mRNA_8640 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|168388 vs. uniprot
Match: A0A835YP39_9STRA (Glycoside hydrolase superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YP39_9STRA) HSP 1 Score: 932 bits (2410), Expect = 0.000e+0 Identity = 458/458 (100.00%), Postives = 458/458 (100.00%), Query Frame = 1 Query: 1 MCDDASDVSSEDGTRSLQSLVADANRGRRRQLHVGTAIMPHLLDDLKYEAVANEHFDHVVCEHHHKWEPLLAKRADGTEVYDFTQSDRIVDWARRGGNKVKGHTLVWHVTSPKWIEEAPQARLREAVFEHIKTTMNHCLGKVYAWDVVNEPLHPDATGRLADTPFLRKLGPAYIDDCFRVAHHTDPNAVLILNENKGEGAGLPRGRSAKADALFALSRDLLARGVPLHEVGLQAHFDAAGTGQRRVPTPHSVARNIARFGDLGLGVNISEMDVRAAGLEQVGLGLAQRDAAAAAVFHDTLAAALAQPAFTGVTFWGFCDAHSWCHDFYKCVDRPLLWDAAWRPKPALAAVRRALRGAACSENGLRNAEAAAAAAEGAAEQDPDAFSTAAFGSEELWGSDWMLPEPVEGGAGGTGAGPVAGVSVDEPDWSAGQRYVDVTANVTAHVTARPQPAVHESNR 1374 MCDDASDVSSEDGTRSLQSLVADANRGRRRQLHVGTAIMPHLLDDLKYEAVANEHFDHVVCEHHHKWEPLLAKRADGTEVYDFTQSDRIVDWARRGGNKVKGHTLVWHVTSPKWIEEAPQARLREAVFEHIKTTMNHCLGKVYAWDVVNEPLHPDATGRLADTPFLRKLGPAYIDDCFRVAHHTDPNAVLILNENKGEGAGLPRGRSAKADALFALSRDLLARGVPLHEVGLQAHFDAAGTGQRRVPTPHSVARNIARFGDLGLGVNISEMDVRAAGLEQVGLGLAQRDAAAAAVFHDTLAAALAQPAFTGVTFWGFCDAHSWCHDFYKCVDRPLLWDAAWRPKPALAAVRRALRGAACSENGLRNAEAAAAAAEGAAEQDPDAFSTAAFGSEELWGSDWMLPEPVEGGAGGTGAGPVAGVSVDEPDWSAGQRYVDVTANVTAHVTARPQPAVHESNR Sbjct: 1 MCDDASDVSSEDGTRSLQSLVADANRGRRRQLHVGTAIMPHLLDDLKYEAVANEHFDHVVCEHHHKWEPLLAKRADGTEVYDFTQSDRIVDWARRGGNKVKGHTLVWHVTSPKWIEEAPQARLREAVFEHIKTTMNHCLGKVYAWDVVNEPLHPDATGRLADTPFLRKLGPAYIDDCFRVAHHTDPNAVLILNENKGEGAGLPRGRSAKADALFALSRDLLARGVPLHEVGLQAHFDAAGTGQRRVPTPHSVARNIARFGDLGLGVNISEMDVRAAGLEQVGLGLAQRDAAAAAVFHDTLAAALAQPAFTGVTFWGFCDAHSWCHDFYKCVDRPLLWDAAWRPKPALAAVRRALRGAACSENGLRNAEAAAAAAEGAAEQDPDAFSTAAFGSEELWGSDWMLPEPVEGGAGGTGAGPVAGVSVDEPDWSAGQRYVDVTANVTAHVTARPQPAVHESNR 458
BLAST of jgi.p|Trimin1|168388 vs. uniprot
Match: A0A6H5JAF9_9PHAE (GH10 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JAF9_9PHAE) HSP 1 Score: 388 bits (997), Expect = 4.930e-129 Identity = 215/430 (50.00%), Postives = 263/430 (61.16%), Query Frame = 1 Query: 22 VSSEDGTR-SLQSLVADANRGRRRQLHVGTAIMPHLLDDL--KYEAVANEHFDHVVCEHHHKWEPLLAKRADGTEVYDFTQSDRIVDWARRGGNKVKGHTLVWHVTSPKWIEEAPQARLREAVFEHIKTTMNHCLGKVYAWDVVNEPLHPDATGRLADTPFLRKLGPAYIDDCFRVAHHTDPNAVLILNENKGEGAGLPRGRSAKADALFALSRDLLARGVPLHEVGLQAHFDAAGTGQRRVPTPHSVARNIARFGDLGLGVNISEMDVRAAGLEQVGLGLAQRDAAAAAVFHDTLAAALAQPAFTGVTFWGFCDAHSWCHDFYKCVDRPLLWDAAWRPK-PALAAVRRALRGAACSENGLRNAEAAAAAAEGAAEQDPDAFSTAAFGSEELWGSDWMLPEPVEGGAGGTG---AGPVAGVSVDEPDWSA 1290 + +EDG SL+ A R++++HVG AIMP L+ Y AV N F+ VV EHH KW+PLL +G VYDF D+IVDWA G +VKGHTL WHVT+P + E+ +RLREA++ HI+TTM H G+V +WDVVNE L D +GR+ D FLRKLGP Y+DDCFRVAH DPNA LI N+NK EGAGL GRS KADA++ + + + RGVP+H GLQ HF AAGTG RR PTPHSV R + R G+LGL VNISEMDVR AGL G + A AA++ D L A L + AF G+T WGF D HSW H FY+ D PL WD ++PK P + A+R AL LR A S E LWG DWM+PEP GAG G G G +VD P+W+A Sbjct: 4 IMNEDGLEGSLREAAARCGNARKKKVHVGAAIMPDYLNQHYDPYSAVLNREFNSVVIEHHMKWKPLLVGGDEG--VYDFRPCDKIVDWAIDKGMEVKGHTLCWHVTTPDFAEDMSASRLREALYRHIRTTMGHFYGRVGSWDVVNEALSQDCSGRMEDNVFLRKLGPGYVDDCFRVAHQIDPNAKLIYNDNKAEGAGLSGGRSRKADAMYDMLKGMKERGVPVHGAGLQGHFTAAGTGMRRTPTPHSVQRQVRRLGELGLSVNISEMDVRVAGLPDGVDG----ETAQAAIYGDILEACLTEEAFDGLTLWGFTDLHSWVHSFYE-PDSPLPWDKEFQPKKPVVGAMRDAL---------LRTR----------------ASSPVLATPEHLWGKDWMVPEPTNDGAGAGGHTDGGGGEGDAVDAPNWNA 401
BLAST of jgi.p|Trimin1|168388 vs. uniprot
Match: A0A1Z5K0F7_FISSO (GH10 domain-containing protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K0F7_FISSO) HSP 1 Score: 277 bits (709), Expect = 5.620e-86 Identity = 159/389 (40.87%), Postives = 225/389 (57.84%), Query Frame = 1 Query: 88 RQLHVGTAIMPHLLD-DLKYEAVANEHFDHVVCEHHHKWEPLLAK-RADGTEV-----YDFTQSDRIVDWARRGGNKVKGHTLVWHVTSPKWIEEAPQARLREAVFEHIKTTMNHCLGKVYAWDVVNEPLHPDATGRLADTPFLRKLGPAYIDDCFRVAHHTDPNAVLILNENKGEGAGLPRGRSAKADALFALSRDLLARGVPLHEVGLQAHFDAAGTGQRRVPTPHSVARNIARFGDLGLGVNISEMDVRAAGLEQVGLG-LAQRDAAAAAVFHDTLAAALAQPAFTGVTFWGFCDAHSWCHDFYKCVDRPLLWDAAWRPKPALAAVRRALRGAACSE---NGLRNAEAAAAAAEGAAEQDPDAFSTAAFGSEELWGSDWMLPEPVE 1221 + + +GTA++P L + Y A F+ +V EH KW PLL + + D ++ YDFTQ+D +V+WA + KVKGH LVWHVTSP +++ +LRE + HI T M + G++ WDVVNE L PD G LA+ FL+KLGP+YI+ CFR AH DP+AVL+ N+NK E P+G DA + L DL A+ VP+H G+Q HF+AAGTG+ R PTP + + I R GDLGL VN+SE+DVR + LE L +AQ+ ++HD + AAL++P+ G+ WGF D H+W FY D+PL++D ++ KP+ A+R A+ NG+ E+D + WG +WM PEP + Sbjct: 25 KHIDIGTAVLPQPLQAESLYAATLQREFNAIVVEHDLKWGPLLGEGQNDLNDIKCLGQYDFTQADIVVNWALQHDKKVKGHVLVWHVTSPPCLQQLTAEQLREHLQRHIYTVMGYFRGRIRTWDVVNEALAPD--GSLAENIFLQKLGPSYIEKCFRWAHQADPDAVLLYNDNKVEAIDTPKG-----DAFYHLLADLKAKQVPIHGCGMQGHFNAAGTGRNRPPTPRMLKQQIRRLGDLGLTVNLSEVDVRTSRLENPVLETVAQKQ-----IYHDLVVAALSEPSCDGIWLWGFSDKHTWVSHFYY-DDQPLIFDEDYQQKPSYYALREAIASFGVGSVVGNGVL------------LEEDVNVHGN-------TWGHEWMQPEPED 381
BLAST of jgi.p|Trimin1|168388 vs. uniprot
Match: A0A7S3KXK5_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3KXK5_9STRA) HSP 1 Score: 281 bits (720), Expect = 2.100e-85 Identity = 165/359 (45.96%), Postives = 211/359 (58.77%), Query Frame = 1 Query: 40 TRSLQSLVADANRGRRRQLHVGTAIMPHLLDDL-----KYEAVANEHFDHVVCEHHHKWEPLLAKR---------ADGTEVYDFTQSDRIVDWARRGGNKVKGHTLVWHVTSPKWIEEAPQA-RLREAVFEHIKTTMNHCLGKVYAWDVVNEPLHPDATGRLADTPFLRKLGPAYIDDCFRVAHHTDPNAVLILNENKGEGAGLPRGRSAKADALFALSRDLLARGVPLHEVGLQAHFDAAGTGQRRVPTPHSVARNIARFGDLGLGVNISEMDVRAAGLEQVGLGLAQRDAAAAAVFHDTLAAALAQPAFTGVTFWGFCDAHSWCHDFYKCVD--RPLLWDAAWRPKPALAAVRRALR 1065 T +L+++ A A + + +GTA+MP L D +Y A F+ +V EHH KW PL +D YDF ++DRIVDWA + G +VKGH LVWHVTSP + + +A LR + HI TTM H G++ WDVVNE L PD G LA+ F LGP+YI D FR AH DP A L N+NK E G SAK+DA + L DL +G+P+H VGLQAHF AAGTG+ VPTP +V + I R G LGL V++SEMDVR LE + R A ++HD LAAAL++PA + WGF D H+W DFY + PLLWD +R KPA AVR+AL+ Sbjct: 42 TLTLRAVAAAACK----HVTIGTAVMPGPLFDTATAEPEYAATIRSEFNAIVVEHHLKWSPLCVAEPGPLPDETPSDRLGRYDFYETDRIVDWALQNGLQVKGHVLVWHVTSPTALLQPLEAPALRAVLKRHIFTTMAHFRGRIRDWDVVNESLAPD--GSLAENIFYEVLGPSYIADAFRWAHQADPTARLFYNDNKVEAIG-----SAKSDAFYNLVADLKGKGIPIHGVGLQAHFKAAGTGRSAVPTPRAVKQQIKRLGALGLAVHLSEMDVRVGTLEPPSI----RPLAQTQIYHDILAAALSEPATEAIYLWGFTDKHTWIDDFYAEAEDEAPLLWDNHYRRKPAYYAVRQALQ 385
BLAST of jgi.p|Trimin1|168388 vs. uniprot
Match: A0A1E7EV99_9STRA (Glycoside hydrolase n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EV99_9STRA) HSP 1 Score: 279 bits (713), Expect = 2.390e-85 Identity = 150/320 (46.88%), Postives = 191/320 (59.69%), Query Frame = 1 Query: 139 KYEAVANEHFDHVVCEHHHKWEPLLAKR------ADGTEV------YDFTQSDRIVDWARRGGNKVKGHTLVWHVTSPKWIEEAPQARLREAVFEHIKTTMNHCLGKVYAWDVVNEPLHPDATGRLADTPFLRKLGPAYIDDCFRVAHHTDPNAVLILNENKGEGAGLPRGRSAKADALFALSRDLLARGVPLHEVGLQAHFDAAGTGQRRVPTPHSVARNIARFGDLGLGVNISEMDVRAAGLEQVGLGLAQRDAAAAAVFHDTLAAALAQPAFTGVTFWGFCDAHSWCHDFYKCVDRPLLWDAAWRPKPALAAVRRAL 1062 +Y F+ VV EHH KW P+ + ADG YDF +D IVDWA + KVKGH LVWHVTSP+++EE +RE + HI TTM H G++ WDVVNE L PD T LA+ F RK+GP YI+DCFR AH DP+A+L+ N+NK EG P KAD + L L+ +GVP+H G+QAHF+AAGTG +RVPTP V I R G+LGL VNISEMDVR + L +AQ+ ++HD + AAL +PAF G+ WGF D H+W FY D PL++D + K A +R AL Sbjct: 119 RYARTLRNEFNAVVIEHHLKWAPMCVELCANEMDADGLPSRPRLGRYDFHHADAIVDWAIKHNMKVKGHVLVWHVTSPQFLEEMSPEEVREQLRRHIFTTMGHFRGRINVWDVVNEALAPDGT--LAENVFFRKIGPGYIEDCFRWAHQADPDAILLYNDNKVEGMNGPN--KEKADGFYHLLASLIKKGVPIHGCGIQAHFNAAGTGNKRVPTPRMVKNQIHRLGNLGLTVNISEMDVRVSQLAPNLRQIAQKQ-----IYHDIIVAALTEPAFDGIWLWGFTDRHTWVTHFYH-DDEPLIFDELYERKDAYYGLRDAL 428
BLAST of jgi.p|Trimin1|168388 vs. uniprot
Match: A0A7S2UN11_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UN11_9STRA) HSP 1 Score: 275 bits (703), Expect = 3.270e-84 Identity = 170/394 (43.15%), Postives = 220/394 (55.84%), Query Frame = 1 Query: 139 KYEAVANEHFDHVVCEHHHKWEPL-------LAKRADGTEV--YDFTQSDRIVDWARRGGNKVKGHTLVWHVTSPKWIEEAPQA-RLREAVFEHIKTTMNHCLGKVYAWDVVNEPLHPDATGRLADTPFLRKLGPAYIDDCFRVAHHTDPNAVLILNENKGEGAGLPRGRSAKADALFALSRDLLARGVPLHEVGLQAHFDAAGTGQRRVPTPHSVARNIARFGDLGLGVNISEMDVRAAGLEQVGLGLAQRDAAAAAVFHDTLAAALAQPAFTGVTFWGFCDAHSWCHDFYKCVDRPLLWDAAWRPKPALAAVRRALRGAACSENGLRNAEAAAAAAEGAAEQDPDAFSTAAFGSEELWGSDWMLPEPVEGGAG-GTGAGPVAG-VSVDEPDW 1284 KY V F+ +V EHH KW PL ++ T + YDF D++VDWA G KVKGH L+WHVT+P +I E A ++RE + HI TT+ H G+++ WDVVNE L PD T LA FL+KLGP+YI+D FR AH DP A LI N+NK EG G P + K++ ++L + L +GVP+H G+QAHF+A G G++R PTP V + I R GDLGL VNISEMDVR + L + +AQ ++ D LAAAL++PAF G+ WGF D H+W FY D+PL++D + KP S +GLR+A A A P A G+ WG WM PEP GT A P A V PDW Sbjct: 81 KYAKVLQGEFNAIVIEHHLKWAPLCETLPGPISPSTPSTRIGRYDFEHVDQMVDWALSKGIKVKGHVLIWHVTTPGFINEQMSASQMREHMRRHIFTTVGHFRGRIHMWDVVNEALAPDGT--LAQNIFLKKLGPSYIEDAFRWAHEADPTAFLIYNDNKVEGMGGPN--ADKSNGFYSLLKGLKEKGVPVHGAGMQAHFNAGGVGRQRCPTPRMVKQQICRLGDLGLKVNISEMDVRVSKLPKNLQEVAQTQ-----IYRDILAAALSEPAFDGIWLWGFSDRHTWVKQFYY-DDQPLVFDEVYSRKP--------------SYHGLRDAIATLAPGGSVGGGVPLTSDHDAEGN--AWGHLWMQPEPKSSDPVLGTAATPTADDVGDSRPDW 448
BLAST of jgi.p|Trimin1|168388 vs. uniprot
Match: A0A7S1C1R6_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1C1R6_9STRA) HSP 1 Score: 273 bits (699), Expect = 6.680e-84 Identity = 172/434 (39.63%), Postives = 219/434 (50.46%), Query Frame = 1 Query: 1 MCDDASDVSSEDGTRSLQSLVADANRGRRRQLHVGTAIMPHLL------------DDLK--YEAVANEHFDHVVCEHHHKWEPL-------LAKRADGTEV-YDFTQSDRIVDWARRGGNKVKGHTLVWHVTSPKWIEEAPQARLREAVFEHIKTTMNHCLGKVYAWDVVNEPLHPDATGRLADTPFLRKLGPAYIDDCFRVAHHTDPNAVLILNENKGEGAGLPRGRSAKADALFALSRDLLARGVPLHEVGLQAHFDAAGTGQRRVPTPHSVARNIARFGDLGLGVNISEMDVRAAGLEQVGLGLAQRDAAAAAVFHDTLAAALAQPAFTGVTFWGFCDAHSWCHDFYKC----VDRPLLWDAAWRPKPALAAVRRALRGAACSENGLRNAEAAAAAAEGAAEQDPDAFSTAAFGSEELWGSDWMLPEPVEG 1224 M D + +DG + A A R +VG A++P L D Y F+ VV EHH KW PL L R E YDF +D +VDWA G VKGH LVWHVTSP ++E+ P AR E+V HI TTM H G++ WDVVNE + PD T LAD FLRK+GP Y+ CFR A DP+A+L N+NK EG+ LP GRS K DA + L R ++ GVP+H GLQ HFDAAGTG RRVP P +V + R G LGL V++SE+DVR L +R+ A V+ D + + F GV WGF D H+W DFY +D PL++D ++ K A A+ EG E D + E+WG DWM+ EP +G Sbjct: 1 MTDTQCPIVGDDGVKITLRESASALSTPSRPFYVGAAVLPKPLFGNDGEPDSDPAPDFSPAYGRTLRSEFNAVVVEHHLKWTPLCHSLPGPLPGRPSLREGRYDFHHADHLVDWALARGLAVKGHVLVWHVTSPPFLEDLPPARFAESVRRHIFTTMGHFRGRIRLWDVVNESIAPDGT--LADNVFLRKMGPGYVARCFRWAAEADPDALLYYNDNKVEGSSLPDGRSVKGDAFYELLRGMVEDGVPVHGAGLQCHFDAAGTGLRRVPHPGAVREQVRRLGGLGLRVHLSELDVRVGRLPD---DEGRREKAQCEVYRDIVKECRKEANFEGVWLWGFTDKHTWVKDFYYGGKVGMDAPLIFDTDYKKKGAYYALL-----------------------EGMTEHFGDKDKEIDW---EIWGRDWMVSEPEQG 403
BLAST of jgi.p|Trimin1|168388 vs. uniprot
Match: A0A7S3PXC8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PXC8_9STRA) HSP 1 Score: 272 bits (695), Expect = 1.860e-83 Identity = 161/379 (42.48%), Postives = 208/379 (54.88%), Query Frame = 1 Query: 127 LDDLKYEAVANEHFDHVVCEHHHKWEPL-------LAKRADGTEV--YDFTQSDRIVDWARRGGNKVKGHTLVWHVTSPKWIEEAPQARLREAVFEHIKTTMNHCLGKVYAWDVVNEPLHPDATGRLADTPFLRKLGPAYIDDCFRVAHHTDPNAVLILNENKGEGAGLPRGRSAKADALFALSRDLLARGVPLHEVGLQAHFDAAGTGQR-RVPTPHSVARNIARFGDLGLGVNISEMDVRAAGLEQVGLGLAQRDAAAAAVFHDTLAAALAQPAFTGVTFWGFCDAHSWCHDFYKCVDRPLLWDAAWRPKPALAAVRRALR----GAACSENGLRNAEAAAAAAEGAAEQDPDAFSTAAFGSEELWGSDWMLPEPVE 1221 + D Y + + F+ +V EHH KW PL + ++ + YDF+ DRIVDWA KVKGH LVWHVT+P W+E +R+A+ HI TTM H G++ WDVVNE L PD G LA+ FL+KLGP+YI+ CFR AH DP A LI N+NK E P KAD + L + L++ VP+H G+QAHF+A G G+R RVPTP V I R G+LGL VNISEMDVR + LE + A ++HD +AAAL + AF GV WGF D H+W +FY D PL++D + KPA A+R A+ G L + + D D S WGSDWM +P E Sbjct: 59 MGDTTYAKIVSSEFNSIVVEHHLKWAPLCETLPGPIDEKTPSNRLGRYDFSHVDRIVDWAIDRNMKVKGHVLVWHVTTPSWVESMSSEEIRQAIKRHIFTTMGHFQGRIKYWDVVNESLAPD--GSLAENIFLKKLGPSYIEQCFRWAHKADPTAFLIYNDNKVEAMNGPN--KNKADGFYKLLKRLVSNEVPIHGAGMQAHFNAGGVGERQRVPTPLQVKDQIRRIGELGLKVNISEMDVRVSKLEG---STELKTMAQKQIYHDIIAAALTEAAFEGVWLWGFSDRHTWVKNFYY-DDAPLIFDEKYDRKPAYFALRSAIGTLAIGGTVGGGVLLD------------KVDKDGKS---------WGSDWMPAQPKE 408
BLAST of jgi.p|Trimin1|168388 vs. uniprot
Match: B7FTY0_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FTY0_PHATC) HSP 1 Score: 274 bits (700), Expect = 2.360e-83 Identity = 155/334 (46.41%), Postives = 194/334 (58.08%), Query Frame = 1 Query: 91 QLHVGTAIMPHLLDDLKYEAVANEHFDHVVCEHHHKWEPLLA---------KRADGTEVYDFTQSDRIVDWARRGGNKVKGHTLVWHVTSPKWIEEAPQARLREAVFEHIKTTMNHCLGKVYAWDVVNEPLHPDATGRLADTPFLRKLGPAYIDDCFRVAHHTDPNAVLILNENKGEGAGLPRGRSAKADALFALSRDLLARGVPLHEVGLQAHFDAAGTGQRRVPTPHSVARNIARFGDLGLGVNISEMDVRAAGLEQVGLGLAQRDAAAAAVFHDTLAAALAQPAFTGVTFWGFCDAHSWCHDFYKCVDRPLLWDAAWRPKPALAAVRRALR 1065 +LH A +P Y V F+ +V EHH KW PL K +D YDF +D +VDWA + KVKGH LVWHVTSPK +E+ +R+ + HI T M H G++ WDVVNE L PD T LAD FLRKLGP+YI+D FR AH D +AVL+ N+NK EG S K+DA + L DL A+ VP+H G+QAH++AAG G R PTP SV + R G LGL VN SEMDVR + L +AQR +FHD LAAAL++PAF GV WGF D H+W FY D PL++D A+ K + R AL+ Sbjct: 94 ELHDAAASIP-----TPYARVLGNEFNAIVVEHHLKWNPLCVSEPGPLPSEKPSDRIGRYDFHHADSVVDWALKRSMKVKGHVLVWHVTSPKILEDMEPEEVRKELRRHIFTVMGHFRGRIQVWDVVNEALAPDGT--LADNVFLRKLGPSYIEDSFRWAHEADASAVLLYNDNKVEGID-----SRKSDAFYELLADLKAKNVPVHGCGVQAHWNAAGVGWNRPPTPRSVKAQVRRLGQLGLTVNFSEMDVRVSQLPANLRQIAQRQ-----IFHDLLAAALSEPAFDGVWLWGFTDRHTWVTHFYH-DDEPLIFDEAYARKESYYGFRDALK 409
BLAST of jgi.p|Trimin1|168388 vs. uniprot
Match: A0A6V2D7R8_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2D7R8_9STRA) HSP 1 Score: 268 bits (686), Expect = 1.140e-82 Identity = 161/372 (43.28%), Postives = 209/372 (56.18%), Query Frame = 1 Query: 139 KYEAVANEHFDHVVCEHHHKWEPL-------LAKRADGTE---VYDFTQSDRIVDWARRGGNKVKGHTLVWHVTSPKWIEEAPQARLREAVFEHIKTTMNHCLGKVYAWDVVNEPLHPDATGRLADTPFLRKLGPAYIDDCFRVAHHTDPNAVLILNENKGEGAGLPRGRSAKADALFALSRDLLARGVPLHEVGLQAHFDAAGTGQRRVPTPHSVARNIARFGDLGLGVNISEMDVRAAGLEQVGLGLAQRDAAAAAVFHDTLAAALAQPAFTGVTFWGFCDAHSWCHDFYKCVDRPLLWDAAWRPKPALAAVRRALRGAACSENGLRNAEAAAAAAEGAAEQDPDAFSTAAFGSEELWGSDWMLPEPVEG 1224 +Y V + F+ +V EHH KW PL ++ A T YDF D +VDWA KVKGH LVWHVT+P ++E+ A+LR + HI TTM H G++ WDVVNE L PD G LA+ FLRKLGP+YI+D FR AH DP A L+ N+NK EG P ++K+D + L ++L+ R VP+H G+QAHF+AAG G++R PTP V I R GDLGL VNISEMDVR + L +AQR ++ D L AAL++P+F G+ WGF D H+W FY D PL++D + K + +R AL A G+ G + D D S WG WM PEP EG Sbjct: 26 RYANVLQKEFNSIVIEHHLKWTPLCHTQPGPISPDAPPTHRLGKYDFHYCDLLVDWALAHNMKVKGHVLVWHVTTPPFVEDLSPAQLRNELKRHIFTTMGHFRGRIKVWDVVNEALAPD--GSLANNVFLRKLGPSYIEDSFRWAHEADPTAFLVYNDNKVEGMDGPN--ASKSDGYYRLLQNLVERDVPIHGAGMQAHFNAAGVGRQRPPTPRMVKNQIRRIGDLGLKVNISEMDVRVSKLPPNLRQIAQRQ-----IYRDILMAALSEPSFDGIWLWGFTDRHTWVTHFYH-DDEPLVFDEDYGRKESYYGMREALESIA--PGGVVGGGNVPL---GLDDLDGDGNS---------WGHMWMQPEPEEG 373 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|168388 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_8640 ID=mRNA_8640|Name=jgi.p|Trimin1|168388|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1377bp|location=Sequence derived from alignment at Contig_57:698155..701373- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGTGCGACGATGCCTCTGATGTCAGCAGTGAAGATGGCACCCGGAGCCTback to top protein sequence of jgi.p|Trimin1|168388 >Trimin1|168388|e_gw1.57.113.1 ID=Trimin1|168388|e_gw1.57.113.1|Name=jgi.p|Trimin1|168388|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=459bp MCDDASDVSSEDGTRSLQSLVADANRGRRRQLHVGTAIMPHLLDDLKYEAback to top mRNA from alignment at Contig_57:698155..701373- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_8640 ID=mRNA_8640|Name=jgi.p|Trimin1|168388|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=3219bp|location=Sequence derived from alignment at Contig_57:698155..701373- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_57:698155..701373- >mRNA_8640 ID=mRNA_8640|Name=jgi.p|Trimin1|168388|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1377bp|location=Sequence derived from alignment at Contig_57:698155..701373- (Tribonema minus UTEX_B_3156 )back to top |