mRNA_8540 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|170043 vs. uniprot
Match: A0A836C9L4_9STRA (Hist_deacetyl domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9L4_9STRA) HSP 1 Score: 1020 bits (2637), Expect = 0.000e+0 Identity = 525/525 (100.00%), Postives = 525/525 (100.00%), Query Frame = 1 Query: 1 MQHGAALSAPNNDGDTPLHFASMWARPQAVQALLECGAAYGARNRRSRAPLEVAAAALAGSAPEEVHAAREAVRAAFYTSEPRLRTLVAHHPECQEHQPRNATDWECPARIDAIMERLTGGALFRAYELDVTTNFKRAPAAALRRVHTADYLKFVDGLSRELGAAGAPAAVPFTPMVQRDLMRKAEVKPHEFCDTSFSAGSLGAARRAAGAVVAAVDSVLAGRHRNAFCAVRPPGHHAGPDGLLEAAASCGFCIFNNVAVGALHALEAHGLARVAIVDTDVHHGNGTEEIVRAYCQPSKLLFYSIHLFDKEGGDGKSDESESYSYQFFPGSGSVDDTALNIINAPVQPLWRSRGGRSTKTRSXXXXXXXXXXXXGRGSWREAIMARLLPTLRAFNPQLILMSSGFDAVEGDVGNARHARGKCAGTDLTPADYAWITERIQEVADMCCDGRLVSVLEGGYGRPHLDPPDDRRHSRVATASATAPAVAASFSSSATAALRELQSTDSPTTTDDEGGDKPMEVCLCFV 1575 MQHGAALSAPNNDGDTPLHFASMWARPQAVQALLECGAAYGARNRRSRAPLEVAAAALAGSAPEEVHAAREAVRAAFYTSEPRLRTLVAHHPECQEHQPRNATDWECPARIDAIMERLTGGALFRAYELDVTTNFKRAPAAALRRVHTADYLKFVDGLSRELGAAGAPAAVPFTPMVQRDLMRKAEVKPHEFCDTSFSAGSLGAARRAAGAVVAAVDSVLAGRHRNAFCAVRPPGHHAGPDGLLEAAASCGFCIFNNVAVGALHALEAHGLARVAIVDTDVHHGNGTEEIVRAYCQPSKLLFYSIHLFDKEGGDGKSDESESYSYQFFPGSGSVDDTALNIINAPVQPLWRSRGGRSTKTRSXXXXXXXXXXXXGRGSWREAIMARLLPTLRAFNPQLILMSSGFDAVEGDVGNARHARGKCAGTDLTPADYAWITERIQEVADMCCDGRLVSVLEGGYGRPHLDPPDDRRHSRVATASATAPAVAASFSSSATAALRELQSTDSPTTTDDEGGDKPMEVCLCFV Sbjct: 1 MQHGAALSAPNNDGDTPLHFASMWARPQAVQALLECGAAYGARNRRSRAPLEVAAAALAGSAPEEVHAAREAVRAAFYTSEPRLRTLVAHHPECQEHQPRNATDWECPARIDAIMERLTGGALFRAYELDVTTNFKRAPAAALRRVHTADYLKFVDGLSRELGAAGAPAAVPFTPMVQRDLMRKAEVKPHEFCDTSFSAGSLGAARRAAGAVVAAVDSVLAGRHRNAFCAVRPPGHHAGPDGLLEAAASCGFCIFNNVAVGALHALEAHGLARVAIVDTDVHHGNGTEEIVRAYCQPSKLLFYSIHLFDKEGGDGKSDESESYSYQFFPGSGSVDDTALNIINAPVQPLWRSRGGRSTKTRSXXXXXXXXXXXXGRGSWREAIMARLLPTLRAFNPQLILMSSGFDAVEGDVGNARHARGKCAGTDLTPADYAWITERIQEVADMCCDGRLVSVLEGGYGRPHLDPPDDRRHSRVATASATAPAVAASFSSSATAALRELQSTDSPTTTDDEGGDKPMEVCLCFV 525
BLAST of jgi.p|Trimin1|170043 vs. uniprot
Match: D8LG61_ECTSI (Hist_deacetyl domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG61_ECTSI) HSP 1 Score: 449 bits (1155), Expect = 1.720e-149 Identity = 244/466 (52.36%), Postives = 299/466 (64.16%), Query Frame = 1 Query: 43 DTPLHFASMWARPQAVQALLECGAAYGARNRRSRAPLEVAAAALAGSAPEEVHAAREAVRAAFYTSEPRLRTLVAHHPECQEHQPRNATDWECPARIDAIMERLTGGALFRAYELDVTTNFKRAPAAALRRVHTADYLKFVDGLSRELGAAGAPAAVPFTPMVQRDLMRKAE--VKPHEFCDTSFS-----AGSLGAARRAAGAVVAAVDSVLAGRHRNAFCAVRPPGHHAGPDGLLEAAASCGFCIFNNVAVGALHALEAHGLARVAIVDTDVHHGNGTEEIVRAYCQPSKLLFYSIHLFDKEGGDGKSDESESYSYQFFPGSGSVDDTALNIINAPVQPLWRSR-----------GGRSTKTRSXXXXXXXXXXXXGRGSWREAIMARLLPTLRAFNPQLILMSSGFDAVEGDVGNARH-ARGKCAGTDLTPADYAWITERIQEVADMCCDGRLVSVLEGGYGR 1383 D+ LHFAS W AV+ LL GA+ RN R PL+VA A ++ + R VR F+ EPR RTLV HHP+C EHQP++ DWECP R+ +I++ L F +EL+VTT+F +L RVHT Y+KFVD + + A +VPFTPMVQ+ L++K + VKP + CDTSFS AGSL AARRAAGAV AVD VLAG++RNAFCAVRPPGHHAG +GL+E + SCGFCIFNNVAVGA+HAL H L RVAIVD DVHHGNGTEEI RAY P++L F+S+HLFD+ Y+FFPGSG DD NIIN P+ PLW+S+ GGR + R AI RLLP LRAFNPQLI++S+GFDA +GDVGN + AR G DL+ DY W TE+IQ VAD+CC G++VSVLEGGYG+ Sbjct: 3 DSALHFASRWGGETAVRVLLAAGASADVRNSEGRNPLQVAGDGNASEGNPDMES-RYKVRREFFRQEPRNRTLVLHHPDCLEHQPKSDRDWECPERVVSIVDLLVKPRAFEHHELEVTTDFSAVNTESLMRVHTGPYIKFVDSMGKSFKGEDAGTSVPFTPMVQQHLLKKGQTDVKPKDTCDTSFSKGKYKAGSLKAARRAAGAVTHAVDRVLAGKNRNAFCAVRPPGHHAGANGLIENSVSCGFCIFNNVAVGAMHALGHHHLDRVAIVDIDVHHGNGTEEICRAYPDPNRLFFFSVHLFDR-----------GPMYEFFPGSGDQDDLQSNIINEPLDPLWKSKARHDDGYGAQGGGRQGRXRGGGARHPQPDVL--------AIQRRLLPALRAFNPQLIMLSAGFDAAKGDVGNCKQGARAAREGLDLSSEDYLWTTEKIQSVADICCGGKMVSVLEGGYGQ 448
BLAST of jgi.p|Trimin1|170043 vs. uniprot
Match: D8LG60_ECTSI (Histone deactylase of possible bacterial origin with ankyrin repeats at the N-terminus n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG60_ECTSI) HSP 1 Score: 456 bits (1172), Expect = 6.550e-140 Identity = 246/474 (51.90%), Postives = 304/474 (64.14%), Query Frame = 1 Query: 19 LSAPNNDGDTPLHFASMWARPQAVQALLECGAAYGARNRRSRAPLEVAAAALAGSAPEEVHAAREAVRAAFYTSEPRLRTLVAHHPECQEHQPRNATDWECPARIDAIMERLTGGALFRAYELDVTTNFKRAPAAALRRVHTADYLKFVDGLSRELGAAGAPAAVPFTPMVQRDLMRKAE--VKPHEFCDTSFS-----AGSLGAARRAAGAVVAAVDSVLAGRHRNAFCAVRPPGHHAGPDGLLEAAASCGFCIFNNVAVGALHALEAHGLARVAIVDTDVHHGNGTEEIVRAYCQPSKLLFYSIHLFDKEGGDGKSDESESYSYQFFPGSGSVDDTALNIINAPVQPLWRSR-----------GGRSTKTRSXXXXXXXXXXXXGRGSWREAIMARLLPTLRAFNPQLILMSSGFDAVEGDVGNARH-ARGKCAGTDLTPADYAWITERIQEVADMCCDGRLVSVLEGGYGR 1383 ++ N +GD+ LHFAS W AV+ LL GA+ RN R PL+VA A ++ + R VR F+ EPR RTLV HHP+C EHQP++ DWECP R+ +I++ L F +EL+VTT+F +L RVHT Y+KFVD + + A +VPFTPMVQ+ L++K + VKP + CDTSFS AGSL AARRAAGAV AVD VLAG++RNAFCAVRPPGHHAG +GL+E + SCGFCIFNNVAVGA+HAL H L RVAIVD DVHHGNGTEEI RAY P++L F+S+HLFD+ Y+FFPGSG DD NIIN P+ PLW+S+ GGR + R AI RLLP LRAFNPQLI++S+GFDA +GDVGN + AR G DL+ DY W TE+IQ VAD+CC G++VSVLEGGYG+ Sbjct: 1619 INCKNEEGDSALHFASRWGGETAVRVLLAAGASADVRNSEGRNPLQVAGDGNASEGNPDMES-RYKVRREFFRQEPRNRTLVLHHPDCLEHQPKSDRDWECPERVVSIVDLLVKPRAFEHHELEVTTDFSAVNTESLMRVHTGPYIKFVDSMGKSFKGEDAGTSVPFTPMVQQHLLKKGQTDVKPKDTCDTSFSKGKYKAGSLKAARRAAGAVTHAVDRVLAGKNRNAFCAVRPPGHHAGANGLIENSVSCGFCIFNNVAVGAMHALGHHHLDRVAIVDIDVHHGNGTEEICRAYPDPNRLFFFSVHLFDR-----------GPMYEFFPGSGDQDDLQSNIINEPLDPLWKSKARHDDGYGAQGGGRQGRXRGGGARHPQPDVL--------AIQRRLLPALRAFNPQLIMLSAGFDAAKGDVGNCKQGARAAREGLDLSSEDYLWTTEKIQSVADICCGGKMVSVLEGGYGQ 2072
BLAST of jgi.p|Trimin1|170043 vs. uniprot
Match: A0A835YI51_9STRA (Histone deacetylase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YI51_9STRA) HSP 1 Score: 397 bits (1020), Expect = 6.240e-132 Identity = 206/276 (74.64%), Postives = 230/276 (83.33%), Query Frame = 1 Query: 571 EFCDTSFSAGSLGAARRAAGAVVAAVDSVLAGRHRNAFCAVRPPGHHAGPDGLLEAAASCGFCIFNNVAVGALHALEAHGLARVAIVDTDVHHGNGTEEIVRAYCQPSKLLFYSIHLFDKEGGDGKSDESESYSYQFFPGSGSVDDTALNIINAPVQPLWRSRGGRSTKTRSXXXXXXXXXXXXGRGSWREAIMARLLPTLRAFNPQLILMSSGFDAVEGDVGNARHARGKCAGTDLTPADYAWITERIQEVADMCCDGRLVSVLEGGYGRPHLDP 1398 +FCDTSFS+GSL AARRAAGAV AAVD+V++GR+RNAFCAVRPPGHHAGP+GLLEAA SCGFCIFNNVAVGALHALE HGL +VAIVDTDV + +EIVRAY QPSKLLFYS+HLFDKE +GK++E Y+FFPGSG+ DDTALNIIN PVQPLWR++GGR X GR ++REAI ARLLP LRAFNPQLILMSSGFDAVEGDVGNA+HAR AG DLTP+DYAWITER+QEVADMCC+GRLVSVLEGGYGRP L P Sbjct: 13 QFCDTSFSSGSLRAARRAAGAVTAAVDAVVSGRYRNAFCAVRPPGHHAGPNGLLEAAVSCGFCIFNNVAVGALHALETHGLEKVAIVDTDV---SAPQEIVRAYRQPSKLLFYSVHLFDKEH-EGKAEEGM---YEFFPGSGAGDDTALNIINVPVQPLWRAKGGRGGGG-XXRGGPPGVANGSGRAAFREAITARLLPALRAFNPQLILMSSGFDAVEGDVGNAKHARHSHAGCDLTPSDYAWITERVQEVADMCCEGRLVSVLEGGYGRPPLVP 280
BLAST of jgi.p|Trimin1|170043 vs. uniprot
Match: B7FXN5_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FXN5_PHATC) HSP 1 Score: 393 bits (1009), Expect = 2.090e-121 Identity = 238/500 (47.60%), Postives = 285/500 (57.00%), Query Frame = 1 Query: 130 NRRSRAPLEVAAAALAGSAP--------EEVHAAREAVRAAFYTSEPRLRTLVAHHPECQEHQPRNATDWECPARIDAIMERL------TGGALFRA---YELDVTTNFKRAPAAALRRVHTADYLKFVDGLSREL-------------------GAAGAPAAVPFTPMVQRDLMR--KAEVKPHEFCDTSFSAGSLGAARRAAGAVVAAVDSVLAGRHRNAFCAVRPPGHHAGPDGLLEAAASCGFCIFNNVAVGALHALEAHGL--ARVAIVDTDVHHGNGTEEIVRAYCQPSKLLFYSIHLFDKEGGDGKSDESESYSYQFFPGSGSVDDTALNIINAPVQPLWRSRGG------------RSTKTRSXXXXXXXXXXXX-----------------------------GRGSWREAIMARLLPTLRAFNPQLILMSSGFDAVEGDVGNARHARG-KCAGTDLTPADYAWITERIQEVADMCCDGRLVSVLEGGYGR 1383 RS A L VA + G P +E + R RAA + RTLV HHPEC EH P++ATDWE P RI +IM R+ TG +E+ V+ F+RA L RVH+ DYL FV+ LS++L G P VPFTP+VQR L++ ++ +K DTSFSAGSL AARRAAGAV AVD VL GR+RNAFC VRPPGHHAG +GLL+ SCGFCIFNNVA GAL+A+ L R AIVD DVHHGNGTE+IVR PSKLLF+SIHL+D D K S +SY+F+PG+GS DD ALNIIN P+ PLW+ R T+T GR ++R AI RLLP LRAFNP LIL+S+GFDA +GDVGNARH RG + G DL P DYAW T +I E+AD+CC GR+VSVLEGGYGR Sbjct: 623 EERSLAVLRVAEQSYRGIKPSKALKKRLKETASERRDARAALLIRSAQSRTLVLHHPECLEHHPKSATDWEAPDRIRSIMRRVLPASDPTGATETSGIFPHEVTVSKEFERAKLDLLSRVHSTDYLSFVNALSKDLEKQLRESGGSFSAMDESDNGFGSPPPVVPFTPLVQRSLIKVDESRIKLGVNSDTSFSAGSLRAARRAAGAVQHAVDCVLVGRNRNAFCVVRPPGHHAGINGLLDGGESCGFCIFNNVAAGALYAISEDRLLCGRCAIVDIDVHHGNGTEDIVRKCHDPSKLLFFSIHLYDN---DRKKRGSNQFSYKFYPGTGSEDDLALNIINVPIVPLWKEHSATVQPSIKTHNTRRKTRTSQEGPDEESDTTPKDSSRTSDVGXXXXXXXXSNSSPRPGGLSSGRTAYRNAIQNRLLPALRAFNPDLILISAGFDAAKGDVGNARHERGGEKVGLDLEPEDYAWTTRKILEIADICCQGRVVSVLEGGYGR 1119
BLAST of jgi.p|Trimin1|170043 vs. uniprot
Match: A0A1Z5JSY0_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JSY0_FISSO) HSP 1 Score: 391 bits (1005), Expect = 8.860e-121 Identity = 227/459 (49.46%), Postives = 278/459 (60.57%), Query Frame = 1 Query: 205 AREAVRAAFYTSEPRLRTLVAHHPECQEHQPRNATDWECPARIDAIMERL------TGGALFRA---YELDVTTNFKRAPAAALRRVHTADYLKFVDGLSRELGAAGA----------------PAAVPFTPMVQRDLMR--KAEVKPHEFCDTSFSAGSLGAARRAAGAVVAAVDSVLAGRHRNAFCAVRPPGHHAGPDGLLEAAASCGFCIFNNVAVGALHALEAHGLA--RVAIVDTDVHHGNGTEEIVRAYCQPSKLLFYSIHLFDKEGGDGKSDESESYSYQFFPGSGSVDDTALNIINAPVQPLWRSRGGRST---------KTRSXXXXXXXXXXXXGRGS---------------------------WREAIMARLLPTLRAFNPQLILMSSGFDAVEGDVGNARHARG-KCAGTDLTPADYAWITERIQEVADMCCDGRLVSVLEGGYGR 1383 AR RA P+ R+LV HHPEC EH P+++TDWE P RI AI+ R+ TG A +E+ V+ F RA + L RVH+ +YL FV+ LS +L P VPFTP+VQR +++ ++ VK DTSFS+GSL AARRAAG+V AVD VL GR+RNAFC VRPPGHHAG +GLLE SCGFCIFNNVA GAL+A+ L R AIVD DVHHGNGTEEIVR PSKL F+SIHL+D + GK + Y+F+PG+GS DD ALNIIN P+ PLW+ + +++ K +S GRGS +REAI+ RLLP+LRAFNP LI++S+GFDA +GDVGNARH RG + G DL P DYAW T +I EVADMCC GR+VSVLEGGYGR Sbjct: 668 ARRESRANLLIRSPQSRSLVLHHPECLEHHPKSSTDWEAPDRITAIIRRVIPSFDSTGAAESSGIFPHEVVVSQEFDRATLSMLSRVHSTEYLSFVNNLSNDLKNQAREPLKNGEKNIEEDDCKPPVVPFTPLVQRTMIKVDESSVKLSANSDTSFSSGSLKAARRAAGSVQHAVDCVLVGRNRNAFCVVRPPGHHAGINGLLEGGESCGFCIFNNVAAGALYAISDDRLLCERCAIVDIDVHHGNGTEEIVRRCNDPSKLFFFSIHLYDNDKRKGKG----QFQYKFYPGTGSDDDLALNIINVPIVPLWKDQSSQASPVKTHNTRKKAKSTQDVVDDSSTGTGRGSDGASEGGSGSTSIGSPRHASGKSGRTAYREAILTRLLPSLRAFNPDLIIISAGFDACKGDVGNARHERGGEKMGLDLEPEDYAWTTRKILEVADMCCHGRVVSVLEGGYGR 1122
BLAST of jgi.p|Trimin1|170043 vs. uniprot
Match: B8C5L2_THAPS (Histone deacetylase n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C5L2_THAPS) HSP 1 Score: 375 bits (964), Expect = 1.530e-117 Identity = 232/488 (47.54%), Postives = 282/488 (57.79%), Query Frame = 1 Query: 85 AVQALLECGAAYGARNRRSRAPLEVAAAALAGSAPEEVHAA--------REAVRAAFYTSEPRLRTLVAHHPECQEHQPRNATDWECPARIDAIMERLTGGAL----------FRAYELDVTTNFKRAPAAALRRVHTADYLKFVDGLSREL---------------------GAAGAPAAVPFTPMVQRDLMRKAEV-KPHEFCDTSFSAGSLGAARRAAGAVVAAVDSVLAGRHRNAFCAVRPPGHHAGPDGLLEAAASCGFCIFNNVAVGALHAL--EAHG--LARVAIVDTDVHHGNGTEEIVRAYCQPSKLLFYSIHLFDKEGGDGKSDESESYSYQFFPGSGSVDDTALNIINAP-VQPLWRSRGGRSTKTRSXXXXXXXXXXXXGRGSWREAIMARLLPTLRAFNPQLILMSSGFDAVEGDVGNARHARG--KCAGTDLTPADYAWITERIQEVADMCCDGRLVSVLEGGYGR--PHLDPP 1401 AVQ L+E GA NR R PL+VAA AG E A R ++R + RTLV HH EC +H ++ DWE P RID+IM L+ F E+ V+ +F+RA L R+H+A+YL FV+ LS+EL G VPFTPMVQR +M+ A V K DTSFSAGSL AARRAAGAV AVD VL GR+RNAFC VRPPGHHAG +GLL A SCGFC+FNNVA GA+HAL E H R AIVD D HHGNGTEEIVR +LLF+S+HL+D + K + ++Y+F+PG+G+ DD A N+IN P P + T GR ++R AI RLLP LRAFNP LI+MS+GFDA GDVGNARH G + G DL P DYAW ++ EVAD+CC+GR+VSVLEGGYGR P + PP Sbjct: 333 AVQVLVESGARTNIFNRNFRRPLDVAAEGFAGLEEEGSEAGKVVVDESERRSIRWNLLNFSSQCRTLVLHHQECLDHMTKSQHDWEVPDRIDSIMSSLSNRTSEQCLPSDNQNFNPCEVTVSNDFERATLELLSRIHSAEYLAFVNDLSKELERKRKQQLVEDTQAESSADADGVDKPMPVVPFTPMVQRKVMKGAVVAKEPGHSDTSFSAGSLKAARRAAGAVQHAVDCVLVGRNRNAFCVVRPPGHHAGINGLLSNAESCGFCLFNNVAAGAMHALSDEKHRPRCERCAIVDIDAHHGNGTEEIVRKCHDSGRLLFFSVHLYDHD----KPKKGNEFNYKFYPGTGAEDDVAHNVINLPSTSPHYPPHYLMGT----------------GRLAYRRAIQHRLLPALRAFNPDLIIMSTGFDAARGDVGNARHFVGGTEAMGFDLEPEDYAWTARKVCEVADICCNGRVVSVLEGGYGRTAPPIPPP 800
BLAST of jgi.p|Trimin1|170043 vs. uniprot
Match: A0A6S8HTR1_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A6S8HTR1_9STRA) HSP 1 Score: 381 bits (978), Expect = 4.910e-117 Identity = 236/537 (43.95%), Postives = 296/537 (55.12%), Query Frame = 1 Query: 82 QAVQALLECGAAYGARNRRSRAPLEVAAAALAG-------------------------SAPEEVHAAREAVRAAFYTSEPRLRTLVAHHPECQEHQPRNATDWECPARIDAIMERLTGGA-------LFRAYELDVTTNFKRAPAAALRRVHTADYLKFVDGLSREL---------GAAGAPA-AVPFTPMVQRDLMRKAE--VKPHEFCDTSFSAGSLGAARRAAGAVVAAVDSVLAGRHRNAFCAVRPPGHHAGPDGLLEAAASCGFCIFNNVAVGALHAL--EAHGLARVAIVDTDVHHGNGTEEIVRAYCQPSKLLFYSIHLFDKEGGDGKSDESESYSYQFFPGSGSVDDTALNIINAPVQPLWRSRGGRST------KTR--------------------------------------SXXXXXXXXXXXXGRGSWREAIMARLLPTLRAFNPQLILMSSGFDAVEGDVGNARHARG--KCAGTDLTPADYAWITERIQEVADMCCDGRLVSVLEGGYGR---PHLDPPDD 1407 +AV LL+ GA A N + R P+++AA SA + +A R RTLV HHPEC EH P++++DWE P R+ I+E L A+E+ ++T F+RA L+RVH A+YL FV LS++L + PA VPFTPMVQR +++ E VK DT+FSAGSL AARRAAGAV AVD VL GR+RNAFC VRPPGHHAG +GLL+ SCGFCIFNNVA GAL+A+ E R AIVD DVHHGNGTEEI+R + PS+L F+SIHL+D D + + Y+F+PG+GS DD ALNI+N P+QPLWR + +T TR GR ++R+AI RLLP LRAFNP LIL+S+GFDA GDVGNARH RG + G DL DYAW T +I E+AD+CC GR+VSVLEGGYGR P +D P++ Sbjct: 570 EAVALLLDSGARANALNNKCRRPVDLAADGFMDEEHSIAFLRARDARDHHKKFSKELKSALKHKNAEMRECRKNLLERSVHSRTLVLHHPECLEHVPKSSSDWEAPDRVITILEHLASSMEEGCARPAVHAHEVTLSTEFERAKLDLLKRVHGAEYLSFVHDLSKDLERKIKGSHDDESDKPAPVVPFTPMVQRTMIKINEEHVKLGVNSDTAFSAGSLRAARRAAGAVQHAVDCVLVGRNRNAFCVVRPPGHHAGVNGLLDGGESCGFCIFNNVAAGALYAITNERDLCGRCAIVDIDVHHGNGTEEIIRKFSDPSRLFFFSIHLYDN---DNRKRAPNQFQYKFYPGTGSEDDLALNILNVPIQPLWRDQNPPATPALRTHNTRHKAKGAPKSTSDTQDDSSVGTPRGSAKNSDVEAGSMSAGSTTPQPGSGGSSGRVAYRQAIQNRLLPALRAFNPDLILISAGFDAARGDVGNARHERGGRERMGLDLESEDYAWTTRKILEIADICCHGRVVSVLEGGYGRSAPPSVDTPNE 1103
BLAST of jgi.p|Trimin1|170043 vs. uniprot
Match: A0A7S3Q3P5_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q3P5_9STRA) HSP 1 Score: 374 bits (960), Expect = 1.050e-114 Identity = 217/461 (47.07%), Postives = 266/461 (57.70%), Query Frame = 1 Query: 220 RAAFYTSEPRLRTLVAHHPECQEHQPRNATDWECPARIDAIMERLTGG--ALFRAYELDVTTNFKRAPAAALRRVHTADYLKFVDGLSRELGA-------AGAPAAVPFTPMVQRDLMRKAEVKPHEFCDTSFSAGSLGAARRAAGAVVAAVDSVLAGRHRNAFCAVRPPGHHAGPDGLLEAAASCGFCIFNNVAVGALHALEAHG----LARVAIVDTDVHHGNGTEEIVRAYCQPSKLLFYSIHLFDKEGGDGKSDESESYSYQFFPGSGSVDDTALNIINAPVQPLWRSR----------GGRSTKTR-------------------------------------------------SXXXXXXXXXXXXGRGSWREAIMARLLPTLRAFNPQLILMSSGFDAVEGDVGNARHAR-GKCA-GTDLTPADYAWITERIQEVADMCCDGRLVSVLEGGYG 1380 RA F++ P+ RTLV HH EC +H P++ TDWE P RI +I+ L+ R E+ V+ F RA L RVH+A+YL FV+ LS+EL A P+ VPFTPMVQR +MR+ VK DTSFSAGSL AARRAAGA+ AVD VL GR+RNAFC VRPPGHHAG +GLL+ SCGFCIFNNVA GA+HAL R AIVD DVHHGNGTEEIV+ P +L F+S+HL+D D K ++S + +F+PG+G DD A N+IN P+ P+W+ R +T+ + GR ++R+AI RLLP LRAFNP LIL+S G DA GDVGNARH R GK A G DLTP DYAW T +I EVAD+CC GR+VS+LEGGYG Sbjct: 598 RANFFSHSPQSRTLVLHHSECLDHLPKSETDWEAPDRISSIINALSRNDEISIRENEIQVSQEFDRASLEFLSRVHSAEYLTFVNNLSKELEKRHNEETEASVPSVVPFTPMVQRTVMREPTVKKGSHSDTSFSAGSLRAARRAAGAIKHAVDCVLVGRNRNAFCIVRPPGHHAGINGLLDGGESCGFCIFNNVAAGAMHALSDENPRPNCERCAIVDIDVHHGNGTEEIVKKCDNPGRLFFFSVHLYDN---DKKKEKSNGF--KFYPGTGDEDDVAHNVINVPIAPMWKERKTNHSPSMAENRHNTRNKLKQKVDAVNKSPSMENTIEMGENSGSPEENFDAEKKNDAHVTQQQHQNDGQRQAPHSFLYGTGREAYRQAIQQRLLPALRAFNPDLILISLGLDASGGDVGNARHYRNGKEAQGIDLTPDDYAWSTRKIMEVADICCQGRVVSILEGGYG 1053
BLAST of jgi.p|Trimin1|170043 vs. uniprot
Match: A0A7S4AC53_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AC53_9STRA) HSP 1 Score: 374 bits (961), Expect = 5.890e-114 Identity = 219/459 (47.71%), Postives = 271/459 (59.04%), Query Frame = 1 Query: 208 REAVRAAFYTSEPRLRTLVAHHPECQEHQPRNATDWECPARIDAIMERLTGGAL------FRAYELDVTTNFKRAPAAALRRVHTADYLKFVDGLSREL----------------GAAGAPAAVPFTPMVQRDLMRKAE--VKPHEFCDTSFSAGSLGAARRAAGAVVAAVDSVLAGRHRNAFCAVRPPGHHAGPDGLLEAAASCGFCIFNNVAVGALHALEAHGLA--RVAIVDTDVHHGNGTEEIVRAYCQPSKLLFYSIHLFDKEGGDGKSDESESYSYQFFPGSGSVDDTALNIINAPVQPLWRSR-----GG-----RSTKTR-----------------------------SXXXXXXXXXXXXGRGSWREAIMARLLPTLRAFNPQLILMSSGFDAVEGDVGNARHARG--KCAGTDLTPADYAWITERIQEVADMCCDGRLVSVLEGGYGR 1383 R RA + + RTLV +HPEC EH P+ DWE P RI++IMER+ G + E+ ++ F+RA L RVH+ +YL FV+ LS++L +G VPFTPMVQR + + E VK E DTSFS GSL AARRAAGAV AVD VL GRHRNAFC VRPPGHHAG +GLL+ SCGFCIFN+VA GA+HA+ L R AIVD D HHGNGTEEIVR P KL F+SIHL+D + GK E++S+ Y+F+PG+G DD LNIIN P+ PLW+ GG R T+ R S GR ++R++I +RLLP LRAFNP LIL+S+GFDA +GDVGNA+H G + G DL P DYAW T ++ E+AD+CC GR+VSVLEGGYGR Sbjct: 727 RREARANLFECSSQSRTLVLYHPECLEHIPKAEGDWENPDRINSIMERIKGIRIGSDIPSIYQREIQISKEFERANLDLLSRVHSTEYLNFVNELSKDLERQQKEQNANSGRNKDDTSGPAPVVPFTPMVQRSVTKVEESSVKISEHSDTSFSVGSLRAARRAAGAVQHAVDCVLVGRHRNAFCVVRPPGHHAGINGLLDGGESCGFCIFNSVAAGAMHAISDKRLMCERCAIVDFDAHHGNGTEEIVRKCHDPGKLFFFSIHLYDNDR-KGKR-ETKSFQYKFYPGTGDEDDLPLNIINVPITPLWKDSNQIPVGGTHNTRRQTRKRASQSDDGSSSETGTSRLSDAEVDPKLPRASSPTTSGSSGAGGGRQAYRKSIQSRLLPALRAFNPDLILISAGFDACKGDVGNAKHEIGGKEKMGIDLEPEDYAWTTSKVLEIADICCQGRVVSVLEGGYGR 1183 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|170043 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_8540 ID=mRNA_8540|Name=jgi.p|Trimin1|170043|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1578bp|location=Sequence derived from alignment at Contig_68:661473..667340- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGCAGCACGGGGCAGCGCTGAGCGCGCCCAACAATGATGGGGACACGCCback to top protein sequence of jgi.p|Trimin1|170043 >Trimin1|170043|e_gw1.68.132.1 ID=Trimin1|170043|e_gw1.68.132.1|Name=jgi.p|Trimin1|170043|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=526bp MQHGAALSAPNNDGDTPLHFASMWARPQAVQALLECGAAYGARNRRSRAPback to top mRNA from alignment at Contig_68:661473..667340- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_8540 ID=mRNA_8540|Name=jgi.p|Trimin1|170043|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=5868bp|location=Sequence derived from alignment at Contig_68:661473..667340- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_68:661473..667340- >mRNA_8540 ID=mRNA_8540|Name=jgi.p|Trimin1|170043|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1578bp|location=Sequence derived from alignment at Contig_68:661473..667340- (Tribonema minus UTEX_B_3156 )back to top |