mRNA_8586 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|350138
Unique Name	mRNA_8586
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|350138 vs. uniprot
Match: A0A836CC96_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CC96_9STRA)

HSP 1 Score: 1483 bits (3839), Expect = 0.000e+0
Identity = 1057/1057 (100.00%), Postives = 1057/1057 (100.00%), Query Frame = 2

Query:  113 MRTGRRKRPAESADGELYLDDLGEVDGEAIRLVYEPLEDDDGYSFALLHKDARVPLPLAERVGEGFASALEQALNGKLEALLKHVRLRKRQLTTAQPALSSDTEPEPQKTAAXXXXXXXXXXXXXXXXXGARAEQRRGSTGSSKSGXXXXXXXAAPLLAAEGARPKAHLKALALLQSRAPAAAGVRRSVARPLPAEWQTFEEETAAVHAKNLKRKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAEQHYLSVFVHEFLQLVPIMDEAPLRAALVRTSSPKSPTSFDHGAAAAXXXXFDDAAAWCAVAVGAALQGADDAHVRAYARRSXXXXXXXXXXXXXAQDTDAALLGRVRLQLLRSCVADCLGDAAGFAAETAAAGALWDRLAARARMGSQTVSAGDTAAAVRYLLRASQLRADSPSAWAAAVADAAGAAAAHVPPEEWDDARVDALLPPLPAALRALPAALLQPLQRRDARAFVVALQEALAASACSQLRGAAAPPGGDVLVHCVEAVQLALSLLTAAPQAAQCGVLLRTALSGWLGFFKLLVGDEDGALSALRAAVVDFEGLPGAARWPPAAHQLEVTALLLLRRGRAQEYRRLRAVHAAFARGRAPLPPAERCEPRRDACAHPLCRHVLLRAGALPAAAAGFGDHAEPRQLPSPPPQLQQPFLQQLLQMPFPMQSSADAQDGAGYDMDAAAVPWPQHQFHFGGDCSSGGGSSDALQQLLAPGALPPPPHAPLQRDAAAEYAYGARRCSLPAVPFGHAASSCGGIDADGCLSGEWRHSSSHYPGEQLGGTVRRASFEPIGSMDLCGSIEXXXXXXXXXXXXXXXXXXXXXXIGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEHFASSARRTSATSXXXDMPQAXXXXXXXXAGSGADDDFAFLAATADIFMGGEGPLDALDVTDAAFEPPSGDAMPLALDPQLFPYLDWG 3283
            MRTGRRKRPAESADGELYLDDLGEVDGEAIRLVYEPLEDDDGYSFALLHKDARVPLPLAERVGEGFASALEQALNGKLEALLKHVRLRKRQLTTAQPALSSDTEPEPQKTAAXXXXXXXXXXXXXXXXXGARAEQRRGSTGSSKSGXXXXXXXAAPLLAAEGARPKAHLKALALLQSRAPAAAGVRRSVARPLPAEWQTFEEETAAVHAKNLKRKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAEQHYLSVFVHEFLQLVPIMDEAPLRAALVRTSSPKSPTSFDHGAAAAXXXXFDDAAAWCAVAVGAALQGADDAHVRAYARRSXXXXXXXXXXXXXAQDTDAALLGRVRLQLLRSCVADCLGDAAGFAAETAAAGALWDRLAARARMGSQTVSAGDTAAAVRYLLRASQLRADSPSAWAAAVADAAGAAAAHVPPEEWDDARVDALLPPLPAALRALPAALLQPLQRRDARAFVVALQEALAASACSQLRGAAAPPGGDVLVHCVEAVQLALSLLTAAPQAAQCGVLLRTALSGWLGFFKLLVGDEDGALSALRAAVVDFEGLPGAARWPPAAHQLEVTALLLLRRGRAQEYRRLRAVHAAFARGRAPLPPAERCEPRRDACAHPLCRHVLLRAGALPAAAAGFGDHAEPRQLPSPPPQLQQPFLQQLLQMPFPMQSSADAQDGAGYDMDAAAVPWPQHQFHFGGDCSSGGGSSDALQQLLAPGALPPPPHAPLQRDAAAEYAYGARRCSLPAVPFGHAASSCGGIDADGCLSGEWRHSSSHYPGEQLGGTVRRASFEPIGSMDLCGSIEXXXXXXXXXXXXXXXXXXXXXXIGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEHFASSARRTSATSXXXDMPQAXXXXXXXXAGSGADDDFAFLAATADIFMGGEGPLDALDVTDAAFEPPSGDAMPLALDPQLFPYLDWG
Sbjct:    1 MRTGRRKRPAESADGELYLDDLGEVDGEAIRLVYEPLEDDDGYSFALLHKDARVPLPLAERVGEGFASALEQALNGKLEALLKHVRLRKRQLTTAQPALSSDTEPEPQKTAAXXXXXXXXXXXXXXXXXGARAEQRRGSTGSSKSGXXXXXXXAAPLLAAEGARPKAHLKALALLQSRAPAAAGVRRSVARPLPAEWQTFEEETAAVHAKNLKRKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAEQHYLSVFVHEFLQLVPIMDEAPLRAALVRTSSPKSPTSFDHGAAAAXXXXFDDAAAWCAVAVGAALQGADDAHVRAYARRSXXXXXXXXXXXXXAQDTDAALLGRVRLQLLRSCVADCLGDAAGFAAETAAAGALWDRLAARARMGSQTVSAGDTAAAVRYLLRASQLRADSPSAWAAAVADAAGAAAAHVPPEEWDDARVDALLPPLPAALRALPAALLQPLQRRDARAFVVALQEALAASACSQLRGAAAPPGGDVLVHCVEAVQLALSLLTAAPQAAQCGVLLRTALSGWLGFFKLLVGDEDGALSALRAAVVDFEGLPGAARWPPAAHQLEVTALLLLRRGRAQEYRRLRAVHAAFARGRAPLPPAERCEPRRDACAHPLCRHVLLRAGALPAAAAGFGDHAEPRQLPSPPPQLQQPFLQQLLQMPFPMQSSADAQDGAGYDMDAAAVPWPQHQFHFGGDCSSGGGSSDALQQLLAPGALPPPPHAPLQRDAAAEYAYGARRCSLPAVPFGHAASSCGGIDADGCLSGEWRHSSSHYPGEQLGGTVRRASFEPIGSMDLCGSIEXXXXXXXXXXXXXXXXXXXXXXIGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEHFASSARRTSATSXXXDMPQAXXXXXXXXAGSGADDDFAFLAATADIFMGGEGPLDALDVTDAAFEPPSGDAMPLALDPQLFPYLDWG 1057

[Close]

BLAST of jgi.p|Trimin1|350138 vs. uniprot
Match: A0A835ZE19_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZE19_9STRA)

HSP 1 Score: 156 bits (395), Expect = 7.710e-35
Identity = 147/365 (40.27%), Postives = 191/365 (52.33%), Query Frame = 2

Query: 1304 WCAVAVGAALQGADDAHVRAYARRSXXXXXXXXXXXXX------------AQDTDAALLGRVRLQLLRSCVADCLGDAAGFAAETAAAGALWDRLAARARMGSQTVSA--------GDTAAAVRYLLRASQL----RADSPSAWAAAVADAAGAAAAHVPPEEWDDARVDALLPPLPAALRALPAALLQPLQRRDARAFVVALQEALAASACSQLRGAAAPPGGDVLVHCVEAVQLALSLLTAAPQAAQCGVLLRTALSGWLGFFKLLVGDEDGALSALRAAVVDFEGLPGAARWPPAAHQLEVTALLLLRRGRAQEYRRLRAVHAAFAR--GRAPLPPAERCEPRRDACAHPLCRHVLLRAGAL 2320
            W  +A+GA LQGAD+      A  S  XXXXXXXXXXX             + T +++L  V+  +LR+ V+DCLGD  GF A  A A  LW  L A  R  +   +A        G T  ++ +++R  +L    R  SP+ W        GAAA           R   L     A    LP ALL+PL RRDAR F++AL+E  AA+   +L   AA    +VL H    +  AL+ L A+  A++ G LL + L  WLGF KLL+GD  G L   R  +  +E +PGA RW  AAH+ E  A+ LL RG A EY R+R VHA FA   GR  + PAERC   + +CAH LC+  L RAGAL
Sbjct:  289 WACMALGAMLQGADEQQSCRCADLSAAXXXXXXXXXXXXXXXXXXXXXXXGERTLSSVLQLVQNLVLRAVVSDCLGDMEGFRASGADAVQLWSDLGALIRAPATLATAAEAACDHLGTTLGSLAHVMRRLKLVVSCRPASPADWD-------GAAAVE---------RCHRLAAAGGAQRGGLPQALLEPLLRRDARQFLLALEEGFAATEYQRLTSPAAAAADNVLAHAAAPLLAALTDLRASA-ASRSGALLLSTLLAWLGFIKLLLGDVAGWLIVHRELIALYEAVPGALRWSGAAHRAETVAMALLSRGYAAEYERVRRVHARFAEPCGRPAMAPAERCSIAQHSCAHFLCQAALRRAGAL 636

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|350138 vs. uniprot

BLAST of jgi.p|Trimin1|350138 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A836CC96_9STRA	0.000e+0	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835ZE19_9STRA	7.710e-35	40.27	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_57	contig	Contig_57:231213..235733 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|350138\|estExt_Genemark1.C_Ctg_570037
Hectar predicted targeting category	other localisation
TranscriptId	350460
Track	FilteredModels1
ProteinId	350138

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|350138	gene_8586	Tribonema minus UTEX_B_3156	gene	Contig_57 231213..235733 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_8586_1	exon_8586_1	Tribonema minus UTEX_B_3156	exon	Contig_57 231213..231587 +
exon_8586_2	exon_8586_2	Tribonema minus UTEX_B_3156	exon	Contig_57 232197..233850 +
exon_8586_3	exon_8586_3	Tribonema minus UTEX_B_3156	exon	Contig_57 234477..235733 +

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR5_8586	UTR5_8586	Tribonema minus UTEX_B_3156	five_prime_UTR	Contig_57 231213..231324 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_8586	CDS_8586	Tribonema minus UTEX_B_3156	CDS	Contig_57 231325..231587 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|350138	Trimin1\|350138\|estExt_Genemark1.C_Ctg_570037	Tribonema minus UTEX_B_3156	polypeptide	Contig_57 231325..235733 +

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_57:231213..235733+
coding sequence from alignment at Contig_57:231213..235733+

spliced messenger RNA

>mRNA_8586 ID=mRNA_8586|Name=jgi.p|Trimin1|350138|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=3286bp|location=Sequence derived from alignment at Contig_57:231213..235733+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
CACACTGGGACTAGACACACAGCCACCCACACCAGGTGCTGCTGCGAAGA
ACATAGCGACAGGTACCGGTATGTGGAGTTGAACTTCAGGGTCACACGTC
GACGTCGACGCCATGAGGACAGGCAGACGCAAAAGGCCAGCTGAATCAGC
TGATGGGGAGCTCTATTTGGACGATCTTGGCGAGGTGGACGGGGAGGCCA
TAAGGCTGGTGTACGAGCCTCTGGAAGACGATGACGGCTACAGCTTTGCT
CTCCTCCACAAGGACGCACGGGTCCCTCTGCCTCTTGCAGAGAGAGTCGG
CGAGGGCTTCGCCTCCGCCCTGGAGCAGGCTTTGAACGGCAAGCTGGAGG
CGCTGCTGAAGCATGTGCGGCTGAGGAAGCGGCAGCTCACCACCGCGCAG
CCGGCCCTCAGCAGCGACACTGAGCCGGAGCCTCAGAAAACGGCGGCGGC
AAAGGCGGCGGCAGCGGCAGCGGCGGCGCTGGAGGCTGCAGCGCCAGCTG
GCGCGCGCGCGGAACAGAGGCGCGGCAGCACCGGCAGCAGTAAGTCCGGC
GCTGCTGCCCGTGCGCCCGCGGCAGCACCGCTGCTGGCGGCGGAGGGCGC
GCGGCCCAAGGCGCACCTCAAGGCGCTGGCGCTGCTGCAGAGCCGCGCGC
CCGCCGCGGCCGGCGTCAGGCGCTCGGTCGCGCGCCCGTTGCCAGCCGAA
TGGCAGACGTTCGAGGAGGAGACCGCGGCTGTGCACGCCAAAAACCTGAA
GCGGAAGGAGCCGCCGCCACCGCCGCCGCAGCGCGCCGCCTCCGCCGCCG
CGGACGCGACGTCGCCTCTGCGCAGCCCTTCTGCGCGGCGCCGGCGCAGC
TGCGGGCCTGCGCAAGTGGCGGGCGCGGAAGCGGCGGCGGCGGCGGTGGC
GAAGGAGGAGGAGGAGGAGGCGACGACACTGCGTGCGGTGCCGCCGTCGC
CACCTCTGGCGGTGCTGGTGGAGGAGAAGCGGTTGGGCGGTAAGAAGCTC
AGGGCTGTGCAGCGGCACTACCACCAGCACCACCAGCAGCAGCAGCAGCA
GGATGAACTGGTGGTGCGACAGGCGGTGGCGGCAGTTGAAGAAACCGCCG
CGGCAGCGGCACAGATGGCGGCAGGCGCGGCGGAGCAGCACTACCTGTCT
GTTTTTGTGCACGAGTTTCTGCAGCTGGTCCCGATCATGGACGAGGCGCC
GCTGCGCGCAGCACTGGTGCGGACTTCAAGTCCCAAATCACCAACTTCAT
TCGATCACGGCGCAGCAGCAGCCGCCGCGGCGTCATTTGACGACGCCGCC
GCGTGGTGCGCGGTCGCGGTCGGCGCGGCGCTGCAGGGCGCGGACGACGC
GCACGTTCGCGCGTACGCGCGGCGCTCCGCAGCCGCCGCCGCTGCTGCCG
CACACGGCGGCGGCGGCGCGCAGGACACGGACGCGGCGCTGCTGGGGCGC
GTCCGCCTCCAGCTGCTGCGCTCATGCGTTGCCGACTGCCTCGGCGACGC
CGCCGGCTTTGCCGCGGAGACGGCGGCGGCGGGCGCGCTGTGGGACCGGC
TCGCGGCGCGCGCGCGCATGGGGTCTCAGACCGTCAGCGCCGGTGACACG
GCCGCCGCCGTCCGCTACCTGCTGCGCGCATCGCAGCTGCGCGCGGATTC
GCCGTCGGCTTGGGCGGCGGCGGTCGCGGACGCTGCCGGCGCGGCAGCAG
CGCATGTGCCGCCGGAGGAATGGGACGACGCGCGCGTTGACGCGCTGCTG
CCGCCGCTGCCGGCGGCGCTGCGCGCGCTCCCCGCGGCGCTGCTGCAGCC
GCTGCAGCGGCGCGACGCGCGCGCCTTTGTCGTCGCGCTGCAGGAGGCGC
TGGCGGCGTCCGCGTGCAGTCAGCTGAGGGGCGCGGCGGCGCCGCCGGGC
GGCGACGTTCTAGTGCATTGCGTGGAGGCGGTGCAGCTGGCGTTGAGCCT
GCTGACGGCGGCGCCGCAGGCGGCGCAATGCGGGGTGCTGCTGAGGACGG
CGCTGTCTGGCTGGCTTGGCTTCTTCAAGCTGCTCGTCGGCGACGAAGAT
GGCGCGCTGAGCGCGCTGCGCGCCGCCGTCGTGGACTTCGAAGGCCTGCC
CGGCGCCGCGCGCTGGCCGCCCGCGGCGCACCAGCTCGAGGTTACAGCGC
TGCTGCTGCTGCGCCGCGGCCGCGCGCAGGAGTACAGGCGCCTGCGCGCC
GTGCACGCCGCCTTTGCGCGCGGCCGCGCGCCGCTGCCGCCCGCGGAGCG
CTGCGAGCCGCGCCGCGACGCGTGCGCGCACCCGCTGTGCCGCCACGTGC
TGCTGCGCGCGGGCGCGTTGCCGGCTGCAGCCGCGGGCTTCGGCGATCAC
GCGGAGCCGCGGCAGCTGCCGTCGCCGCCACCGCAACTGCAGCAGCCGTT
CTTGCAGCAGCTGCTGCAGATGCCGTTCCCCATGCAGTCGTCGGCGGACG
CGCAAGACGGCGCAGGCTACGACATGGATGCTGCTGCGGTTCCGTGGCCA
CAGCACCAGTTCCACTTTGGCGGCGACTGCAGCAGCGGCGGCGGCAGCAG
CGACGCCTTGCAGCAGCTGCTGGCGCCTGGCGCGCTGCCGCCGCCGCCGC
ACGCGCCGCTGCAGCGGGACGCAGCAGCGGAATACGCTTACGGCGCTCGC
CGCTGCAGCCTGCCGGCAGTGCCGTTTGGCCATGCAGCCTCCAGCTGCGG
CGGCATCGACGCGGATGGCTGCCTCAGTGGCGAATGGCGGCACAGCAGCA
GCCACTACCCCGGCGAGCAGCTCGGCGGCACGGTGCGGCGCGCCAGCTTT
GAGCCCATTGGCAGTATGGATCTCTGCGGCAGCATCGAGCATCTCGGTGC
CATGGAGCGGCGCAGCAGCTTTGAGCCCAGCAGCAACGTTGAGCGTTGTG
GCAGCATTGGGCGTTGCAACAGCATCGAGCACCTTGGCAACGCCGGGCAT
CGCGGCGGCTCTGAGCACCCCAGCAGCATTCAGCATCGCGGCAGCATCGA
GCGCCGCGGCAGTGCTGAGCACTTCGCCAGCAGCGCGCGCCGCACCAGCG
CCACCAGCAGCAGCAGCGACATGCCGCAGGCGCTGCTGCCGCCGCCGCCG
CCGCTCGCCGGCAGCGGCGCGGACGACGACTTTGCCTTCCTGGCGGCGAC
CGCGGACATCTTCATGGGCGGCGAGGGCCCGCTGGACGCGCTCGACGTGA
CGGACGCGGCGTTCGAGCCGCCGTCCGGCGATGCCATGCCGCTCGCGCTC
GACCCGCAGCTGTTCCCGTACCTCGACTGGGGGTGA

protein sequence of jgi.p|Trimin1|350138

>Trimin1|350138|estExt_Genemark1.C_Ctg_570037 ID=Trimin1|350138|estExt_Genemark1.C_Ctg_570037|Name=jgi.p|Trimin1|350138|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=1058bp
MRTGRRKRPAESADGELYLDDLGEVDGEAIRLVYEPLEDDDGYSFALLHK
DARVPLPLAERVGEGFASALEQALNGKLEALLKHVRLRKRQLTTAQPALS
SDTEPEPQKTAAAKAAAAAAAALEAAAPAGARAEQRRGSTGSSKSGAAAR
APAAAPLLAAEGARPKAHLKALALLQSRAPAAAGVRRSVARPLPAEWQTF
EEETAAVHAKNLKRKEPPPPPPQRAASAAADATSPLRSPSARRRRSCGPA
QVAGAEAAAAAVAKEEEEEATTLRAVPPSPPLAVLVEEKRLGGKKLRAVQ
RHYHQHHQQQQQQDELVVRQAVAAVEETAAAAAQMAAGAAEQHYLSVFVH
EFLQLVPIMDEAPLRAALVRTSSPKSPTSFDHGAAAAAAASFDDAAAWCA
VAVGAALQGADDAHVRAYARRSAAAAAAAAHGGGGAQDTDAALLGRVRLQ
LLRSCVADCLGDAAGFAAETAAAGALWDRLAARARMGSQTVSAGDTAAAV
RYLLRASQLRADSPSAWAAAVADAAGAAAAHVPPEEWDDARVDALLPPLP
AALRALPAALLQPLQRRDARAFVVALQEALAASACSQLRGAAAPPGGDVL
VHCVEAVQLALSLLTAAPQAAQCGVLLRTALSGWLGFFKLLVGDEDGALS
ALRAAVVDFEGLPGAARWPPAAHQLEVTALLLLRRGRAQEYRRLRAVHAA
FARGRAPLPPAERCEPRRDACAHPLCRHVLLRAGALPAAAAGFGDHAEPR
QLPSPPPQLQQPFLQQLLQMPFPMQSSADAQDGAGYDMDAAAVPWPQHQF
HFGGDCSSGGGSSDALQQLLAPGALPPPPHAPLQRDAAAEYAYGARRCSL
PAVPFGHAASSCGGIDADGCLSGEWRHSSSHYPGEQLGGTVRRASFEPIG
SMDLCGSIEHLGAMERRSSFEPSSNVERCGSIGRCNSIEHLGNAGHRGGS
EHPSSIQHRGSIERRGSAEHFASSARRTSATSSSSDMPQALLPPPPPLAG
SGADDDFAFLAATADIFMGGEGPLDALDVTDAAFEPPSGDAMPLALDPQL
FPYLDWG*

mRNA from alignment at Contig_57:231213..235733+

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_8586 ID=mRNA_8586|Name=jgi.p|Trimin1|350138|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=4521bp|location=Sequence derived from alignment at Contig_57:231213..235733+ (Tribonema minus UTEX_B_3156 )
CACACTGGGACTAGACACACAGCCACCCACACCAGGTGCTGCTGCGAAGA
ACATAGCGACAGGTACCGGTATGTGGAGTTGAACTTCAGGGTCACACGTC
GACGTCGACGCCATGAGGACAGGCAGACGCAAAAGGCCAGCTGAATCAGC
TGATGGGGAGCTCTATTTGGACGATCTTGGCGAGGTGGACGGGGAGGCCA
TAAGGCTGGTGTACGAGCCTCTGGAAGACGATGACGGCTACAGCTTTGCT
CTCCTCCACAAGGACGCACGGGTCCCTCTGCCTCTTGCAGAGAGAGTCGG
CGAGGGCTTCGCCTCCGCCCTGGAGCAGGCTTTGAACGGCAAGCTGGAGG
CGCTGCTGAAGCATGTGCGGCTGAGGTGAGCCGAGCGCTTCTTATGGAGC
TGATCGATGCTTACGATCTGCTCGTACCGCATGGCTGCTGCTGCTGCCTT
GTCGGCTGAAAAAGCAATGGGGATCTTTTGAGGGCTCTTCCAATTACTTC
ATTTTTTTCCTGGTTAGATGTTGTACATACAGCGCACCAGCTCAGAGCGT
CTCTGCTCGCTCCTCATATCCCAATAACATGATCTGATATCGTTCGCCGC
TGTGTCTGCATTCGTGCCCTGGCTTTGCTGCAGCTGCGACTTCTGCACGC
AAGCAAAAAGAAGGCAAGTGATCCAAAAAGCTATTTCTTTTGCTGCAATG
TCAACTTGAAATTGGTGGCTATATGGAGGTGTTTGGCATCCTTCGTGTCA
ACAGGCATGGAAGCACGCAGATGAGGGATAAGCCTCGCTCTCTTCTGGTT
TCAGCTCAAATCACACCTGTGCATGTTCTCATGCTGCTGCCATCAAGGCT
GCCAGGGACGATCTCTAACCGCACACCTCCGTGCACGCTGTGCTGCACTG
CAAGTGCAGATGTAACGGCAACGCCCTGCAGGTGTGCAGCCAGTGCGCGC
CGCGCAGCCGGCCGTGCATCTACTCTGGCCGCAGGAAGCGGCAGCTCACC
ACCGCGCAGCCGGCCCTCAGCAGCGACACTGAGCCGGAGCCTCAGAAAAC
GGCGGCGGCAAAGGCGGCGGCAGCGGCAGCGGCGGCGCTGGAGGCTGCAG
CGCCAGCTGGCGCGCGCGCGGAACAGAGGCGCGGCAGCACCGGCAGCAGT
AAGTCCGGCGCTGCTGCCCGTGCGCCCGCGGCAGCACCGCTGCTGGCGGC
GGAGGGCGCGCGGCCCAAGGCGCACCTCAAGGCGCTGGCGCTGCTGCAGA
GCCGCGCGCCCGCCGCGGCCGGCGTCAGGCGCTCGGTCGCGCGCCCGTTG
CCAGCCGAATGGCAGACGTTCGAGGAGGAGACCGCGGCTGTGCACGCCAA
AAACCTGAAGCGGAAGGAGCCGCCGCCACCGCCGCCGCAGCGCGCCGCCT
CCGCCGCCGCGGACGCGACGTCGCCTCTGCGCAGCCCTTCTGCGCGGCGC
CGGCGCAGCTGCGGGCCTGCGCAAGTGGCGGGCGCGGAAGCGGCGGCGGC
GGCGGTGGCGAAGGAGGAGGAGGAGGAGGCGACGACACTGCGTGCGGTGC
CGCCGTCGCCACCTCTGGCGGTGCTGGTGGAGGAGAAGCGGTTGGGCGGT
AAGAAGCTCAGGGCTGTGCAGCGGCACTACCACCAGCACCACCAGCAGCA
GCAGCAGCAGGATGAACTGGTGGTGCGACAGGCGGTGGCGGCAGTTGAAG
AAACCGCCGCGGCAGCGGCACAGATGGCGGCAGGCGCGGCGGAGCAGCAC
TACCTGTCTGTTTTTGTGCACGAGTTTCTGCAGCTGGTCCCGATCATGGA
CGAGGCGCCGCTGCGCGCAGCACTGGTGCGGACTTCAAGTCCCAAATCAC
CAACTTCATTCGATCACGGCGCAGCAGCAGCCGCCGCGGCGTCATTTGAC
GACGCCGCCGCGTGGTGCGCGGTCGCGGTCGGCGCGGCGCTGCAGGGCGC
GGACGACGCGCACGTTCGCGCGTACGCGCGGCGCTCCGCAGCCGCCGCCG
CTGCTGCCGCACACGGCGGCGGCGGCGCGCAGGACACGGACGCGGCGCTG
CTGGGGCGCGTCCGCCTCCAGCTGCTGCGCTCATGCGTTGCCGACTGCCT
CGGCGACGCCGCCGGCTTTGCCGCGGAGACGGCGGCGGCGGGCGCGCTGT
GGGACCGGCTCGCGGCGCGCGCGCGCATGGGGTCTCAGACCGTCAGCGCC
GGTGACACGGCCGCCGCCGTCCGCTACCTGCTGCGCGCATCGCAGCTGCG
CGCGGATTCGCCGTCGGCTTGGGCGGCGGCGGTCGCGGACGCTGCCGGCG
CGGCAGCAGCGCATGTGCCGCCGGAGGAATGGGACGACGCGCGCGTTGAC
GCGCTGCTGCCGCCGCTGCCGGCGGCGCTGCGCGCGCTCCCCGCGGCGCT
GCTGCAGCCGCTGCAGCGGCGCGACGCGCGCGCCTTTGTCGTCGCGCTGC
AGGAGGCGCTGGCGGCGTCCGCGTGCAGTCAGCTGAGGGGCGCGGCGGCG
CCGCCGGGCGGCGACGTTCTAGTGCATTGCGTGGAGGCGGTGCAGCTGGC
GTTGAGCCTGCTGACGGCGGCGCCGCAGGCGGCGCAATGCGGGGTGCTGC
TGAGGACGGCGCTGTCTGGCTGGCTTGGCTTCTTCAAGGTGCGTGTGTGT
GGCACGTATTTCATTGTGCGCTCCTAGCGCGTGTCACTCTGGAGGTGCGA
CCCTGTGCAGCATCACACCCTTGTCGTATCATCGCCTGTGGAACGCGTGT
TGTCCAGCGTGCAGTCGGGTCCGGTGGCGTGTCTTGATCCTGCACAGTGC
AGCCATACATGCTGATGATGATGTGCGCGTTGCGCATCCCCGCCCGCGTC
GGTGCGTGCTGCGCTCTATGTCTCCCTTGTGCCTCTTTTCAATGCCTGTC
CGTGTGGTCTGTGCCACCATCAGCTGCAATGACGCGGCGCTGACGATGCG
TGCTGTGTTGCACATATTGTGGCGCCGACGCCGCCTGTGCTGCAGGCAAG
CATCGCTCTTGAAATTTGCCTCACGTCGTCAAGCCTGGCCTGGCCCTGAG
TTGCTTGCCCCGCTCCCCACCCATTTGCCTACACACACCGTCTGCTTCCC
ATGCTGCCGCGCGCACTCCCTCACTGCCTTTAAAGCCCGCAATGCGCCTC
CGACCTTGACGCGCCGCCGCACGCGCCGCCATGCGCCGCTCTTCGTTTGT
GTGGCGCGTCATCACTCCCCCTACCCCCCCCCCTCCCCTTCCGGCGCCGC
GGTGCCGCGCGCAGCTGCTCGTCGGCGACGAAGATGGCGCGCTGAGCGCG
CTGCGCGCCGCCGTCGTGGACTTCGAAGGCCTGCCCGGCGCCGCGCGCTG
GCCGCCCGCGGCGCACCAGCTCGAGGTTACAGCGCTGCTGCTGCTGCGCC
GCGGCCGCGCGCAGGAGTACAGGCGCCTGCGCGCCGTGCACGCCGCCTTT
GCGCGCGGCCGCGCGCCGCTGCCGCCCGCGGAGCGCTGCGAGCCGCGCCG
CGACGCGTGCGCGCACCCGCTGTGCCGCCACGTGCTGCTGCGCGCGGGCG
CGTTGCCGGCTGCAGCCGCGGGCTTCGGCGATCACGCGGAGCCGCGGCAG
CTGCCGTCGCCGCCACCGCAACTGCAGCAGCCGTTCTTGCAGCAGCTGCT
GCAGATGCCGTTCCCCATGCAGTCGTCGGCGGACGCGCAAGACGGCGCAG
GCTACGACATGGATGCTGCTGCGGTTCCGTGGCCACAGCACCAGTTCCAC
TTTGGCGGCGACTGCAGCAGCGGCGGCGGCAGCAGCGACGCCTTGCAGCA
GCTGCTGGCGCCTGGCGCGCTGCCGCCGCCGCCGCACGCGCCGCTGCAGC
GGGACGCAGCAGCGGAATACGCTTACGGCGCTCGCCGCTGCAGCCTGCCG
GCAGTGCCGTTTGGCCATGCAGCCTCCAGCTGCGGCGGCATCGACGCGGA
TGGCTGCCTCAGTGGCGAATGGCGGCACAGCAGCAGCCACTACCCCGGCG
AGCAGCTCGGCGGCACGGTGCGGCGCGCCAGCTTTGAGCCCATTGGCAGT
ATGGATCTCTGCGGCAGCATCGAGCATCTCGGTGCCATGGAGCGGCGCAG
CAGCTTTGAGCCCAGCAGCAACGTTGAGCGTTGTGGCAGCATTGGGCGTT
GCAACAGCATCGAGCACCTTGGCAACGCCGGGCATCGCGGCGGCTCTGAG
CACCCCAGCAGCATTCAGCATCGCGGCAGCATCGAGCGCCGCGGCAGTGC
TGAGCACTTCGCCAGCAGCGCGCGCCGCACCAGCGCCACCAGCAGCAGCA
GCGACATGCCGCAGGCGCTGCTGCCGCCGCCGCCGCCGCTCGCCGGCAGC
GGCGCGGACGACGACTTTGCCTTCCTGGCGGCGACCGCGGACATCTTCAT
GGGCGGCGAGGGCCCGCTGGACGCGCTCGACGTGACGGACGCGGCGTTCG
AGCCGCCGTCCGGCGATGCCATGCCGCTCGCGCTCGACCCGCAGCTGTTC
CCGTACCTCGACTGGGGGTGA

Coding sequence (CDS) from alignment at Contig_57:231213..235733+

>mRNA_8586 ID=mRNA_8586|Name=jgi.p|Trimin1|350138|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=3174bp|location=Sequence derived from alignment at Contig_57:231213..235733+ (Tribonema minus UTEX_B_3156 )
ATGAGGACAGGCAGACGCAAAAGGCCAGCTGAATCAGCTGATGGGGAGCT
CTATTTGGACGATCTTGGCGAGGTGGACGGGGAGGCCATAAGGCTGGTGT
ACGAGCCTCTGGAAGACGATGACGGCTACAGCTTTGCTCTCCTCCACAAG
GACGCACGGGTCCCTCTGCCTCTTGCAGAGAGAGTCGGCGAGGGCTTCGC
CTCCGCCCTGGAGCAGGCTTTGAACGGCAAGCTGGAGGCGCTGCTGAAGC
ATGTGCGGCTGAGGAAGCGGCAGCTCACCACCGCGCAGCCGGCCCTCAGC
AGCGACACTGAGCCGGAGCCTCAGAAAACGGCGGCGGCAAAGGCGGCGGC
AGCGGCAGCGGCGGCGCTGGAGGCTGCAGCGCCAGCTGGCGCGCGCGCGG
AACAGAGGCGCGGCAGCACCGGCAGCAGTAAGTCCGGCGCTGCTGCCCGT
GCGCCCGCGGCAGCACCGCTGCTGGCGGCGGAGGGCGCGCGGCCCAAGGC
GCACCTCAAGGCGCTGGCGCTGCTGCAGAGCCGCGCGCCCGCCGCGGCCG
GCGTCAGGCGCTCGGTCGCGCGCCCGTTGCCAGCCGAATGGCAGACGTTC
GAGGAGGAGACCGCGGCTGTGCACGCCAAAAACCTGAAGCGGAAGGAGCC
GCCGCCACCGCCGCCGCAGCGCGCCGCCTCCGCCGCCGCGGACGCGACGT
CGCCTCTGCGCAGCCCTTCTGCGCGGCGCCGGCGCAGCTGCGGGCCTGCG
CAAGTGGCGGGCGCGGAAGCGGCGGCGGCGGCGGTGGCGAAGGAGGAGGA
GGAGGAGGCGACGACACTGCGTGCGGTGCCGCCGTCGCCACCTCTGGCGG
TGCTGGTGGAGGAGAAGCGGTTGGGCGGTAAGAAGCTCAGGGCTGTGCAG
CGGCACTACCACCAGCACCACCAGCAGCAGCAGCAGCAGGATGAACTGGT
GGTGCGACAGGCGGTGGCGGCAGTTGAAGAAACCGCCGCGGCAGCGGCAC
AGATGGCGGCAGGCGCGGCGGAGCAGCACTACCTGTCTGTTTTTGTGCAC
GAGTTTCTGCAGCTGGTCCCGATCATGGACGAGGCGCCGCTGCGCGCAGC
ACTGGTGCGGACTTCAAGTCCCAAATCACCAACTTCATTCGATCACGGCG
CAGCAGCAGCCGCCGCGGCGTCATTTGACGACGCCGCCGCGTGGTGCGCG
GTCGCGGTCGGCGCGGCGCTGCAGGGCGCGGACGACGCGCACGTTCGCGC
GTACGCGCGGCGCTCCGCAGCCGCCGCCGCTGCTGCCGCACACGGCGGCG
GCGGCGCGCAGGACACGGACGCGGCGCTGCTGGGGCGCGTCCGCCTCCAG
CTGCTGCGCTCATGCGTTGCCGACTGCCTCGGCGACGCCGCCGGCTTTGC
CGCGGAGACGGCGGCGGCGGGCGCGCTGTGGGACCGGCTCGCGGCGCGCG
CGCGCATGGGGTCTCAGACCGTCAGCGCCGGTGACACGGCCGCCGCCGTC
CGCTACCTGCTGCGCGCATCGCAGCTGCGCGCGGATTCGCCGTCGGCTTG
GGCGGCGGCGGTCGCGGACGCTGCCGGCGCGGCAGCAGCGCATGTGCCGC
CGGAGGAATGGGACGACGCGCGCGTTGACGCGCTGCTGCCGCCGCTGCCG
GCGGCGCTGCGCGCGCTCCCCGCGGCGCTGCTGCAGCCGCTGCAGCGGCG
CGACGCGCGCGCCTTTGTCGTCGCGCTGCAGGAGGCGCTGGCGGCGTCCG
CGTGCAGTCAGCTGAGGGGCGCGGCGGCGCCGCCGGGCGGCGACGTTCTA
GTGCATTGCGTGGAGGCGGTGCAGCTGGCGTTGAGCCTGCTGACGGCGGC
GCCGCAGGCGGCGCAATGCGGGGTGCTGCTGAGGACGGCGCTGTCTGGCT
GGCTTGGCTTCTTCAAGCTGCTCGTCGGCGACGAAGATGGCGCGCTGAGC
GCGCTGCGCGCCGCCGTCGTGGACTTCGAAGGCCTGCCCGGCGCCGCGCG
CTGGCCGCCCGCGGCGCACCAGCTCGAGGTTACAGCGCTGCTGCTGCTGC
GCCGCGGCCGCGCGCAGGAGTACAGGCGCCTGCGCGCCGTGCACGCCGCC
TTTGCGCGCGGCCGCGCGCCGCTGCCGCCCGCGGAGCGCTGCGAGCCGCG
CCGCGACGCGTGCGCGCACCCGCTGTGCCGCCACGTGCTGCTGCGCGCGG
GCGCGTTGCCGGCTGCAGCCGCGGGCTTCGGCGATCACGCGGAGCCGCGG
CAGCTGCCGTCGCCGCCACCGCAACTGCAGCAGCCGTTCTTGCAGCAGCT
GCTGCAGATGCCGTTCCCCATGCAGTCGTCGGCGGACGCGCAAGACGGCG
CAGGCTACGACATGGATGCTGCTGCGGTTCCGTGGCCACAGCACCAGTTC
CACTTTGGCGGCGACTGCAGCAGCGGCGGCGGCAGCAGCGACGCCTTGCA
GCAGCTGCTGGCGCCTGGCGCGCTGCCGCCGCCGCCGCACGCGCCGCTGC
AGCGGGACGCAGCAGCGGAATACGCTTACGGCGCTCGCCGCTGCAGCCTG
CCGGCAGTGCCGTTTGGCCATGCAGCCTCCAGCTGCGGCGGCATCGACGC
GGATGGCTGCCTCAGTGGCGAATGGCGGCACAGCAGCAGCCACTACCCCG
GCGAGCAGCTCGGCGGCACGGTGCGGCGCGCCAGCTTTGAGCCCATTGGC
AGTATGGATCTCTGCGGCAGCATCGAGCATCTCGGTGCCATGGAGCGGCG
CAGCAGCTTTGAGCCCAGCAGCAACGTTGAGCGTTGTGGCAGCATTGGGC
GTTGCAACAGCATCGAGCACCTTGGCAACGCCGGGCATCGCGGCGGCTCT
GAGCACCCCAGCAGCATTCAGCATCGCGGCAGCATCGAGCGCCGCGGCAG
TGCTGAGCACTTCGCCAGCAGCGCGCGCCGCACCAGCGCCACCAGCAGCA
GCAGCGACATGCCGCAGGCGCTGCTGCCGCCGCCGCCGCCGCTCGCCGGC
AGCGGCGCGGACGACGACTTTGCCTTCCTGGCGGCGACCGCGGACATCTT
CATGGGCGGCGAGGGCCCGCTGGACGCGCTCGACGTGACGGACGCGGCGT
TCGAGCCGCCGTCCGGCGATGCCATGCCGCTCGCGCTCGACCCGCAGCTG
TTCCCGTACCTCGACTGGGGGTGA