mRNA_8496 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|350650
Unique NamemRNA_8496
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|350650 vs. uniprot
Match: A0A836CAX9_9STRA (AAA domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAX9_9STRA)

HSP 1 Score: 1677 bits (4343), Expect = 0.000e+0
Identity = 1206/1206 (100.00%), Postives = 1206/1206 (100.00%), Query Frame = 1
Query:    1 MNDFEEPYDFPEEEQEEPDWLGYDEEAQAAMHEXXXXXXXXXXXXXXXXXXTLSFVSASQQQHTKTGRADSPRRAAAMPPLKLYDRASDDENAQAPPQRRRPLAPSAAGVNGTXXXXXXXXXXXXSGAALKSAFATTKLDMDAPAALGGWRAKRARTGDARHAQHHPQQSASLALLHARRLLRAPADGGAGAGTQESELVTQAPLFRAARDRSAVLARPPLATGGGGDGVXXXXXXXXXXXXASAAAGDDFVEVLTGSGAKAFLRALRPAESAAVLAACQRAQRSGGGGSGLLECPMETLMARAERRQVERLHRKTMVAADAAAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQARLWVDKYAPTNFAQLLSDERTNREVLRAIKAWDAFVFPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFRXXXXXXXXXQXXXXXXXXXXXXXXXXXXKPKGAGGAEGGRVDRRPESKILLLCGPPGMGKTTLAHIVAQQAGYRPLEINASDDRTASVLTDKAXXXXXXXXXXXXXXXXXXVVRAMENRALFGDQRPNLIILDEIDGAEDKAAIDAILAMAHAPLPPLRGAAGAXXXXXXXXXXXXXXXXXXXXXXXXTHPLTRPLILICNNQYAPHLRALRPEAAVFSFRRASPQRLARRLRVICAAEAITASQPSLLALCESTGNDVRACLNTLQFVAHRTRQAQRPLQASGGGRVHDVSMALVAALTTGMKDERRDIFQVWNAVFTAPKSGAGGXXXXXXXXXXXXXXXXXXXDAPGRTAGRGGAAALDLKDDDAPSGAAAVQRQLEQFNDHRRVLDGVHECYLQAKYSDPSLRRSVAAADWLAYADTLEACVVGGSEHYALRRYLPAAAAGVHVQVRCDARPPAPRLASALAATAAAREARSAALRAFDAGRHPASSGRGGGAAATEVAPLCARAMLLAPRLRCVPLELLRGAERQRLADLVSALIACGATGTVAGRSGGGXGGDADEWVLEPPIDALTVFEGQPLSYAPLAGPMRQLVAHEVEMERVRRQSASRGNADGAAAAXXXXXXXXXXXXXXAAAEARHASFKRAPPAPVHETAEQEQKRQRMDAARAAVVPFWHKAGARGTRGGAQXXXXXGKGEXXXXXXXXXXXXXXXAPLRFKYQAGYTNAVRRPVRMKDLL 3618
            MNDFEEPYDFPEEEQEEPDWLGYDEEAQAAMHEXXXXXXXXXXXXXXXXXXTLSFVSASQQQHTKTGRADSPRRAAAMPPLKLYDRASDDENAQAPPQRRRPLAPSAAGVNGTXXXXXXXXXXXXSGAALKSAFATTKLDMDAPAALGGWRAKRARTGDARHAQHHPQQSASLALLHARRLLRAPADGGAGAGTQESELVTQAPLFRAARDRSAVLARPPLATGGGGDGVXXXXXXXXXXXXASAAAGDDFVEVLTGSGAKAFLRALRPAESAAVLAACQRAQRSGGGGSGLLECPMETLMARAERRQVERLHRKTMVAADAAAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQARLWVDKYAPTNFAQLLSDERTNREVLRAIKAWDAFVFPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFRXXXXXXXXXQXXXXXXXXXXXXXXXXXXKPKGAGGAEGGRVDRRPESKILLLCGPPGMGKTTLAHIVAQQAGYRPLEINASDDRTASVLTDKAXXXXXXXXXXXXXXXXXXVVRAMENRALFGDQRPNLIILDEIDGAEDKAAIDAILAMAHAPLPPLRGAAGAXXXXXXXXXXXXXXXXXXXXXXXXTHPLTRPLILICNNQYAPHLRALRPEAAVFSFRRASPQRLARRLRVICAAEAITASQPSLLALCESTGNDVRACLNTLQFVAHRTRQAQRPLQASGGGRVHDVSMALVAALTTGMKDERRDIFQVWNAVFTAPKSGAGGXXXXXXXXXXXXXXXXXXXDAPGRTAGRGGAAALDLKDDDAPSGAAAVQRQLEQFNDHRRVLDGVHECYLQAKYSDPSLRRSVAAADWLAYADTLEACVVGGSEHYALRRYLPAAAAGVHVQVRCDARPPAPRLASALAATAAAREARSAALRAFDAGRHPASSGRGGGAAATEVAPLCARAMLLAPRLRCVPLELLRGAERQRLADLVSALIACGATGTVAGRSGGGXGGDADEWVLEPPIDALTVFEGQPLSYAPLAGPMRQLVAHEVEMERVRRQSASRGNADGAAAAXXXXXXXXXXXXXXAAAEARHASFKRAPPAPVHETAEQEQKRQRMDAARAAVVPFWHKAGARGTRGGAQXXXXXGKGEXXXXXXXXXXXXXXXAPLRFKYQAGYTNAVRRPVRMKDLL
Sbjct:    1 MNDFEEPYDFPEEEQEEPDWLGYDEEAQAAMHEXXXXXXXXXXXXXXXXXXTLSFVSASQQQHTKTGRADSPRRAAAMPPLKLYDRASDDENAQAPPQRRRPLAPSAAGVNGTXXXXXXXXXXXXSGAALKSAFATTKLDMDAPAALGGWRAKRARTGDARHAQHHPQQSASLALLHARRLLRAPADGGAGAGTQESELVTQAPLFRAARDRSAVLARPPLATGGGGDGVXXXXXXXXXXXXASAAAGDDFVEVLTGSGAKAFLRALRPAESAAVLAACQRAQRSGGGGSGLLECPMETLMARAERRQVERLHRKTMVAADAAAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQARLWVDKYAPTNFAQLLSDERTNREVLRAIKAWDAFVFPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFRXXXXXXXXXQXXXXXXXXXXXXXXXXXXKPKGAGGAEGGRVDRRPESKILLLCGPPGMGKTTLAHIVAQQAGYRPLEINASDDRTASVLTDKAXXXXXXXXXXXXXXXXXXVVRAMENRALFGDQRPNLIILDEIDGAEDKAAIDAILAMAHAPLPPLRGAAGAXXXXXXXXXXXXXXXXXXXXXXXXTHPLTRPLILICNNQYAPHLRALRPEAAVFSFRRASPQRLARRLRVICAAEAITASQPSLLALCESTGNDVRACLNTLQFVAHRTRQAQRPLQASGGGRVHDVSMALVAALTTGMKDERRDIFQVWNAVFTAPKSGAGGXXXXXXXXXXXXXXXXXXXDAPGRTAGRGGAAALDLKDDDAPSGAAAVQRQLEQFNDHRRVLDGVHECYLQAKYSDPSLRRSVAAADWLAYADTLEACVVGGSEHYALRRYLPAAAAGVHVQVRCDARPPAPRLASALAATAAAREARSAALRAFDAGRHPASSGRGGGAAATEVAPLCARAMLLAPRLRCVPLELLRGAERQRLADLVSALIACGATGTVAGRSGGGXGGDADEWVLEPPIDALTVFEGQPLSYAPLAGPMRQLVAHEVEMERVRRQSASRGNADGAAAAXXXXXXXXXXXXXXAAAEARHASFKRAPPAPVHETAEQEQKRQRMDAARAAVVPFWHKAGARGTRGGAQXXXXXGKGEXXXXXXXXXXXXXXXAPLRFKYQAGYTNAVRRPVRMKDLL 1206          
BLAST of jgi.p|Trimin1|350650 vs. uniprot
Match: A0A6H5K262_9PHAE (AAA domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K262_9PHAE)

HSP 1 Score: 319 bits (817), Expect = 8.190e-88
Identity = 251/717 (35.01%), Postives = 337/717 (47.00%), Query Frame = 1
Query: 1144 AQARLWVDKYAPTNFAQLLSDERTNREVLRAIKAWDAFVFPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFRXXXXXXXXXQXXXXXXXXXXXXXXXXXXKPKGAGG-------AEGGRVDRRPESKILLLCGPPGMGKTTLAHIVAQQAGYRPLEINASDDRTASVLTDKAXXXXXXXXXXXXXXXXXXVVRAMENRALFGDQRPNLIILDEIDGAEDKAAIDAILAMAHAPLPPLRGAAGAXXXXXXXXXXXXXXXXXXXXXXXXTHPLTRPLILICNNQYAPHLRALRPEAAVFSFR-RASPQRLARRLRVICAAEAITASQPSLLALCESTGNDVRACLNTLQFVAHRTRQAQRPLQASGGGRVHDVSMALVAALTTGMKDERRDIFQ--VWNAVFTAPKSGAGGXXXXXXXXXXXXXXXXXXXDAPGRTAGRGGAAALDLKDDDAPSGAAAVQRQLEQFNDHRRVLDGVHECYLQAKYSDPSLRRSVAAADWLAYADTLEACVVGGSEHYALRRYLPAAAAGVHVQVRCDARPPAPRLASALAATAAAREARSAALRAFDAGRHPASSGRGGGAAATEVAPLCARAMLLAPRLRCVPLELLRGAERQRLADLVSALIACGATGTVAGRSGG---------GXGGDADEWVLEPPIDALTVFEGQPLSYAPLAGPMRQLVAHEVEMERVRRQSASR 3237
            A   LWVDKYAP  F  LLSDE+ NREVLRA+KAWD FVF                                                                             K KG GG       ++G   D+RPE++I++LCGPPG+GKTTLA +VA+ AGYR  EINASDDRTASVL  +                   V  AME   L  D+RPNLI+LDE+DGA+ KAA   ++ +A APL     AAG                            LTRPL+LICN+Q+ P LR +R  A VF FR ++SP RL +RL+ IC +E +T +  +L  L + +  DVR+CL+TLQFVA R          +  G V + S AL+ A+  G+KDERRD+F+  +W                                       G  G+ A D KD D       V  +++ FNDH +VL GVHE +L  +++DP+L ++ AA DWL  AD ++      ++ Y+  RY P AAAGVH   R D R    +      A  A R A+S  L +F  GR   ++GR   A   ++  L     +LAP LR +  +LL   ER R  +LV  L++CG T +    S           G    A E+ LEP ID L  +EG   ++  LA P+R +VAHEV +E +R+  A++
Sbjct:  282 ADGALWVDKYAPDGFRDLLSDEKINREVLRAVKAWDPFVFKKEPARAGAVTAE----------------------------------------------------------------KKKGVGGMKPLSMASKGDATDKRPEARIIMLCGPPGLGKTTLAQVVAKHAGYRVYEINASDDRTASVLRQR-------------------VTEAMEGNTLLADKRPNLIVLDEVDGADGKAAAQVLVDIATAPLAKATAAAGGGKKGKRRTS------------------LTRPLVLICNDQWTPALRPIRAIAQVFVFRAKSSPARLVQRLKAICTSERLTVNTDALTRLADRSHLDVRSCLHTLQFVARR----------ASSGSVTNASAALLTAVAEGIKDERRDLFEGVLW-------------------------------------VLGVRGSMA-DRKDAD-------VFEEVQAFNDHSKVLAGVHENFLGVRFNDPTLSKAAAAMDWLEMADLMDTRT-NQTQDYSFSRYAPVAAAGVHFLCRSDQRSTVTQPKKDYEARTA-RAAKSNILHSFADGRQLGATGRTTQALVLDM--LSHLMDILAPTLRPLNPDLLSPQERARFRELVGILLSCGLTFSPQSASSSSSASAPPAFGAATGAQEFALEPAIDQLLKYEGYEFAHPRLAPPLRPMVAHEVALEGMRKAEAAK 838          
BLAST of jgi.p|Trimin1|350650 vs. uniprot
Match: A0A4D9CU49_9STRA (AAA domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CU49_9STRA)

HSP 1 Score: 249 bits (635), Expect = 4.840e-64
Identity = 263/872 (30.16%), Postives = 367/872 (42.09%), Query Frame = 1
Query: 1144 AQARLWVDKYAPTNFAQLLSDERTNREVLRAIKAWDAFVFPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFRXXXXXXXXXQXXXXXXXXXXXXXXXXXXKPK-GAGGAEGGRVDRRPE--SKILLLCGPPGMGKTTLAHIVAQQAGYRPLEINASDDRTASVLTDKAXXXXXXXXXXXXXXXXXXVVRAMENRALFGDQRPNLIILDEIDGAEDKAAIDAILAMAHAPLP-PLRGAAGAXXXXXXXXXXXXXXXXXXXXXXXXTHPLTRPLILICNNQYAPHLRALRPEAAVFSFRRASPQRLARRLRVICAAEAITASQPSLLALCESTGNDVRACLNTLQFVAHRTR-------QAQRPLQASGGGRVHDVSMALVAALTTGMKDERRDIFQVWNAVFTAPKSGAGGXXXXXXXXXXXXXXXXXXXDAPGRTAGRGGAAALDLKDDDAPSGAAAVQRQLEQFNDHRRVLDGVHECYLQAKYSDPSLRRSVAAADWLAYADTLEACVVGGSEHYALRRYLPAAAAGVHVQVRCDARPPAPRLASALA--ATAAAREARSAALRAFDAG--------RHPASSGRGGGAAATEVAPLCARAMLLAPRLRCVPLELLRGAERQRLADLVSALIACGATGTVAGRSGGGX----GGDADEWVLEPPIDALTVF------EGQPLSYA-PLAGP---------MRQLVAHEVEMERVRRQSASRGNADGAAAAXXXXXXXXXXXXXXAAAEARHASFKRAPPAP---VHETAEQEQKRQRMDAARAAVVPFWHKAGARGTRGGAQXXXXXGKGEXXXXXXXXXXXXXXXAP---LRFKYQAGYTNAVRRPVRMKDLL 3618
            A  +LWV +Y+P+ FA LLS+E TNREVLR ++ WDAFVF  A                                                       Q                   P  G       R DRRPE  ++ +LL GPPG+GKTTLAH++A+  GYRPLEINASDDR+A  L +K                   + RAMEN+A+ GD+RPN IILDE+DG E KAA+  I+ M  APL    +G+AG+                          PLTRPLI ICN+ Y P LRALR  A VF FRR +  RL +RL+ IC AE +     +L  LCE++G+DVR+CLNTLQF   R         Q Q+            +S  L+  +  G+KD+ +D+ QV  ++F  P S A                       P    G  GA   + +          V   +  ++DH  VL    E Y Q +++DP+L + + AA+WLA++D ++   + G  H+ +     A AA +H+  R + RP   RLA         +AR +R   L++F  G        R P             V+PL     +L P LR V  +L   AE+  L  LV  L+ACG +   +  SG        G  +   + P +  L  F       G P S   P+  P         ++ L   E ++E +RR    + +A     A                  ++ A+ + A P P   +    E+E+   +    +        K  +R    G+       +G                A    +RFKY AGYTNAVRRPV MKD+L
Sbjct:  345 ASEQLWVSRYSPSAFAHLLSEEATNREVLRLLRQWDAFVFKRAVPKRLAEASGPGRKMWGGQGGGSS-------------------------------QAGHDGAGQEGPGRWTGKSDPDLGDTDLSLQRRDRRPEPSARAILLAGPPGIGKTTLAHVIAEHCGYRPLEINASDDRSAGALREK-------------------MTRAMENQAVLGDKRPNCIILDEVDGIEGKAAMKMIVNMIKAPLKGKQKGSAGSKDEAGGHSGADGSVSCP---------PLTRPLICICNDLYVPALRALREVATVFRFRRRTNPRLLQRLKTICQAENLPVEGVALSVLCEASGHDVRSCLNTLQFFQARLPAAVLSQGQGQKEQDKPPAAFASHLSRQLLEYVGEGLKDQEKDMLQVCQSLFRKPASKATA--------------------TPALLPGEEGAG-TEKRAQSRGRDTDRVMASVASYSDHAHVLLAAQENYCQLRFTDPNLTKVLHAAEWLAFSDLVQGRQMEG--HHVMEDLHLATAAALHLLCRVETRP---RLALPRKDHEYRSARLSRQHILQSFGEGCSLQAMWARRPTP------VVLDVVSPLM---HILNPNLRPVNPDLYSFAEKAGLRHLVDVLLACGISYVQSPGSGLSHPHQHSGAPERLEMLPALVHLAEFGLANDGTGAPRSETLPVQRPRPPRLLPAFVKLLATQEAKLEALRRTELRKTDA---LKAKKGMSSSTGQGPRLNGLPSKAAASREATPGPNIALLVAKEEEEPGPKAWYVKLGTKRSTTKTKSRTQTDGSHVGDTGTQGLNLGEGLFPPEHKQSAAKKSTVRFKYVAGYTNAVRRPVYMKDML 1119          
BLAST of jgi.p|Trimin1|350650 vs. uniprot
Match: A0A1Y1I8B2_KLENI (DNA replication checkpoint protein CHL12/CTF18 n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1I8B2_KLENI)

HSP 1 Score: 231 bits (588), Expect = 1.970e-58
Identity = 257/866 (29.68%), Postives = 369/866 (42.61%), Query Frame = 1
Query: 1156 LWVDKYAPTNFAQLLSDERTNREVLRAIKAWDAFVF------PAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFRXXXXXXXXXQXXXXXXXXXXXXXXXXXX----------------KPKGAGGAEGGRVDRRPESKILLLCGPPGMGKTTLAHIVAQQAGYRPLEINASDDRTASVLTDKAXXXXXXXXXXXXXXXXXXVVRAMENRALFGDQRPNLIILDEIDGA----EDKAAIDAILAMAHAPLPPLRGAAGAXXXXXXXXXXXXXXXXXXXXXXXX--THPLTRPLILICNNQYAPHLRALRPEAAVFSFRRASPQRLARRLRVICAAEAITASQPSLLALCESTGNDVRACLNTLQFVAHRTRQAQRPLQASGGGRVHDVSMALVAALTTGMKDERRDIFQVWNAVFTAPKSGAGGXXXXXXXXXXXXXXXXXXXDAPGRTAGRGGAAALDLKDDDAPSGAA-AVQRQLEQFNDHRRVLDGVHECYLQAKYSDPSLRRSVAAADWLAYADTLEACVVGGSEHYALRRYLPAAAAGVHVQVRCDARPPA--PRLASALAATAAAREARSAALRAFDAGRHPA-SSGRGGGAAATE-VAPLCARAMLLAPRLRCVPLELLRGAERQRLADLVSALIACGATGTVAGRSGGGXGGDADEWVLEPPIDALTVFEGQPLSYAPLAGPMRQLVAHEVEMERVRRQSASR------------GNADGAAAAXXXXXXXXXXXXXXAAAEARHASFKRAPPAPVHETAEQEQKRQRMDAARAAVVPFWHKAGARGTRGGAQXXXXXGKGEXXXXXXXXXXXXXXXAPLRFKYQAGYTNAVRRPVRMKDLL 3618
            LWVDKYAP  F +LLSDE+TNREVLR IK WD  VF      P +                                            F+         Q     XXXXXXXXXXXXX                KP           D RPE K+LLLCG PG+GKTTLAH+ A   GYR +E+NASDDR+A+ L  +                   ++ A++ + + GD+RPN +++DEIDGA    E K AIDA+LA+ +A      GA+G+                             L+RP+I ICN+ YAP LR LR  A VF F   +P RLA RL+ IC  E  +A   +L ALCE T  DVRACLNTLQF+ HR  +A R              +A +++   G KD   ++F++W  +F   KS AG                         TA  G  A       +A       +Q  L  + +H  V++GVHE +L+ +Y + +L+++V   +W+  ++ +   V    +H+ L  Y PA    V   +    RP    P+  +   A  +++      L+++     P  + G    A   + V+PL    ++  P LR V  +LL   E+  +++LV  +I  G T  +    G   G       L+P +  L  FEG+P  +  L   +R+++AHEV ++ +R++ A+R            G+  G+ A                 A        RA   P      + +K+    AA+  V  F         R G          E                P+ +K+  G+TNAVRRPV +KDLL
Sbjct:  260 LWVDKYAPRAFTELLSDEQTNREVLRWIKEWDPCVFHRPSRPPTSFVAHAPVASYRGGFTARGGRNSTGLQPGGRGGDRPDWKHLKEAKFQGRGRGFGEQQNGGRGXXXXXXXXXXXXXXXXXXXXDALQAPVFKKPS----------DGRPEQKVLLLCGAPGLGKTTLAHVAAHHCGYRVVEVNASDDRSANSLKQR-------------------ILDAVQMQPVMGDRRPNCLVIDEIDGALNGAEGKGAIDALLAIVNA------GASGSRDSDKDADEAGGNHLAPSKKKKKKGAVKKLSRPVICICNDMYAPALRQLRQVAKVFVFAPPAPSRLATRLKFICTKEGYSADTRALTALCEHTECDVRACLNTLQFL-HRRGKALR--------------LADISSQVVGRKDMTHNVFEIWTELFQRKKSKAGTG-----------------------TALSGSPAMQGTMTRNAEQQEFHRIQNLLSGYGEHDFVMEGVHENFLRMRYHEGTLQKTVECLEWMGDSELMSRRV-HSRQHFFLMAYQPATLQAVRRLIANPERPHIEFPKTYNKFRADHSSQRQL---LQSWQMEMDPGVARGLNPSAIIRDLVSPLLD--IVAPPTLRPVASQLLSEKEKGEVSELVDTMIGYGFTYKLQTGFGVNPGAGPQ---LDPALGRLAAFEGRPFQHRELTVTLREMLAHEVSLQIIRKEGAARAARAAAVNPSKLGDVSGSPADVTRSRPAKSPAKAEPGASKNGGLNGRAEAPPRKAENGKLEKKVVKAAAKVYVNYFERFKKPALKRNGV---------EEEAVPVQSVTNIRDAMPVLYKFHEGFTNAVRRPVLVKDLL 1034          
BLAST of jgi.p|Trimin1|350650 vs. uniprot
Match: W7TIW5_9STRA (Chromosome transmission fidelity n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TIW5_9STRA)

HSP 1 Score: 221 bits (564), Expect = 6.270e-57
Identity = 237/749 (31.64%), Postives = 329/749 (43.93%), Query Frame = 1
Query: 1528 RVDRRPE--SKILLLCGPPGMGKTTLAHIVAQQAGYRPLEINASDDRTASVLTDKAXXXXXXXXXXXXXXXXXXVVRAMENRALFGDQRPNLIILDEIDGAEDKAAIDAILAMAHAPLPPL-RGAAGAXXXXXXXXXXXXXXXXXXXXXXXXTHPLTRPLILICNNQYAPHLRALRPEAAVFSFRRASPQRLARRLRVICAAEAITASQPSLLALCESTGNDVRACLNTLQFVAHRTR-------QAQRPLQASGGGRVHDVSMALVAALTTGMKDERRDIFQVWNAVFTAPKSGAGGXXXXXXXXXXXXXXXXXXXDAPGRT-AGRGGAAALDLKDDDAPSGAAAVQRQLEQFNDHRRVLDGVHECYLQAKYSDPSLRRSVAAADWLAYADTLEACVVGGSEHYALRRYLPAAAAGVHVQVRCDARPPAPRLASALA--ATAAAREARSAALRAFDAG--------RHPASSGRGGGAAATEVAPLCARAMLLAPRLRCVPLELLRGAERQRLADLVSALIACGATGTVAGRSGGGX----GGDADEWVLEPPIDALTVF------EGQPLSYA-PLAGP---------MRQLVAHEVEMERVRRQSASRGNADGAA---AAXXXXXXXXXXXXXXAAAEARHASFKRAPPAPVHETAEQEQK--------RQRMDAARAAVVPFWHKAGARGTRGGAQXXXXXGKGEXXXXXXXXXXXXXXXAPLRFKYQAGYTNAVRRPVRMKDLL 3618
            R DRRPE  ++ +LL GPPG+GKTTLAH++A+  GYRPLEINASDDR+A  L +K                   + RAM+N+A+ GD+RPN IILDE DG E KAA+  I+ +  APL    +G+AG+                          PLTRPLI ICN+ Y P LRALR  A VF FRR +  RL +RL+ IC AE +     +L  LCE++G+DVR+CLNTLQF   R         Q Q             +S  L+  +  G+KD+ +D+ QV  ++F  P S A                       PG   AG    A   ++D D       V   +  ++DH  VL    E Y Q +++DPSL + + AA+WLA++D +    + G   + +     A AA +H+  R + RP   RLA         +AR +R   L++F  G        R P             V+PL     +L P LR V  +L   AE+  L  LV  L+ACG +   +  SG        G  +   + P +  L  F       G P S   P+  P         ++ L   E ++E +RR    + +A  A    ++              AAA           P    E  E   K        ++     ++         G  GTRG        G+G                + +RFKY AGYTNAVRRPV MKD++
Sbjct:   42 RRDRRPEPSARAILLAGPPGIGKTTLAHVIAEHCGYRPLEINASDDRSAGALREK-------------------MTRAMQNQAVLGDKRPNCIILDEADGIEGKAAMKMIVNIIKAPLKSKQKGSAGSKDEAGGHSGADGSVSCP---------PLTRPLICICNDLYVPALRALREVATVFRFRRRTNPRLLQRLKTICQAENLPVEGVALSVLCEASGHDVRSCLNTLQFFQARLPAAVLSQGQGQEEQDKPPAAFASHLSRQLLEYVGEGLKDQEKDMLQVCQSLFRKPASKATATPALL----------------PGEEGAGTEERAQSRVRDTD------RVMTSVASYSDHAHVLLAAQENYCQLRFTDPSLTKVLHAAEWLAFSDLVHGRQMEGL--HVMEDLHLATAAALHLLCRVETRP---RLALPRKDHEYRSARLSRQHILQSFGEGCSLQALWARRPTP------VVLDVVSPLM---HILNPSLRPVNPDLYSFAEKAGLRHLVDVLLACGISYVQSPGSGLSHPHQHSGAPERLEMLPALVHLAEFGLANDGTGAPKSETLPVQRPRPPRLLPAFVKLLATQEAKLEALRRTELRKTDALKAKKGMSSSTGQGPRSNGLPSKAAASCEATPGPNIAPLVAKEEEEPGPKAWYVKLGTKRSTTKTKSRTQTDGSPVGDTGTRG-----LDLGEG---LFPPEHKQSAAKKSTVRFKYVAGYTNAVRRPVYMKDMI 718          
BLAST of jgi.p|Trimin1|350650 vs. uniprot
Match: A0A662WL79_9STRA (AAA domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WL79_9STRA)

HSP 1 Score: 219 bits (559), Expect = 5.050e-55
Identity = 175/540 (32.41%), Postives = 232/540 (42.96%), Query Frame = 1
Query: 1144 AQARLWVDKYAPTNFAQLLSDERTNREVLRAIKAWDAFVFPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFRXXXXXXXXXQXXXXXXXXXXXXXXXXXXKPKGAGGAEGGRVDRRPESKILLLCGPPGMGKTTLAHIVAQQAGYRPLEINASDDRTASVLTDKAXXXXXXXXXXXXXXXXXXVVRAMENRALFGDQRPNLIILDEIDGA----EDKAAIDAILAMAHAPLPPLRGAAGAXXXXXXXXXXXXXXXXXXXXXXXXTHPLTRPLILICNNQYAPHLRALRPEAAVFSFRRASPQRLARRLRVICAAEAITASQPSLLALCESTGNDVRACLNTLQFVAHRTRQAQRPLQASGGGRVHDVSMALVAALTTGMKDERRDIFQVWNAVFTAPKSGAGGXXXXXXXXXXXXXXXXXXXDAPGRTAGRGGAAALDLKDDDAPSGAAAVQRQLEQFNDHRRVLDGVHECYLQAKYSDPSLRRSVAAADWLAYADTLEACVVGGSEHYALRRYLPAAAAGVH 2751
            + A LW+DKY P +F  LLSDERTNREVL  IK WD FVFP                                                                               G GGA+    D+RP  KI+L+CGPPG GKTTLA+IVA+ AGY P+E+NASDDRTASVL +K                   ++ AME ++++GD++PN +ILDEIDGA    + K+AI AI  +  APLP  +  AGA                         HPLTRPLI ICN+QYA  LR LR  A +F      PQRL  RL+ IC  E I AS  +L ALC S  NDVR CLNTLQF + + R       A+G G   + S+A + +   G KD    +F+  + VF   +S A                                              A  +Q       +   +++G+ E   +  ++DP++ +     +WL  AD  E       + +  + Y+P AA  VH
Sbjct:  244 SNATLWLDKYRPQSFLDLLSDERTNREVLSWIKKWDRFVFPKKKRANRAHPVVSPVKARGFGGVGKSPWNPSAPQHGSNGL---------------------------------------GGGGADVELEDKRPFDKIILICGPPGAGKTTLANIVARHAGYNPIEVNASDDRTASVLKNK-------------------IISAMEMQSIWGDRKPNCLILDEIDGALNGLDGKSAIAAIQEIVAAPLPSKK--AGAKTTTKNR------------------HPLTRPLICICNDQYAAVLRPLRQLAKIFVLDTPHPQRLITRLKFICRHEGIKASTGALAALCSSGDNDVRYCLNTLQFQSTQAR-------AAGVG---ESSLATLNSKLVGQKDHTHGVFEAMDLVFYESRSKAAKGELPV---------------------------------------AEKIQEAAFSLGNFPLLINGLDENVPKMVFNDPTMNKICDVFEWLGLADAWETRT-RVDQQFVFQGYIPFAAIAVH 655          
BLAST of jgi.p|Trimin1|350650 vs. uniprot
Match: A0A2P4Y368_9STRA (Chromosome transmission fidelity protein (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4Y368_9STRA)

HSP 1 Score: 207 bits (526), Expect = 7.970e-54
Identity = 170/543 (31.31%), Postives = 233/543 (42.91%), Query Frame = 1
Query: 1144 AQARLWVDKYAPTNFAQLLSDERTNREVLRAIKAWDAFVFPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFRXXXXXXXXXQXXXXXXXXXXXXXXXXXXKPKGAGGAEGGRVDRRPESKILLLCGPPGMGKTTLAHIVAQQAGYRPLEINASDDRTASVLTDKAXXXXXXXXXXXXXXXXXXVVRAMENRALFGDQRPNLIILDEIDGA----EDKAAIDAILAMAHAPLPPLRGAAGAXXXXXXXXXXXXXXXXXXXXXXXXTHPLTRPLILICNNQYAPHLRALRPEAAVFSFRRASPQRLARRLRVICAAEAITASQPSLLALCESTGNDVRACLNTLQFVAHRTRQAQRPLQASGGGRVHDVSMALVAALTTGM---KDERRDIFQVWNAVFTAPKSGAGGXXXXXXXXXXXXXXXXXXXDAPGRTAGRGGAAALDLKDDDAPSGAAAVQRQLEQFNDHRRVLDGVHECYLQAKYSDPSLRRSVAAADWLAYADTLEACVVGGSEHYALRRYLPAAAAGVH 2751
            + A LW+DKY P +F  LLSDERTNREVL  IK+WD FVFP                                               +                              K  G       D+RP +KI+L+CGPPG GKTTLA+IVA+ AGY P+E+NASDDRTASVL +K                   ++ AME ++++G+++PN IILDEIDGA    + K+AI+ I  +  APL   R   GA                         HPLTRPLI ICN+ YA  LR LR  A +F      PQRL  RL+ IC  E I A+   L ALC S  ND+R CLNTLQF   ++R A +             S + V  L+TG+   KD    +F+  + VF   +S                             + +G          +AP  A  +   +    + + ++ G+ E   +  ++DP++++     +WL  AD  E       + YA + Y+P AA   H
Sbjct:   35 SNAVLWLDKYRPQSFLDLLSDERTNREVLTWIKSWDHFVFPK----------------------------------------------KKRANGTLPVSPDKANTLGGSSKSPWNQGISKNQGNENEDDEDKRPLNKIILICGPPGAGKTTLANIVARHAGYNPIEVNASDDRTASVLRNK-------------------LISAMEMQSIWGERKPNCIILDEIDGAMNGSDGKSAIEVIQEIVSAPLQ--RKKTGAKTAAKNR------------------HPLTRPLICICNDLYASVLRPLRQMAKIFMLDAPHPQRLVTRLKYICRHEGIKATTGVLAALCSSADNDIRYCLNTLQFQTTQSRGAAK-------------SKSAVVTLSTGLVAQKDHIHGMFEALDLVFYNARS----------------------------KSAKG----------EAPV-AEKINEAVASLGNFQLLISGLDENVPKMIFNDPTMKKIWDVFEWLGLADEYENRA-RAEQQYAFQAYIPFAAVATH 439          
BLAST of jgi.p|Trimin1|350650 vs. uniprot
Match: A0A6A3ERC9_9STRA (AAA domain-containing protein n=6 Tax=Phytophthora TaxID=4783 RepID=A0A6A3ERC9_9STRA)

HSP 1 Score: 213 bits (542), Expect = 3.710e-53
Identity = 159/416 (38.22%), Postives = 203/416 (48.80%), Query Frame = 1
Query: 1156 LWVDKYAPTNFAQLLSDERTNREVLRAIKAWDAFVFPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFRXXXXXXXXXQXXXXXXXXXXXXXXXXXXKPKGAGGAEGGR-VDRRPESKILLLCGPPGMGKTTLAHIVAQQAGYRPLEINASDDRTASVLTDKAXXXXXXXXXXXXXXXXXXVVRAMENRALFGDQRPNLIILDEIDGA----EDKAAIDAILAMAHAPLPPLRGAAGAXXXXXXXXXXXXXXXXXXXXXXXXTHPLTRPLILICNNQYAPHLRALRPEAAVFSFRRASPQRLARRLRVICAAEAITASQPSLLALCESTGNDVRACLNTLQFVAHRTRQAQRPLQASGGGRVHDVSMALVAALTTGM---KDERRDIFQVWNAVFTAPKS 2379
            LW+DKY P NF  LLSDERTNREVL  IK+WD FVFP                                                         +             XXX  K +G G AE     D+RP +KI+LLCGPPG GKTTLA+IVA+ AGY P+E+NASDDRTASVL +K                   ++ +ME ++++G+++PN IILDEIDGA    + K+AI+ IL +A+APL   R  AGA                         HPL RPLI ICN+ YA  LR LR  A +F+      QRL  RL+ IC  E I AS  +L ALC S  ND+R CLNTLQF + ++R+A +   A             +  LTTG+   KD    +F+V + VF   +S
Sbjct:  229 LWLDKYKPKNFLDLLSDERTNREVLTWIKSWDRFVFPKKLRANGTLPISPA-------------------------------------------KPNGFGNKTPWASKXXXESKNQGNGHAESEEDEDKRPFNKIILLCGPPGAGKTTLANIVARHAGYNPIEVNASDDRTASVLRNK-------------------IISSMEMQSIWGERKPNCIILDEIDGAMNGSDGKSAIEVILEIANAPLQ--RKKAGAKTAAKNR------------------HPLIRPLICICNDLYASVLRPLRQMAKIFTLDAPHSQRLVTRLKHICRHEGIKASTGALAALCSSADNDIRYCLNTLQFQSTQSRRAAKDKSA-------------IVTLTTGLVAQKDHVHGMFEVMDLVFFEARS 549          
BLAST of jgi.p|Trimin1|350650 vs. uniprot
Match: A0A6G0XG15_9STRA (AAA domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XG15_9STRA)

HSP 1 Score: 210 bits (534), Expect = 6.590e-53
Identity = 169/536 (31.53%), Postives = 221/536 (41.23%), Query Frame = 1
Query: 1156 LWVDKYAPTNFAQLLSDERTNREVLRAIKAWDAFVFPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFRXXXXXXXXXQXXXXXXXXXXXXXXXXXXKPKGAGGAEGGRVDRRPESKILLLCGPPGMGKTTLAHIVAQQAGYRPLEINASDDRTASVLTDKAXXXXXXXXXXXXXXXXXXVVRAMENRALFGDQRPNLIILDEIDGA----EDKAAIDAILAMAHAPLPPLRGAAGAXXXXXXXXXXXXXXXXXXXXXXXXTHPLTRPLILICNNQYAPHLRALRPEAAVFSFRRASPQRLARRLRVICAAEAITASQPSLLALCESTGNDVRACLNTLQFVAHRTRQAQRPLQASGGGRVHDVSMALVAALTTGMKDERRDIFQVWNAVFTAPKSGAGGXXXXXXXXXXXXXXXXXXXDAPGRTAGRGGAAALDLKDDDAPSGAAAVQRQLEQFNDHRRVLDGVHECYLQAKYSDPSLRRSVAAADWLAYADTLEACVVGGSEHYALRRYLPAAAAGVH 2751
            LW+DKY P +F  LLSDERTNREVL  +K+WDA VFP                                                                             PK     +    D RPE KI+L+CGPPG GKTTLA I A+ AGY P+EINASDDRTA VL +K                   ++ AME +++FGDQRPN IILDEIDGA    E K AI A+ A+  AP  P R   G                          HPL RP+I ICN+Q+AP LR LR  A +F      P++L +RL+ IC  E + AS   L  LC    NDVR CLN LQF + +T                 ++++++  +  G KD  +  + VW  VF   K                                          D D+ S    V    ++F     +L G+HE  L   ++DP+L +   A +W+ +AD  E  V    + +AL  Y   AA  V+
Sbjct:  167 LWLDKYRPRHFVDLLSDERTNREVLLWLKSWDATVFPQKVKTNT----------------------------------------------------------------------PKSKLPEQNKAGDMRPEQKIILICGPPGAGKTTLAGIAARHAGYNPIEINASDDRTAGVLKEK-------------------IISAMEMQSIFGDQRPNCIILDEIDGALSGQEGKGAISALQALVTAPYAP-RSKKGKKAANAGG------------------HPLIRPIICICNDQFAPVLRPLRKLAKIFIMHTPEPRQLMQRLKYICKQEKVQASNSLLSTLCLRADNDVRFCLNALQFASAKTST---------------LTLSMIDNMM-GRKDVSKGAYDVWETVFYESKE-------------------------------------QQKNDSDSFS---RVFEATDRFGSQDLILSGLHENLLPLAFNDPTLSKIHNALEWMGFADLCETRV-RAHQQFALTPYTSVAAVSVY 537          
BLAST of jgi.p|Trimin1|350650 vs. uniprot
Match: A0A7S3YLZ4_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YLZ4_HETAK)

HSP 1 Score: 208 bits (529), Expect = 8.070e-53
Identity = 191/580 (32.93%), Postives = 271/580 (46.72%), Query Frame = 1
Query: 1525 GRVDRRPESKILLLCGPPGMGKTTLAHIVAQQAGYRPLEINASDDRTASVLTDKAXXXXXXXXXXXXXXXXXXVVRAMENR--ALFGDQRPNLIILDEIDG-AEDKAAIDAILAMAHAPLPPLRGAAGAXXXXXXXXXXXXXXXXXXXXXXXXTHPLTRPLILICNNQYAPHLRALRPEAAVFSFRRASPQRLARRLRVICAAEAITASQPSLLALCESTGNDVRACLNTLQFVAHRTRQAQRPLQASGGGRVHDVSMALVAALTTGMKDERRDIFQVWNAVFTAPKSGAGGXXXXXXXXXXXXXXXXXXXDAPGRTAGRGGAAALDLKDDDAPSGAAAVQRQLEQFNDHRRVLDGVHECYLQAKYSDPSLRRSVAAADWLAYADTLEACVVGGSEHYALRRYLPAAAAGVHVQVRCDARPPAPRLASALAATAAAREARSAAL---RAFDAGRHPASSGRGGGAAATEVAPLCARAMLLAPRLRCVPLELLRGAERQRLADLVSALIACGATGTVAGRS-----GGGXGGDADE--WVLEPPIDALTVFEG-QPLSYAPLAGPMRQLVAHEVEMERVRR 3222
            G  D RP++K++LL G PG GKTTLAH+VA+ AGY+PLE+NASD R+A  L +                    + RA+ +R  A  G  RP  ++LDE+DG AE  AA+  +L +A APL    G+ G                           PLTRPLILICN+ YAP LR LR  A VFSF+  S  RL +RLRVI   E +  S  SL  LC++T ND+R+CLNTLQFV    +  +     S G        AL  A+  G+KD +R IF+VWN+++ +                            P  T   G A A   ++         +   +E+  +  +VL G HE     +++DP+L ++ AA +WLA AD  +         +       AAA  +H+ +R DA   APRL    A     +E R       +  DA R  A     G AA   + PL     +L P ++ V L+L++ A++++ + LV  L +C  T  +   S      G  G    +  ++LEP +  L  F G      A LA  + Q+ A     ER+RR
Sbjct:   20 GPRDLRPQTKVILLAGAPGTGKTTLAHVVARHAGYQPLEVNASDHRSARELRE-------------------LLGRALGSRREAFGGGARPTALVLDEVDGIAEGPAAMKVLLDIAQAPLRAGSGSGGKGKKGGLP-------------------PLTRPLILICNDLYAPQLRKLRQIAKVFSFKETSEDRLMKRLRVILKQEKMDFSHESLRTLCQTTSNDIRSCLNTLQFVGLEIKNNKLKGMTSSG--------ALFRAIENGIKDGKRSIFEVWNSMYISSGKNRS--------RPAALQKKMKLFSDPSSTTAGGSAKAKPAEE---------IMDLVERGGEAAKVLAGAHEHLPLLRHNDPTLVKAAAAINWLAAADLAQ---------FRFPALGWAAAGALHLLLRADA---APRLELPRADYLHGQELRQKRFLLQQHADACRTLAVGRTLGVAALDALGPLMD---MLTPSIQAVNLDLMKPADKEKFSHLVKVLASCNLTYKLDSESYNKFREGEEGAHPSQARYLLEPDLGDLLRFGGAMARPRATLAATVAQMAAQAANYERLRR 521          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|350650 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CAX9_9STRA0.000e+0100.00AAA domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A6H5K262_9PHAE8.190e-8835.01AAA domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A4D9CU49_9STRA4.840e-6430.16AAA domain-containing protein n=1 Tax=Nannochlorop... [more]
A0A1Y1I8B2_KLENI1.970e-5829.68DNA replication checkpoint protein CHL12/CTF18 n=1... [more]
W7TIW5_9STRA6.270e-5731.64Chromosome transmission fidelity n=2 Tax=Nannochlo... [more]
A0A662WL79_9STRA5.050e-5532.41AAA domain-containing protein n=2 Tax=Nothophytoph... [more]
A0A2P4Y368_9STRA7.970e-5431.31Chromosome transmission fidelity protein (Fragment... [more]
A0A6A3ERC9_9STRA3.710e-5338.22AAA domain-containing protein n=6 Tax=Phytophthora... [more]
A0A6G0XG15_9STRA6.590e-5331.53AAA domain-containing protein n=1 Tax=Aphanomyces ... [more]
A0A7S3YLZ4_HETAK8.070e-5332.93Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_68contigContig_68:378267..387486 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|350650|estExt_Genemark1.C_Ctg_680056
BRITEko00000,ko03036
KEGG koko:K11269
GOsGO:0000003,GO:0000070,GO:0000228,GO:0000278,GO:0000280,GO:0000724,GO:0000725,GO:0000785,GO:0000790,GO:0000819,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005657,GO:0005694,GO:0005737,GO:0005739,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006270,GO:0006275,GO:0006281,GO:0006302,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0007049,GO:0007059,GO:0007062,GO:0007064,GO:0007127,GO:0007131,GO:0007140,GO:0007276,GO:0007283,GO:0008150,GO:0008152,GO:0008283,GO:0009058,GO:0009059,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010556,GO:0010557,GO:0010604,GO:0016043,GO:0019219,GO:0019222,GO:0019953,GO:0022402,GO:0022412,GO:0022414,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031390,GO:0031974,GO:0031981,GO:0032501,GO:0032504,GO:0032991,GO:0033554,GO:0034641,GO:0034645,GO:0035753,GO:0035825,GO:0043085,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043570,GO:0043596,GO:0044093,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044444,GO:0044446,GO:0044454,GO:0044464,GO:0044703,GO:0045005,GO:0045935,GO:0046483,GO:0048232,GO:0048285,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048609,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051052,GO:0051054,GO:0051171,GO:0051173,GO:0051276,GO:0051321,GO:0051338,GO:0051347,GO:0051704,GO:0051716,GO:0051983,GO:0051985,GO:0060255,GO:0061982,GO:0065007,GO:0065009,GO:0070013,GO:0071704,GO:0071840,GO:0080090,GO:0090304,GO:0090329,GO:0098813,GO:0140013,GO:0140014,GO:1900262,GO:1900264,GO:1901360,GO:1901576,GO:1903046,GO:1903047,GO:2000112,GO:2000278,GO:2000573
Preferred nameCHTF18
DescriptionATP binding
COG categoryO
Max annot lvl2759|Eukaryota
EggNOG OGsKOG1969@1|root,KOG1969@2759|Eukaryota
Evalue1.51e-93
Seed ortholog2880.D7FQ00
Hectar predicted targeting categoryother localisation
TranscriptId350972
TrackFilteredModels1
ProteinId350650
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|350650gene_8496Tribonema minus UTEX_B_3156 geneContig_68 378267..387486 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_8496_12exon_8496_12Tribonema minus UTEX_B_3156 exonContig_68 378267..378826 -
exon_8496_11exon_8496_11Tribonema minus UTEX_B_3156 exonContig_68 379321..379509 -
exon_8496_10exon_8496_10Tribonema minus UTEX_B_3156 exonContig_68 379539..379669 -
exon_8496_9exon_8496_9Tribonema minus UTEX_B_3156 exonContig_68 380088..380370 -
exon_8496_8exon_8496_8Tribonema minus UTEX_B_3156 exonContig_68 381193..381476 -
exon_8496_7exon_8496_7Tribonema minus UTEX_B_3156 exonContig_68 382198..382290 -
exon_8496_6exon_8496_6Tribonema minus UTEX_B_3156 exonContig_68 382703..382814 -
exon_8496_5exon_8496_5Tribonema minus UTEX_B_3156 exonContig_68 383568..383782 -
exon_8496_4exon_8496_4Tribonema minus UTEX_B_3156 exonContig_68 384134..384316 -
exon_8496_3exon_8496_3Tribonema minus UTEX_B_3156 exonContig_68 384968..385024 -
exon_8496_2exon_8496_2Tribonema minus UTEX_B_3156 exonContig_68 385139..386725 -
exon_8496_1exon_8496_1Tribonema minus UTEX_B_3156 exonContig_68 387388..387486 -


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR3_8496UTR3_8496Tribonema minus UTEX_B_3156 three_prime_UTRContig_68 378267..378438 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_8496CDS_8496Tribonema minus UTEX_B_3156 CDSContig_68 387388..387486 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|350650Trimin1|350650|estExt_Genemark1.C_Ctg_680056Tribonema minus UTEX_B_3156 polypeptideContig_68 378439..387486 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_8496 ID=mRNA_8496|Name=jgi.p|Trimin1|350650|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=3793bp|location=Sequence derived from alignment at Contig_68:378267..387486- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGAACGACTTTGAGGAGCCGTACGACTTTCCGGAGGAGGAGCAGGAGGA
ACCGGATTGGCTTGGCTACGATGAAGAGGCTCAGGCGGCTATGCACGAGG
ACGAGCCGCCGCCGCCGCCGCCGGAGAGCCCCGACGGCGGCAAGCGGCAG
CAGACGCTCTCTTTCGTCAGCGCCTCGCAGCAGCAGCACACCAAAACTGG
GCGTGCCGATAGCCCCCGCCGAGCCGCGGCGATGCCACCGCTCAAGCTGT
ACGACCGCGCATCCGACGACGAGAACGCGCAGGCGCCGCCGCAGCGGCGC
CGCCCGCTGGCGCCCTCCGCCGCGGGCGTCAACGGCACCGGCACGAGCAC
CAGCAGCAGCAGCAGCAGCGGCAGCAGCGGCGCTGCGCTGAAGAGCGCGT
TCGCGACGACAAAGCTGGACATGGACGCGCCAGCAGCGCTCGGCGGATGG
CGCGCCAAGCGCGCGCGCACCGGCGACGCGAGGCATGCGCAGCACCACCC
GCAGCAGTCGGCGTCGCTGGCGCTGCTGCACGCGCGCCGCCTGCTGCGCG
CGCCCGCCGACGGCGGCGCCGGAGCCGGGACGCAGGAAAGCGAGCTGGTC
ACCCAGGCGCCGCTGTTCCGCGCCGCGCGCGACCGCAGCGCCGTGCTGGC
GCGCCCTCCGCTTGCCACCGGCGGCGGCGGCGACGGCGTTGGCGGCGACG
GCGGCGGCGGCGACGGCGGCAGCGGCGCAAGCGCGGCGGCAGGCGACGAC
TTTGTAGAGGTGCTGACGGGCAGCGGCGCCAAGGCATTTCTGCGCGCGCT
GCGCCCTGCGGAGTCGGCGGCTGTTCTGGCGGCGTGCCAGCGCGCGCAGC
GCAGCGGCGGCGGCGGCAGCGGCTTGCTTGAGTGCCCCATGGAGACGCTG
ATGGCGCGCGCAGAGCGGCGGCAGGTCGAGCGCCTGCACCGCAAGACCAT
GGTCGCGGCGGACGCCGCTGCCAAGGCGCCCGCCGCCGCCGCAGCAGCAT
CAGCAGCGGCAGCAGCGGGTGAAGATGGCGCGAGTGACCTTCAAGACGGC
GCAGAGACCGCAGGTGCTGCGAGCGGGGGGTCAGCGGCGAGCCCGAACCG
GCGAGACGCTGCGGCGGCGGCGGCGGCGGCGGCAGCAGCGGCGGCGCAGG
CGCGCCTCTGGGTGGACAAGTATGCGCCCACCAACTTTGCGCAGCTGCTC
AGCGACGAGCGCACGAACCGCGAGGTGCTGCGCGCCATCAAGGCGTGGGA
CGCGTTTGTGTTCCCCGCCGCCGCGGCCGCGTCCGCAGCCGCTGCCGCAG
CGCGCGAGGGCGCCACCTCCGCTGCCGCCAGCGCCAACGCCCGCGGCAAG
GGCGGTGCCAGCGGCGGTGGCGGCGGCAGCGGCGGCGGCGGCGGCGGTGG
AGCATTCCGCGGCAAAGGTGGCCGGGGTAGTGGAGACCAGGGAGGGGGGG
CGGCTGGGGGGCGTGGGGGGGGCGCAGCGGCGGCGGCAGCGGCGAAACCG
AAGGGGGCGGGGGGCGCGGAGGGGGGGCGCGTCGACAGGCGGCCGGAGAG
CAAGATCCTGCTGCTGTGCGGGCCGCCGGGGATGGGGAAGACGACGCTGG
CGCACATCGTCGCGCAGCAGGCGGGGTACCGGCCGCTGGAGATCAACGCC
AGCGATGACCGCACGGCGTCAGTGCTGACGGACAAGGCACCGCTGGAGAT
CAACGCCAGCGACGACCGCACGGCGTCGGTGCTGACGGACAAGGTTGTGC
GTGCCATGGAGAACCGCGCCCTGTTTGGCGACCAGCGCCCCAACCTCATC
ATCCTTGATGAGATTGACGGAGCGGAGGACAAGGCTGCTATAGACGCCAT
CCTTGCGATGGCGCACGCGCCGCTGCCGCCACTGCGCGGCGCCGCGGGCG
CTGCTGCCGCCTGCGGCAAGAAGAAGGGCTCCCGAGGCGGCGGCGGCGCG
CGCGGCGGCGGCGGCGGCGGCGGCACGCACCCCCTCACCCGCCCCCTCAT
CCTCATCTGCAATAACCAGTACGCGCCGCACCTGCGCGCGCTGCGCCCGG
AGGCGGCGGTGTTCAGCTTCCGGCGCGCGTCGCCGCAGCGCCTGGCGCGG
CGGCTGCGCGTCATCTGTGCCGCCGAGGCCATCACCGCCAGTCAGCCATC
GCTGCTGGCGCTGTGCGAGAGCACCGGCAACGACGTGCGCGCGTGCCTCA
ACACGCTGCAGTTCGTGGCGCACCGCACGCGCCAGGCGCAGCGGCCGCTA
CAGGCTAGCGGCGGGGGGCGCGTGCACGATGTCTCCATGGCGCTCGTGGC
AGCGCTCACCACCGGCATGAAGGACGAGCGCCGCGACATTTTCCAGGTGT
GGAACGCCGTGTTCACGGCCCCAAAGAGCGGCGCGGGCGGCGGCATGCGC
GCCGCCGCACTGGCCGCAGCAGCGCACACTGCCGCTGCCGCCGCTGCCGA
CGCCCCCGGCCGCACCGCCGGTCGCGGCGGCGCAGCAGCGCTCGACCTCA
AAGACGATGACGCGCCGAGCGGCGCCGCGGCGGTGCAGCGGCAGCTGGAA
CAGTTCAACGACCATCGGCGCGTGCTCGATGGCGTGCACGAGTGCTACCT
GCAGGCCAAGTACAGCGACCCGTCGCTGCGGCGCTCCGTCGCCGCAGCGG
ACTGGCTCGCGTACGCCGACACCCTCGAGGCGTGCGTCGTCGGCGGCTCC
GAGCACTACGCGCTGCGCCGCTACCTGCCCGCCGCCGCCGCCGGCGTGCA
CGTGCAAGTGCGCTGCGACGCGCGGCCGCCGGCGCCGCGCCTCGCCAGCG
CGCTCGCCGCGACGGCGGCGGCGCGAGAGGCGCGCAGCGCCGCGCTGCGC
GCCTTCGACGCCGGCCGGCACCCCGCCTCGAGCGGCCGCGGCGGCGGCGC
GGCGGCGACGGAGGTGGCGCCGCTGTGCGCGCGCGCCATGCTCCTCGCGC
CGCGCCTCCGCTGCGTGCCGCTCGAGCTGCTGCGCGGCGCCGAGCGGCAG
CGCCTCGCCGACCTCGTGTCAGCGCTCATCGCGTGCGGCGCGACCGGCAC
CGTCGCCGGCCGCAGCGGCGGCGGCGGCGGCGGCGACGCGGACGAGTGGG
TGCTAGAGCCGCCTATCGACGCGCTGACCGTGTTTGAGGGGCAGCCGCTG
TCGTACGCGCCGCTGGCGGGGCCGATGCGGCAGCTCGTCGCACACGAGGT
GGAGATGGAGCGGGTGCGGCGGCAGAGCGCGAGCAGGGGCAACGCCGACG
GCGCCGCCGCCGCTCCCGAAGACAAAGACGACTCTTCGCAGCAGCGCGCC
GCACCCGCCGCCGCCGAAGCGCGCCACGCGTCTTTCAAGCGCGCGCCGCC
CGCCCCCGTGCACGAGACCGCGGAGCAGGAGCAGAAGCGCCAGCGCATGG
ACGCAGCGCGCGCCGCCGTTGTGCCGTTCTGGCACAAGGCGGGGGCCAGG
GGGACGCGCGGGGGGGCGCAAGGGGGGGTACAGGGGGGGAAGGGGGAGGG
GGGGGGGGGAGGGGGGGCGCAGGCGGCGGGGGCGGCGGCGGCGGCGCCGC
TGCGGTTCAAGTATCAGGCGGGGTACACAAATGCTGTGCGGCGGCCGGTG
CGCATGAAGGATCTGCTATAGGGAGTGGCGCAGGTTTGTGGCTGCATGAG
TGCAGTAGAGAGGGTGACGCGGCGCTGGCGGCTGAGGCTGCTGGGGGTGG
CTGCAGTGCTTGCAGTGCTGATCTCGGTGGTCGTGTAGAATTTGAAACAC
TGAGTTGACAGCATGATTAGCCAAGTTGGTGCTTAAATGATAC
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protein sequence of jgi.p|Trimin1|350650

>Trimin1|350650|estExt_Genemark1.C_Ctg_680056 ID=Trimin1|350650|estExt_Genemark1.C_Ctg_680056|Name=jgi.p|Trimin1|350650|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=1207bp
MNDFEEPYDFPEEEQEEPDWLGYDEEAQAAMHEDEPPPPPPESPDGGKRQ
QTLSFVSASQQQHTKTGRADSPRRAAAMPPLKLYDRASDDENAQAPPQRR
RPLAPSAAGVNGTGTSTSSSSSSGSSGAALKSAFATTKLDMDAPAALGGW
RAKRARTGDARHAQHHPQQSASLALLHARRLLRAPADGGAGAGTQESELV
TQAPLFRAARDRSAVLARPPLATGGGGDGVGGDGGGGDGGSGASAAAGDD
FVEVLTGSGAKAFLRALRPAESAAVLAACQRAQRSGGGGSGLLECPMETL
MARAERRQVERLHRKTMVAADAAAKAPAAAAAASAAAAAGEDGASDLQDG
AETAGAASGGSAASPNRRDAAAAAAAAAAAAAQARLWVDKYAPTNFAQLL
SDERTNREVLRAIKAWDAFVFPAAAAASAAAAAAREGATSAAASANARGK
GGASGGGGGSGGGGGGGAFRGKGGRGSGDQGGGAAGGRGGGAAAAAAAKP
KGAGGAEGGRVDRRPESKILLLCGPPGMGKTTLAHIVAQQAGYRPLEINA
SDDRTASVLTDKAPLEINASDDRTASVLTDKVVRAMENRALFGDQRPNLI
ILDEIDGAEDKAAIDAILAMAHAPLPPLRGAAGAAAACGKKKGSRGGGGA
RGGGGGGGTHPLTRPLILICNNQYAPHLRALRPEAAVFSFRRASPQRLAR
RLRVICAAEAITASQPSLLALCESTGNDVRACLNTLQFVAHRTRQAQRPL
QASGGGRVHDVSMALVAALTTGMKDERRDIFQVWNAVFTAPKSGAGGGMR
AAALAAAAHTAAAAAADAPGRTAGRGGAAALDLKDDDAPSGAAAVQRQLE
QFNDHRRVLDGVHECYLQAKYSDPSLRRSVAAADWLAYADTLEACVVGGS
EHYALRRYLPAAAAGVHVQVRCDARPPAPRLASALAATAAAREARSAALR
AFDAGRHPASSGRGGGAAATEVAPLCARAMLLAPRLRCVPLELLRGAERQ
RLADLVSALIACGATGTVAGRSGGGGGGDADEWVLEPPIDALTVFEGQPL
SYAPLAGPMRQLVAHEVEMERVRRQSASRGNADGAAAAPEDKDDSSQQRA
APAAAEARHASFKRAPPAPVHETAEQEQKRQRMDAARAAVVPFWHKAGAR
GTRGGAQGGVQGGKGEGGGGGGAQAAGAAAAAPLRFKYQAGYTNAVRRPV
RMKDLL*
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mRNA from alignment at Contig_68:378267..387486-

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_8496 ID=mRNA_8496|Name=jgi.p|Trimin1|350650|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=9220bp|location=Sequence derived from alignment at Contig_68:378267..387486- (Tribonema minus UTEX_B_3156 )
ATGAACGACTTTGAGGAGCCGTACGACTTTCCGGAGGAGGAGCAGGAGGA ACCGGATTGGCTTGGCTACGATGAAGAGGCTCAGGCGGCTATGCACGAGG TACGCTACTGTCAAAGAAATCACACTGCGAGACGATGGTTATACGCAAGC CCAAGCCATCATTGCAGGGAGGCCTGGTCGGGGAAGCAGCAGAGTCGCGC GGGCTGGTTGAGTCTGGCGAGCGTATCACGTAGGTACACTTGTTGTTCAG ATGGCTCACAGAGCACAAGCCGATCCGGGCTCAGATAAATAGAATCAGTG CCTGCATCGTCAAGGCACCGAATGTGGGTGGTGATCATTGCGTAGATGCG ACAAGCAAGCGCATCCGCACTCATGTGTACCGGTGATACGTGCTGTACGC CCTTCATCGGGCATAGCCAGCAACCTGCCTGCTTTAAACAAAAGAGTTGT TGTGAGCTAAACTGATGCACAACACGCATGCAGTTGGTGGGGTGAGCATA TGTAGCCTTTCTAAACATCAGGGATGTACTTGACATGCTGTGGAAAACAG AATCGATCCCTCCTGCACCGCCCGTGGATAATGAGTGTAGATTTGGTGCA TGGCAGGCTCGTCGTGCCAGCATTCCCAAAGGTTCCAGTCGCTCAAGAGA GCAATCTTCTGGCATCCACGTGGTGCATTGTACAAGTGATTGCAATGTCC CGTTGTGCCATACGTGAACATTCAGTGTAAACTGCGCGCCACGCTGCTGC GCGTGCCTCAGGACGAGCCGCCGCCGCCGCCGCCGGAGAGCCCCGACGGC GGCAAGCGGCAGCAGACGCTCTCTTTCGTCAGCGCCTCGCAGCAGCAGCA CACCAAAACTGGGCGTGCCGATAGCCCCCGCCGAGCCGCGGCGATGCCAC CGCTCAAGCTGTACGACCGCGCATCCGACGACGAGAACGCGCAGGCGCCG CCGCAGCGGCGCCGCCCGCTGGCGCCCTCCGCCGCGGGCGTCAACGGCAC CGGCACGAGCACCAGCAGCAGCAGCAGCAGCGGCAGCAGCGGCGCTGCGC TGAAGAGCGCGTTCGCGACGACAAAGCTGGACATGGACGCGCCAGCAGCG CTCGGCGGATGGCGCGCCAAGCGCGCGCGCACCGGCGACGCGAGGCATGC GCAGCACCACCCGCAGCAGTCGGCGTCGCTGGCGCTGCTGCACGCGCGCC GCCTGCTGCGCGCGCCCGCCGACGGCGGCGCCGGAGCCGGGACGCAGGAA AGCGAGCTGGTCACCCAGGCGCCGCTGTTCCGCGCCGCGCGCGACCGCAG CGCCGTGCTGGCGCGCCCTCCGCTTGCCACCGGCGGCGGCGGCGACGGCG TTGGCGGCGACGGCGGCGGCGGCGACGGCGGCAGCGGCGCAAGCGCGGCG GCAGGCGACGACTTTGTAGAGGTGCTGACGGGCAGCGGCGCCAAGGCATT TCTGCGCGCGCTGCGCCCTGCGGAGTCGGCGGCTGTTCTGGCGGCGTGCC AGCGCGCGCAGCGCAGCGGCGGCGGCGGCAGCGGCTTGCTTGAGTGCCCC ATGGAGACGCTGATGGCGCGCGCAGAGCGGCGGCAGGTCGAGCGCCTGCA CCGCAAGACCATGGTCGCGGCGGACGCCGCTGCCAAGGCGCCCGCCGCCG CCGCAGCAGCATCAGCAGCGGCAGCAGCGGGTGAAGATGGCGCGAGTGAC CTTCAAGACGGCGCAGAGACCGCAGGTGCTGCGAGCGGGGGGTCAGCGGC GAGCCCGAACCGGCGAGACGCTGCGGCGGCGGCGGCGGCGGCGGCAGCAG CGGCGGCGCAGGCGCGCCTCTGGGTGGACAAGTATGCGCCCACCAACTTT GCGCAGCTGCTCAGCGACGAGCGCACGAACCGCGAGGTGCTGCGCGCCAT CAAGGCGTGGGACGCGTTTGTGTTCCCCGCCGCCGCGGCCGCGTCCGCAG CCGCTGCCGCAGCGCGCGAGGGCGCCACCTCCGCTGCCGCCAGCGCCAAC GCCCGCGGCAAGGGCGGTGCCAGCGGCGGTGGCGGCGGCAGCGGCGGCGG CGGCGGCGGTGGAGCATTCCGCGGCAAAGGTGGCCGGGGTAGTGGAGACC AGGGAGGGGGGGCGGCTGGGGGGCGTGGGGGGGGCGCAGCGGCGGCGGCA GCGGCGAAACCGAAGGGGGCGGGGGGCGCGGAGGGGGGGCGCGTCGACAG GCGGCCGGAGAGCAAGATCCTGCTGCTGTGCGGGCCGCCGGGGATGGGGA AGACGACGCTGGCGCACATCGTCGCGCAGCAGGCGGGGTACCGGCCGCTG GAGATCAACGCCAGCGATGACCGCACGGCGTCAGTGCTGACGGACAAGGT GAGGCACCCATGGGCATGTATGACTTCAACAAACACAATCACGCCGGCAA GAGTCTGGAGCTGAGCGTGCCGCGGTACGTACCTTGCGGTTTCCAGCGAA TCGGCCACAGAGGCACCGCTGGAGATCAACGCCAGCGACGACCGCACGGC GTCGGTGCTGACGGACAAGGTGAGGCGCGCGCGGCGGCGGCGGCGGCGGC GGCGAGCGGCGATGCTGCAAAAGACACGAGGGCGAGCTCTTGATGATGCG GGGTGTGTGTGAGGCCGGCGAGAGTCTGGAGTGGGGTGTGTGCGCGCTGC TGTTGCCGGCCGTACTCATCGGCGGCCGGCCACACTGCTGCGGGCTCTTG CTGTCAGTGGTCCGCCATATGTTTGAACAGGTCTCGGTGTTGAGGTTCCA GCCCCCACTGCCCGTCCTCATACCACACGTGATCTCTGCCAAAAGCGCTG CTATATGGCTGATGCTCAAAGTGGCGCCTGTACCGGCACCAGGGTGCAAG CTCCAACTCTAACCCTAATTATAATTTTAATCAGGGCCGTTGAGATGGCG ACTGGCGCCTCTGACACCGCGCCGCCACCCTATTGCGCTTCCACCTGCAC ACATCTCGTCACGCGTACTTCAAGTTTAAGCCACCGCCAACTTCATGCAG AGTCTGCGGAAATACTCTCAACAGCTACTGATGCAAGTGCGCAAAGGAAA CTGAGGCCCTAGATGCTAAGCCAATTGTCCATCTTAGGGCTAGGGTTAGG GTCCGAAATAGGTCAAAGTTGGGGTTAGGCTTTAGATGCTAAGCCAAGTG TCCACCTTGCCGACGCGCAGGTTGTGCGTGCCATGGAGAACCGCGCCCTG TTTGGCGACCAGCGCCCCAACCTCATCATCCTTGATGAGATTGACGGAGC GGAGGACAAGGCTGCTATAGACGCCATCCTTGCGATGGCGCACGCGCCGC TGCCGCCACTGCGCGGCGCCGCGGGCGCTGCTGCCGCCTGCGGCAAGAAG AAGGTGACCGTTCTATGACGTCTTTCGGAGCGCCATGTGCGTTATGCTGG ATGAGGGCTATGTACCGCTGACGCATCTCGCGCAGTGCCAATCATTGAAA CATTGAAAGGCGTCCGGGCCGCCGCAGCTGCGCAAACGCAAGCGCGCGGC GCAGCGGGTGCTGCGGCGAACGACGAGAAACAGGCATGTATCATGCACTT GAAGTGCACCAACGAGGGCAAGTCACGCCGAGGCATGTTGGCGATCACAC GTCATCGCTACAGCTATGCACGCACTCTGCGCAACGACGTAGCCTGGCGC GTTTTCTCACGACGTCTCACTCCACCACGGCTCATCCGCCGCTGCGTGAC GCAGGGCTCCCGAGGCGGCGGCGGCGCGCGCGGCGGCGGCGGCGGCGGCG GCACGCACCCCCTCACCCGCCCCCTCATCCTCATCTGCAATAACCAGTAC GCGCCGCACCTGCGCGCGCTGCGCCCGGAGGCGGCGGTGTTCAGCTTCCG GCGCGCGTCGCCGCAGCGCCTGGCGCGGCGGCTGCGCGTCATCTGTGCCG CCGAGGCCATCACCGCCAGGTATGTATGAAAACGAATCAAAAGATCGTAG AGCTCTAGGTGACAAGGGATAGTTAGCCGCAAGTGCCTTCCACCAATAAC CGTGGTCGCCGCTGCTGCAGCAAGTGGCCACGAGTCAAACAGTACCACCG TATCCACAGTAGTCAAAAACACTTCTGTGTGCAAGCTTTTAGCGTTCGAG AGTATGGATGGAGGACGCTTCAAGTGCATAGAAGTGTGAAAGTTGAGGCA GTGGAGGCACATGTGACCTAGTTGCAAATGCGAGGCATGGTTTAGTTTGA GATGAAGAATCTGCGCCGGCTGCGCGTATCTGCGCCGCCGAGGCCGTCAC CGCCAGGTATGTATGTACGGAGGGCGCTTCGAGCGCAGATGAAAGTTGAA GTTGAAGACGATGGTGCAGAAAAGGCCCGCGGTTGACTATCTGTAATGCA AGTGCAAGCATTGCTTCGTCTGGAAAGAAATTGTCTGCACCGTCTCGGAG GCGTTTTGATGGGACGGTAACAGCTTTATCTGTCGCTTACGAAGCATGGG CATTGACCTGAAGCAGGTGTTAACGAATACAGTCGTGCTGACTGCGAACG TCAGTGCCGTTTGCTGCGCGACTCACCCACCGCACCGGCACCGAACAACA TGGCGTCTGATATCACATTGATAACTTTGTTGTGTTGTATGTAATCTTTA CAATCCTACACACCAGGCCCAAAGTCAGCAACGTTGCTGCCCCCCCCCCC CCCCCCCCCCCCCCCCTTGCAGTCAGCCATCGCTGCTGGCGCTGTGCGAG AGCACCGGCAACGACGTGCGCGCGTGCCTCAACACGCTGCAGTTCGTGGC GCACCGCACGCGCCAGGCGCAGCGGCCGCTACAGGTTTGCGCCCGCTGCT ATCAGGGCGAAGTGCGCGCAATCAATAATGTGCAGCAGTACTCAATCCGG CGGTTGTCGATGCGCTGCGCCAGCGGAGTATGTAGCAGCACCATCGTGTT TGTGTGGCTGGCGTACACACTTTGCCTCTTGTCACTGTGCGTTTGCTGTC TTGACGCCTGCTGACAGCCGCCGTGGTTGGCGCACACCTTCTGCTGGGAG CTGCTGCACCTGTGAGACGCTGCTGTTCGCTGCGCCGCAGTCGCGCCTGC TCAGTTGCGCTGTAACTGCTGTAACTGCCACTCCAGCGCGTTAGACAGCC GCCATCATCTCTAGCCATTGAGCACGGCCTGTTCGCTGCGCGATTCACGC CTGCCACGCTTTTACTGTGGCACCTGCTTCCCTCATTCGTTCACAGGCTA GCGGCGGGGGGCGCGTGCACGATGTCTCCATGGCGCTCGTGGCAGCGCTC ACCACCGGCATGAAGGACGAGCGCCGCGACATTTTCCAGGTACGCATTAG TAAGCCTGACGCAGCGTGTCTTCGCGAGCGCCACTCGTGCTGGTGCCCAA CACATGTAGCATGCGCTTCGCTGACCAGCTTCAGGGATTTGATCGGCGCG AACAGGCATACGCTGCGGCAGCTGAGGTCGCGCCGCTGCAGCGAGACCAC CATGGAGCGTGTGCCGCCGTAGTTGCTCTGACAGCGTTGGCGGCGTGTAT GAGGACTCCGACAACAAGTGCTGTCGTTGTGGCGTGTCCATACATGGGGG TCAGGGCCTGGGCCGGGCGTTGGAACTAGGCAATCAAAAGAGTCTGTAAA ACGAGCGCTTACGCACACTGCTCGAGATCAGACTCATATCTTAGCTTTGT GAGCGCATATAGCATGTTCTTCGTCGCGCCGGCGTTGGCAATGCAAATGC CCTTGCGCTCTCAGCTGAACTCTCTTAGCTGTGCTTCGAGCAGAAGTGAC TGCTGGGCACCTGCCACATGCTTCAGCTGACGGTACAGCAGTCAGGGGCA CCGCTGCTGCCACTTGACGTATCCGCGACACCGGTGCTGCTTGCAGCTGC TGTTAGAACCCAAAATCGCACCAAAATTGCACCCACTTGCACAGGTTGGC ACAGACAGGCCGTTATGTCGCGTTTCACCGAAAGCAGCTGCGGAACGCAT ACGCGGATCACGTTTGTCCTCAAAGCACACGGCCACACTGCCGCCTCGCC CCGACCGCAGGTGTGGAACGCCGTGTTCACGGCCCCAAAGAGCGGCGCGG GCGGCGGCATGCGCGCCGCCGCACTGGCCGCAGCAGCGCACACTGCCGCT GCCGCCGCTGCCGACGCCCCCGGCCGCACCGCCGGTCGCGGCGGCGCAGC AGCGCTCGACCTCAAAGACGATGACGCGCCGAGCGGCGCCGCGGCGGTGC AGCGGCAGCTGGAACAGTTCAACGACCATCGGCGCGTGCTCGATGGCGTG CACGAGTGCTACCTGCAGGCCAAGTACAGCGACCCGTCGCTGCGGTGAGT GGGCAGCACGCGCGCCGCCGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTG CTGCTGCTGCTGCTGCTGTGTGGTGGGCGTGGGCGAGCGCCGCTGCTGCG GGGTGGGCCGAGCGCTGCCATAGCAGGCGTGAGCGTTGCTGCTGCTGCTG CTGCGGCGGCGGCGGTGGCGGTGTGTACGCTGCTGCGGCTGCTGCGGCGG CGTGTACGCTGCCGCAGTGACTGAGTGGTGCCGCAGCGAGTGACCTGAGC GCTGCTGTGACTGCTGCAGTGAGGCAGCTTTCGCCAGTGACTGCTGCCAG GTGGCTGGTGCTGACACGCCCGAATAGTTCGCACTTGCCGGCTTGTCGGC TGTACCAGTCCATTCAGTGCGCTAGTGAGCTGCACACCCATGTCAGTGGT GCAGTGTCTCGCATTCCGGTTTGCTCACTTGTGTCCTTGTGGTCATGCCT TACGCGGAAGCACCACCGCGAATGCCTGATTTCGTGTCATTGCATGTACG GCTGCCCATGCACTGATGCAGCACCCGCCGCCATCAGACTCCCAGCCTGC AGAAGCACGCGCCGGTTGGCTCATGCGCTTTCGCGGCACTCAGCACTCAG TGCTCAGCATGTTGTCTGCATCAACGCCCTAATAAGTCAGAGCAGCCCAC GCCTACTGACGGCAGCCCGCGCACGCCGGCACCAGAAACGCACGCCTTAA CGCAACGCTCGCAGCGTCCGACGCCCTGCACCCCTTACCTCTACTTTCAT TACACTCTCTGCCACGACCTCACCGCTGCCGTCCCCCCCACCCCCCCCGC CTTCCCCCACACACAGGCGCTCCGTCGCCGCAGCGGACTGGCTCGCGTAC GCCGACACCCTCGAGGCGTGCGTCGTCGGCGGCTCCGAGCACTACGCGCT GCGCCGCTACCTGCCCGCCGCCGCCGCCGGCGTGCACGTGCAAGTGCGCT GCGACGCGCGGCCGCCGGCGCCGCGCCTCGCCAGCGCGCTCGCCGCGACG GCGGCGGCGCGAGAGGCGCGCAGCGCCGCGCTGCGCGCCTTCGACGCCGG CCGGCACCCCGCCTCGAGCGGCCGCGGCGGCGGCGCGGCGGCGACGGAGG TGCGTTGTTTCGTGCACGCGTCGGAGTGAATTTCTCCTCAGAGGTGGATG GACGAGCGCATTGCGTGGATGCCGCTATTGAAGGAGGGTGAAGCAGCGTG CGGGCATTTGGGCATGCACAATTCTGGATGCGCGAAGGCCCGTTCTCGTC CTCAAAAACATGGTACCTGAAGGTGCTTCCCATCGCTTGCGCGCGAGTCA ATGCGTCACACGCGTTTGCAACGCGCCTCCCAGCAACTGTGCAAACCCTG GCCCTAACTCCCACCCCACGAGTTCATGGGTGTTCGTCTCTAACCTGCGC ATTCACGTAAAATGAACCTGCAAACTCGGCAATTCTTCAACGGCGCCGAC GCACATGCACATGCGCGTCGATCGACGGCTGAGCCGAGACCACTCCCGCG CCGCGCCGCGTGCGCAGGTGGCGCCGCTGTGCGCGCGCGCCATGCTCCTC GCGCCGCGCCTCCGCTGCGTGCCGCTCGAGCTGCTGCGCGGCGCCGAGCG GCAGCGCCTCGCCGACCTCGTGTCAGCGCTCATCGCGTGCGGCGCGACGT TCGCGCGCGCGCGCGCGGCGTTGGCAGCGGCACCGTCGCCGGCCGCAGCG GCGGCGGCGGCGGCGGCGACGCGGACGAGTGGGTGCTAGAGCCGCCTATC GACGCGCTGACCGTGTTTGAGGGGCAGCCGCTGTCGTACGCGCCGCTGGC GGGGCCGATGCGGCAGCTCGTCGCACACGAGGTGGAGATGGAGCGGGTGC GGCGGCAGAGCGCGAGGTGCGTCCACAGTTAAAGTTGGGTAGTTCCGACA CGTGATCGCGCTGCACGGCCTGGTTCTGCTGCGGTTCGGCGAGGGCGCAG CTGCGGCGCGCGTGCACACGGCGCGCTGTCGTGCACCACGTCATGAAGCC TGTGGTGCTTGCTTTCAACGCAAGTGTACTGATTTAGCTGCTGGTGGTAG GTGCTGTGTTGGGCGACAGGCGACGGTGACATGCAGGTTTGCAGGCACGA CATCAAGTGTGAACCAACTGAGACTGATGCGACTTGTGCACGACGCCGCA TCGTACCAACACGCAACAAAAAACTTCTCAAAAGCTGTACTGGATTGCCA GCAAATGGTAGCAAGTGCGCAGGTGCTCCGCCCCCAGGACGCCAGTACAC TGTCGCATGCTCAACCCGCGTACGCCCCAACCAGCGTACCCGCCCCTGCC CACAACCGACCAACAACAACCATCAACACTGCCGTGCTGCCCTGCCGCGC CGACACGCAGCAGGGGCAACGCCGACGGCGCCGCCGCCGCTCCCGAAGAC AAAGACGACTCTTCGCAGCAGCGCGCCGCACCCGCCGCCGCCGAAGCGCG CCACGCGTCTTTCAAGCGCGCGCCGCCCGCCCCCGTGCACGAGACCGCGG AGCAGGAGCAGAAGCGCCAGCGCATGGACGCAGCGCGCGCCGCCGTTGTG CCGTTCTGGCACAAGGCGGGGGCCAGGGGGACGCGCGGGGGGGCGCAAGG GGGGGTACAGGGGGGGAAGGGGGAGGGGGGGGGGGGAGGGGGGGCGCAGG CGGCGGGGGCGGCGGCGGCGGCGCCGCTGCGGTTCAAGTATCAGGCGGGG TACACAAATGCTGTGCGGCGGCCGGTGCGCATGAAGGATCTGCTATAGGG AGTGGCGCAGGTTTGTGGCTGCATGAGTGCAGTAGAGAGGGTGACGCGGC GCTGGCGGCTGAGGCTGCTGGGGGTGGCTGCAGTGCTTGCAGTGCTGATC TCGGTGGTCGTGTAGAATTTGAAACACTGAGTTGACAGCATGATTAGCCA AGTTGGTGCTTAAATGATAC
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Coding sequence (CDS) from alignment at Contig_68:378267..387486-

>mRNA_8496 ID=mRNA_8496|Name=jgi.p|Trimin1|350650|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=3621bp|location=Sequence derived from alignment at Contig_68:378267..387486- (Tribonema minus UTEX_B_3156 )
ATGAACGACTTTGAGGAGCCGTACGACTTTCCGGAGGAGGAGCAGGAGGA
ACCGGATTGGCTTGGCTACGATGAAGAGGCTCAGGCGGCTATGCACGAGG
ACGAGCCGCCGCCGCCGCCGCCGGAGAGCCCCGACGGCGGCAAGCGGCAG
CAGACGCTCTCTTTCGTCAGCGCCTCGCAGCAGCAGCACACCAAAACTGG
GCGTGCCGATAGCCCCCGCCGAGCCGCGGCGATGCCACCGCTCAAGCTGT
ACGACCGCGCATCCGACGACGAGAACGCGCAGGCGCCGCCGCAGCGGCGC
CGCCCGCTGGCGCCCTCCGCCGCGGGCGTCAACGGCACCGGCACGAGCAC
CAGCAGCAGCAGCAGCAGCGGCAGCAGCGGCGCTGCGCTGAAGAGCGCGT
TCGCGACGACAAAGCTGGACATGGACGCGCCAGCAGCGCTCGGCGGATGG
CGCGCCAAGCGCGCGCGCACCGGCGACGCGAGGCATGCGCAGCACCACCC
GCAGCAGTCGGCGTCGCTGGCGCTGCTGCACGCGCGCCGCCTGCTGCGCG
CGCCCGCCGACGGCGGCGCCGGAGCCGGGACGCAGGAAAGCGAGCTGGTC
ACCCAGGCGCCGCTGTTCCGCGCCGCGCGCGACCGCAGCGCCGTGCTGGC
GCGCCCTCCGCTTGCCACCGGCGGCGGCGGCGACGGCGTTGGCGGCGACG
GCGGCGGCGGCGACGGCGGCAGCGGCGCAAGCGCGGCGGCAGGCGACGAC
TTTGTAGAGGTGCTGACGGGCAGCGGCGCCAAGGCATTTCTGCGCGCGCT
GCGCCCTGCGGAGTCGGCGGCTGTTCTGGCGGCGTGCCAGCGCGCGCAGC
GCAGCGGCGGCGGCGGCAGCGGCTTGCTTGAGTGCCCCATGGAGACGCTG
ATGGCGCGCGCAGAGCGGCGGCAGGTCGAGCGCCTGCACCGCAAGACCAT
GGTCGCGGCGGACGCCGCTGCCAAGGCGCCCGCCGCCGCCGCAGCAGCAT
CAGCAGCGGCAGCAGCGGGTGAAGATGGCGCGAGTGACCTTCAAGACGGC
GCAGAGACCGCAGGTGCTGCGAGCGGGGGGTCAGCGGCGAGCCCGAACCG
GCGAGACGCTGCGGCGGCGGCGGCGGCGGCGGCAGCAGCGGCGGCGCAGG
CGCGCCTCTGGGTGGACAAGTATGCGCCCACCAACTTTGCGCAGCTGCTC
AGCGACGAGCGCACGAACCGCGAGGTGCTGCGCGCCATCAAGGCGTGGGA
CGCGTTTGTGTTCCCCGCCGCCGCGGCCGCGTCCGCAGCCGCTGCCGCAG
CGCGCGAGGGCGCCACCTCCGCTGCCGCCAGCGCCAACGCCCGCGGCAAG
GGCGGTGCCAGCGGCGGTGGCGGCGGCAGCGGCGGCGGCGGCGGCGGTGG
AGCATTCCGCGGCAAAGGTGGCCGGGGTAGTGGAGACCAGGGAGGGGGGG
CGGCTGGGGGGCGTGGGGGGGGCGCAGCGGCGGCGGCAGCGGCGAAACCG
AAGGGGGCGGGGGGCGCGGAGGGGGGGCGCGTCGACAGGCGGCCGGAGAG
CAAGATCCTGCTGCTGTGCGGGCCGCCGGGGATGGGGAAGACGACGCTGG
CGCACATCGTCGCGCAGCAGGCGGGGTACCGGCCGCTGGAGATCAACGCC
AGCGATGACCGCACGGCGTCAGTGCTGACGGACAAGGCACCGCTGGAGAT
CAACGCCAGCGACGACCGCACGGCGTCGGTGCTGACGGACAAGGTTGTGC
GTGCCATGGAGAACCGCGCCCTGTTTGGCGACCAGCGCCCCAACCTCATC
ATCCTTGATGAGATTGACGGAGCGGAGGACAAGGCTGCTATAGACGCCAT
CCTTGCGATGGCGCACGCGCCGCTGCCGCCACTGCGCGGCGCCGCGGGCG
CTGCTGCCGCCTGCGGCAAGAAGAAGGGCTCCCGAGGCGGCGGCGGCGCG
CGCGGCGGCGGCGGCGGCGGCGGCACGCACCCCCTCACCCGCCCCCTCAT
CCTCATCTGCAATAACCAGTACGCGCCGCACCTGCGCGCGCTGCGCCCGG
AGGCGGCGGTGTTCAGCTTCCGGCGCGCGTCGCCGCAGCGCCTGGCGCGG
CGGCTGCGCGTCATCTGTGCCGCCGAGGCCATCACCGCCAGTCAGCCATC
GCTGCTGGCGCTGTGCGAGAGCACCGGCAACGACGTGCGCGCGTGCCTCA
ACACGCTGCAGTTCGTGGCGCACCGCACGCGCCAGGCGCAGCGGCCGCTA
CAGGCTAGCGGCGGGGGGCGCGTGCACGATGTCTCCATGGCGCTCGTGGC
AGCGCTCACCACCGGCATGAAGGACGAGCGCCGCGACATTTTCCAGGTGT
GGAACGCCGTGTTCACGGCCCCAAAGAGCGGCGCGGGCGGCGGCATGCGC
GCCGCCGCACTGGCCGCAGCAGCGCACACTGCCGCTGCCGCCGCTGCCGA
CGCCCCCGGCCGCACCGCCGGTCGCGGCGGCGCAGCAGCGCTCGACCTCA
AAGACGATGACGCGCCGAGCGGCGCCGCGGCGGTGCAGCGGCAGCTGGAA
CAGTTCAACGACCATCGGCGCGTGCTCGATGGCGTGCACGAGTGCTACCT
GCAGGCCAAGTACAGCGACCCGTCGCTGCGGCGCTCCGTCGCCGCAGCGG
ACTGGCTCGCGTACGCCGACACCCTCGAGGCGTGCGTCGTCGGCGGCTCC
GAGCACTACGCGCTGCGCCGCTACCTGCCCGCCGCCGCCGCCGGCGTGCA
CGTGCAAGTGCGCTGCGACGCGCGGCCGCCGGCGCCGCGCCTCGCCAGCG
CGCTCGCCGCGACGGCGGCGGCGCGAGAGGCGCGCAGCGCCGCGCTGCGC
GCCTTCGACGCCGGCCGGCACCCCGCCTCGAGCGGCCGCGGCGGCGGCGC
GGCGGCGACGGAGGTGGCGCCGCTGTGCGCGCGCGCCATGCTCCTCGCGC
CGCGCCTCCGCTGCGTGCCGCTCGAGCTGCTGCGCGGCGCCGAGCGGCAG
CGCCTCGCCGACCTCGTGTCAGCGCTCATCGCGTGCGGCGCGACCGGCAC
CGTCGCCGGCCGCAGCGGCGGCGGCGGCGGCGGCGACGCGGACGAGTGGG
TGCTAGAGCCGCCTATCGACGCGCTGACCGTGTTTGAGGGGCAGCCGCTG
TCGTACGCGCCGCTGGCGGGGCCGATGCGGCAGCTCGTCGCACACGAGGT
GGAGATGGAGCGGGTGCGGCGGCAGAGCGCGAGCAGGGGCAACGCCGACG
GCGCCGCCGCCGCTCCCGAAGACAAAGACGACTCTTCGCAGCAGCGCGCC
GCACCCGCCGCCGCCGAAGCGCGCCACGCGTCTTTCAAGCGCGCGCCGCC
CGCCCCCGTGCACGAGACCGCGGAGCAGGAGCAGAAGCGCCAGCGCATGG
ACGCAGCGCGCGCCGCCGTTGTGCCGTTCTGGCACAAGGCGGGGGCCAGG
GGGACGCGCGGGGGGGCGCAAGGGGGGGTACAGGGGGGGAAGGGGGAGGG
GGGGGGGGGAGGGGGGGCGCAGGCGGCGGGGGCGGCGGCGGCGGCGCCGC
TGCGGTTCAAGTATCAGGCGGGGTACACAAATGCTGTGCGGCGGCCGGTG
CGCATGAAGGATCTGCTATAG
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