mRNA_8540 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|170043
Unique NamemRNA_8540
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|170043 vs. uniprot
Match: A0A836C9L4_9STRA (Hist_deacetyl domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9L4_9STRA)

HSP 1 Score: 1020 bits (2637), Expect = 0.000e+0
Identity = 525/525 (100.00%), Postives = 525/525 (100.00%), Query Frame = 1
Query:    1 MQHGAALSAPNNDGDTPLHFASMWARPQAVQALLECGAAYGARNRRSRAPLEVAAAALAGSAPEEVHAAREAVRAAFYTSEPRLRTLVAHHPECQEHQPRNATDWECPARIDAIMERLTGGALFRAYELDVTTNFKRAPAAALRRVHTADYLKFVDGLSRELGAAGAPAAVPFTPMVQRDLMRKAEVKPHEFCDTSFSAGSLGAARRAAGAVVAAVDSVLAGRHRNAFCAVRPPGHHAGPDGLLEAAASCGFCIFNNVAVGALHALEAHGLARVAIVDTDVHHGNGTEEIVRAYCQPSKLLFYSIHLFDKEGGDGKSDESESYSYQFFPGSGSVDDTALNIINAPVQPLWRSRGGRSTKTRSXXXXXXXXXXXXGRGSWREAIMARLLPTLRAFNPQLILMSSGFDAVEGDVGNARHARGKCAGTDLTPADYAWITERIQEVADMCCDGRLVSVLEGGYGRPHLDPPDDRRHSRVATASATAPAVAASFSSSATAALRELQSTDSPTTTDDEGGDKPMEVCLCFV 1575
            MQHGAALSAPNNDGDTPLHFASMWARPQAVQALLECGAAYGARNRRSRAPLEVAAAALAGSAPEEVHAAREAVRAAFYTSEPRLRTLVAHHPECQEHQPRNATDWECPARIDAIMERLTGGALFRAYELDVTTNFKRAPAAALRRVHTADYLKFVDGLSRELGAAGAPAAVPFTPMVQRDLMRKAEVKPHEFCDTSFSAGSLGAARRAAGAVVAAVDSVLAGRHRNAFCAVRPPGHHAGPDGLLEAAASCGFCIFNNVAVGALHALEAHGLARVAIVDTDVHHGNGTEEIVRAYCQPSKLLFYSIHLFDKEGGDGKSDESESYSYQFFPGSGSVDDTALNIINAPVQPLWRSRGGRSTKTRSXXXXXXXXXXXXGRGSWREAIMARLLPTLRAFNPQLILMSSGFDAVEGDVGNARHARGKCAGTDLTPADYAWITERIQEVADMCCDGRLVSVLEGGYGRPHLDPPDDRRHSRVATASATAPAVAASFSSSATAALRELQSTDSPTTTDDEGGDKPMEVCLCFV
Sbjct:    1 MQHGAALSAPNNDGDTPLHFASMWARPQAVQALLECGAAYGARNRRSRAPLEVAAAALAGSAPEEVHAAREAVRAAFYTSEPRLRTLVAHHPECQEHQPRNATDWECPARIDAIMERLTGGALFRAYELDVTTNFKRAPAAALRRVHTADYLKFVDGLSRELGAAGAPAAVPFTPMVQRDLMRKAEVKPHEFCDTSFSAGSLGAARRAAGAVVAAVDSVLAGRHRNAFCAVRPPGHHAGPDGLLEAAASCGFCIFNNVAVGALHALEAHGLARVAIVDTDVHHGNGTEEIVRAYCQPSKLLFYSIHLFDKEGGDGKSDESESYSYQFFPGSGSVDDTALNIINAPVQPLWRSRGGRSTKTRSXXXXXXXXXXXXGRGSWREAIMARLLPTLRAFNPQLILMSSGFDAVEGDVGNARHARGKCAGTDLTPADYAWITERIQEVADMCCDGRLVSVLEGGYGRPHLDPPDDRRHSRVATASATAPAVAASFSSSATAALRELQSTDSPTTTDDEGGDKPMEVCLCFV 525          
BLAST of jgi.p|Trimin1|170043 vs. uniprot
Match: D8LG61_ECTSI (Hist_deacetyl domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG61_ECTSI)

HSP 1 Score: 449 bits (1155), Expect = 1.720e-149
Identity = 244/466 (52.36%), Postives = 299/466 (64.16%), Query Frame = 1
Query:   43 DTPLHFASMWARPQAVQALLECGAAYGARNRRSRAPLEVAAAALAGSAPEEVHAAREAVRAAFYTSEPRLRTLVAHHPECQEHQPRNATDWECPARIDAIMERLTGGALFRAYELDVTTNFKRAPAAALRRVHTADYLKFVDGLSRELGAAGAPAAVPFTPMVQRDLMRKAE--VKPHEFCDTSFS-----AGSLGAARRAAGAVVAAVDSVLAGRHRNAFCAVRPPGHHAGPDGLLEAAASCGFCIFNNVAVGALHALEAHGLARVAIVDTDVHHGNGTEEIVRAYCQPSKLLFYSIHLFDKEGGDGKSDESESYSYQFFPGSGSVDDTALNIINAPVQPLWRSR-----------GGRSTKTRSXXXXXXXXXXXXGRGSWREAIMARLLPTLRAFNPQLILMSSGFDAVEGDVGNARH-ARGKCAGTDLTPADYAWITERIQEVADMCCDGRLVSVLEGGYGR 1383
            D+ LHFAS W    AV+ LL  GA+   RN   R PL+VA    A     ++ + R  VR  F+  EPR RTLV HHP+C EHQP++  DWECP R+ +I++ L     F  +EL+VTT+F      +L RVHT  Y+KFVD + +      A  +VPFTPMVQ+ L++K +  VKP + CDTSFS     AGSL AARRAAGAV  AVD VLAG++RNAFCAVRPPGHHAG +GL+E + SCGFCIFNNVAVGA+HAL  H L RVAIVD DVHHGNGTEEI RAY  P++L F+S+HLFD+              Y+FFPGSG  DD   NIIN P+ PLW+S+           GGR  + R                    AI  RLLP LRAFNPQLI++S+GFDA +GDVGN +  AR    G DL+  DY W TE+IQ VAD+CC G++VSVLEGGYG+
Sbjct:    3 DSALHFASRWGGETAVRVLLAAGASADVRNSEGRNPLQVAGDGNASEGNPDMES-RYKVRREFFRQEPRNRTLVLHHPDCLEHQPKSDRDWECPERVVSIVDLLVKPRAFEHHELEVTTDFSAVNTESLMRVHTGPYIKFVDSMGKSFKGEDAGTSVPFTPMVQQHLLKKGQTDVKPKDTCDTSFSKGKYKAGSLKAARRAAGAVTHAVDRVLAGKNRNAFCAVRPPGHHAGANGLIENSVSCGFCIFNNVAVGAMHALGHHHLDRVAIVDIDVHHGNGTEEICRAYPDPNRLFFFSVHLFDR-----------GPMYEFFPGSGDQDDLQSNIINEPLDPLWKSKARHDDGYGAQGGGRQGRXRGGGARHPQPDVL--------AIQRRLLPALRAFNPQLIMLSAGFDAAKGDVGNCKQGARAAREGLDLSSEDYLWTTEKIQSVADICCGGKMVSVLEGGYGQ 448          
BLAST of jgi.p|Trimin1|170043 vs. uniprot
Match: D8LG60_ECTSI (Histone deactylase of possible bacterial origin with ankyrin repeats at the N-terminus n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG60_ECTSI)

HSP 1 Score: 456 bits (1172), Expect = 6.550e-140
Identity = 246/474 (51.90%), Postives = 304/474 (64.14%), Query Frame = 1
Query:   19 LSAPNNDGDTPLHFASMWARPQAVQALLECGAAYGARNRRSRAPLEVAAAALAGSAPEEVHAAREAVRAAFYTSEPRLRTLVAHHPECQEHQPRNATDWECPARIDAIMERLTGGALFRAYELDVTTNFKRAPAAALRRVHTADYLKFVDGLSRELGAAGAPAAVPFTPMVQRDLMRKAE--VKPHEFCDTSFS-----AGSLGAARRAAGAVVAAVDSVLAGRHRNAFCAVRPPGHHAGPDGLLEAAASCGFCIFNNVAVGALHALEAHGLARVAIVDTDVHHGNGTEEIVRAYCQPSKLLFYSIHLFDKEGGDGKSDESESYSYQFFPGSGSVDDTALNIINAPVQPLWRSR-----------GGRSTKTRSXXXXXXXXXXXXGRGSWREAIMARLLPTLRAFNPQLILMSSGFDAVEGDVGNARH-ARGKCAGTDLTPADYAWITERIQEVADMCCDGRLVSVLEGGYGR 1383
            ++  N +GD+ LHFAS W    AV+ LL  GA+   RN   R PL+VA    A     ++ + R  VR  F+  EPR RTLV HHP+C EHQP++  DWECP R+ +I++ L     F  +EL+VTT+F      +L RVHT  Y+KFVD + +      A  +VPFTPMVQ+ L++K +  VKP + CDTSFS     AGSL AARRAAGAV  AVD VLAG++RNAFCAVRPPGHHAG +GL+E + SCGFCIFNNVAVGA+HAL  H L RVAIVD DVHHGNGTEEI RAY  P++L F+S+HLFD+              Y+FFPGSG  DD   NIIN P+ PLW+S+           GGR  + R                    AI  RLLP LRAFNPQLI++S+GFDA +GDVGN +  AR    G DL+  DY W TE+IQ VAD+CC G++VSVLEGGYG+
Sbjct: 1619 INCKNEEGDSALHFASRWGGETAVRVLLAAGASADVRNSEGRNPLQVAGDGNASEGNPDMES-RYKVRREFFRQEPRNRTLVLHHPDCLEHQPKSDRDWECPERVVSIVDLLVKPRAFEHHELEVTTDFSAVNTESLMRVHTGPYIKFVDSMGKSFKGEDAGTSVPFTPMVQQHLLKKGQTDVKPKDTCDTSFSKGKYKAGSLKAARRAAGAVTHAVDRVLAGKNRNAFCAVRPPGHHAGANGLIENSVSCGFCIFNNVAVGAMHALGHHHLDRVAIVDIDVHHGNGTEEICRAYPDPNRLFFFSVHLFDR-----------GPMYEFFPGSGDQDDLQSNIINEPLDPLWKSKARHDDGYGAQGGGRQGRXRGGGARHPQPDVL--------AIQRRLLPALRAFNPQLIMLSAGFDAAKGDVGNCKQGARAAREGLDLSSEDYLWTTEKIQSVADICCGGKMVSVLEGGYGQ 2072          
BLAST of jgi.p|Trimin1|170043 vs. uniprot
Match: A0A835YI51_9STRA (Histone deacetylase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YI51_9STRA)

HSP 1 Score: 397 bits (1020), Expect = 6.240e-132
Identity = 206/276 (74.64%), Postives = 230/276 (83.33%), Query Frame = 1
Query:  571 EFCDTSFSAGSLGAARRAAGAVVAAVDSVLAGRHRNAFCAVRPPGHHAGPDGLLEAAASCGFCIFNNVAVGALHALEAHGLARVAIVDTDVHHGNGTEEIVRAYCQPSKLLFYSIHLFDKEGGDGKSDESESYSYQFFPGSGSVDDTALNIINAPVQPLWRSRGGRSTKTRSXXXXXXXXXXXXGRGSWREAIMARLLPTLRAFNPQLILMSSGFDAVEGDVGNARHARGKCAGTDLTPADYAWITERIQEVADMCCDGRLVSVLEGGYGRPHLDP 1398
            +FCDTSFS+GSL AARRAAGAV AAVD+V++GR+RNAFCAVRPPGHHAGP+GLLEAA SCGFCIFNNVAVGALHALE HGL +VAIVDTDV   +  +EIVRAY QPSKLLFYS+HLFDKE  +GK++E     Y+FFPGSG+ DDTALNIIN PVQPLWR++GGR      X           GR ++REAI ARLLP LRAFNPQLILMSSGFDAVEGDVGNA+HAR   AG DLTP+DYAWITER+QEVADMCC+GRLVSVLEGGYGRP L P
Sbjct:   13 QFCDTSFSSGSLRAARRAAGAVTAAVDAVVSGRYRNAFCAVRPPGHHAGPNGLLEAAVSCGFCIFNNVAVGALHALETHGLEKVAIVDTDV---SAPQEIVRAYRQPSKLLFYSVHLFDKEH-EGKAEEGM---YEFFPGSGAGDDTALNIINVPVQPLWRAKGGRGGGG-XXRGGPPGVANGSGRAAFREAITARLLPALRAFNPQLILMSSGFDAVEGDVGNAKHARHSHAGCDLTPSDYAWITERVQEVADMCCEGRLVSVLEGGYGRPPLVP 280          
BLAST of jgi.p|Trimin1|170043 vs. uniprot
Match: B7FXN5_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FXN5_PHATC)

HSP 1 Score: 393 bits (1009), Expect = 2.090e-121
Identity = 238/500 (47.60%), Postives = 285/500 (57.00%), Query Frame = 1
Query:  130 NRRSRAPLEVAAAALAGSAP--------EEVHAAREAVRAAFYTSEPRLRTLVAHHPECQEHQPRNATDWECPARIDAIMERL------TGGALFRA---YELDVTTNFKRAPAAALRRVHTADYLKFVDGLSREL-------------------GAAGAPAAVPFTPMVQRDLMR--KAEVKPHEFCDTSFSAGSLGAARRAAGAVVAAVDSVLAGRHRNAFCAVRPPGHHAGPDGLLEAAASCGFCIFNNVAVGALHALEAHGL--ARVAIVDTDVHHGNGTEEIVRAYCQPSKLLFYSIHLFDKEGGDGKSDESESYSYQFFPGSGSVDDTALNIINAPVQPLWRSRGG------------RSTKTRSXXXXXXXXXXXX-----------------------------GRGSWREAIMARLLPTLRAFNPQLILMSSGFDAVEGDVGNARHARG-KCAGTDLTPADYAWITERIQEVADMCCDGRLVSVLEGGYGR 1383
              RS A L VA  +  G  P        +E  + R   RAA      + RTLV HHPEC EH P++ATDWE P RI +IM R+      TG         +E+ V+  F+RA    L RVH+ DYL FV+ LS++L                   G    P  VPFTP+VQR L++  ++ +K     DTSFSAGSL AARRAAGAV  AVD VL GR+RNAFC VRPPGHHAG +GLL+   SCGFCIFNNVA GAL+A+    L   R AIVD DVHHGNGTE+IVR    PSKLLF+SIHL+D    D K   S  +SY+F+PG+GS DD ALNIIN P+ PLW+                R T+T                                           GR ++R AI  RLLP LRAFNP LIL+S+GFDA +GDVGNARH RG +  G DL P DYAW T +I E+AD+CC GR+VSVLEGGYGR
Sbjct:  623 EERSLAVLRVAEQSYRGIKPSKALKKRLKETASERRDARAALLIRSAQSRTLVLHHPECLEHHPKSATDWEAPDRIRSIMRRVLPASDPTGATETSGIFPHEVTVSKEFERAKLDLLSRVHSTDYLSFVNALSKDLEKQLRESGGSFSAMDESDNGFGSPPPVVPFTPLVQRSLIKVDESRIKLGVNSDTSFSAGSLRAARRAAGAVQHAVDCVLVGRNRNAFCVVRPPGHHAGINGLLDGGESCGFCIFNNVAAGALYAISEDRLLCGRCAIVDIDVHHGNGTEDIVRKCHDPSKLLFFSIHLYDN---DRKKRGSNQFSYKFYPGTGSEDDLALNIINVPIVPLWKEHSATVQPSIKTHNTRRKTRTSQEGPDEESDTTPKDSSRTSDVGXXXXXXXXSNSSPRPGGLSSGRTAYRNAIQNRLLPALRAFNPDLILISAGFDAAKGDVGNARHERGGEKVGLDLEPEDYAWTTRKILEIADICCQGRVVSVLEGGYGR 1119          
BLAST of jgi.p|Trimin1|170043 vs. uniprot
Match: A0A1Z5JSY0_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JSY0_FISSO)

HSP 1 Score: 391 bits (1005), Expect = 8.860e-121
Identity = 227/459 (49.46%), Postives = 278/459 (60.57%), Query Frame = 1
Query:  205 AREAVRAAFYTSEPRLRTLVAHHPECQEHQPRNATDWECPARIDAIMERL------TGGALFRA---YELDVTTNFKRAPAAALRRVHTADYLKFVDGLSRELGAAGA----------------PAAVPFTPMVQRDLMR--KAEVKPHEFCDTSFSAGSLGAARRAAGAVVAAVDSVLAGRHRNAFCAVRPPGHHAGPDGLLEAAASCGFCIFNNVAVGALHALEAHGLA--RVAIVDTDVHHGNGTEEIVRAYCQPSKLLFYSIHLFDKEGGDGKSDESESYSYQFFPGSGSVDDTALNIINAPVQPLWRSRGGRST---------KTRSXXXXXXXXXXXXGRGS---------------------------WREAIMARLLPTLRAFNPQLILMSSGFDAVEGDVGNARHARG-KCAGTDLTPADYAWITERIQEVADMCCDGRLVSVLEGGYGR 1383
            AR   RA      P+ R+LV HHPEC EH P+++TDWE P RI AI+ R+      TG A       +E+ V+  F RA  + L RVH+ +YL FV+ LS +L                     P  VPFTP+VQR +++  ++ VK     DTSFS+GSL AARRAAG+V  AVD VL GR+RNAFC VRPPGHHAG +GLLE   SCGFCIFNNVA GAL+A+    L   R AIVD DVHHGNGTEEIVR    PSKL F+SIHL+D +   GK      + Y+F+PG+GS DD ALNIIN P+ PLW+ +  +++         K +S            GRGS                           +REAI+ RLLP+LRAFNP LI++S+GFDA +GDVGNARH RG +  G DL P DYAW T +I EVADMCC GR+VSVLEGGYGR
Sbjct:  668 ARRESRANLLIRSPQSRSLVLHHPECLEHHPKSSTDWEAPDRITAIIRRVIPSFDSTGAAESSGIFPHEVVVSQEFDRATLSMLSRVHSTEYLSFVNNLSNDLKNQAREPLKNGEKNIEEDDCKPPVVPFTPLVQRTMIKVDESSVKLSANSDTSFSSGSLKAARRAAGSVQHAVDCVLVGRNRNAFCVVRPPGHHAGINGLLEGGESCGFCIFNNVAAGALYAISDDRLLCERCAIVDIDVHHGNGTEEIVRRCNDPSKLFFFSIHLYDNDKRKGKG----QFQYKFYPGTGSDDDLALNIINVPIVPLWKDQSSQASPVKTHNTRKKAKSTQDVVDDSSTGTGRGSDGASEGGSGSTSIGSPRHASGKSGRTAYREAILTRLLPSLRAFNPDLIIISAGFDACKGDVGNARHERGGEKMGLDLEPEDYAWTTRKILEVADMCCHGRVVSVLEGGYGR 1122          
BLAST of jgi.p|Trimin1|170043 vs. uniprot
Match: B8C5L2_THAPS (Histone deacetylase n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C5L2_THAPS)

HSP 1 Score: 375 bits (964), Expect = 1.530e-117
Identity = 232/488 (47.54%), Postives = 282/488 (57.79%), Query Frame = 1
Query:   85 AVQALLECGAAYGARNRRSRAPLEVAAAALAGSAPEEVHAA--------REAVRAAFYTSEPRLRTLVAHHPECQEHQPRNATDWECPARIDAIMERLTGGAL----------FRAYELDVTTNFKRAPAAALRRVHTADYLKFVDGLSREL---------------------GAAGAPAAVPFTPMVQRDLMRKAEV-KPHEFCDTSFSAGSLGAARRAAGAVVAAVDSVLAGRHRNAFCAVRPPGHHAGPDGLLEAAASCGFCIFNNVAVGALHAL--EAHG--LARVAIVDTDVHHGNGTEEIVRAYCQPSKLLFYSIHLFDKEGGDGKSDESESYSYQFFPGSGSVDDTALNIINAP-VQPLWRSRGGRSTKTRSXXXXXXXXXXXXGRGSWREAIMARLLPTLRAFNPQLILMSSGFDAVEGDVGNARHARG--KCAGTDLTPADYAWITERIQEVADMCCDGRLVSVLEGGYGR--PHLDPP 1401
            AVQ L+E GA     NR  R PL+VAA   AG   E   A         R ++R        + RTLV HH EC +H  ++  DWE P RID+IM  L+              F   E+ V+ +F+RA    L R+H+A+YL FV+ LS+EL                     G       VPFTPMVQR +M+ A V K     DTSFSAGSL AARRAAGAV  AVD VL GR+RNAFC VRPPGHHAG +GLL  A SCGFC+FNNVA GA+HAL  E H     R AIVD D HHGNGTEEIVR      +LLF+S+HL+D +    K  +   ++Y+F+PG+G+ DD A N+IN P   P +       T                GR ++R AI  RLLP LRAFNP LI+MS+GFDA  GDVGNARH  G  +  G DL P DYAW   ++ EVAD+CC+GR+VSVLEGGYGR  P + PP
Sbjct:  333 AVQVLVESGARTNIFNRNFRRPLDVAAEGFAGLEEEGSEAGKVVVDESERRSIRWNLLNFSSQCRTLVLHHQECLDHMTKSQHDWEVPDRIDSIMSSLSNRTSEQCLPSDNQNFNPCEVTVSNDFERATLELLSRIHSAEYLAFVNDLSKELERKRKQQLVEDTQAESSADADGVDKPMPVVPFTPMVQRKVMKGAVVAKEPGHSDTSFSAGSLKAARRAAGAVQHAVDCVLVGRNRNAFCVVRPPGHHAGINGLLSNAESCGFCLFNNVAAGAMHALSDEKHRPRCERCAIVDIDAHHGNGTEEIVRKCHDSGRLLFFSVHLYDHD----KPKKGNEFNYKFYPGTGAEDDVAHNVINLPSTSPHYPPHYLMGT----------------GRLAYRRAIQHRLLPALRAFNPDLIIMSTGFDAARGDVGNARHFVGGTEAMGFDLEPEDYAWTARKVCEVADICCNGRVVSVLEGGYGRTAPPIPPP 800          
BLAST of jgi.p|Trimin1|170043 vs. uniprot
Match: A0A6S8HTR1_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A6S8HTR1_9STRA)

HSP 1 Score: 381 bits (978), Expect = 4.910e-117
Identity = 236/537 (43.95%), Postives = 296/537 (55.12%), Query Frame = 1
Query:   82 QAVQALLECGAAYGARNRRSRAPLEVAAAALAG-------------------------SAPEEVHAAREAVRAAFYTSEPRLRTLVAHHPECQEHQPRNATDWECPARIDAIMERLTGGA-------LFRAYELDVTTNFKRAPAAALRRVHTADYLKFVDGLSREL---------GAAGAPA-AVPFTPMVQRDLMRKAE--VKPHEFCDTSFSAGSLGAARRAAGAVVAAVDSVLAGRHRNAFCAVRPPGHHAGPDGLLEAAASCGFCIFNNVAVGALHAL--EAHGLARVAIVDTDVHHGNGTEEIVRAYCQPSKLLFYSIHLFDKEGGDGKSDESESYSYQFFPGSGSVDDTALNIINAPVQPLWRSRGGRST------KTR--------------------------------------SXXXXXXXXXXXXGRGSWREAIMARLLPTLRAFNPQLILMSSGFDAVEGDVGNARHARG--KCAGTDLTPADYAWITERIQEVADMCCDGRLVSVLEGGYGR---PHLDPPDD 1407
            +AV  LL+ GA   A N + R P+++AA                              SA +  +A     R          RTLV HHPEC EH P++++DWE P R+  I+E L              A+E+ ++T F+RA    L+RVH A+YL FV  LS++L           +  PA  VPFTPMVQR +++  E  VK     DT+FSAGSL AARRAAGAV  AVD VL GR+RNAFC VRPPGHHAG +GLL+   SCGFCIFNNVA GAL+A+  E     R AIVD DVHHGNGTEEI+R +  PS+L F+SIHL+D    D +      + Y+F+PG+GS DD ALNI+N P+QPLWR +   +T       TR                                                   GR ++R+AI  RLLP LRAFNP LIL+S+GFDA  GDVGNARH RG  +  G DL   DYAW T +I E+AD+CC GR+VSVLEGGYGR   P +D P++
Sbjct:  570 EAVALLLDSGARANALNNKCRRPVDLAADGFMDEEHSIAFLRARDARDHHKKFSKELKSALKHKNAEMRECRKNLLERSVHSRTLVLHHPECLEHVPKSSSDWEAPDRVITILEHLASSMEEGCARPAVHAHEVTLSTEFERAKLDLLKRVHGAEYLSFVHDLSKDLERKIKGSHDDESDKPAPVVPFTPMVQRTMIKINEEHVKLGVNSDTAFSAGSLRAARRAAGAVQHAVDCVLVGRNRNAFCVVRPPGHHAGVNGLLDGGESCGFCIFNNVAAGALYAITNERDLCGRCAIVDIDVHHGNGTEEIIRKFSDPSRLFFFSIHLYDN---DNRKRAPNQFQYKFYPGTGSEDDLALNILNVPIQPLWRDQNPPATPALRTHNTRHKAKGAPKSTSDTQDDSSVGTPRGSAKNSDVEAGSMSAGSTTPQPGSGGSSGRVAYRQAIQNRLLPALRAFNPDLILISAGFDAARGDVGNARHERGGRERMGLDLESEDYAWTTRKILEIADICCHGRVVSVLEGGYGRSAPPSVDTPNE 1103          
BLAST of jgi.p|Trimin1|170043 vs. uniprot
Match: A0A7S3Q3P5_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q3P5_9STRA)

HSP 1 Score: 374 bits (960), Expect = 1.050e-114
Identity = 217/461 (47.07%), Postives = 266/461 (57.70%), Query Frame = 1
Query:  220 RAAFYTSEPRLRTLVAHHPECQEHQPRNATDWECPARIDAIMERLTGG--ALFRAYELDVTTNFKRAPAAALRRVHTADYLKFVDGLSRELGA-------AGAPAAVPFTPMVQRDLMRKAEVKPHEFCDTSFSAGSLGAARRAAGAVVAAVDSVLAGRHRNAFCAVRPPGHHAGPDGLLEAAASCGFCIFNNVAVGALHALEAHG----LARVAIVDTDVHHGNGTEEIVRAYCQPSKLLFYSIHLFDKEGGDGKSDESESYSYQFFPGSGSVDDTALNIINAPVQPLWRSR----------GGRSTKTR-------------------------------------------------SXXXXXXXXXXXXGRGSWREAIMARLLPTLRAFNPQLILMSSGFDAVEGDVGNARHAR-GKCA-GTDLTPADYAWITERIQEVADMCCDGRLVSVLEGGYG 1380
            RA F++  P+ RTLV HH EC +H P++ TDWE P RI +I+  L+       R  E+ V+  F RA    L RVH+A+YL FV+ LS+EL         A  P+ VPFTPMVQR +MR+  VK     DTSFSAGSL AARRAAGA+  AVD VL GR+RNAFC VRPPGHHAG +GLL+   SCGFCIFNNVA GA+HAL          R AIVD DVHHGNGTEEIV+    P +L F+S+HL+D    D K ++S  +  +F+PG+G  DD A N+IN P+ P+W+ R             +T+ +                                                              GR ++R+AI  RLLP LRAFNP LIL+S G DA  GDVGNARH R GK A G DLTP DYAW T +I EVAD+CC GR+VS+LEGGYG
Sbjct:  598 RANFFSHSPQSRTLVLHHSECLDHLPKSETDWEAPDRISSIINALSRNDEISIRENEIQVSQEFDRASLEFLSRVHSAEYLTFVNNLSKELEKRHNEETEASVPSVVPFTPMVQRTVMREPTVKKGSHSDTSFSAGSLRAARRAAGAIKHAVDCVLVGRNRNAFCIVRPPGHHAGINGLLDGGESCGFCIFNNVAAGAMHALSDENPRPNCERCAIVDIDVHHGNGTEEIVKKCDNPGRLFFFSVHLYDN---DKKKEKSNGF--KFYPGTGDEDDVAHNVINVPIAPMWKERKTNHSPSMAENRHNTRNKLKQKVDAVNKSPSMENTIEMGENSGSPEENFDAEKKNDAHVTQQQHQNDGQRQAPHSFLYGTGREAYRQAIQQRLLPALRAFNPDLILISLGLDASGGDVGNARHYRNGKEAQGIDLTPDDYAWSTRKIMEVADICCQGRVVSILEGGYG 1053          
BLAST of jgi.p|Trimin1|170043 vs. uniprot
Match: A0A7S4AC53_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AC53_9STRA)

HSP 1 Score: 374 bits (961), Expect = 5.890e-114
Identity = 219/459 (47.71%), Postives = 271/459 (59.04%), Query Frame = 1
Query:  208 REAVRAAFYTSEPRLRTLVAHHPECQEHQPRNATDWECPARIDAIMERLTGGAL------FRAYELDVTTNFKRAPAAALRRVHTADYLKFVDGLSREL----------------GAAGAPAAVPFTPMVQRDLMRKAE--VKPHEFCDTSFSAGSLGAARRAAGAVVAAVDSVLAGRHRNAFCAVRPPGHHAGPDGLLEAAASCGFCIFNNVAVGALHALEAHGLA--RVAIVDTDVHHGNGTEEIVRAYCQPSKLLFYSIHLFDKEGGDGKSDESESYSYQFFPGSGSVDDTALNIINAPVQPLWRSR-----GG-----RSTKTR-----------------------------SXXXXXXXXXXXXGRGSWREAIMARLLPTLRAFNPQLILMSSGFDAVEGDVGNARHARG--KCAGTDLTPADYAWITERIQEVADMCCDGRLVSVLEGGYGR 1383
            R   RA  +    + RTLV +HPEC EH P+   DWE P RI++IMER+ G  +          E+ ++  F+RA    L RVH+ +YL FV+ LS++L                  +G    VPFTPMVQR + +  E  VK  E  DTSFS GSL AARRAAGAV  AVD VL GRHRNAFC VRPPGHHAG +GLL+   SCGFCIFN+VA GA+HA+    L   R AIVD D HHGNGTEEIVR    P KL F+SIHL+D +   GK  E++S+ Y+F+PG+G  DD  LNIIN P+ PLW+       GG     R T+ R                             S            GR ++R++I +RLLP LRAFNP LIL+S+GFDA +GDVGNA+H  G  +  G DL P DYAW T ++ E+AD+CC GR+VSVLEGGYGR
Sbjct:  727 RREARANLFECSSQSRTLVLYHPECLEHIPKAEGDWENPDRINSIMERIKGIRIGSDIPSIYQREIQISKEFERANLDLLSRVHSTEYLNFVNELSKDLERQQKEQNANSGRNKDDTSGPAPVVPFTPMVQRSVTKVEESSVKISEHSDTSFSVGSLRAARRAAGAVQHAVDCVLVGRHRNAFCVVRPPGHHAGINGLLDGGESCGFCIFNSVAAGAMHAISDKRLMCERCAIVDFDAHHGNGTEEIVRKCHDPGKLFFFSIHLYDNDR-KGKR-ETKSFQYKFYPGTGDEDDLPLNIINVPITPLWKDSNQIPVGGTHNTRRQTRKRASQSDDGSSSETGTSRLSDAEVDPKLPRASSPTTSGSSGAGGGRQAYRKSIQSRLLPALRAFNPDLILISAGFDACKGDVGNAKHEIGGKEKMGIDLEPEDYAWTTSKVLEIADICCQGRVVSVLEGGYGR 1183          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|170043 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836C9L4_9STRA0.000e+0100.00Hist_deacetyl domain-containing protein n=1 Tax=Tr... [more]
D8LG61_ECTSI1.720e-14952.36Hist_deacetyl domain-containing protein n=1 Tax=Ec... [more]
D8LG60_ECTSI6.550e-14051.90Histone deactylase of possible bacterial origin wi... [more]
A0A835YI51_9STRA6.240e-13274.64Histone deacetylase domain-containing protein n=1 ... [more]
B7FXN5_PHATC2.090e-12147.60Predicted protein n=1 Tax=Phaeodactylum tricornutu... [more]
A0A1Z5JSY0_FISSO8.860e-12149.46Uncharacterized protein n=2 Tax=Fistulifera solari... [more]
B8C5L2_THAPS1.530e-11747.54Histone deacetylase n=1 Tax=Thalassiosira pseudona... [more]
A0A6S8HTR1_9STRA4.910e-11743.95Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
A0A7S3Q3P5_9STRA1.050e-11447.07Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A7S4AC53_9STRA5.890e-11447.71Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_68contigContig_68:661473..667340 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|170043|e_gw1.68.132.1
Descriptionspectrin binding
COG categoryI
Max annot lvl2759|Eukaryota
EggNOG OGsCOG0123@1|root,COG0666@1|root,KOG0724@1|root,KOG0724@2759|Eukaryota,KOG1343@2759|Eukaryota,KOG4177@2759|Eukaryota
Evalue1.07e-140
Seed ortholog2880.D8LG60
Hectar predicted targeting categoryother localisation
TranscriptId170365
TrackFilteredModels1
ProteinId170043
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|170043gene_8540Tribonema minus UTEX_B_3156 geneContig_68 661473..667340 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|170043Trimin1|170043|e_gw1.68.132.1Tribonema minus UTEX_B_3156 polypeptideContig_68 661473..667340 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_8540_7exon_8540_7Tribonema minus UTEX_B_3156 exonContig_68 661473..661701 -
exon_8540_6exon_8540_6Tribonema minus UTEX_B_3156 exonContig_68 661936..662192 -
exon_8540_5exon_8540_5Tribonema minus UTEX_B_3156 exonContig_68 662555..662781 -
exon_8540_4exon_8540_4Tribonema minus UTEX_B_3156 exonContig_68 663683..663974 -
exon_8540_3exon_8540_3Tribonema minus UTEX_B_3156 exonContig_68 665771..666049 -
exon_8540_2exon_8540_2Tribonema minus UTEX_B_3156 exonContig_68 666694..666894 -
exon_8540_1exon_8540_1Tribonema minus UTEX_B_3156 exonContig_68 667248..667340 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_8540CDS_8540Tribonema minus UTEX_B_3156 CDSContig_68 667248..667340 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_8540 ID=mRNA_8540|Name=jgi.p|Trimin1|170043|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1578bp|location=Sequence derived from alignment at Contig_68:661473..667340- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGCAGCACGGGGCAGCGCTGAGCGCGCCCAACAATGATGGGGACACGCC
GCTGCACTTCGCGTCCATGTGGGCGCGGCCGCAGGCAGTACAGGCCCTGC
TGGAGTGCGGCGCGGCGTACGGCGCGCGCAACCGCCGCAGCCGCGCGCCG
CTGGAAGTTGCGGCGGCAGCGCTAGCGGGGAGCGCGCCAGAGGAGGTGCA
CGCCGCGCGCGAGGCCGTGCGCGCGGCGTTCTACACCAGCGAGCCGCGCC
TGCGCACGCTGGTAGCGCACCACCCGGAGTGCCAGGAGCACCAGCCGCGC
AACGCGACGGACTGGGAGTGCCCCGCGCGCATCGACGCCATCATGGAGCG
CCTCACCGGCGGCGCGCTCTTCCGCGCGTACGAGCTCGACGTCACCACCA
ACTTCAAGCGCGCGCCCGCCGCCGCGCTGCGCCGCGTGCACACGGCGGAC
TACTTGAAGTTCGTGGACGGCCTCAGCAGGGAGCTGGGCGCGGCGGGGGC
GCCGGCGGCGGTGCCGTTCACGCCCATGGTGCAGCGCGACCTGATGCGCA
AGGCGGAGGTGAAGCCGCACGAGTTCTGCGACACGAGCTTCTCCGCGGGC
TCCCTCGGCGCCGCGCGCCGCGCCGCCGGCGCCGTCGTCGCCGCCGTCGA
CAGCGTGCTAGCGGGGCGCCACCGCAACGCCTTCTGCGCAGTGCGCCCGC
CCGGGCACCACGCGGGCCCCGACGGCCTGCTGGAGGCCGCGGCGAGCTGC
GGCTTCTGTATCTTCAACAATGTCGCGGTGGGGGCGCTGCACGCGCTGGA
GGCGCATGGGCTGGCGCGCGTGGCGATCGTGGACACGGACGTGCACCACG
GCAACGGCACCGAAGAGATCGTGCGCGCGTACTGCCAGCCCTCCAAGCTG
CTCTTCTACTCCATCCACCTCTTCGACAAGGAGGGGGGGGACGGCAAGTC
GGACGAGTCAGAGTCGTACTCGTACCAGTTCTTCCCCGGCAGCGGCTCTG
TTGATGATACAGCGCTCAACATCATCAACGCGCCCGTTCAGCCGCTCTGG
CGCTCCAGGGGGGGGCGCTCGACCAAGACGCGCAGCGCTCAGGCGGCAGC
AGCATCGGCGGCGGCGGCGGCCGGGCGCGGCAGCTGGCGCGAGGCCATCA
TGGCACGCCTGCTGCCCACGCTGCGCGCCTTTAACCCGCAGCTCATCCTC
ATGAGCAGCGGCTTTGACGCGGTGGAGGGAGACGTTGGCAACGCTCGGCA
CGCACGCGGCAAGTGCGCGGGCACGGACCTCACGCCCGCAGACTATGCCT
GGATCACGGAGCGTATTCAGGAGGTGGCGGACATGTGCTGCGATGGGAGG
CTAGTCTCCGTTCTTGAGGGAGGCTACGGCAGGCCCCATCTGGACCCCCC
TGACGACCGCCGCCACTCGCGCGTTGCAACGGCATCCGCAACGGCGCCAG
CGGTGGCGGCCTCCTTTTCGTCGTCGGCGACGGCGGCGCTGCGGGAGCTG
CAGAGCACGGACTCTCCCACTACCACGGATGATGAGGGGGGTGACAAGCC
GATGGAGGTATGTTTATGTTTTGTATGA
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protein sequence of jgi.p|Trimin1|170043

>Trimin1|170043|e_gw1.68.132.1 ID=Trimin1|170043|e_gw1.68.132.1|Name=jgi.p|Trimin1|170043|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=526bp
MQHGAALSAPNNDGDTPLHFASMWARPQAVQALLECGAAYGARNRRSRAP
LEVAAAALAGSAPEEVHAAREAVRAAFYTSEPRLRTLVAHHPECQEHQPR
NATDWECPARIDAIMERLTGGALFRAYELDVTTNFKRAPAAALRRVHTAD
YLKFVDGLSRELGAAGAPAAVPFTPMVQRDLMRKAEVKPHEFCDTSFSAG
SLGAARRAAGAVVAAVDSVLAGRHRNAFCAVRPPGHHAGPDGLLEAAASC
GFCIFNNVAVGALHALEAHGLARVAIVDTDVHHGNGTEEIVRAYCQPSKL
LFYSIHLFDKEGGDGKSDESESYSYQFFPGSGSVDDTALNIINAPVQPLW
RSRGGRSTKTRSAQAAAASAAAAAGRGSWREAIMARLLPTLRAFNPQLIL
MSSGFDAVEGDVGNARHARGKCAGTDLTPADYAWITERIQEVADMCCDGR
LVSVLEGGYGRPHLDPPDDRRHSRVATASATAPAVAASFSSSATAALREL
QSTDSPTTTDDEGGDKPMEVCLCFV*
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mRNA from alignment at Contig_68:661473..667340-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_8540 ID=mRNA_8540|Name=jgi.p|Trimin1|170043|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=5868bp|location=Sequence derived from alignment at Contig_68:661473..667340- (Tribonema minus UTEX_B_3156 )
ATGCAGCACGGGGCAGCGCTGAGCGCGCCCAACAATGATGGGGACACGCC GCTGCACTTCGCGTCCATGTGGGCGCGGCCGCAGGCAGTACAGGTGCAGT ACACAATTTTACGTGTACTCTGATGTGTACATGGCACATGTAGGCCGCTG CGTGCGCAATTGATGCACACATATTTGAAAGAATGGGGACATGCAACAAG CAGGTAAAAGTGTGAAGCGTTGACTTTAATGCTCAAATGAGGCAGCAGCA GTGGAGCACATCATTCGTTGGTCGGCTCAGACCGACACCACGACACCAGA CCAGCCGCGCAGCCGCCATTCTCCCCTCATCACTTGAAAGCACCAGGCTC CACCACAATGACTCCTCATCCGTGCCTCGCATCGCGCCCCGGTACCAGCG CCAAACCACACGCCGCAACACACACACGCATACCTACGTACCCCAGGCCC TGCTGGAGTGCGGCGCGGCGTACGGCGCGCGCAACCGCCGCAGCCGCGCG CCGCTGGAAGTTGCGGCGGCAGCGCTAGCGGGGAGCGCGCCAGAGGAGGT GCACGCCGCGCGCGAGGCCGTGCGCGCGGCGTTCTACACCAGCGAGCCGC GCCTGCGCACGCTGGTAGCGCACCACCCGGAGTGCCAGGAGCACCAGGTA TGTATGTACACATGAAAACGAATCAAAAGATCATAGAGCTCTAGGTGCTC GATTGTCCAACGCATCCGCCTGTAGATGTTAGAAAGAAATTGTGGACTTG TATCTGCGTACGCGCATTGCTGCTCCGCTGCCGCGCAACACCGCGGGTTG GGAGTGCCCTGCGCGCATACACAGCATTTTAGTTGACTTGTGCTCCTGTA TGTGGTAATCCAGTGAAAATTGCCACCAAACTTGTCCTTGCGCGCACACT GCTGCCCGCCGCCGCGCAACGCGACCTACTGCGAGTGCTCTGCGCGCATA CAAAGCCAAACTATTGATTGGCATGTGCTCCTGTTTGTGGTGATATAGCA GTTGTCTCTTTTAAACTTGCCCCTGCGCGCACACCGCAGCCCCGCGCAAC GCGACGGACTGGGAGTGCCCTGCGTGCATACCAACTATTGCTTGACGTGT GCTCCTGTATGTGCTAGCCACAGTGAAGTCTGCCACCGAACTCGTCCTTG CATGCATACTGCTGCTCCGCAGCCGCGCAACGGGATGCCCTGAATGCATA CGCCTCCAGACCATCATCTGCCGTGTGTTCCTGTTGGTGGAGATACAGTT GCAGTTGTAACTTGAAGTTGCCCTTTGCGCGCGCACCGCAGCCGCGCAAC GCGACGGACTGGGAGTGCCCCGCGCGCATCGACGCCATCATGGAGCGCCT CACCGGCGGCGCGCTCTTCCGCGCGTACGAGCTCGACGTCACCACCAACT TCAAGCGCGCGCCCGCCGCCGCGCTGCGCCGCGTGCACACGGCGGACTAC TTGAAGTTCGTGGACGGCCTCAGCAGGGAGCTGGGCGCGGCGGGGGCGCC GGCGGCGGTGCCGTTCACGCCCATGGTGCAGCGCGACCTGATGCGCAAGG CGGAGGTGAAGCCGCACGAGGTGGGTGAGCCCTAGGATAAGGGCTTGAGG TTAGGGTGAAAATTGGATCCAGGCTATATACATACACATATACAGAACTA TGTCTACTTTACATTTCGTACTTCGAAGTATATAGTTGATCGCGGTGCGT GACTGCGGTGTAGGGGTGCGTGCAAGGCGCGGCCGCGCGTGATTGCAATC GTAGGCGGCATCATAGTTGAAGTTTTGCGTGCTTGAAGCAGCGGACCGGC CGCACCGTGTGTGGTGCGGCGAGCTCGCTGCAAGCAGCAGAGACGCAACC ACATGACGTATGGTAGCTAATTTGCGAGGGCAAGCGCGCTGCGCTTGCTG TTGAGCACTTCAACAAGTCACAAGCTGCACCCGAGGGCAGTGTTGGCCCC TTCCCGCAGTCCTGCAACCTGCGGCTGTGCGCACGCTGCTGCGACGCAGC GTCAGTGCTGCCCGCGCCGCGAGAGCATTGAAAAACGCTCCTCGCCACTA TTACGGGAGTGGCTAAAAAAACATTAGACGTCCGTGGCACCCGGCAAGCG GAGCGGGCCAGTGATGCGAGCCCGTACAAAGCGGTGTGAGACCGGGCAGC GGCGATGCAGCTGAATAGGGTTTGACGTCACCAAATCTGCCCAGGACGGC AACTGCTCTACGGCGAGCGAGCGCACGCAGCTGCCATACATACTGTATGT ATGGCCATGATAACGGGTACGCCACGATACAGCGTGCGCCAGCTCACCGT AGAAGCAGTTGCCGTCCTGGGCAGGGTTGGTGACGTCGAACCCTGTTAAG CTTCATCGCCGCTGCCCAGTCTCGCACCTCTTTGTACGGGCACACAGCAC TGGCCCGCTCCGCTCACTGGGTACCGCTGACGTCTGATGATGTCAGCCAC TCCCATGATAGTGGTGATGGTGAGGAGCGTTTTTCAACGCTGTCGCGGCA CGGGCAGCACTGACGCTGTGCGAAAACCACAGAGCGTGCCAGTTTACGCT GCGCCGTATGCGCTTACGAGCACCTTAGCAGGCCACTTCGGCGCTGCGCG TCGCGCCGCTGGCGCCGTGCTGTAGCAACATCAAAGTTATCAGCTCACGT ATGCCATCACTGAGATATCCTTTGGGGTACTGTGAAAAAGGTTCATAAGA TCATAGAGCTCTGCTAGGAGTGACAAAGAGTGGTAAGCCGCAAGTGCCTT CCACCAATGACCGTGGTTGCTGCAGCTGCAGTCATTGGCCACATGTCAAA CATTGCCACCTTATCCACAGTAGTCAAAAAAGCCTTCTGTGTGCAAGCTT GTAGCGTTCGAGGCATGGGTGTTCAGTATGAAAGGGTCTCACGTGTTCGG TTGGCCAGTTGTATACGGACTCTGGCTCTGAGTAGTCCCTGCGCTGAACA CTTGCGCGGTTCTGTGACTTTGCTTGCGAACTGGCGCCGTATGCGCGGTA ACAACACCAATACCATTAGCACAAGTGTCTGATGCCTCGAGCACATACTT CAAAGTGAAGTTTCCGTCGATGATCACAACGTATGAGCCTCTATCCAATA TTTTTGATAGACTTGCGCTCTACTCCCCACGCTGACATGCACTTCCAGTT CTGCGACACGAGCTTCCGCGGGCTCCCTCGGCGCCGCGTGCCGCAGGAAT AGCACCAATTAATAGAAGCACTAATATCTGATCATTGAATACACACTTCC AAGTGAAATGAATTCCCCTTAAAGTACTTTTGTGTTGTGACCCCTCTGTA CGTAATTTCATCAAATGTTGAGGCTCAGGCCCTATTCGTTGCACACGCCA ACACCCTCCGGTGCAGTTCTGCGACACGAGCTTCTCCGCGGGCTCCCTCG GCGCCGCGCGCCGCGCCGCCGGCGCCGTCGTCGCCGCCGTCGACAGCGTG CTAGCGGGGCGCCACCGCAACGCCTTCTGCGCAGTGCGCCCGCCCGGGCA CCACGCGGGCCCCGACGGCCTGCTGGAGGCCGCGGCGAGCTGCGGCTTCT GTATCTTCAACAATGTCGCGGTGGGGGCGCTGCACGCGCTGGAGGCGCAT GGGCTGGCGCGCGTGGCGATCGTGGACACGGACGTGCACCACGGCAACGG CACCGAAGGTACGTACGTTGCTCAGGGGGAAGGGTTGTTGGTCGCCTGCT AATAGCATTGTTGTGGAAGATAGTGCATGATTTGAGCGCTGCGTTGCACG CGCTGGAGGCGCACGGTCTGGCGCGCGTGGCAATTGTGGACACGGACGTG CATCACGGCAACGGCACCGAAGGTAGGGGAGGGGGTAGCTTCACGGCGTT TAGCACACTTCAAAGCTCTCACCTACAGCATGTACGTCTCAAAGAGAGCT TGCACCTCGTCTTCGAACTGCATGCTCAAACCTCAACAGCGCTCTCCTTG CAGTAGCAGCAGCGGTGGCAGCAGAACGAGCAGCAGGAGTACTTGACTCT CCGCACAGCGGACTGCGTGTCTATCATGGTACCTTGTCAAGGTGCCGGGA GGGGGGGGGGGGAGGAGGGCTGCGTCGTGGAGGGGGAGGGGTCGTCGCTC GCCTGCTAATAGCATTGTTGTGGAAGATAGTGCGTGGTTTGAGTGCTCGA GGCGGCGGCGGCGGTGTGCCGGAGACTAAAAGTGTGTGGGATAATTGTGC GCTGCGCGCGGTGTCTTGCTTGTTGTATGCATTCTCTTGGTTACGGCTTA TGGCGGTAAAACATCCCTTGATCGTCAACTTTTGAATTTCTACAGCGACA GCCCAGGTGCCATGTCACACTCGCCTTCTCCTGCGCTGACACTGATGGTA TGTACGTATACATTGCGCCATTGCAGAGATCGTGCACGTGTACTGCTGAC AACGATTGTATATATGTATACCGCATGCCGTCGCAGAGATCGTGCGCGCG AACGCTGACAACAATGGTATGTAGGTATCCCGCGTGCCACCGCAGAGATT GTGTGCGCCTACTGCTGACAACGACTGTCTATATGTATACCGTGTGTTTG CCACCGCAGAGATCGTGCGCGCGTACTGCCAGCCCTCCAAGCTGCTCTTC TACTCCATCCACCTCTTCGACAAGGAGGGGGGGGACGGCAAGTCGGACGA GTCAGAGTCGTACTCGTACCAGTTCTTCCCCGGCAGCGGCTCTGTTGATG ATACAGCGCTCAACATCATCAACGCGCCCGTTCAGCCGCTCTGGCGCTCC AGGGGGGGGCGCTCGACCAAGACGCGCAGCGCTCAGGTAAAGCCCTTATT AATGTGTTTCTGGCATGCTGTATGGGATGACCGTGTATCGATGTGATTTG CCGTCATACCGCTCCTGTGGTGTGGCGACGCATTTGTACTGTGTAGCAGG GTGCATTTGTACAACGTTTTAGCAGTGAGTGACATGATGACACAGCACTC ACCCCACGGTCAGCTCAGCTGCAGTGGGGGGGGGGCATACTGTCCTGCTT TGTTACTGTTGTCTTGCTTAGAAGCATATGTTATCGGTGCAGCAAATGTG GACCTAGCGTGAGCATGTCCTCCAGTGGGGGCGGCCCACCCTAAGGTGCA TGCGCAAGGGTATTTTGAGCCACAACCCCAATTTTGCCCGCTTTCCAGGC GGCAGCAGCATCGGCGGCGGCGGCGGCCGGGCGCGGCAGCTGGCGCGAGG CCATCATGGCACGCCTGCTGCCCACGCTGCGCGCCTTTAACCCGCAGCTC ATCCTCATGAGCAGCGGCTTTGACGCGGTGGAGGGAGACGTTGGCAACGC TCGGCACGCACGCGGCAAGTGCGCGGGCACGGACCTCACGCCCGCAGACT ATGCCTGGATCACGGAGCGTATTCAGGAGGTGGCGGACATGTGCTGCGAT GGGAGGTGGGTGACGTGCCTACTGCAACTTCCCCATGTTATACTTTAAGT ACTTCATTGAACTACACAGGAGATGATGTGATTGTGCGCGGCCAATCACT GTCGGCATGCGCTCGGGTATCGTGCTCTCTCACGCCCTCAGTGCACCAGG TTCACGCATTCAGCACGCACGTAAAGCACTGCATTGCCCGTGGACATTAG CTGCGTTGCTCAATGCTTGCTATTTTGATGCACACGCAGGCTAGTCTCCG TTCTTGAGGGAGGCTACGGCAGGCCCCATCTGGACCCCCCTGACGACCGC CGCCACTCGCGCGTTGCAACGGCATCCGCAACGGCGCCAGCGGTGGCGGC CTCCTTTTCGTCGTCGGCGACGGCGGCGCTGCGGGAGCTGCAGAGCACGG ACTCTCCCACTACCACGGATGATGAGGGGGGTGACAAGCCGATGGAGGTA TGTTTATGTTTTGTATGA
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Coding sequence (CDS) from alignment at Contig_68:661473..667340-

>mRNA_8540 ID=mRNA_8540|Name=jgi.p|Trimin1|170043|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1578bp|location=Sequence derived from alignment at Contig_68:661473..667340- (Tribonema minus UTEX_B_3156 )
ATGCAGCACGGGGCAGCGCTGAGCGCGCCCAACAATGATGGGGACACGCC
GCTGCACTTCGCGTCCATGTGGGCGCGGCCGCAGGCAGTACAGGCCCTGC
TGGAGTGCGGCGCGGCGTACGGCGCGCGCAACCGCCGCAGCCGCGCGCCG
CTGGAAGTTGCGGCGGCAGCGCTAGCGGGGAGCGCGCCAGAGGAGGTGCA
CGCCGCGCGCGAGGCCGTGCGCGCGGCGTTCTACACCAGCGAGCCGCGCC
TGCGCACGCTGGTAGCGCACCACCCGGAGTGCCAGGAGCACCAGCCGCGC
AACGCGACGGACTGGGAGTGCCCCGCGCGCATCGACGCCATCATGGAGCG
CCTCACCGGCGGCGCGCTCTTCCGCGCGTACGAGCTCGACGTCACCACCA
ACTTCAAGCGCGCGCCCGCCGCCGCGCTGCGCCGCGTGCACACGGCGGAC
TACTTGAAGTTCGTGGACGGCCTCAGCAGGGAGCTGGGCGCGGCGGGGGC
GCCGGCGGCGGTGCCGTTCACGCCCATGGTGCAGCGCGACCTGATGCGCA
AGGCGGAGGTGAAGCCGCACGAGTTCTGCGACACGAGCTTCTCCGCGGGC
TCCCTCGGCGCCGCGCGCCGCGCCGCCGGCGCCGTCGTCGCCGCCGTCGA
CAGCGTGCTAGCGGGGCGCCACCGCAACGCCTTCTGCGCAGTGCGCCCGC
CCGGGCACCACGCGGGCCCCGACGGCCTGCTGGAGGCCGCGGCGAGCTGC
GGCTTCTGTATCTTCAACAATGTCGCGGTGGGGGCGCTGCACGCGCTGGA
GGCGCATGGGCTGGCGCGCGTGGCGATCGTGGACACGGACGTGCACCACG
GCAACGGCACCGAAGAGATCGTGCGCGCGTACTGCCAGCCCTCCAAGCTG
CTCTTCTACTCCATCCACCTCTTCGACAAGGAGGGGGGGGACGGCAAGTC
GGACGAGTCAGAGTCGTACTCGTACCAGTTCTTCCCCGGCAGCGGCTCTG
TTGATGATACAGCGCTCAACATCATCAACGCGCCCGTTCAGCCGCTCTGG
CGCTCCAGGGGGGGGCGCTCGACCAAGACGCGCAGCGCTCAGGCGGCAGC
AGCATCGGCGGCGGCGGCGGCCGGGCGCGGCAGCTGGCGCGAGGCCATCA
TGGCACGCCTGCTGCCCACGCTGCGCGCCTTTAACCCGCAGCTCATCCTC
ATGAGCAGCGGCTTTGACGCGGTGGAGGGAGACGTTGGCAACGCTCGGCA
CGCACGCGGCAAGTGCGCGGGCACGGACCTCACGCCCGCAGACTATGCCT
GGATCACGGAGCGTATTCAGGAGGTGGCGGACATGTGCTGCGATGGGAGG
CTAGTCTCCGTTCTTGAGGGAGGCTACGGCAGGCCCCATCTGGACCCCCC
TGACGACCGCCGCCACTCGCGCGTTGCAACGGCATCCGCAACGGCGCCAG
CGGTGGCGGCCTCCTTTTCGTCGTCGGCGACGGCGGCGCTGCGGGAGCTG
CAGAGCACGGACTCTCCCACTACCACGGATGATGAGGGGGGTGACAAGCC
GATGGAGGTATGTTTATGTTTTGTATGA
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