ALGLELSSECCLDVAVAVSCDTS-EPPCTLAVSGEGEGAQEALEPVEE-----TAAERELRRRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGHKKELRTYQGPQG--SPDPYCNAGFVDEDVQYCCPQGCSRCSNALTCPNFSDQEEPKCCGAAIAQSDRPCDRYGAPCILNAARFDPKNPGNPVRNARVGVWLSGDLDTVLPQREDKYGIKFDSVVLYQTMDT-AGWDYVASVLDKGVDVELVMEFMDNYPNLRDIANGKFDSKMRDFGKAAAADGRRIYLRPLHELNSAWYNWGVFRPGNSVSDFRNAFKRIVSTFRSTGANFKYQMSFAAKNSDKETTPFEDFYVGDEYVDQVCVSAYNSCGTGTYRENKSLPEIINTFYWQMQAIT-KRTMCIAEMSSTNHCGG-KATWIKDTWATLARDYPKIVSVNWFFEDKM--NVGKDWDL 1413 AL L+ SSECC+D +C + PC++ + GE E L+P E T +RELR+RRXXXXXXXXXXXXXXXXXXXXXX G K + + PQG + DP+C G +D+DVQYCCP CSRCSN+ TC NFS EEP CCGA IA S RPC + APC L+ +F PG+ R A VG W +G D LPQ+E G+K D+V++Y + W V+ +LD V+LVMEF D+YPNLRD+ +GK+D ++DFGK A ADGR++ +RPLHELN WYNW R GN+ DF AF+ +V+T RSTG NFK+Q+S+AAKNS + PF+DFY GD YVDQ+CVSAYN+CGTGTY+ NKS EIINT+Y+Q+ A +++CIAEMS+T+ CG KA WI D W +LA DYPK SVNWFFE K + KDW L Sbjct: 167 ALLLDASSECCVDADSLPACSADGKAPCSMQLIGE---VAEQLQPEEGDDADLTEEQRELRKRRXXXXXXXXXXXXXXXXXXXXXX-------GKKPKPKPPVKPQGGGAGDPFCLNGMLDDDVQYCCPSNCSRCSNSKTCTNFSPAEEPTCCGAMIADSGRPCGLFPAPCYLDQTKFQ-NAPGSSKRTANVGAWFAGGPDA-LPQQEQNLGVKLDTVMMYLPVGPDLKWSAVSDILDTKRQVQLVMEFYDSYPNLRDVKSGKYDQYLKDFGKDAKADGRQLTIRPLHELNGDWYNWDALRNGNNAEDFPGAFQHVVTTLRSTGGNFKFQISYAAKNSAESNMPFKDFYPGDSYVDQICVSAYNTCGTGTYKSNKSFSEIINTWYFQVTAFAPSKSLCIAEMSTTDQCGSDKAQWITDAWHSLADDYPKFTSVNWFFESKKLGSAYKDWAL 605
BLAST of jgi.p|Trimin1|350164 vs. uniprot
Match: A0A836C8I3_9STRA (Glycoside hydrolase superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8I3_9STRA) HSP 1 Score: 325 bits (834), Expect = 9.310e-100 Identity = 171/419 (40.81%), Postives = 228/419 (54.42%), Query Frame = 1 Query: 418 CNAGFVDEDVQYCCPQGCSRCSNALTCPNFSDQEEPKCCGAAIAQSDRPCDRYGAPCILNAARFDPKNPGNPVRNARVGVWLSGDLDTVLPQREDKYGIKFDSVVLYQTMDTAGWDYVASVLDKGVDVELVMEFMDNYP---NLRDIANGKFDSKMRDFGKAAAADGRRIYLRPLHELN----------------------SAWYNWGVFRPGNSVSDFRNAFKRIVSTFRSTGANFKYQMSFAAKNSDKETTPFEDFYVGDEYVDQVCVSAYNSCGTGTY-RENKSLPEIINTFYWQMQAITKRTMCIAEMSSTNHCGGKAT------------------------------------WIKDTWATLARDYPKIVSVNWFFEDKMNVGKDWDLHSPDEISAFVNGYHNFESITKRRLL 1488 C V ED +YCC C CS++ +C F + KCCGA I + R C+ APC + +RF PG R+ VGVW GD + +E + + F +L+ + WDY+AS LD VELVMEF + P NL+D+ GK+D+ ++DFG+AAA DGRRI +R LHELN WY WG F PGNS A+K VS RSTGANFKYQ+S+ A+N+ +TP + F+ GDEYVD+VCV+AYN+CGT + R SL I+NT+Y Q+ A T + +CI+E+SST+HCGGK W+ W LA YP++ S+NWFFEDK+NV KDWDLH+ E SA++ GY FE+ T R + Sbjct: 71 CVLNDVREDTRYCCHVSCDVCSDSRSCARFPKNQISKCCGAHIKDNGRSCETGQAPCNVKKSRFSGNGPGTVKRDTSVGVWPGGDPKDGVKAKEKELHMHFGHQLLFADVRNLDWDYIASFLDGNRAVELVMEFNSDTPFTANLKDVIGGKYDTDLKDFGRAAAKDGRRITVRLLHELNVFKYKRQGNXXXXXXXXXXXXXGDWYPWGAFTPGNSPEKLVTAYKHAVSLLRSTGANFKYQLSYNARNAGGNSTPLKAFWPGDEYVDEVCVAAYNTCGTSSNPRMTLSLTAIMNTWYKQITAFTTKKICISEISSTSHCGGKVRAKVNCEVAAGALEIKEVPIDSLANEVNAYAMCDMPEWLLAAWKDLANKYPRVDSINWFFEDKLNVKKDWDLHTSAEKSAWIKGYKAFEAATTGRKV 489
BLAST of jgi.p|Trimin1|350164 vs. uniprot
Match: A0A835ZDK0_9STRA (Glycoside hydrolase superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDK0_9STRA) HSP 1 Score: 308 bits (790), Expect = 1.620e-93 Identity = 158/314 (50.32%), Postives = 208/314 (66.24%), Query Frame = 1 Query: 613 PKNPGNPVRNARVGVWLSGDLDTVLPQREDKYGIKFDSVVLYQTMDTAGWDYVASVLDKGVDVELVMEFMDNYPNLRDIANGKFDSKMRDFGKAAAADGRRIYLRPLHELNSAWYNWGVFRPGNSVSDFRNAFKRIVSTFRSTGANFKYQMSFAAKNSDKETTPFEDFYVGDEYVDQVCVSAYNSCGTGTYRENKSLPEIINTFYWQMQAITKRTMCIAEMSSTNHCGGKATWIKDTWATLARDYPKIVSVNWFFEDKMNV-GKDWDLHSPDEISAFVNGYHNFESITK-RRLLQEQQGGLGEDDSFNAEQEEL 1548 P PG+ RN+RVGV LSG +V QRE Y ++FDS ++YQ++ W V +VLD V+ VMEF D NLR IA G +D ++ FGKAA DGR I +RPLHE+N WY W VF PGNS+SDF+NAFKR+VS +STG NFK+Q+S+AA+N+ PF DFY GD YVD VCVSAYN CG TY ENK L E + +Y +M + CIAEMSST C GK WIKD+W TL Y K ++NWFF++K+++ G+DWDL+S +++AFV+G+ F+S T RRL + + GE+ F ++ L Sbjct: 178 PPPPGSVKRNSRVGV-LSGPRMSV-QQREKAYKVRFDSELMYQSVTDLDWGKVKAVLDDKKGVDFVMEFGDEGSNLRSIAQGAYDHYLQTFGKAAKKDGRTINVRPLHEMNGEWYPWCVFTPGNSLSDFKNAFKRVVSVLKSTGGNFKFQLSYAAQNASGHKNPFMDFYPGDAYVDAVCVSAYNLCGA-TYDENKPLAESLLPWYAEMSRSVNKPFCIAEMSSTGFCNGKDQWIKDSWKTLTYQYTKFNNINWFFQNKVDLLGRDWDLNSRADVNAFVSGFRMFKSATGGRRLFADIEPAEGEEADFEVAEDAL 488
BLAST of jgi.p|Trimin1|350164 vs. uniprot
Match: A0A835ZA06_9STRA (Glycoside hydrolase superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZA06_9STRA) HSP 1 Score: 298 bits (764), Expect = 1.210e-92 Identity = 139/262 (53.05%), Postives = 183/262 (69.85%), Query Frame = 1 Query: 733 LYQTMDTAGWDYVASVLDKGVDVELVMEFMDNYPNLRDIANGKFDSKMRDFGKAAAADGRRIYLRPLHELNSAWYNWGVFRPGNSVSDFRNAFKRIVSTFRSTGANFKYQMSFAAKNSDKETTPFEDFYVGDEYVDQVCVSAYNSCGTGTYRENKSLPEIINTFYWQMQAITKRTMCIAEMSSTNHCGGKATWIKDTWATLARDYPKIVSVNWFFEDKMNVGKDWDLHSPDEISAFVNGYHNFESITKRRLLQEQQGGLGED 1518 +Y + W YVAS +D V+LV+EF+D NL+ IA+G +DSK+R FGK AA DGR+IY+R LHE+N WYNW F N+V DF+NA+K V+ RSTGAN K+QMS+AA N+ K+ TPF+DFYVGDEYVDQVC SAYN CG TY +NKSL ++ FY ++Q TKR +CIAEMSST C GK WI TW +LA + ++ ++NWFFE+K N+G+DWDL++ +I AF +GY F +T RRL + G E+ Sbjct: 1 MYLPVTDLKWSYVASKIDAYGKVQLVIEFIDQGANLKKIASGAYDSKLRAFGKDAAKDGRQIYVRMLHEMNGDWYNWCAFFGDNTVGDFKNAYKHAVTVLRSTGANIKFQMSYAANNASKKKTPFKDFYVGDEYVDQVCTSAYNQCGA-TYPKNKSLEDVFGDFYTEVQTFTKRPICIAEMSSTGICKGKPAWISATWKSLATKFTRVSTINWFFENKKNLGRDWDLNTKADIHAFTSGYRLFRKVTGRRLEAIESGASAEE 261
BLAST of jgi.p|Trimin1|350164 vs. uniprot
Match: A0A835YSW1_9STRA (Glycoside hydrolase superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSW1_9STRA) HSP 1 Score: 298 bits (763), Expect = 2.370e-89 Identity = 145/358 (40.50%), Postives = 215/358 (60.06%), Query Frame = 1 Query: 409 DPYCNAGFVDEDVQYCCPQGCSRCSNALTCPNFSDQEEPKCCGAAIAQSDRPCDRYGAPCILNAARFDPKNPGNPVRNARVGVWLSGDLDTVLPQREDKYGIKFDSVVLYQTMDTAGWDYVASVLDKGVDVELVMEFMDNYPNLRDIANGKFDSKMRDFGKAAAADGRRIYLRPLHELNSAWYNWGVFRPGNSVSDFRNAFKRIVSTFRSTGANFKYQMSFAAKNSDKETTPFEDFYVGDEYVDQVCVSAYNSCGTGTYRENKSLPEIINTFYWQMQAIT-KRTMCIAEMSSTNHCGGKATWIKDTWATLARDYPKIVSVNWFFEDK-MNVGKDWDLHSPDEISAFVNGYHNFESITK 1476 DPYC G + + CC GC+ C ++ + + CC + IA++ R CD + P + +W RE KY +KFDSV+LY + W +V + LDKG V+LV+EF+DNY NL D+A GK+D ++ FG A ADGR IYLRPLHE N WY WG+FR GNS+ F+ A++ +++ R+TG NFKYQ+S+ K+++ T F DFYVGD+Y+ Q+CVSAYN G Y +++SL I+ Y Q ++ + +C+AEMS+T++ G K WI DTW +LA + + ++NWF E+K ++V DWDL++P ++ A+V+GY NF++ TK Sbjct: 196 DPYCLKGVLHPNGAQCCKAGCTTCGSSRCA--YDALGKDACCSSVIAKNGRSCDYFPGP--------------------QQSIW----------SREAKYKMKFDSVLLYLPVQYLSWSWVKTFLDKGTGVQLVIEFIDNYSNLSDVAAGKYDGYLKKFGAFAKADGRLIYLRPLHEFNGDWYPWGIFREGNSLDAFKAAYRHVITVLRATGGNFKYQLSYNVKSANSNPTKFSDFYVGDDYL-QICVSAYNMAGA-RYPDSRSLATILGYAYAQFESFAPSKPLCLAEMSTTSYGGDKPLWITDTWKSLAYQFTAVTTINWFLENKNVDVNVDWDLNTPADVKAWVDGYWNFKTATK 519
BLAST of jgi.p|Trimin1|350164 vs. uniprot
Match: A0A835ZP96_9STRA (Glycoside hydrolase superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZP96_9STRA) HSP 1 Score: 294 bits (752), Expect = 9.340e-89 Identity = 146/308 (47.40%), Postives = 202/308 (65.58%), Query Frame = 1 Query: 637 RNARVGVWLSGDLDTVLPQREDKYGIKFDSVVLYQTMDTAGWDYVASVLDKGVDVELVMEFMDNYP-NLRDIANGKFDSKMRDFGKAAAADGRRIYLRPLHELNSAWYNWGVFRPGNSVSDFRNAFKRIVSTFRSTGANFKYQMSFAAKNSDKETTPFEDFYVGDEYVDQ---------VCVSAYNSCGTGTYRENKSLPEIINTFYWQMQAITKRTMCIAEMSSTNHCGGKATWIKDTWATLARDYPKIVSVNWFFEDKMNVGKDWDLHSPDEISAFVNGYHNFESIT---KRRLLQEQQGGLGEDD 1521 R +G+ LSG T + QRE Y +KFD+V++Y + W YVA+ L+ V+LV+EF D+ NL+ IA+G +D + FG+ A DGRRIY+RPLHE N WY WGV+ PGN++ DFRNA+KRI+S +ST AN K+QMSFAAKN+ K+ PF+DF+VG+EYVDQ +CV++YN CG TY +N+ L +I+ TFY + TKR +CIAE+SST C GK W+K +W +LA D+ ++ +VNWFFE+K ++ +DWDL+S ++ A+V GYH F T R LL DD Sbjct: 83 RKTTIGL-LSGPQKT-MKQREKSYKVKFDAVMMYLPIQDLQWRYVANQLNDKKSVQLVIEFFDSGSGNLKKIASGAYDKYLIKFGRDAKKDGRRIYVRPLHEFNGDWYPWGVYYPGNNIKDFRNAYKRIISVLKSTRANLKFQMSFAAKNATKKKVPFKDFFVGNEYVDQASHRLKFKSLCVTSYNQCGA-TYPKNRPLKKILKTFYSSVTKFTKRPLCIAEISSTGICKGKPYWLKQSWRSLAYDFNRVTTVNWFFENKKSLHRDWDLNSKADVKAWVQGYHAFAKATGHKSRALLDSPDATANNDD 387
BLAST of jgi.p|Trimin1|350164 vs. uniprot
Match: A0A836CCT0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCT0_9STRA) HSP 1 Score: 308 bits (789), Expect = 1.950e-86 Identity = 156/343 (45.48%), Postives = 214/343 (62.39%), Query Frame = 1 Query: 454 CCPQGCSRCSNALTCPNFSDQEEPKCCGAAIAQSDRPCDRYGAPCILNAARFDPKNPGNPVRNARVGVWLSGDLDTVLPQREDKYGIKFDSVVLYQTMDTAGWDYVASVLDKGVDVELVMEFMDNYPNLRDIANGKFDSKMRDFGKAAAADGRRIYLRPLHELNSAWYNWGVFRPGNSVSDFRNAFKRIVSTFRSTGANFKYQMSFAAKNSDKETTPFEDFYVGDEYVDQVCVSAYNSCGTGTYRENKSLPEIINTFYWQMQAITK-RTMCIAEMSSTNHCGGKATWIKDTWATLARDYPKIVSVNWFFEDKMN-VGKDWDLHSPDEISAFVNGYHNFESITK 1476 CC GCS+C C N E CC IA CD G PC++N + +P R V V LSG ++ L RE Y + FD +++Y + W ++ LD G +V+LV+EF+D+Y NL D+A GK+D + FG+AAA DGR I +RPLHE N WY WG R GNS+ DF AFK +V+T R+TGANFKYQ S+A KN++ + TP ++YVGD+YVDQVCVSAYN CG +Y NK L + +FY+Q+ + +T CIAEMSST HC GK W+ DTW +LA + ++ +NWF E+K++ + +DWDL+S ++ A+V GY+ FE K Sbjct: 951 CCSGGCSKCGKP-DCANDPLGAE-HCCPQVIAAEALSCDIAGPPCLVNTDKPIVIDPTAVRRKTSVQV-LSGS-ESSLEDREGHYHMTFDGILVYLPVQNLNWKWIVGFLDAGRNVDLVIEFVDSYSNLADVAAGKYDRFLGKFGQAAADDGRVINIRPLHEFNGDWYPWGALRQGNSMQDFLLAFKHVVTTLRATGANFKYQQSYAMKNANNDPTPLSEWYVGDDYVDQVCVSAYNLCGV-SYPTNKPLASMYGSFYYQVLSFAPTKTQCIAEMSSTGHCEGKPQWLLDTWRSLAYQFTRVTVINWFLENKIDSLNRDWDLNSKADVEAWVEGYNEFEKGQK 1288
BLAST of jgi.p|Trimin1|350164 vs. uniprot
Match: A0A835ZCD2_9STRA (Glycoside hydrolase superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCD2_9STRA) HSP 1 Score: 285 bits (729), Expect = 2.900e-86 Identity = 148/365 (40.55%), Postives = 223/365 (61.10%), Query Frame = 1 Query: 403 SPDPYCNAGFVDEDVQYCCPQGCSRCSNALTCPNFSDQEEPKCCGAAIAQSDRPCDRYGAPCILNAARF-DPKNPGNPV---RNARVGVWLSGDLDTVLPQREDKYGIKFDSVVLYQTMDTAGWDYVASVLDKGVDVELVMEFMDNYPNLRDIANGKFDSKMRDFGKAAAADGRRIYLRPLHELNSAWYNWGVFRPGNSVSDFRNAFKRIVSTFRSTGANFKYQMSFAAKNSDKETTPFEDFYVG-DEYVDQVCVSAYNSCGTGTYRENKSLPEIINTFYWQMQAITKRTMCIAEMSSTNHCGGKATWIKDTWATLARDYPKIVSVNWFFEDKMNV-GKDWDLHSPDEISAFVNGYHNFESITKR 1479 S DPYC++G + CC + C+ C E CC I S+ C++YG PCI++ RF +P P +P RN+ VGV L+G D + +RE +YG+ FD+ ++YQ + + Y+ V++ G V+LV+E DN N IA+G +D+++ +FG AAA GR+I R LHE+N WY W F PGNS+ F AF R+V+ R +GA+ K Q+++AA+N+ PF DF+ +YVD+VCVSAYN CG Y ENK L +I+ +Y Q+ T +CIAEMSST HC GK WI D W T+ ++ ++ ++NWFFE+K+++ +D+DL++ ++ FV+G++NF+ T R Sbjct: 11 SGDPYCSSGKL-YGAGICCSEACAACGTQNDGCASDAAGEGSCCADVITASELSCNQYGPPCIIDEERFAEPSTPADPWSIHRNSVVGV-LTGP-DKTVAEREAQYGMTFDAELIYQNVLYLNFTYLQDVMESGKKVQLVIEINDNLAN---IASGTYDTQLYNFGLEAAAYGRKISTRILHEINGDWYPWCAFAPGNSIDQFYEAFVRVVNALRGSGADLKIQLAYAAQNAAGYDNPFIDFFEPIKDYVDEVCVSAYNLCGD-KYSENKPLRDIMGEWYKQVTWFTDLPICIAEMSSTGHCEGKPAWIADAWDTITNEFTQVRTINWFFENKIDLLNRDYDLNTSSDVQQFVDGFNNFKYATSR 368
BLAST of jgi.p|Trimin1|350164 vs. uniprot
Match: A0A835Z8N1_9STRA (Glycoside hydrolase superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8N1_9STRA) HSP 1 Score: 265 bits (677), Expect = 4.170e-78 Identity = 139/373 (37.27%), Postives = 212/373 (56.84%), Query Frame = 1 Query: 409 DPYCNAGFVDEDVQYCCPQGCSRCSNALTCPNFSDQEEPKCCGAAIAQSDRPCDRYGAPCILNAARFDPKNPGNPVRNARVGVWLSGDLDTVLPQREDKYGIKFDSVVLYQTMDTAGWDYVASVLDKGVDVELVMEFMDNYPNLRDIANGKFDSKMRDFGKAAAADGRRIYLRPLHELNSAWYNWGVFRPG----NSVSDFRNAFKRIVSTFRSTGANFKYQMSFAAKNSDKETTPFEDFYVGDEYVDQVCVSAYNSCGTGTYRENKSLPEIINTFYWQMQAITKRTMCIAEMSSTNHCGGKATWIKDTWATLARDYPKIVSVNWFFEDKMNVGKDWDLHSPDEISAFVNGYHNFESITKRRLLQEQQGGLGE 1515 DP C G +++D CC + C +C C F+ CC I +++ C +Y APC++ A PK R VGV G T L RE +YG+K DS++++Q + +D+VA+ +++G V+LV+EF +L+DIA G D + DF A DGR+ Y+RPLHE N WY WG++ G + +SDF+ A+K IV+ FR+ A ++Q + N + TPF++FYVGD+YVD VC S YN G + + ++ FY QM T + +CI+EMS+T++ K WIKDTW+++A + +I +VNWF E+K + +WDL++ E A++NG ++F S T R Q G G+ Sbjct: 51 DPACANGILNKDGSVCCTKPCGQCGGT-GCNTFTGGSS-NCCAGPIRTANKSCTQYAAPCVMGATSGTPKPT---TRKTMVGVQPGG---TPLGTREGQYGVKVDSLLMFQKVTDLHFDWVATEMNRGHTVQLVLEFFGT--SLKDIAAGGSDGVLSDFANKAKTDGRQFYIRPLHEFNGDWYPWGIYVDGTLHTDLLSDFKAAYKHIVTIFRNAKAPVQFQQGYNNSNPRDDKTPFKNFYVGDDYVDMVCFSLYNFAGIPNHSSG-TFTKLAGDFYNQMTLATSKDLCISEMSTTSYGVDKPAWIKDTWSSIANQFTRITTVNWFLENKPD--GNWDLNNGPEQQAWINGLNSFRSTTAVRRAALQLGAPGD 410 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|350164 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_8647 ID=mRNA_8647|Name=jgi.p|Trimin1|350164|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2115bp|location=Sequence derived from alignment at Contig_57:735098..739040- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGGCTGCTGCTGGCAGCAGTGGCAGCGACTACGGAGACGGCACGGCCTGback to top protein sequence of jgi.p|Trimin1|350164 >Trimin1|350164|estExt_Genemark1.C_Ctg_570097 ID=Trimin1|350164|estExt_Genemark1.C_Ctg_570097|Name=jgi.p|Trimin1|350164|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=525bp MAAAGSSGSDYGDGTACCPEGCTSCGASAEECRALGLELSSECCLDVAVAback to top mRNA from alignment at Contig_57:735098..739040- Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_8647 ID=mRNA_8647|Name=jgi.p|Trimin1|350164|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=3943bp|location=Sequence derived from alignment at Contig_57:735098..739040- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_57:735098..739040- >mRNA_8647 ID=mRNA_8647|Name=jgi.p|Trimin1|350164|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1575bp|location=Sequence derived from alignment at Contig_57:735098..739040- (Tribonema minus UTEX_B_3156 )back to top |