mRNA_8391 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|132176
Unique NamemRNA_8391
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
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BLAST of jgi.p|Trimin1|132176 vs. uniprot
Match: A0A835YUE1_9STRA (Glycoside hydrolase superfamily (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUE1_9STRA)

HSP 1 Score: 456 bits (1172), Expect = 1.600e-162
Identity = 216/216 (100.00%), Postives = 216/216 (100.00%), Query Frame = 1 
Query:    1 IQGEFDDALRAFAQETTVRGRGFWVRTLHEFNGDWYPWGILYEYQGDRGNSRSQLRDAFAHVITLFREEGSPVKFQLDINANNGKADKRPFSAFWPGTDGLDAVSITSYNRAYSTPDHQYSESFAAGFADAYQQVSELTDLPIWVAETATSSSHTDKPAWILDAWESIALDFPRVVQVTWFLSNKVNEGYLTDWDLNTEADVRAFVDGFLLMRQLT 648
            IQGEFDDALRAFAQETTVRGRGFWVRTLHEFNGDWYPWGILYEYQGDRGNSRSQLRDAFAHVITLFREEGSPVKFQLDINANNGKADKRPFSAFWPGTDGLDAVSITSYNRAYSTPDHQYSESFAAGFADAYQQVSELTDLPIWVAETATSSSHTDKPAWILDAWESIALDFPRVVQVTWFLSNKVNEGYLTDWDLNTEADVRAFVDGFLLMRQLT
Sbjct:    1 IQGEFDDALRAFAQETTVRGRGFWVRTLHEFNGDWYPWGILYEYQGDRGNSRSQLRDAFAHVITLFREEGSPVKFQLDINANNGKADKRPFSAFWPGTDGLDAVSITSYNRAYSTPDHQYSESFAAGFADAYQQVSELTDLPIWVAETATSSSHTDKPAWILDAWESIALDFPRVVQVTWFLSNKVNEGYLTDWDLNTEADVRAFVDGFLLMRQLT 216
[Close]
BLAST of jgi.p|Trimin1|132176 vs. uniprot
Match: A0A836CDM6_9STRA (Glycoside hydrolase superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDM6_9STRA)

HSP 1 Score: 297 bits (760), Expect = 2.220e-98
Identity = 139/218 (63.76%), Postives = 170/218 (77.98%), Query Frame = 1 
Query:    1 IQGEFDDALRAFAQETTVRGRGFWVRTLHEFNGDWYPWGILYEYQ--GDRGNSRSQLRDAFAHVITLFREEGSPVKFQLDINANNGKADKRPFSAFWPGTDGLDAVSITSYNRAYSTPDHQYSESFAAGFADAYQQVSELTDLPIWVAETATSSSHTDKPAWILDAWESIALDFPRVVQVTWFLSNKVNEGYLTDWDLNTEADVRAFVDGFLLMRQLT 648
            + GEFD+ L  FAQE    G  F +RTLHEFNGDWYPWG+LY+    G   N+R+ L  AF HVI++FRE G+PV+FQL+INA NG  D RPFSAFWPGT GL++V+ITSYNRA+STP+HQY+ESF  GF   Y+QV+ LTDLPIWVAET T+S  TDKPAW++D + S+ALDFPRV QVT+F+ NK+NE  LTDWDLNTE D+ AFV G  L+R+LT
Sbjct:   87 LAGEFDEQLEEFAQEAAAGGIRFMIRTLHEFNGDWYPWGLLYDPDKIGVYANTRANLSLAFRHVISIFRENGAPVEFQLNINAQNGLDDPRPFSAFWPGTLGLESVAITSYNRAFSTPNHQYTESFYDGFHGPYKQVAALTDLPIWVAETGTTSYGTDKPAWLMDMFTSLALDFPRVRQVTFFMLNKINENVLTDWDLNTEVDINAFVQGVQLLRELT 304
[Close]
BLAST of jgi.p|Trimin1|132176 vs. uniprot
Match: A0A836CFD3_9STRA (Glycoside hydrolase superfamily (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFD3_9STRA)

HSP 1 Score: 285 bits (730), Expect = 5.900e-94
Identity = 137/218 (62.84%), Postives = 163/218 (74.77%), Query Frame = 1 
Query:    1 IQGEFDDALRAFAQETTVRGRGFWVRTLHEFNGDWYPWGILYE--YQGDRGNSRSQLRDAFAHVITLFREEGSPVKFQLDINANNGKADKRPFSAFWPGTDGLDAVSITSYNRAYSTPDHQYSESFAAGFADAYQQVSELTDLPIWVAETATSSSHTDKPAWILDAWESIALDFPRVVQVTWFLSNKVNEGYLTDWDLNTEADVRAFVDGFLLMRQLT 648
            IQGEFD  L +FA++    G  F +RTLHEFNGDWYPWG+LY+    G   N+++ L  AF HVI +FR  G+PVKFQL+IN NNG  D RPFS FWPGT GL++V+ITSYNRAYSTP HQYS SF  GF DAY QV+ LTDLPIWVAET T+S  TDKPAW+   + SIALDFPRV +VT+F+ NKVNEG  TDWDLNT  +V  F++GF  +R LT
Sbjct:   82 IQGEFDAQLHSFAEQAAQGGIHFMIRTLHEFNGDWYPWGLLYDPYNTGSYLNTKADLTLAFRHVINIFRAHGAPVKFQLNINGNNGLDDPRPFSDFWPGTVGLESVAITSYNRAYSTPAHQYSLSFYDGFYDAYTQVAALTDLPIWVAETGTTSYGTDKPAWLRQMFTSIALDFPRVTEVTFFMLNKVNEGVYTDWDLNTWEEVDGFIEGFRTLRALT 299
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BLAST of jgi.p|Trimin1|132176 vs. uniprot
Match: A0A835YT36_9STRA (Glycoside hydrolase superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YT36_9STRA)

HSP 1 Score: 252 bits (644), Expect = 1.750e-80
Identity = 121/218 (55.50%), Postives = 151/218 (69.27%), Query Frame = 1 
Query:    1 IQGEFDDALRAFAQETTVRGRGFWVRTLHEFNGDWYPWGILYEYQGDRG--NSRSQLRDAFAHVITLFREEGSPVKFQLDINANNGKADKRPFSAFWPGTDGLDAVSITSYNRAYSTPDHQYSESFAAGFADAYQQVSELTDLPIWVAETATSSSHTDKPAWILDAWESIALDFPRVVQVTWFLSNKVNEGYLTDWDLNTEADVRAFVDGFLLMRQLT 648
            + G FD  L +FAQ     GR F +RTLHEFNG+WY WG+LY         N+  QLR++F+ +I +F   G+P+ FQL+IN+NNG  D RPFS FWPGT GL +V+ITSYNRA+STP H +SESF  GF  +Y Q     +LP+WVAET T+S  TDKP W  DA+++IAL FPRV QVT+FL NKV EG   DWDLNT  D++ FVDG+  MR LT
Sbjct:  118 VAGLFDAPLASFAQVCAAAGRRFTIRTLHEFNGNWYQWGLLYNAHDPTADKNTVHQLRESFSRIIGIFEHHGAPIDFQLNINSNNGYDDPRPFSDFWPGTQGLSSVAITSYNRAFSTPAHNFSESFGEGFQASYYQA----NLPVWVAETGTTSYGTDKPDWYRDAFKTIALQFPRVEQVTFFLYNKVLEGKNLDWDLNTPEDIKGFVDGYYAMRSLT 331
[Close]
BLAST of jgi.p|Trimin1|132176 vs. uniprot
Match: A0A835Z228_9STRA (Glycoside hydrolase superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z228_9STRA)

HSP 1 Score: 222 bits (565), Expect = 2.470e-70
Identity = 103/179 (57.54%), Postives = 131/179 (73.18%), Query Frame = 1 
Query:   97 GDWYPWGILYEYQ--GDRGNSRSQLRDAFAHVITLFREEGSPVKFQLDINANNGKADKRPFSAFWPGTDGLDAVSITSYNRAYSTPDHQYSESFAAGFADAYQQVSELTDLPIWVAETATSSSHTDKPAWILDAWESIALDFPRVVQVTWFLSNKVNEGYLTDWDLNTEADVRAFVDGF 627
            GDWYPWG+LY  +  G   N+ + LR A   VI++FR  G+PV FQ+++N +NG  D RP +  WPG +GLDAV+ITSYNRA+STP+HQY+ SF  G    YQQV+ELT LPIW+AETAT+S  TDKPAW+   +  +A  FPRV QVT+FL NKV EG L DWDLNT  +V+AF+DG+
Sbjct:   12 GDWYPWGLLYRQRPNGVGANTVALLRQALQRVISIFRTRGAPVLFQMNLNDHNGFDDPRPMAELWPGDEGLDAVAITSYNRAFSTPNHQYTRSFRDGLTPMYQQVTELTKLPIWIAETATTSFGTDKPAWLRQMFNDVARAFPRVTQVTFFLYNKVVEGKLLDWDLNTPEEVQAFIDGY 190
[Close]
BLAST of jgi.p|Trimin1|132176 vs. uniprot
Match: A0A836CL01_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CL01_9STRA)

HSP 1 Score: 203 bits (517), Expect = 5.910e-63
Identity = 99/179 (55.31%), Postives = 125/179 (69.83%), Query Frame = 1 
Query:   97 GDWYPWGILYEYQGDRGNSRSQ-------LRDAFAHVITLFREEGSPVKFQLDINANNGKADKRPFSAFWPGTDGLDAVSITSYNRAYSTPDHQYSESFAAGFADAYQQVSELTDLPIWVAETATSSSHTDKPAWILDAWESIALDFPRVVQVTWFLSNKVNEGYLTDWDLNTEADVRA 612
            G+WY WGILY   G R N + Q       L+DAF  VI +F +  +PV+FQL+INANNG  DK PF+ +WPGT GL +V+IT+YNRA STP HQ S+ F   F+ AY QV  LT LPIWVAET T+S  TDKP W+ +A+  IAL FP+VVQVTWFL++K+ EG +TDWD++    V A
Sbjct:   14 GNWYQWGILY---GSRSNPKPQYPNTQTRLKDAFKRVIKIFTDNKAPVQFQLNINANNGYDDKTPFATWWPGTVGLSSVAITAYNRACSTPSHQDSKPFRDRFSAAYNQVKALTPLPIWVAETGTTSCKTDKPTWVKEAFRDIALLFPQVVQVTWFLTDKLQEGVVTDWDMHDGTKVSA 189
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BLAST of jgi.p|Trimin1|132176 vs. uniprot
Match: A0A2N0KHE4_9CHLR (GH26 domain-containing protein n=1 Tax=SAR202 cluster bacterium Casp-Chloro-G3 TaxID=1926605 RepID=A0A2N0KHE4_9CHLR)

HSP 1 Score: 194 bits (493), Expect = 1.270e-58
Identity = 93/211 (44.08%), Postives = 132/211 (62.56%), Query Frame = 1 
Query:    4 QGEFDDALRAFAQETTVRGRGFWVRTLHEFNGDWYPWGILYEYQGDRGNSRSQLRDAFAHVITLFREEGSPVKFQLDINANNGKADKRPFSAFWPGTDGLDAVSITSYNRAYSTPDHQYSESFAAGFADAYQQVSELTDLPIWVAETATSSSHTDKPAWILDAWESIALDFPRVVQVTWFLSNKVNEGYLTDWDLNTEADVRAFVDGFLLM 636
            +G +D+ L + A+      R  W+R LHEFNG+WY WG+LY      GN++S    A+ +++T F     PVKFQL+ N  NG+ D  PFS  +PG + +D V IT+YNRAY+   HQY  +F+  F DAY QV+ LT+ PI VAE +++S+  +KP WI +A+ S+  DFP+V QVTWF  N+       DWDLNT+ ++ AF  G  L+
Sbjct:   51 EGHYDEELDSLARAIEADNREIWLRPLHEFNGNWYNWGVLYP-----GNNKSDFAPAWRYLVTFFMNRDVPVKFQLNYNRFNGENDTTPFSEVYPGDEYVDMVVITTYNRAYTDEWHQYWRTFSEEFQDAYDQVTSLTNKPIGVAEMSSTSNGGNKPEWIEEAFRSLDDDFPQVEQVTWFFYNRPVGDLTWDWDLNTDEEIEAFKHGLSLI 256
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BLAST of jgi.p|Trimin1|132176 vs. uniprot
Match: A0A835YT60_9STRA (Glycoside hydrolase superfamily (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YT60_9STRA)

HSP 1 Score: 157 bits (398), Expect = 3.930e-44
Identity = 83/209 (39.71%), Postives = 116/209 (55.50%), Query Frame = 1 
Query:    1 IQGEFDDALRAFAQETTVRG-RGFWVRTLHEFNGDWYPWGILYEYQGDRGNSRSQLRDAFAHVITLFREEGSPVKFQLDINANNGKADKRPFSAFWPGTDGLDAVSITSYNRAYSTPDHQYSESFAAGFADAYQQVSELTD-LPIWVAETATSSSHTDKPAWILDAWESIALDFPRVVQVTWFLSNKVNEGYLTDWDLNTEADVRAFVD 621
            I G FD  L  F  +    G +  W+R LHEFNGDWYPWG   +     GN     + AF HV+ +FR  G+ VKFQL  N +N   D + F  ++PG D +D +  + YNRA    DH   +SF+  F+  Y +++ L    P+ VAET+++S   DK  WI DA++++   F RV Q  WFL NK       DWDLN++++  AF D
Sbjct:   70 IDGAFDGQLNGFIDDMMSHGNQQMWIRHLHEFNGDWYPWGTYRD-----GNDTDTFKRAFRHVVDVFRGRGANVKFQLAYNCDNPNDDGKSFHDWYPGGDVVDMILCSGYNRAGVDSDHTSWQSFSEVFSSGYYKMASLDGGKPLGVAETSSTSWGGDKAQWIRDAFDAVVNQFTRVEQCNWFLINKAG-----DWDLNSDSERHAFGD 268
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BLAST of jgi.p|Trimin1|132176 vs. uniprot
Match: A0A835Z8N1_9STRA (Glycoside hydrolase superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8N1_9STRA)

HSP 1 Score: 157 bits (398), Expect = 9.560e-43
Identity = 85/214 (39.72%), Postives = 118/214 (55.14%), Query Frame = 1 
Query:    7 GEFDDALRAFAQETTVRGRGFWVRTLHEFNGDWYPWGILYEYQGDRGNSRSQLRDAFAHVITLFREEGSPVKFQLDINANNGKADKRPFSAFWPGTDGLDAVSITSYNRAYSTPDHQYSESFAAGFADAYQQVSELTDLPIWVAETATSSSHTDKPAWILDAWESIALDFPRVVQVTWFLSNKVNEGYLTDWDLNTEADVRAFVDGFLLMRQLT 648
            G  D  L  FA +    GR F++R LHEFNGDWYPWGI Y       +  S  + A+ H++T+FR   +PV+FQ   N +N + DK PF  F+ G D +D V  + YN A   P+H  S +F     D Y Q++  T   + ++E +T+S   DKPAWI D W SIA  F R+  V WFL NK +     +WDLN   + +A+++G    R  T
Sbjct:  190 GGSDGVLSDFANKAKTDGRQFYIRPLHEFNGDWYPWGI-YVDGTLHTDLLSDFKAAYKHIVTIFRNAKAPVQFQQGYNNSNPRDDKTPFKNFYVGDDYVDMVCFSLYNFA-GIPNHS-SGTFTKLAGDFYNQMTLATSKDLCISEMSTTSYGVDKPAWIKDTWSSIANQFTRITTVNWFLENKPDG----NWDLNNGPEQQAWINGLNSFRSTT 396
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BLAST of jgi.p|Trimin1|132176 vs. uniprot
Match: A0A835YSW1_9STRA (Glycoside hydrolase superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSW1_9STRA)

HSP 1 Score: 156 bits (395), Expect = 1.740e-41
Identity = 87/209 (41.63%), Postives = 115/209 (55.02%), Query Frame = 1 
Query:    7 GEFDDALRAFAQETTVRGRGFWVRTLHEFNGDWYPWGILYEYQGDRGNSRSQLRDAFAHVITLFREEGSPVKFQLDINANNGKADKRPFSAFWPGTDGLDAVSITSYNRAYST-PDHQYSESFAAGFADAYQQVSELT-DLPIWVAETATSSSHTDKPAWILDAWESIALDFPRVVQVTWFLSNKVNEGYLTDWDLNTEADVRAFVDGF 627
            G++D  L+ F       GR  ++R LHEFNGDWYPWGI  E     GNS    + A+ HVIT+ R  G   K+QL  N  +  ++   FS F+ G D L  + +++YN A +  PD   S S A     AY Q        P+ +AE +T+S   DKP WI D W+S+A  F  V  + WFL NK N     DWDLNT ADV+A+VDG+
Sbjct:  313 GKYDGYLKKFGAFAKADGRLIYLRPLHEFNGDWYPWGIFRE-----GNSLDAFKAAYRHVITVLRATGGNFKYQLSYNVKSANSNPTKFSDFYVGDDYLQ-ICVSAYNMAGARYPD---SRSLATILGYAYAQFESFAPSKPLCLAEMSTTSYGGDKPLWITDTWKSLAYQFTAVTTINWFLENK-NVDVNVDWDLNTPADVKAWVDGY 511
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|132176 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YUE1_9STRA1.600e-162100.00Glycoside hydrolase superfamily (Fragment) n=1 Tax... [more]
A0A836CDM6_9STRA2.220e-9863.76Glycoside hydrolase superfamily n=1 Tax=Tribonema ... [more]
A0A836CFD3_9STRA5.900e-9462.84Glycoside hydrolase superfamily (Fragment) n=1 Tax... [more]
A0A835YT36_9STRA1.750e-8055.50Glycoside hydrolase superfamily n=1 Tax=Tribonema ... [more]
A0A835Z228_9STRA2.470e-7057.54Glycoside hydrolase superfamily n=1 Tax=Tribonema ... [more]
A0A836CL01_9STRA5.910e-6355.31Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A2N0KHE4_9CHLR1.270e-5844.08GH26 domain-containing protein n=1 Tax=SAR202 clus... [more]
A0A835YT60_9STRA3.930e-4439.71Glycoside hydrolase superfamily (Fragment) n=1 Tax... [more]
A0A835Z8N1_9STRA9.560e-4339.72Glycoside hydrolase superfamily n=1 Tax=Tribonema ... [more]
A0A835YSW1_9STRA1.740e-4141.63Glycoside hydrolase superfamily n=1 Tax=Tribonema ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_36contigContig_36:644803..650954 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|132176|gw1.36.3.1
CAZyGH5,GH9
BRITEko00000,ko00001,ko01000
KEGG ReactionR06200,R11307,R11308
KEGG Pathwayko00500,ko01100,map00500,map01100
KEGG koko:K01179
EC3.2.1.4
GOsGO:0003674,GO:0003824,GO:0004553,GO:0008810,GO:0016787,GO:0016798
Preferred namecelH
DescriptionBelongs to the glycosyl hydrolase 26 family
COG categoryG
Max annot lvl2|Bacteria
EggNOG OGsCOG4124@1|root,COG4124@2|Bacteria
Evalue6.85e-30
Seed ortholog59374.Fisuc_1266
Hectar predicted targeting categoryother localisation
TranscriptId132498
TrackFilteredModels1
ProteinId132176
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|132176gene_8391Tribonema minus UTEX_B_3156 geneContig_36 644803..650954 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|132176Trimin1|132176|gw1.36.3.1Tribonema minus UTEX_B_3156 polypeptideContig_36 644803..650954 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_8391_1exon_8391_1Tribonema minus UTEX_B_3156 exonContig_36 644803..644899 +
exon_8391_2exon_8391_2Tribonema minus UTEX_B_3156 exonContig_36 646633..646785 +
exon_8391_3exon_8391_3Tribonema minus UTEX_B_3156 exonContig_36 647807..647958 +
exon_8391_4exon_8391_4Tribonema minus UTEX_B_3156 exonContig_36 648871..648913 +
exon_8391_5exon_8391_5Tribonema minus UTEX_B_3156 exonContig_36 649460..649545 +
exon_8391_6exon_8391_6Tribonema minus UTEX_B_3156 exonContig_36 650122..650190 +
exon_8391_7exon_8391_7Tribonema minus UTEX_B_3156 exonContig_36 650907..650954 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_8391CDS_8391Tribonema minus UTEX_B_3156 CDSContig_36 644803..644899 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_8391 ID=mRNA_8391|Name=jgi.p|Trimin1|132176|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=648bp|location=Sequence derived from alignment at Contig_36:644803..650954+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATACAGGGCGAGTTTGATGATGCGTTGAGGGCGTTTGCGCAGGAGACGAC
GGTACGCGGCCGCGGCTTCTGGGTGCGCACGCTGCACGAGTTCAACGGCG
ACTGGTACCCGTGGGGTATCCTGTACGAGTACCAGGGCGACAGGGGCAAT
TCGCGCAGCCAGCTGCGTGACGCATTTGCGCACGTCATCACATTGTTCCG
CGAGGAGGGCTCGCCCGTTAAGTTCCAGCTCGACATCAACGCGAACAACG
GCAAGGCCGACAAGCGGCCATTCAGCGCCTTCTGGCCTGGCACAGATGGC
CTGGATGCAGTGTCCATCACCTCCTACAACAGGGCCTACTCCACTCCTGA
CCACCAGTACTCGGAGTCCTTCGCAGCCGGGTTTGCAGATGCATACCAGC
AGGTTTCTGAGCTCACCGACCTGCCTATCTGGGTGGCTGAGACAGCCACC
TCATCCTCCCACACCGACAAGCCTGCATGGATCCTGGATGCGTGGGAGTC
CATTGCCCTGGACTTTCCCCGCGTGGTCCAGGTGACATGGTTCCTCAGCA
ACAAGGTCAATGAGGGCTACCTCACCGACTGGGACCTCAACACTGAAGCG
GATGTCCGCGCCTTTGTGGACGGCTTCCTGCTCATGCGTCAACTCACC
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protein sequence of jgi.p|Trimin1|132176

>Trimin1|132176|gw1.36.3.1 ID=Trimin1|132176|gw1.36.3.1|Name=jgi.p|Trimin1|132176|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=216bp
IQGEFDDALRAFAQETTVRGRGFWVRTLHEFNGDWYPWGILYEYQGDRGN
SRSQLRDAFAHVITLFREEGSPVKFQLDINANNGKADKRPFSAFWPGTDG
LDAVSITSYNRAYSTPDHQYSESFAAGFADAYQQVSELTDLPIWVAETAT
SSSHTDKPAWILDAWESIALDFPRVVQVTWFLSNKVNEGYLTDWDLNTEA
DVRAFVDGFLLMRQLT
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mRNA from alignment at Contig_36:644803..650954+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_8391 ID=mRNA_8391|Name=jgi.p|Trimin1|132176|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=6152bp|location=Sequence derived from alignment at Contig_36:644803..650954+ (Tribonema minus UTEX_B_3156 )
ATACAGGGCGAGTTTGATGATGCGTTGAGGGCGTTTGCGCAGGAGACGAC
GGTACGCGGCCGCGGCTTCTGGGTGCGCACGCTGCACGAGTTCAACGGTG
AGTGATGCTGAGCACTGCTGGTTGATTGGAAAGTTGCTGACTGTTTCATG
AATGTGGTCCGTGTATTTCTCGAAAGTATAGGGAATGCGTGCATGCGGCA
GCAAACATGTGTTTGTTTCACCGCGGCTTCTGGGTGCGCACGCTGCACGA
ATTTAATGGTGAGTGGTGCTGGGTGATGCTTATTATAGTTATAAAAAGTG
GTCCGTGTACTGCTGTGAGGTATAGCGATGCGTTTGCGCAGGAGACGACG
GTGCGCGGCCGCGGCTGCCGGGTGTGCGCGCTGCATGAGTTCAACAGGGA
GAGATGCTGATTGATAAATGCGGTTCATGTAGGTACTATGGGGATGCGTG
CGACAATGTGCGTGTGATTACTGAGGGGTGTGGGTGAGAAAAGGTGCATG
AATTCAATGGTGAGCCATGCGGAGCACTGCTGATTATTTAAAAAGCGGTG
CGTGTACTACTCCGAAGTATGGACGATGCGTGCGTGCGACAGCATACGCG
TGTTTTACTGAGGGTTGTGGGCGCACACGCTGCACAAGTTCTCCGGTGAG
CAATACTGAGCGCTGCTGCATGAGTGTGAGAACTTGTGAAGTACATGAAG
TACTCCAAAGTACAGGGATGCACGCGACAACGTGCATGTGGTTACCGAGG
GCTTTGTGTGCGAAAAGCTGCACGGGTTCCACTGGTGAGTTGTGCATAGC
GCTGCTGAGATAGCCACGACTGAGCGGTAGCGATACGCTCGATGGAACAC
ATGTACCCGCCATTGACGACAACTGGCAATGATGTGCATGTGCGTATGTA
TGCATGCTGCCCCTACAATCACTCATTCGGGTGCGCACATCAGGTACTGC
ACTTGTTGCAAAAGTGTGCGCTCAGGTTGTCACTTTGTGTCATAGCACAA
GAGTGCATGGGGCAAAACTGTACGCATAAACAGCAATGAGCAGACTGACT
ACAACGAGCTCCATGAGCTCATGACTCATCACACAAGCTGCGCAGTACGG
CAGCGGAGACAGGAATCAGCCCCACACTAGACTGGTCGTTAGTTACGTCT
AGTGTGATGCCGGCAGCTTTACGGTTAGGGTTATGAAGCTGATTAGGGTT
AGGGTTAGGCAGCCCCCATGGCTGCATCACGCCTGCACTGCACCGCTGAA
GTTCATTCTGACTGTTTCTTGATGATGTTGCGGGCTCACACCTCGTATAC
TTCAAGTACTTGAAGTATCTGCAGCCAAGTGTCATCAGTCGCACAGCTGG
CATGCCCCCCACTCATTTGATGCTCATACGCTTCACACACTCCCCCGCCG
GCGCAATTACGCTCCCTATTGTGACGCACTTCAATGATGACATATGCACC
GCATTCTTTAACGTTTATGGCATGGCCCGAGCACAGCTCCCCTGTCTGAA
TCAAATAATGAGAAACCAAGAGTGACCAACTTCCTGAGCACTGCCACACG
CATGAATGTCAACCCCAATTGTCCACCAATATGCTGCATCATCCGTGGTG
ATACTCAGGCGACTGGTACCAGCCATATGTCCGCTAATAATGTCGCCTCG
TCTGTGGTGATGCTCAGGCGACTGGTACCAACCATATGCTCACTCATAAC
GTCGTCTCTCGTCTGCGGTGATGCTCAGACGACTGGTAACAAGAGTGACC
ACCACCTCCTGAGCACTGCCACGTATGAATATCAACCAAATGCCCACTAA
TAATGATGCCCCGCCTGTGGTGATGCTCAGGCGACTGGTACCCGTGGGGT
ATCCTGTACGAGTACCAGGGCGACAGGGGCAATTCGCGCAGCCAGCTGCG
TGACGCATTTGCGCACGTCATCACATTGTTCCGCGAGGAGGGCTCGCCCG
TTAAGTTCCAGCTCGACATCAACGCGAACAACGGTGAGATGGATGGTAAG
CCAACAACCACCAGCCTGCAACACCTGCCTCAGGCTGGCGAGCACTTGAG
GTATTTGGTGCAGGTGGCGAGTCATATGGAATTTTAACAGGGATGGGCTT
TTTGGAGTTGGCCACGTGTTGACTACAAAACGTCCCCTTGTGATGGTGAC
CAAGCGCACAGACATGAGTGTGCTTGGGGGTATACTCTTCAATGCTGATG
TTGATTGTTGCAGCATGTCTTGAGCGTTACATTCCGACACTACCACTGCC
ATTTCAAGTTCAGCATGTTGTGCTTCAGTTATGCCATGGCAGACTCCATG
GCTACATGCTGCACACCAGCTCCTTGTTGGTGAATGGACACGAAACAGCA
CAACATGCACACAATGAAGCTTAGCAAGCATGGAGGGCGCAGCTCTCCTG
TGCTGTTGTGGTTGAGACAGAGTACCACCATCGCCACCAATGCTCACCAC
AGAGACAGAACATCGCCATTGCCACCAGTGCTCAATGCAAAATACTTGTT
AGTGCTCACCAGCTGGAAAATACTCTGCAATCAGGCTAGGCCCCCACACC
ACACATGCAATACATACCTCCTCGCCATCACCTGATTCTCACTCACTGTA
GTCTAGCCCCTGACTCGCGACGGTGTGTGCCAGATCACACGCGCACCTTC
CAAACTGTGTACGCAGCTTGATTCTGTACTGAATTCCAACATCATGCACA
CCAGTTTCAAGTGACGCGCAGCTCCTACATCAGTCACTCTTCGGTCCGCA
GTGCAGGCAGGGGCGACAAGAGGCCATTGATGACACGTGAGTTTCAACAT
GATGCTTGTAAGTCTCAGCACATGAAGCACGCGATAACGTAAAAAGTGAT
GCCAAAACTTCCTGTGCCAGAAAGCCTCACAACTCCAACAATGATGCCAA
AACTTCCTATTCCAAAACCTCTTGCAACCTCAACATGACGCAGCTCCAAC
ACACAAGTACACAACTTCAAGAATATTCCAAATACTGCAATGCCCCCAAT
GCAGGCAAGGCCGACAAGCGGCCATTCAGCGCCTTCTGGCCTGGCACAGA
TGGCCTGGATGCAGTGTCCATCACCTCCTACAACAGGGCCTACTCCACTC
CTGACCACCAGTACTCGGAGTCCTTCGCAGCCGGGTTTGCAGATGCATAC
CAGCAGGTGAGTTGGGGCTACAAGCACCGTGACCCGTGTTGTAGTACAAT
TTACTAGTGGAACGTGCATGCCTGCACGGCTTCGGTATCTGTTGAAGTTG
GTACCTGCCTGTGCGGTTATTTCCATGTATTTATGTATGCCTGAGCCTTT
TTGTTGATTACTGCACTACTACTGTAGTAAACGTACATACCAAAGACCAT
ATCACCAATGAGTATGCCCGTGAGATGTGCTGCAGTGAGTTTACTGCGCT
CACAAACTGCAGCCCGACCCTGCCTGTTTCGGTGCTCACAACACACACAA
CAAGCGCTGCCCCGTTTTGGTTTAAGCACGTTATAACAAGCACTTTGGCA
GGCCAGGATGCCCTTGCAACATTGTCGACCCATGGTCGACCAGCAAGAAA
CACCAACAATCAACACAAAACCCATTATGGGAACATCTGAGTGTCGGCTT
AAGTGACAAGCTTGGGTGCCTGATAACGTGAAAGCGTTTGTTGCTGCCAC
AGTCGTCAACTCGCGGCACAGCAGTATGTATGTATGTAGAGGCTGTCATG
TTGAAGAGGCTGCTACTGCTGCGGAGGGCCTCGCAGTGCAAGATATGTAG
AAGTATTGCGTGCTGCGCTGCTTGCCTACCTGCAGCTCGCAAACAGCATT
TGATGCTTGTGTTTGACGCTTGTGTTTCATGACTATATCTACGAAGTATG
CCGCAATAAACAATGTATTTGATGCCACTGCCTCACCCGCCTTTGGGATG
TCGAACTTCGCCCACTTGCATGTGAGGCCAAGCAGTACATCAAATATATG
CCTCTGAGATCCTCTATGGTATACCCTATACCTATGAAAGTAAAGTTTTG
GAACTTCAACACGCCCGCTTATATATTGGAGTGGCTGTTGTTGCTGTGTC
TTCTACTGCCATCTGCAGGTTTCTGAGCTCACCGACCTGCCTATCTGGGT
GGCTGAGACAGGTCAGTAAAACTCCAATTTTACCTGAATCATGTGTAACG
GTGACCCTTGACGCTGCTGTTGTGCGAACAGTGCACCTAGTTTGCCTGCG
GCTGACTTTGGATTTGCTGTTTGCTGCGTCCCCCCCTGCTGTGATCATGC
ACATGCAGTCAAAGATATGCAAGTTTTGTAGCTTCGAGTGTCCTCTTGTT
TGTGATGTGATCCCTAAACAGCAAGCCACCCTGCTTGAAGTCGTACGCAC
ACAGCATGCAGCCAGAAGCAGCTGATATGCTGCATACGACACTCATGTGC
CACATGAAGCAGCACAGGTGCTTTGAGCAGCTCTTTACATTTGTCTGCAT
TCACTGCTGCTGCAACACAACTGCACAGGCGCAATAGCTGGCTGCCCTGC
AGCAGCAGCTCGTATGGCAGCTGTCATGAGAGTGCAACAGCGGGTGAAGA
GACGCATGTACAGCCGCGCACGCTGAAGGAAGCGCGCCATTTCAGCACCT
GATGTTTTGATGTTTCTTGTTGAACTTTGTTGTTGAACTTTCAAACTCCA
ACTGCAGCCACCTCATCCTCCCACACCGACAAGCCTGCATGGATCCTGGA
TGCGTGGGAGTCCATTGCCCTGGACTTTCCCCGCGTGGTCCAGGTGTGTG
AAGGTGGAAGTGATCTTGAACTTCATGTTGAGGTTTGATGCGAGAGACGG
TAAAAGTCGTCACGAAAATGTTCAAGAAACTTATCTGGTTTGACTTGCGT
TGCGTCGTCTGACGTGCATTGCATCGTCCAGGTGTACTGAACTTGAACTA
GTAGCAGTATTAAATCTTTGTTAGTGGTACAGCAATCCCATCATAGAGTG
AATACACCAGGCGCCTCTTTTAAACATCAACTTCAAAAGTAACACTGTCT
TACACAAGCTTTAACACCGCAATGCTGCGCCATCACCAGAGACCTGCAAA
CTTCTCCAAGCACTTCATATGCCCACATTGTGCTCAACACCGATAACAAC
TGCAGCTGCGAGGAGGGCCATGCTTCTCACTCCAGTAGCAACAGCGCAGC
TCCTCAGACCTCATATACTTTGCATTTGCCTCAGATGAGAGTCAGCATTG
CTCAGCATGCAACAGCGCATATATCATACACCATATATCCTGCTCAGCTG
CTTGCTGATAGTCATGAGCCCAAGTGCGCCCTCTCACTTTGTGTGTGATG
CTATCCCCCTGGTATTCAGGTGACATGGTTCCTCAGCAACAAGGTCAATG
AGGGCTACCTCACCGACTGGGACCTCAACACTGAAGCGGTGCGTATAAAC
TTCAACTTCGACAATGAGCGTGCCATTCATGAACTTGAGCTGCCACTGCC
AAATACCTCGAGAGCAGCTGGCCTCAGGCCTATGTAGGTGCAGCCTCACA
CTCAGCAACATGGTTGTGGTGTCGCTGCACATGGGTGGCGTATGTGTCGT
TTTCATTAAGACGTGAAGTTGCCTTTAAATACATGGCTGCACATTGATGC
AGAGGGTACATACCACTAGGCTATGCGACAGAGTAGCAGGCGCATTTACT
GCAGGTATATACCTCTCATGATCTCAGGTTCGTTCCATGACTCAGATGAC
CATAGTATCACTCTGCCGGCAACAAATATCCTCACTCTGGCGGCCACTGC
AGTACTTGATTCACCTGTGCTTGAGGGGGGGAAACCCACTGTACAAAGCC
AGTACATCCTCACCGCCCGGGTACCTTGGCACCTTGCAGTACTCTGCCAG
GCGTCGCCTGGGGCAGTTTCGTAGTTGTTGAAACAGTTCTCAAAGTACCG
GTCCATGAGCAGGGGCCCATAAGGTATAGCACAGCACCCGTGATGCTTAC
AAAGCATACATTAAAGAAGCATACATTAAAGAAGTATACATTAAAGAAGT
ATGCTTTAACCTGCAGCCTCCAGCTTGCACTCAATATTACATCGAGCATC
ATGTCTTGAGTCTTGACCTAGCTTTTACGCCTGCGCCCTGGTTTCTGCCT
GCAGGATGTCCGCGCCTTTGTGGACGGCTTCCTGCTCATGCGTCAACTCA
CC
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Coding sequence (CDS) from alignment at Contig_36:644803..650954+

>mRNA_8391 ID=mRNA_8391|Name=jgi.p|Trimin1|132176|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=648bp|location=Sequence derived from alignment at Contig_36:644803..650954+ (Tribonema minus UTEX_B_3156 )
ATACAGGGCGAGTTTGATGATGCGTTGAGGGCGTTTGCGCAGGAGACGAC
GGTACGCGGCCGCGGCTTCTGGGTGCGCACGCTGCACGAGTTCAACGGCG
ACTGGTACCCGTGGGGTATCCTGTACGAGTACCAGGGCGACAGGGGCAAT
TCGCGCAGCCAGCTGCGTGACGCATTTGCGCACGTCATCACATTGTTCCG
CGAGGAGGGCTCGCCCGTTAAGTTCCAGCTCGACATCAACGCGAACAACG
GCAAGGCCGACAAGCGGCCATTCAGCGCCTTCTGGCCTGGCACAGATGGC
CTGGATGCAGTGTCCATCACCTCCTACAACAGGGCCTACTCCACTCCTGA
CCACCAGTACTCGGAGTCCTTCGCAGCCGGGTTTGCAGATGCATACCAGC
AGGTTTCTGAGCTCACCGACCTGCCTATCTGGGTGGCTGAGACAGCCACC
TCATCCTCCCACACCGACAAGCCTGCATGGATCCTGGATGCGTGGGAGTC
CATTGCCCTGGACTTTCCCCGCGTGGTCCAGGTGACATGGTTCCTCAGCA
ACAAGGTCAATGAGGGCTACCTCACCGACTGGGACCTCAACACTGAAGCG
GATGTCCGCGCCTTTGTGGACGGCTTCCTGCTCATGCGTCAACTCACC
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