mRNA_8447 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|169939
Unique NamemRNA_8447
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
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BLAST of jgi.p|Trimin1|169939 vs. uniprot
Match: A0A836C925_9STRA (Cytochrome b5 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C925_9STRA)

HSP 1 Score: 477 bits (1227), Expect = 2.020e-170
Identity = 230/230 (100.00%), Postives = 230/230 (100.00%), Query Frame = 1 
Query:    1 MEQPGELAAAVLRYFTPEDVAQHNCAEDCWVSAGHRVLDLTALIEEHRGPLAEPIIAAAGSDISHWFNPKTGDPKTCIDPVTGLTVAYTPSGRFIHVPPNFPTTAWRTDFGAPWWQDARYVVGTLTARARMVRIVNVLTQQEDELLVSCEDTVASIQRRYEERNAHAGSYTWKALSSGSQDAKFVPMDMEKTLEENGVVDDSDAFGKLGADADCSAPVLHIYFNDDLTVA 690
            MEQPGELAAAVLRYFTPEDVAQHNCAEDCWVSAGHRVLDLTALIEEHRGPLAEPIIAAAGSDISHWFNPKTGDPKTCIDPVTGLTVAYTPSGRFIHVPPNFPTTAWRTDFGAPWWQDARYVVGTLTARARMVRIVNVLTQQEDELLVSCEDTVASIQRRYEERNAHAGSYTWKALSSGSQDAKFVPMDMEKTLEENGVVDDSDAFGKLGADADCSAPVLHIYFNDDLTVA
Sbjct:    1 MEQPGELAAAVLRYFTPEDVAQHNCAEDCWVSAGHRVLDLTALIEEHRGPLAEPIIAAAGSDISHWFNPKTGDPKTCIDPVTGLTVAYTPSGRFIHVPPNFPTTAWRTDFGAPWWQDARYVVGTLTARARMVRIVNVLTQQEDELLVSCEDTVASIQRRYEERNAHAGSYTWKALSSGSQDAKFVPMDMEKTLEENGVVDDSDAFGKLGADADCSAPVLHIYFNDDLTVA 230
[Close]
BLAST of jgi.p|Trimin1|169939 vs. uniprot
Match: D7FS97_ECTSI (Cytochrome b5 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS97_ECTSI)

HSP 1 Score: 279 bits (714), Expect = 1.320e-91
Identity = 144/263 (54.75%), Postives = 173/263 (65.78%), Query Frame = 1 
Query:   37 RYFTPEDVAQHNCAEDCWVSAGHRVLDLTALIEEHRGPLAEPIIAAAGSDISHWFN---------PK-----------------------------------TGDPKTCIDPVTGLTVAYTPSGRFIHVPPNFPTTAWRTDFGAPWWQDARYVVGT-LTARARMVRIVNVLTQQEDELLVSCEDTVASIQRRYEERNAHAGSYTWKALSSGSQDAKFVPMDMEKTLEENGVVDDSDAFGKLGADADCSAPVLHIYFNDDLTVA 690
            R++TP+DVA HNCAEDCW+S   +VLDLT LI  +RGPLA+P+IAAAG+D+SHWF+         PK                                     DP+T +DP TGLT  Y P GRF+HVPPNFPTT W T FG PWW+D + VVG  LT +AR +R+VN+L++QED+LLV+CEDT+A IQ RY E NAHA SYTWK L    QD KFVP  M++TLEENG+VDD  AF KLG D D   PVLHIYFNDDLT+A
Sbjct:   19 RFYTPDDVALHNCAEDCWLSLFGQVLDLTELILANRGPLADPLIAAAGTDVSHWFHLPPPPDVKKPKPRGIGGSDKSSNKALSTKIVKEGDDGNGRLEECENASDPRTFVDPQTGLTTPYLPMGRFLHVPPNFPTTKWSTSFGLPWWRDRKRVVGKKLTRKARPLRVVNILSRQEDQLLVACEDTIADIQERYLEYNAHAASYTWKVL----QDEKFVPAKMDQTLEENGIVDDDLAFEKLGIDDDGYMPVLHIYFNDDLTIA 277
[Close]
BLAST of jgi.p|Trimin1|169939 vs. uniprot
Match: A0A7S2F938_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2F938_9STRA)

HSP 1 Score: 266 bits (680), Expect = 2.700e-87
Identity = 130/219 (59.36%), Postives = 157/219 (71.69%), Query Frame = 1 
Query:   28 AVLRYFTPEDVAQHNCAEDCWVSAGHRVLDLTALIEEHRGPLAEPIIAAAGSDISHWFNPKTGDPKTCIDPVTGLTVAYTPSGRFIHVPPNFPTTAWRTDFGAPWWQDARYVVGTLTARARMVRIVNVLTQQEDELLVSCEDTVASIQRRYEERNAHAGSYTWKALSSGSQDAKFVPMDMEKTLEENGVVDDSDAFGKLGADADCSAPVLHIYFNDDLT 684
            A  R++TPED+A HNCA+D WVS  ++V DLT LI+ +RGPLA+P+I  AG DISHWF+ KTG  KT +DP  G+ V YTP GRF+HVPP  PT AW TDFG  WW D   ++G LT + R V+IVNVLT Q D L V  E+T+  I+ RY E N HA SYTWK L    +DA FVPMDMEKTL+ENGV D+S+ F KLG D D   PV+H+YFNDDLT
Sbjct:    2 AKRRFYTPEDLAAHNCAKDIWVSINYKVFDLTELIQANRGPLAQPLIEVAGQDISHWFDSKTGGVKTFMDPSRGVRVPYTPHGRFLHVPPPEPTAAWNTDFGTAWWLDEDLIIGRLTEKTRKVQIVNVLTHQTDLLTVCSEETLEEIRDRYMEYNKHAQSYTWKKLE---EDA-FVPMDMEKTLDENGVPDESEEFDKLGIDFDYYYPVIHVYFNDDLT 216
[Close]
BLAST of jgi.p|Trimin1|169939 vs. uniprot
Match: A0A7S2WHL5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WHL5_9STRA)

HSP 1 Score: 258 bits (660), Expect = 7.720e-84
Identity = 131/237 (55.27%), Postives = 159/237 (67.09%), Query Frame = 1 
Query:    4 EQPGELAAAVL--------RYFTPEDVAQHNCAEDCWVSAGHRVLDLTALIEEHRGPLAEPIIAAAGSDISHWFNPKTGDPKTCIDPVTGLTVAYTPSGRFIHVPPNFPTTAWRTDFGAPWWQDARYVVGTLTARARMVRIVNVLTQQEDELLVSCEDTVASIQRRYEERNAHAGSYTWKALSSGSQDAKFVPMDMEKTLEENGVVDDSDAFGKLGADADCSAPVLHIYFNDDLTVA 690
            E PG    A L        RY+TPE+VA HN A D WVS  HRVL+LT L+ EHRG L  P+I AAG DISHWF+ KTG+ KT IDP  G+ + YTP GRF+HV P  PT  W T    PWWQD   V+G LT + R V+IVNV++QQ D L V  E+T++ I+ RY E N HA SYTWK L+ G+    FV +DMEKTL ENGVVD+S+ F +LG + D   P+LH+YFNDDLTVA
Sbjct:   15 EDPGARLLAGLCVDSMETRRYYTPEEVAAHNSAGDLWVSVFHRVLNLTDLVREHRGELTVPLIEAAGQDISHWFDEKTGNVKTRIDPGKGIRLPYTPQGRFLHVAPAEPTANWSTKIANPWWQDENLVIGKLTQKTRKVQIVNVISQQTDLLTVCSEETISEIRDRYMEYNRHASSYTWKKLAQGT----FVLLDMEKTLAENGVVDESEEFEELGIEDDFYYPILHVYFNDDLTVA 247
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BLAST of jgi.p|Trimin1|169939 vs. uniprot
Match: A0A7S2F2A0_9DINO (Hypothetical protein n=1 Tax=Alexandrium andersonii TaxID=327968 RepID=A0A7S2F2A0_9DINO)

HSP 1 Score: 252 bits (643), Expect = 1.680e-81
Identity = 118/220 (53.64%), Postives = 154/220 (70.00%), Query Frame = 1 
Query:   31 VLRYFTPEDVAQHNCAEDCWVSAGHRVLDLTALIEEHRGPLAEPIIAAAGSDISHWFNPKTGDPKTCIDPVTGLTVAYTPSGRFIHVPPNFPTTAWRTDFGAPWWQDARYVVGTLTARARMVRIVNVLTQQEDELLVSCEDTVASIQRRYEERNAHAGSYTWKALSSGSQDAKFVPMDMEKTLEENGVVDDSDAFGKLGADADCSAPVLHIYFNDDLTVA 690
            + RY+TP D+A+HN   DCWVS  + V DLT L+ E++GPLA+PII AAG+DISHWF+  TG PK  IDP TGL   Y P GR+IHVPP  P + W T++  PWW+D RY +G  + R R V +VN++T+Q++ L V  E+TVA IQ RYE  NAHAGSYTWK L         +P++M+K LEENG+ D+++ F +LG D D   PV+H+YFNDDLT A
Sbjct:   19 IRRYYTPADIAKHNLEHDCWVSYFNHVYDLTPLLAEYKGPLAQPIIDAAGTDISHWFDSVTGQPKMHIDPTTGLEEIYCPWGRYIHVPPQGPESNWATNYQTPWWEDRRYFIGKSSKRTRKVAVVNLMTKQKNTLEVPVEETVAEIQERYEVFNAHAGSYTWKRLG--------IPLNMDKNLEENGMKDETEQFMRLGVDPDDHIPVIHLYFNDDLTEA 230
[Close]
BLAST of jgi.p|Trimin1|169939 vs. uniprot
Match: A0A8K1CLP1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CLP1_PYTOL)

HSP 1 Score: 249 bits (636), Expect = 2.690e-80
Identity = 122/230 (53.04%), Postives = 153/230 (66.52%), Query Frame = 1 
Query:    1 MEQPGELAAAVLRYFTPEDVAQHNCAEDCWVSAGHRVLDLTALIEEHRGPLAEPIIAAAGSDISHWFNPKTGDPKTCIDPVTGLTVAYTPSGRFIHVPPNFPTTAWRTDFGAPWWQDARYVVGTLTARARMVRIVNVLTQQEDELLVSCEDTVASIQRRYEERNAHAGSYTWKALSSGSQDAKFVPMDMEKTLEENGVVDDSDAFGKLGADADCSAPVLHIYFNDDLTVA 690
            +E+P       LRY+TP +VA HN  EDCWVS  HR+LDL+ LI+EHRG L +P+I  AG DISHWF+P T D +  +D    + + + P GRF++VPP  PT+ W T    PWW+DA+YVVG LT + R + IVNVLTQQ   L V CE+T+  IQ RY   NAHA SYTWK L     D  FVP++M++TLEENG+ D+S  F KL  D     P L+IYFNDDLTVA
Sbjct:   15 VEKPVSTRTRALRYYTPREVAMHNTGEDCWVSIFHRILDLSELIQEHRGLLTQPLILHAGEDISHWFDPATQDVRKHVDAGRNVELPFLPYGRFLNVPPPEPTSNWSTTDAVPWWKDAKYVVGKLTTKVRWIEIVNVLTQQHHALEVCCEETIEEIQARYLRFNAHARSYTWKYLD----DDDFVPLNMKQTLEENGIPDESPLFEKLDMDEQQYKPSLYIYFNDDLTVA 240
[Close]
BLAST of jgi.p|Trimin1|169939 vs. uniprot
Match: A0A6A3YCI2_9STRA (Cytochrome b5 heme-binding domain-containing protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3YCI2_9STRA)

HSP 1 Score: 249 bits (635), Expect = 3.030e-80
Identity = 122/217 (56.22%), Postives = 150/217 (69.12%), Query Frame = 1 
Query:   37 RYFTPEDVAQHNCAEDCWVSAGHRVLDLTALIEEHRGPLAEPIIAAAGSDISHWFNPKTGDPKTCIDPVTGLTVAYTPSGRFIHVPPNFPTTAWRTDFGAPWWQDARYVVGTLTARARMVRIVNVLTQQEDELLVSCEDTVASIQRRYEERNAHAGSYTWKALSSGSQDAKFVPMDMEKTLEENGVVDDSDAFGKLGADADCSAPVLHIYFNDDLTV 687
            R+FTP +VA HN A DCWVS  HRVLDL+ LIEE+ G L +P++  AG DISHWF+  T D K  IDP   L+V +TP GRF+HVPP  PT  WRT    PWW+D +YVVG LT +AR + IVNVLTQQ   L V CE+T+A IQ RY   NAHAGSYTWK L    +D +FVP+ M++TL+ENG+ D+S  F +   D     P LHIYF+DDLT+
Sbjct:   20 RFFTPREVATHNLATDCWVSINHRVLDLSRLIEENPGVLVQPLVLHAGEDISHWFDADTEDVKYHIDPDRNLSVPFTPYGRFLHVPPPDPTAQWRTADLLPWWRDPQYVVGRLTKKARWLEIVNVLTQQSHSLEVCCEETLAEIQSRYLRLNAHAGSYTWKHL----EDDEFVPLHMQRTLDENGIPDESPIFERFDMDEQQFKPTLHIYFDDDLTI 232
[Close]
BLAST of jgi.p|Trimin1|169939 vs. uniprot
Match: A0A3R7JSH1_9STRA (Cytochrome b5 heme-binding domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7JSH1_9STRA)

HSP 1 Score: 248 bits (634), Expect = 3.640e-80
Identity = 118/224 (52.68%), Postives = 156/224 (69.64%), Query Frame = 1 
Query:   13 GELAAAVLRYFTPEDVAQHNCAEDCWVSAGHRVLDLTALIEEHRGPLAEPIIAAAGSDISHWFNPKTGDPKTCIDPVTGLTVAYTPSGRFIHVPPNFPTTAWRTDFGAPWWQDARYVVGTLTARARMVRIVNVLTQQEDELLVSCEDTVASIQRRYEERNAHAGSYTWKALSSGSQDAKFVPMDMEKTLEENGVVDDSDAFGKLGADADCSAPVLHIYFNDDLT 684
            G+ A    ++FTP +V+ HN AEDCWVS  HRVLD+++LI+E+RGPL +P+I  AG DISHWF+P T + K  +DP   L++ + P GRF+HVPP  PT  WRT    PWW+D +Y+VG LT + R + IVNVLTQQ+  L V CE+T+A IQ RY   NAHAGSYTWK L    +D +FVP+ M++TL+ENG+ D+S  F +   D     P LH+YF+DDLT
Sbjct:    7 GDSAQRRPQFFTPREVSIHNLAEDCWVSINHRVLDVSSLIQENRGPLVQPLIHHAGEDISHWFDPNTENVKHHVDPERNLSLPFLPYGRFLHVPPPDPTAQWRTADFLPWWRDPQYIVGRLTKKVRWLEIVNVLTQQQHSLEVCCEETLAEIQTRYLRVNAHAGSYTWKHL----EDDEFVPLYMQRTLDENGIPDESPTFERFDMDEQQFKPTLHLYFDDDLT 226
[Close]
BLAST of jgi.p|Trimin1|169939 vs. uniprot
Match: A0A7S2C328_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2C328_9STRA)

HSP 1 Score: 247 bits (630), Expect = 1.430e-79
Identity = 123/230 (53.48%), Postives = 156/230 (67.83%), Query Frame = 1 
Query:    1 MEQPGELAAAVLRYFTPEDVAQHNCAEDCWVSAGHRVLDLTALIEEHRGPLAEPIIAAAGSDISHWFNPKTGDPKTCIDPVTGLTVAYTPSGRFIHVPPNFPTTAWRTDFGAPWWQDARYVVGTLTARARMVRIVNVLTQQEDELLVSCEDTVASIQRRYEERNAHAGSYTWKALSSGSQDAKFVPMDMEKTLEENGVVDDSDAFGKLGADADCSAPVLHIYFNDDLTVA 690
            M Q   +A+   RY+TP DVA HN A DC VS  HRV DLT LI +++GPLA+P++  AG DISHWF       KT IDP  G+T+ YTP GRFI VPP+ PT +W T FG PWWQ+   +VG L+ + R + IVNVLTQQ+D L V  E+T+  I+ RY E N HA SYTWK L  G    KFV M+M+KTL+ENGV+D+SD F +L  D D   P++H+YF D+LT+A
Sbjct:    3 MAQKARIASR-RRYYTPGDVAAHNSATDCLVSIFHRVFDLTDLIRDNQGPLAQPLVEVAGQDISHWFTNNPVQCKTYIDPDRGMTLPYTPHGRFIDVPPSEPTASWSTSFGIPWWQNEDIIVGRLSEKTRKIMIVNVLTQQKDVLEVCSEETMLEIRDRYMEYNKHAESYTWKKLHEG----KFVVMNMQKTLDENGVIDESDDFEELEIDEDFYYPIIHVYFEDNLTIA 227
[Close]
BLAST of jgi.p|Trimin1|169939 vs. uniprot
Match: A0A1V9Z4R5_9STRA (Cytochrome b5-like protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z4R5_9STRA)

HSP 1 Score: 246 bits (628), Expect = 2.780e-79
Identity = 115/219 (52.51%), Postives = 152/219 (69.41%), Query Frame = 1 
Query:   37 RYFTPEDVAQHNCAEDCWVSAGHRVLDLTALIEEHRGPLAEPIIAAAGSDISHWFNPKTGDPKTCIDPVTGLTVAYTPSGRFIHVPPNFPTTAWRTDFGAPWWQDARYVVGTLTARARMVRIVNVLTQQEDELLVSCEDTVASIQRRYEER--NAHAGSYTWKALSSGSQDAKFVPMDMEKTLEENGVVDDSDAFGKLGADADCSAPVLHIYFNDDLTV 687
            RY+TPE+VA H CA+DCWV    RVLD++ L+ +HRG L +P++  AG DI+HWFNP+T + KT IDP   + + + P GRF+HVPP  P T W T    PWW D +YV+G +TA+ RM++IVN LT Q   + V  E+T+A IQ+RY +   NAHAGSYTWK L       +F+P+DM+K+L ENGV D+S  F KL  DAD   P+LHIY+NDDLT+
Sbjct:   11 RYYTPEEVAIHKCADDCWVVVFSRVLDISGLVAQHRGKLTQPLVQHAGEDITHWFNPETREVKTHIDPERNIRLPFLPYGRFLHVPPPEPVTDWNTLELTPWWTDEQYVIGLITAKVRMIQIVNTLTHQSHSIQVCSEETIAEIQKRYVDLQYNAHAGSYTWKYLDGN----EFIPLDMDKSLAENGVEDESLEFEKLNLDADDYQPILHIYYNDDLTI 225
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|169939 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836C925_9STRA2.020e-170100.00Cytochrome b5 n=1 Tax=Tribonema minus TaxID=303371... [more]
D7FS97_ECTSI1.320e-9154.75Cytochrome b5 n=1 Tax=Ectocarpus siliculosus TaxID... [more]
A0A7S2F938_9STRA2.700e-8759.36Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S2WHL5_9STRA7.720e-8455.27Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2F2A0_9DINO1.680e-8153.64Hypothetical protein n=1 Tax=Alexandrium andersoni... [more]
A0A8K1CLP1_PYTOL2.690e-8053.04Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A6A3YCI2_9STRA3.030e-8056.22Cytochrome b5 heme-binding domain-containing prote... [more]
A0A3R7JSH1_9STRA3.640e-8052.68Cytochrome b5 heme-binding domain-containing prote... [more]
A0A7S2C328_9STRA1.430e-7953.48Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A1V9Z4R5_9STRA2.780e-7952.51Cytochrome b5-like protein n=1 Tax=Achlya hypogyna... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_68contigContig_68:11215..11907 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|169939|e_gw1.68.18.1
BRITEko00000,ko00001,ko01000,ko03036,ko04131,ko04812
KEGG Pathwayko04062,ko04144,ko04520,ko04530,ko04666,ko04810,ko05100,ko05130,ko05131,ko05132,ko05231,map04062,map04144,map04520,map04530,map04666,map04810,map05100,map05130,map05131,map05132,map05231
KEGG koko:K05747,ko:K11448,ko:K11642
EC3.6.4.12
Preferred nameCYB5D1
Descriptionheme binding
COG categoryCI
Max annot lvl2759|Eukaryota
EggNOG OGsCOG5274@1|root,KOG0537@2759|Eukaryota
Evalue2.17e-92
Seed ortholog2880.D7FS97
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionCytochrome b5
Ec32 orthologEc-05_004830.1
TranscriptId170261
TrackFilteredModels1
ProteinId169939
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|169939gene_8447Tribonema minus UTEX_B_3156 geneContig_68 11215..11907 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_8447_1exon_8447_1Tribonema minus UTEX_B_3156 exonContig_68 11215..11907 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_8447CDS_8447Tribonema minus UTEX_B_3156 CDSContig_68 11215..11907 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|169939Trimin1|169939|e_gw1.68.18.1Tribonema minus UTEX_B_3156 polypeptideContig_68 11215..11907 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_8447 ID=mRNA_8447|Name=jgi.p|Trimin1|169939|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=693bp|location=Sequence derived from alignment at Contig_68:11215..11907- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGAGCAGCCAGGCGAGCTGGCAGCAGCTGTGCTAAGGTACTTTACCCC
TGAGGATGTAGCTCAGCATAATTGCGCCGAAGACTGCTGGGTGTCAGCAG
GCCACAGAGTGCTGGACCTGACTGCGCTTATTGAGGAGCACAGAGGCCCT
CTGGCGGAGCCTATCATAGCGGCAGCAGGTTCCGACATCTCTCACTGGTT
CAACCCAAAAACAGGAGATCCGAAGACCTGCATAGATCCAGTGACAGGCC
TCACGGTGGCCTACACACCCTCCGGTAGGTTCATCCACGTCCCACCAAAC
TTTCCAACGACGGCATGGAGGACCGACTTCGGGGCACCGTGGTGGCAAGA
CGCGCGTTACGTAGTTGGCACGCTCACAGCTCGTGCACGGATGGTGCGGA
TTGTCAACGTGCTCACTCAGCAAGAAGACGAGCTCCTGGTGTCTTGCGAG
GACACCGTGGCCAGCATACAGCGGCGATACGAGGAGAGGAACGCGCATGC
GGGGAGCTACACCTGGAAGGCGCTGTCCTCAGGCTCACAAGATGCGAAGT
TTGTCCCCATGGACATGGAGAAGACGCTGGAAGAGAACGGCGTCGTAGAT
GACTCGGACGCCTTCGGCAAGCTTGGCGCGGATGCTGACTGCTCCGCGCC
GGTGCTACACATTTACTTCAATGATGACCTGACCGTAGCATGA
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protein sequence of jgi.p|Trimin1|169939

>Trimin1|169939|e_gw1.68.18.1 ID=Trimin1|169939|e_gw1.68.18.1|Name=jgi.p|Trimin1|169939|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=231bp
MEQPGELAAAVLRYFTPEDVAQHNCAEDCWVSAGHRVLDLTALIEEHRGP
LAEPIIAAAGSDISHWFNPKTGDPKTCIDPVTGLTVAYTPSGRFIHVPPN
FPTTAWRTDFGAPWWQDARYVVGTLTARARMVRIVNVLTQQEDELLVSCE
DTVASIQRRYEERNAHAGSYTWKALSSGSQDAKFVPMDMEKTLEENGVVD
DSDAFGKLGADADCSAPVLHIYFNDDLTVA*
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mRNA from alignment at Contig_68:11215..11907-

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_8447 ID=mRNA_8447|Name=jgi.p|Trimin1|169939|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=693bp|location=Sequence derived from alignment at Contig_68:11215..11907- (Tribonema minus UTEX_B_3156 )
ATGGAGCAGCCAGGCGAGCTGGCAGCAGCTGTGCTAAGGTACTTTACCCC
TGAGGATGTAGCTCAGCATAATTGCGCCGAAGACTGCTGGGTGTCAGCAG
GCCACAGAGTGCTGGACCTGACTGCGCTTATTGAGGAGCACAGAGGCCCT
CTGGCGGAGCCTATCATAGCGGCAGCAGGTTCCGACATCTCTCACTGGTT
CAACCCAAAAACAGGAGATCCGAAGACCTGCATAGATCCAGTGACAGGCC
TCACGGTGGCCTACACACCCTCCGGTAGGTTCATCCACGTCCCACCAAAC
TTTCCAACGACGGCATGGAGGACCGACTTCGGGGCACCGTGGTGGCAAGA
CGCGCGTTACGTAGTTGGCACGCTCACAGCTCGTGCACGGATGGTGCGGA
TTGTCAACGTGCTCACTCAGCAAGAAGACGAGCTCCTGGTGTCTTGCGAG
GACACCGTGGCCAGCATACAGCGGCGATACGAGGAGAGGAACGCGCATGC
GGGGAGCTACACCTGGAAGGCGCTGTCCTCAGGCTCACAAGATGCGAAGT
TTGTCCCCATGGACATGGAGAAGACGCTGGAAGAGAACGGCGTCGTAGAT
GACTCGGACGCCTTCGGCAAGCTTGGCGCGGATGCTGACTGCTCCGCGCC
GGTGCTACACATTTACTTCAATGATGACCTGACCGTAGCATGA
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Coding sequence (CDS) from alignment at Contig_68:11215..11907-

>mRNA_8447 ID=mRNA_8447|Name=jgi.p|Trimin1|169939|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=693bp|location=Sequence derived from alignment at Contig_68:11215..11907- (Tribonema minus UTEX_B_3156 )
ATGGAGCAGCCAGGCGAGCTGGCAGCAGCTGTGCTAAGGTACTTTACCCC
TGAGGATGTAGCTCAGCATAATTGCGCCGAAGACTGCTGGGTGTCAGCAG
GCCACAGAGTGCTGGACCTGACTGCGCTTATTGAGGAGCACAGAGGCCCT
CTGGCGGAGCCTATCATAGCGGCAGCAGGTTCCGACATCTCTCACTGGTT
CAACCCAAAAACAGGAGATCCGAAGACCTGCATAGATCCAGTGACAGGCC
TCACGGTGGCCTACACACCCTCCGGTAGGTTCATCCACGTCCCACCAAAC
TTTCCAACGACGGCATGGAGGACCGACTTCGGGGCACCGTGGTGGCAAGA
CGCGCGTTACGTAGTTGGCACGCTCACAGCTCGTGCACGGATGGTGCGGA
TTGTCAACGTGCTCACTCAGCAAGAAGACGAGCTCCTGGTGTCTTGCGAG
GACACCGTGGCCAGCATACAGCGGCGATACGAGGAGAGGAACGCGCATGC
GGGGAGCTACACCTGGAAGGCGCTGTCCTCAGGCTCACAAGATGCGAAGT
TTGTCCCCATGGACATGGAGAAGACGCTGGAAGAGAACGGCGTCGTAGAT
GACTCGGACGCCTTCGGCAAGCTTGGCGCGGATGCTGACTGCTCCGCGCC
GGTGCTACACATTTACTTCAATGATGACCTGACCGTAGCATGA
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