mRNA_8359 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|349097
Unique NamemRNA_8359
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|349097 vs. uniprot
Match: A0A835ZG17_9STRA (Uncharacterized protein n=3 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZG17_9STRA)

HSP 1 Score: 577 bits (1487), Expect = 4.000e-205
Identity = 319/412 (77.43%), Postives = 331/412 (80.34%), Query Frame = 1
Query:    1 MTSLALAELLRKDSLRDPKG--VTGCLQQHRPDICHNDTLCVRRTWRKTYGDDMVKNSSTYKAGLNEVIERAEQMTRGATGREERAWAGRVKERVIAFDELSICDQRHLKASGRLEQTAARSYTGSVVVDRMLADLVQMPESAELPGPPAGTTAAA----------------------------------------------------------------LAELMATGQFSAAERERERAPYPWVLFQASPSSKPEVILLLCGSHSFLIGLKRLRSMKQVASAASCKNINSRFCKSANTAAKTVLGVASSAFSDVRALYVGLTLALYGSAKTTSKQMSEWTRRCVPNSNLPSTAKFLAACNVAYADALPRPPAPVPVQPATADVAAAESEENEIEDVKARAGGSCAVHADTV 1038
            MTSLALAELLRKDSLRD KG  VT CLQQH PDICH+DTLCVRRTWRKT GDDMVKNSSTY+AGLN+V+ERAEQM R ATGREERAWAGRVKERVIAFDELSIC+QR+LKASGRLEQTAARSYTGSVV+DRMLADLV++PESAELPGP AGT A A                                                                LAELMATGQFSAAERERERAPYPWVLF+ASPSSK EVILLLCGSHSFL GLKRLRSMKQVASAASCKNINSRFCKSANTAAKTVLGVASSAFSDVRALYVGLTLALYGSAKTTSKQMSEWTRRCVPNSNLP TAKFLAACNVAYADALPR PAP+PVQP TADV AAESEENEIEDVKARAGGSCAVHADT+
Sbjct:    1 MTSLALAELLRKDSLRDSKGPGVTDCLQQHHPDICHDDTLCVRRTWRKTCGDDMVKNSSTYRAGLNKVVERAEQMARSATGREERAWAGRVKERVIAFDELSICNQRNLKASGRLEQTAARSYTGSVVMDRMLADLVRVPESAELPGPTAGTAAVASGSASAGGDPATAQQLHTQGNGCAADRLSAAARALMDDMLATVDYSRPKVFELVCALAFMCGRSLAELMATGQFSAAERERERAPYPWVLFKASPSSKTEVILLLCGSHSFLNGLKRLRSMKQVASAASCKNINSRFCKSANTAAKTVLGVASSAFSDVRALYVGLTLALYGSAKTTSKQMSEWTRRCVPNSNLPFTAKFLAACNVAYADALPRTPAPLPVQPDTADVTAAESEENEIEDVKARAGGSCAVHADTI 412          
BLAST of jgi.p|Trimin1|349097 vs. uniprot
Match: A0A835YYM7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYM7_9STRA)

HSP 1 Score: 575 bits (1483), Expect = 1.460e-204
Identity = 318/410 (77.56%), Postives = 327/410 (79.76%), Query Frame = 1
Query:    1 MTSLALAELLRKDSLRDPKGVTGCLQQHRPDICHNDTLCVRRTWRKTYGDDMVKNSSTYKAGLNEVIERAEQMTRGATGREERAWAGRVKERVIAFDELSICDQRHLKASGRLEQTAARSYTGSVVVDRMLADLVQMPESAELPGPPAGTTAAA----------------------------------------------------------------LAELMATGQFSAAERERERAPYPWVLFQASPSSKPEVILLLCGSHSFLIGLKRLRSMKQVASAASCKNINSRFCKSANTAAKTVLGVASSAFSDVRALYVGLTLALYGSAKTTSKQMSEWTRRCVPNSNLPSTAKFLAACNVAYADALPRPPAPVPVQPATADVAAAESEENEIEDVKARAGGSCAVHADTV 1038
            MTSLALAELLRKDS+RDPKGVTGCLQQHRPDICH+DTLCVR TWRKT GDDMVKNSSTYKAGLNEV+ERA QM RGATGREERAWAGRVKERVI FDELSICDQRHLKASGRLEQTAARSYTGS VVDRMLADLVQMPESAELPGPPAGTTAAA                                                                LAELMATGQFS AERERERAPYPWVLFQASPSSK +VILLLCGSH FLIGLKRLRSMKQVASAASCKNINSRFCKSAN+AAKTVLGVA  AFSDVRALYVGLTLALYGSAKTTSKQMSEWTRRCVPNSNLPST KFLAACNVAYADAL + PAP+PVQ A ADVAAAESEE+EIEDV+A AGGSCA HA TV
Sbjct:    1 MTSLALAELLRKDSVRDPKGVTGCLQQHRPDICHDDTLCVRHTWRKTCGDDMVKNSSTYKAGLNEVVERAGQMARGATGREERAWAGRVKERVIGFDELSICDQRHLKASGRLEQTAARSYTGSAVVDRMLADLVQMPESAELPGPPAGTTAAASASAPAGRDPATAQQLHTQGNGCAADRLSAATRALMEDMLATVDYSRPKVFELVCALAFMCGCSLAELMATGQFSTAERERERAPYPWVLFQASPSSKTDVILLLCGSHRFLIGLKRLRSMKQVASAASCKNINSRFCKSANSAAKTVLGVACGAFSDVRALYVGLTLALYGSAKTTSKQMSEWTRRCVPNSNLPSTVKFLAACNVAYADALAQTPAPLPVQLAVADVAAAESEESEIEDVEAPAGGSCA-HAGTV 409          
BLAST of jgi.p|Trimin1|349097 vs. uniprot
Match: A0A835ZC61_9STRA (Uncharacterized protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC61_9STRA)

HSP 1 Score: 563 bits (1451), Expect = 1.210e-199
Identity = 313/412 (75.97%), Postives = 323/412 (78.40%), Query Frame = 1
Query:    1 MTSLALAELLRKDSLRDPKGVTGCLQQHRPDICHNDTLCVRRTWRKTYGDDMVKNSSTYKAGLNEVIERAEQMTRGATGREERAWAGRVKERVIAFDELSICDQRHLKASGRLEQTAARSYTGSVVVDRMLADLVQMPESAELPGPPAGTTAAA----------------------------------------------------------------LAELMATGQFSAAERERERAPYPWVLFQASPSSKPEVILLLCGSHSFLIGLKRLRSMKQVASAASCKNINSRFCKSANTAAKTVLGVASSAFSDVRALYVGLTLALYGSAKTTSKQMSEWTRRCVPNSNLPSTAKFLAACNVAYADALPRPPAPVPVQPATA--DVAAAESEENEIEDVKARAGGSCAVHADTV 1038
            MTSLA AELL+KDSLRDPK V GCLQQHRPDICH DTLC RRTWRKT GDD+VKNSS YKAGLNE +ERAEQM R ATGREERAWA RVKERVI FDELSIC+QR+LKA GRLEQTAARSYTGSVVVDRMLADLV++PESAELPGPPAGT AAA                                                                LAELMATGQFSAAERERERAPYPWVLFQASPSSK +VILLLCGSHSFL GLKRLRSMKQVASAASCKNINSRFCKSANTAAKTVLGVASSAFSDV ALYVGLTLALYGSAKTTSKQMSEWTRRCVPNSNLPSTAKFLAACNVAY DALP+ P P+PVQPATA  DVAA ESEENEIEDVKARAGGSCA HA TV
Sbjct:    1 MTSLAHAELLQKDSLRDPKLVAGCLQQHRPDICHADTLCARRTWRKTCGDDVVKNSSMYKAGLNEAVERAEQMARSATGREERAWASRVKERVIGFDELSICNQRNLKARGRLEQTAARSYTGSVVVDRMLADLVRVPESAELPGPPAGTAAAASASAPTVDGRATTQQLHTQGNGCAADRLSATARALMDDMLATVDYSRPKVFELVCALAFMSGRSLAELMATGQFSAAERERERAPYPWVLFQASPSSKTDVILLLCGSHSFLNGLKRLRSMKQVASAASCKNINSRFCKSANTAAKTVLGVASSAFSDVSALYVGLTLALYGSAKTTSKQMSEWTRRCVPNSNLPSTAKFLAACNVAYTDALPQRPTPLPVQPATALSDVAAVESEENEIEDVKARAGGSCAAHAGTV 412          
BLAST of jgi.p|Trimin1|349097 vs. uniprot
Match: A0A835Z0Q8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0Q8_9STRA)

HSP 1 Score: 561 bits (1447), Expect = 4.560e-199
Identity = 311/406 (76.60%), Postives = 324/406 (79.80%), Query Frame = 1
Query:    1 MTSLALAELLRKDSLRDPKGVTGCLQQHRPDICHNDTLCVRRTWRKTYGDDMVKNSSTYKAGLNEVIERAEQMTRGATGREERAWAGRVKERVIAFDELSICDQRHLKASGRLEQTAARSYTGSVVVDRMLADLVQMPESAELPGPPAGTTAAA----------------------------------------------------------------LAELMATGQFSAAERERERAPYPWVLFQASPSSKPEVILLLCGSHSFLIGLKRLRSMKQVASAASCKNINSRFCKSANTAAKTVLGVASSAFSDVRALYVGLTLALYGSAKTTSKQMSEWTRRCVPNSNLPSTAKFLAACNVAYADALPRPPAPVPVQPATADVAAAESEENEIEDVKARAGGSCAVH 1026
            MTSLALAELL+KDSLRDPK VTGCLQQHRP+ICH+DTLCVRRT RK YGDD+VKNSS YKAGLNEV++RAEQM RGATGREERAWA R+KERVIAFD LSICDQR+LKASGRLEQTAA+SYTGSVVVDRMLADLVQ PESAELPG PAGT AAA                                                                LAELMATGQFSAAERERERAPYPWVLFQASPSSK EVILLLCGSHSFL GLKRLRSMKQVASAASCKNINSRFCKSANTAAKTVLGVASSAFSDVRALYVGLTLALYGSAKTTSKQMSEWTRRCVPNSNLPSTAKFLAACNVAY DALP+ P P+PVQPA ADVAAAESEE+EIEDV+A AGGSCA H
Sbjct:    1 MTSLALAELLQKDSLRDPKVVTGCLQQHRPNICHDDTLCVRRTRRKNYGDDVVKNSSAYKAGLNEVVKRAEQMVRGATGREERAWARRIKERVIAFDVLSICDQRNLKASGRLEQTAAKSYTGSVVVDRMLADLVQGPESAELPGSPAGTVAAASASAPXGGHLATSQQLDTQGNGCAADRLSAAGRALMDDMLATVDYSRPKVFELVCALAFMCGRSLAELMATGQFSAAERERERAPYPWVLFQASPSSKTEVILLLCGSHSFLNGLKRLRSMKQVASAASCKNINSRFCKSANTAAKTVLGVASSAFSDVRALYVGLTLALYGSAKTTSKQMSEWTRRCVPNSNLPSTAKFLAACNVAYTDALPQRPTPLPVQPAVADVAAAESEESEIEDVEAPAGGSCASH 406          
BLAST of jgi.p|Trimin1|349097 vs. uniprot
Match: A0A836CES6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CES6_9STRA)

HSP 1 Score: 560 bits (1442), Expect = 1.130e-195
Identity = 312/412 (75.73%), Postives = 323/412 (78.40%), Query Frame = 1
Query:    1 MTSLALAELLRKDSLRDPKGVTGCLQQHRPDICHNDTLCVRRTWRKTYGDDMVKNSSTYKAGLNEVIERAEQMTRGATGREERAWAGRVKERVIAFDELSICDQRHLKASGRLEQTAARSYTGSVVVDRMLADLVQMPESAELPGPPAGTTAAA----------------------------------------------------------------LAELMATGQFSAAERERERAPYPWVLFQASPSSKPEVILLLCGSHSFLIGLKRLRSMKQVASAASCKNINSRFCKSANTAAKTVLGVASSAFSDVRALYVGLTLALYGSAKTTSKQMSEWTRRCVPNSNLPSTAKFLAACNVAYADALPRPPAPVPVQPATA--DVAAAESEENEIEDVKARAGGSCAVHADTV 1038
            MTSLALAELL+KDSLRDPK V GCLQQHRPDICH DTLC RRTWRKT G+D+VKNSS YKAGLNE +ERAEQM R ATGREERAWA RVKERVIAFD LSIC+QR+LKASGRLEQTAARSYTGSVVVDRMLADLV++PESAELPGPPAGT AAA                                                                LAELMAT QFSAAERERERAPYPWVLFQASPSSK EVILLLCGSHSFL GLKRLRSMKQVASAASCK INSRFCKSANTAAKTVLGVASSAFSDVRALYVGLTLALYGSAKTTSKQMSEWTRRCVPNSNLPSTAKFLAACNVAY DALP+ P P+PVQPATA  DVAA ESEENEIEDVKARAG SCA HA T+
Sbjct:    1 MTSLALAELLQKDSLRDPKLVAGCLQQHRPDICHADTLCARRTWRKTCGNDVVKNSSMYKAGLNEAVERAEQMARSATGREERAWASRVKERVIAFDALSICNQRNLKASGRLEQTAARSYTGSVVVDRMLADLVRVPESAELPGPPAGTAAAASASAPTVDGRATTQQLHTQGNGCSADRLSPAARALMDDMLATVAYSRPKVFELVCALAFMSGRSLAELMATSQFSAAERERERAPYPWVLFQASPSSKTEVILLLCGSHSFLNGLKRLRSMKQVASAASCKYINSRFCKSANTAAKTVLGVASSAFSDVRALYVGLTLALYGSAKTTSKQMSEWTRRCVPNSNLPSTAKFLAACNVAYTDALPQRPTPLPVQPATAESDVAAVESEENEIEDVKARAGSSCAAHAGTL 412          
BLAST of jgi.p|Trimin1|349097 vs. uniprot
Match: A0A835Z5E7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5E7_9STRA)

HSP 1 Score: 556 bits (1434), Expect = 9.210e-191
Identity = 311/412 (75.49%), Postives = 322/412 (78.16%), Query Frame = 1
Query:    1 MTSLALAELLRKDSLRDPKGVTGCLQQHRPDICHNDTLCVRRTWRKTYGDDMVKNSSTYKAGLNEVIERAEQMTRGATGREERAWAGRVKERVIAFDELSICDQRHLKASGRLEQTAARSYTGSVVVDRMLADLVQMPESAELPGPPAGTTAAA----------------------------------------------------------------LAELMATGQFSAAERERERAPYPWVLFQASPSSKPEVILLLCGSHSFLIGLKRLRSMKQVASAASCKNINSRFCKSANTAAKTVLGVASSAFSDVRALYVGLTLALYGSAKTTSKQMSEWTRRCVPNSNLPSTAKFLAACNVAYADALPRPPAPVPVQPATA--DVAAAESEENEIEDVKARAGGSCAVHADTV 1038
            MTSLALAELL+KDSLRDPK V GCLQQHR DICH DTLC RRTWRKT G+D+VKNSS YKAGLNE +ERAEQM R ATGREERAWA RVKERVI FDELSIC+QR+LKASGRLEQTAARSYTGSVVVDRMLADLV++PESAELPGPPAGT AAA                                                                LAELMAT QFSAAERERERAPYPWVLFQASPSSK EVILLLCGSHSFL GLKRLRSMKQVASAASCK INSRFCKSANTAAKTVLGVASSAFSDVRALYVGLTLALYGSAKTTSKQMSEWTRRCVPNSNLPSTAKFLAACNVAY DALP+ P P+PVQPATA  DVAA ESEENEIEDVKARAG SCA HA T+
Sbjct:    1 MTSLALAELLQKDSLRDPKLVAGCLQQHRLDICHADTLCARRTWRKTCGNDVVKNSSMYKAGLNEAVERAEQMARSATGREERAWASRVKERVIGFDELSICNQRNLKASGRLEQTAARSYTGSVVVDRMLADLVRVPESAELPGPPAGTAAAASASAPTVDGRATTQQLHTQGNGCSADRLSPAARALMDDMLATVDYSRPKVFELVCALAFMSGRSLAELMATSQFSAAERERERAPYPWVLFQASPSSKTEVILLLCGSHSFLNGLKRLRSMKQVASAASCKYINSRFCKSANTAAKTVLGVASSAFSDVRALYVGLTLALYGSAKTTSKQMSEWTRRCVPNSNLPSTAKFLAACNVAYTDALPQRPTPLPVQPATAESDVAAVESEENEIEDVKARAGSSCAAHAGTL 412          
BLAST of jgi.p|Trimin1|349097 vs. uniprot
Match: A0A836CF72_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CF72_9STRA)

HSP 1 Score: 450 bits (1157), Expect = 2.690e-154
Identity = 264/395 (66.84%), Postives = 274/395 (69.37%), Query Frame = 1
Query:   34 KDSLRDPKGVTGCLQQHRPDICHNDTLCVRRTWRKTYGDDMVKNSSTYKAGLNEVIERAEQMTRGATGREERAWAGRVKERVIAFDELSICDQRHLKASGRLEQTAARSYTGSVVVDRMLADLVQMPESAELPGPPAGTTAAA----------------------------------------------------------------LAELMATGQFSAAERERERAPYPWVLFQASPSSKPEVILLLCGSHSFLIGLKRLRSMKQVASAASCKNINSRFCKSANTAAKTVLGVASSAFSDVRALYVGLTLALYGSAKTTSKQMSEWTRRCVPNSNLPSTAKFLAACNVAYADALPRPPAPVPVQPATADVAAAESEENEIEDVKARAGGSCAVH 1026
            KDSLRDPK VTGCLQQHRP+ICH+DTLCVRRT RK YGDD+VKNSS YKAGLNEV+ERAEQM RGATGREERAWA R+KERVIAFD LSICDQR+LKASGRLEQTAA+SYTGSVVVDRMLADLVQ PESAELPG PAGT AAA                                                                LAELMATGQFSAAERERERAPYPWVLFQASPSSK EVILLLCGSHSFL GLKRLRSMKQVASAASCKNINSRFCKSANTAAKTVLGVASSAFSDVRALYVGLTLALYGSAKTTSKQM+                                           ADVAAAESEE+EIEDV+A AGGSCA H
Sbjct:  100 KDSLRDPKVVTGCLQQHRPNICHDDTLCVRRTRRKNYGDDVVKNSSAYKAGLNEVVERAEQMVRGATGREERAWARRIKERVIAFDVLSICDQRNLKASGRLEQTAAKSYTGSVVVDRMLADLVQGPESAELPGSPAGTVAAASASAPXGGHLATSQQLDTQGNGCAADRLSAAGRAVMDDMLATVDYSRPKVFELVCALAFMCGRSLAELMATGQFSAAERERERAPYPWVLFQASPSSKTEVILLLCGSHSFLNGLKRLRSMKQVASAASCKNINSRFCKSANTAAKTVLGVASSAFSDVRALYVGLTLALYGSAKTTSKQMT------------------------------------------VADVAAAESEESEIEDVEAPAGGSCASH 452          
BLAST of jgi.p|Trimin1|349097 vs. uniprot
Match: A0A836C7S3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7S3_9STRA)

HSP 1 Score: 418 bits (1074), Expect = 2.070e-141
Identity = 251/409 (61.37%), Postives = 258/409 (63.08%), Query Frame = 1
Query:    1 MTSLALAELLRKDSLRDPKGVTGCLQQHRPDICHNDTLCVRRTWRKTYGDDMVKNSSTYKAGLNEVIERAEQMTRGATGREERAWAGRVKERVIAFDELSICDQRHLKASGRLEQTAARSYTGSVVVDRMLADLVQMPESAELPGPPAGTTAAA----------------------------------------------------------------LAELMATGQFSAAERERERAPYPWVLFQASPSSKPEVILLLCGSHSFLIGLKRLRSMKQVASAASCKNINSRFCKSANTAAKTVLGVASSAFSDVRALYVGLTLALYGSAKTTSKQMSEWTRRCVPNSNLPSTAKFLAACNVAYADALPRPPAPVPVQPATADVAAAESEENEIEDVKARAGGSCAVHADT 1035
            MTSLALAELLRKDSLRDPK V GCLQQHRPDICH+DTLCVRRTWRKT GDD+VKNSSTYKAGLNEVIERAEQM RGATGREERAWAGRVKERVIAFDELSIC+QR+ KASGRLEQTAARSYTGSVVVDRMLADLV++PESAELPGPPA T AAA                                                                LAELMATGQFSAAERERERAPYPWVL QASPSSK                                 NINSRFCKSANTAAKTVLGVASSAFSDVRALYVGLTLALYGSAKTTSKQMSEWTRRC                                            SEENEI+DVKARAGGSCA HA T
Sbjct:    1 MTSLALAELLRKDSLRDPKAVAGCLQQHRPDICHDDTLCVRRTWRKTCGDDVVKNSSTYKAGLNEVIERAEQMARGATGREERAWAGRVKERVIAFDELSICNQRNFKASGRLEQTAARSYTGSVVVDRMLADLVRVPESAELPGPPAHTAAAASASAPTVDGRATTQQLHTQGNGCAADRLSAAARALMDDMLAMVDYSRPKVFELVCALAFMCGRSLAELMATGQFSAAERERERAPYPWVLSQASPSSKT--------------------------------NINSRFCKSANTAAKTVLGVASSAFSDVRALYVGLTLALYGSAKTTSKQMSEWTRRC--------------------------------------------SEENEIKDVKARAGGSCAAHAGT 333          
BLAST of jgi.p|Trimin1|349097 vs. uniprot
Match: A0A835ZAN0_9STRA (Uncharacterized protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAN0_9STRA)

HSP 1 Score: 384 bits (987), Expect = 7.660e-122
Identity = 236/404 (58.42%), Postives = 256/404 (63.37%), Query Frame = 1
Query:    1 MTSLALAELLRKDSLRDPKGVTGCLQQHRPDICHNDTLCVRRTWRKTYGDDMVKNSSTYKAGLNEVIERAEQMTRGATGREERAWAGRVKERVIAFDELSICDQRHLKASGRLEQTAARSYTGSVVVDRMLADLVQMPESAELPGPPAGTTAAA----------------------------------------------------------------LAELMATGQFSAAERERERAPYPWVLFQASPSSKPEVILLLCGSHSFLIGLKRLRSMKQVASAASCKNINSRFCKSANTAAKTVLGVASSAFSDVRALYVGLTLALYGSAKTTSKQMSEWTRRCVPNSNLPSTAKFLAACNVAYADALPRPPAPVPVQPATA--DVAAAESEENEIEDVKARAGGS 1014
            MTSLALAELL+KDSLRDPK V GCLQQHRPDICH+DTLC RRT RKT G+D+VKNSS YKAGLNE +ERAEQM R ATGREERAWAG VKERVI FDELSIC+QR LKA GRLEQTAARSYTGSVVVDRMLADLV+ PESAELPGPPAGT AAA                                                                LAELMATGQFSAAERERERAPYPWVLFQASPSSK E ILLLCGSHSFL GLKRLR++ +       + +       A+  A+T+       +  V +L  GL                               +KFLAACNVAY DALP+ P P+PVQPATA  DVAAAESEENEIEDVKARAGGS
Sbjct:  510 MTSLALAELLQKDSLRDPKLVAGCLQQHRPDICHDDTLCARRTGRKTCGNDVVKNSSMYKAGLNEAVERAEQMVRSATGREERAWAGPVKERVIGFDELSICNQRKLKARGRLEQTAARSYTGSVVVDRMLADLVRAPESAELPGPPAGTAAAASASAPTVDGRATTQQLHTQGNGCAADRLSAAARALMDDTLATVDYSRPKVFELVCALAFMCGRSLAELMATGQFSAAERERERAPYPWVLFQASPSSKTEAILLLCGSHSFLNGLKRLRTINRWRQRRCARTLTR-----ASARAQTLRPRLCWGWPPVHSLTSGL-------------------------------SKFLAACNVAYTDALPQRPTPLPVQPATAESDVAAAESEENEIEDVKARAGGS 877          
BLAST of jgi.p|Trimin1|349097 vs. uniprot
Match: A0A835ZBV3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBV3_9STRA)

HSP 1 Score: 211 bits (536), Expect = 3.730e-64
Identity = 113/120 (94.17%), Postives = 116/120 (96.67%), Query Frame = 1
Query:  631 MKQVASAASCKNINSRFCKSANTAAKTVLGVASSAFSDVRALYVGLTLALYGSAKTTSKQMSEWTRRCVPNSNLPSTAKFLAACNVAYADALPRPPAPVPVQPATADVAAAESEENEIED 990
            MKQVASAASCKNINSRFCKSANTAAKTVLGVASS+FSDVRALYVGLTLALYGSAKTTSKQMSEWTRRCVPNSNLPSTAKFLAACNVAY DALP+ P P+PVQPA ADVAAAESEENEIED
Sbjct:    1 MKQVASAASCKNINSRFCKSANTAAKTVLGVASSSFSDVRALYVGLTLALYGSAKTTSKQMSEWTRRCVPNSNLPSTAKFLAACNVAYTDALPQRPTPLPVQPAVADVAAAESEENEIED 120          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|349097 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 13
Match NameE-valueIdentityDescription
A0A835ZG17_9STRA4.000e-20577.43Uncharacterized protein n=3 Tax=Tribonema minus Ta... [more]
A0A835YYM7_9STRA1.460e-20477.56Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZC61_9STRA1.210e-19975.97Uncharacterized protein n=2 Tax=Tribonema minus Ta... [more]
A0A835Z0Q8_9STRA4.560e-19976.60Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CES6_9STRA1.130e-19575.73Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z5E7_9STRA9.210e-19175.49Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CF72_9STRA2.690e-15466.84Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836C7S3_9STRA2.070e-14161.37Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZAN0_9STRA7.660e-12258.42Uncharacterized protein n=2 Tax=Tribonema minus Ta... [more]
A0A835ZBV3_9STRA3.730e-6494.17Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_36contigContig_36:238349..239582 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|349097|estExt_Genemark1.C_Ctg_360020
Hectar predicted targeting categoryother localisation
TranscriptId349419
TrackFilteredModels1
ProteinId349097
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|349097gene_8359Tribonema minus UTEX_B_3156 geneContig_36 238349..239582 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_8359_1exon_8359_1Tribonema minus UTEX_B_3156 exonContig_36 238349..238809 +
exon_8359_2exon_8359_2Tribonema minus UTEX_B_3156 exonContig_36 239003..239582 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_8359CDS_8359Tribonema minus UTEX_B_3156 CDSContig_36 238349..238809 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|349097Trimin1|349097|estExt_Genemark1.C_Ctg_360020Tribonema minus UTEX_B_3156 polypeptideContig_36 238349..239582 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_8359 ID=mRNA_8359|Name=jgi.p|Trimin1|349097|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1041bp|location=Sequence derived from alignment at Contig_36:238349..239582+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGACTTCACTAGCGCTCGCCGAGTTGCTGCGGAAGGATAGTCTAAGGGA
CCCCAAGGGAGTAACCGGTTGCCTGCAGCAGCACCGCCCCGACATCTGTC
ACAATGACACGCTGTGCGTGAGGCGCACATGGCGCAAGACCTACGGCGAT
GACATGGTCAAGAACAGCAGCACGTACAAGGCGGGACTGAACGAGGTCAT
CGAGCGCGCAGAGCAGATGACGCGCGGCGCCACAGGCCGTGAGGAGAGAG
CATGGGCAGGGCGGGTCAAGGAGCGCGTCATCGCCTTCGACGAGCTCAGC
ATTTGCGATCAACGCCACCTCAAGGCGAGCGGACGCCTTGAGCAGACCGC
GGCAAGGTCTTACACCGGCAGCGTCGTCGTGGACCGCATGTTGGCGGACC
TCGTGCAGATGCCCGAGTCGGCAGAGCTGCCTGGTCCGCCGGCAGGCACG
ACGGCGGCAGCCCTGGCCGAATTGATGGCAACGGGCCAGTTCAGCGCTGC
GGAGAGGGAGCGCGAGCGTGCACCATACCCGTGGGTACTCTTCCAGGCCA
GCCCAAGCAGCAAGCCGGAAGTGATTCTACTGCTGTGCGGATCCCACAGC
TTCCTCATCGGGCTGAAGCGGCTACGGAGCATGAAACAGGTGGCGTCAGC
GGCGTCGTGCAAGAACATTAACTCGCGCTTCTGCAAGAGCGCAAACACTG
CGGCCAAGACTGTGTTGGGGGTGGCCTCCAGTGCCTTCTCTGACGTCAGG
GCTCTCTATGTGGGGCTCACCCTCGCTCTGTACGGCAGCGCCAAGACCAC
CAGCAAGCAGATGAGTGAGTGGACGCGGCGGTGCGTACCGAACTCAAACC
TTCCCTCTACAGCAAAGTTCCTGGCCGCGTGCAACGTCGCTTACGCAGAT
GCGCTCCCCCGGCCGCCGGCGCCGGTGCCAGTTCAACCAGCCACGGCAGA
TGTCGCTGCGGCGGAGAGCGAGGAGAATGAGATCGAGGACGTCAAAGCGC
GTGCAGGCGGCAGCTGCGCTGTGCACGCAGACACCGTATGA
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protein sequence of jgi.p|Trimin1|349097

>Trimin1|349097|estExt_Genemark1.C_Ctg_360020 ID=Trimin1|349097|estExt_Genemark1.C_Ctg_360020|Name=jgi.p|Trimin1|349097|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=347bp
MTSLALAELLRKDSLRDPKGVTGCLQQHRPDICHNDTLCVRRTWRKTYGD
DMVKNSSTYKAGLNEVIERAEQMTRGATGREERAWAGRVKERVIAFDELS
ICDQRHLKASGRLEQTAARSYTGSVVVDRMLADLVQMPESAELPGPPAGT
TAAALAELMATGQFSAAERERERAPYPWVLFQASPSSKPEVILLLCGSHS
FLIGLKRLRSMKQVASAASCKNINSRFCKSANTAAKTVLGVASSAFSDVR
ALYVGLTLALYGSAKTTSKQMSEWTRRCVPNSNLPSTAKFLAACNVAYAD
ALPRPPAPVPVQPATADVAAAESEENEIEDVKARAGGSCAVHADTV*
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mRNA from alignment at Contig_36:238349..239582+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_8359 ID=mRNA_8359|Name=jgi.p|Trimin1|349097|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1234bp|location=Sequence derived from alignment at Contig_36:238349..239582+ (Tribonema minus UTEX_B_3156 )
ATGACTTCACTAGCGCTCGCCGAGTTGCTGCGGAAGGATAGTCTAAGGGA CCCCAAGGGAGTAACCGGTTGCCTGCAGCAGCACCGCCCCGACATCTGTC ACAATGACACGCTGTGCGTGAGGCGCACATGGCGCAAGACCTACGGCGAT GACATGGTCAAGAACAGCAGCACGTACAAGGCGGGACTGAACGAGGTCAT CGAGCGCGCAGAGCAGATGACGCGCGGCGCCACAGGCCGTGAGGAGAGAG CATGGGCAGGGCGGGTCAAGGAGCGCGTCATCGCCTTCGACGAGCTCAGC ATTTGCGATCAACGCCACCTCAAGGCGAGCGGACGCCTTGAGCAGACCGC GGCAAGGTCTTACACCGGCAGCGTCGTCGTGGACCGCATGTTGGCGGACC TCGTGCAGATGCCCGAGTCGGCAGAGCTGCCTGGTCCGCCGGCAGGCACG ACGGCGGCAGCGTCAGCGTCAGCGCCAGCGGGCCGTGACCCAGCTACGGC ACAGCAGCTTCACACGCAGGGTAATGGTTGTGCCGCCGACAGATTGAGTG CCGCAGCGCGAGCTCTGATGGACGACATGCTGGCAACTGTCAGACTACTC TCGCCCCAAGGTGTTTGAGCTGGTGTGCGCATTGGCGTTCATGTGCGGCC GCAGCCTGGCCGAATTGATGGCAACGGGCCAGTTCAGCGCTGCGGAGAGG GAGCGCGAGCGTGCACCATACCCGTGGGTACTCTTCCAGGCCAGCCCAAG CAGCAAGCCGGAAGTGATTCTACTGCTGTGCGGATCCCACAGCTTCCTCA TCGGGCTGAAGCGGCTACGGAGCATGAAACAGGTGGCGTCAGCGGCGTCG TGCAAGAACATTAACTCGCGCTTCTGCAAGAGCGCAAACACTGCGGCCAA GACTGTGTTGGGGGTGGCCTCCAGTGCCTTCTCTGACGTCAGGGCTCTCT ATGTGGGGCTCACCCTCGCTCTGTACGGCAGCGCCAAGACCACCAGCAAG CAGATGAGTGAGTGGACGCGGCGGTGCGTACCGAACTCAAACCTTCCCTC TACAGCAAAGTTCCTGGCCGCGTGCAACGTCGCTTACGCAGATGCGCTCC CCCGGCCGCCGGCGCCGGTGCCAGTTCAACCAGCCACGGCAGATGTCGCT GCGGCGGAGAGCGAGGAGAATGAGATCGAGGACGTCAAAGCGCGTGCAGG CGGCAGCTGCGCTGTGCACGCAGACACCGTATGA
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Coding sequence (CDS) from alignment at Contig_36:238349..239582+

>mRNA_8359 ID=mRNA_8359|Name=jgi.p|Trimin1|349097|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1041bp|location=Sequence derived from alignment at Contig_36:238349..239582+ (Tribonema minus UTEX_B_3156 )
ATGACTTCACTAGCGCTCGCCGAGTTGCTGCGGAAGGATAGTCTAAGGGA
CCCCAAGGGAGTAACCGGTTGCCTGCAGCAGCACCGCCCCGACATCTGTC
ACAATGACACGCTGTGCGTGAGGCGCACATGGCGCAAGACCTACGGCGAT
GACATGGTCAAGAACAGCAGCACGTACAAGGCGGGACTGAACGAGGTCAT
CGAGCGCGCAGAGCAGATGACGCGCGGCGCCACAGGCCGTGAGGAGAGAG
CATGGGCAGGGCGGGTCAAGGAGCGCGTCATCGCCTTCGACGAGCTCAGC
ATTTGCGATCAACGCCACCTCAAGGCGAGCGGACGCCTTGAGCAGACCGC
GGCAAGGTCTTACACCGGCAGCGTCGTCGTGGACCGCATGTTGGCGGACC
TCGTGCAGATGCCCGAGTCGGCAGAGCTGCCTGGTCCGCCGGCAGGCACG
ACGGCGGCAGCCCTGGCCGAATTGATGGCAACGGGCCAGTTCAGCGCTGC
GGAGAGGGAGCGCGAGCGTGCACCATACCCGTGGGTACTCTTCCAGGCCA
GCCCAAGCAGCAAGCCGGAAGTGATTCTACTGCTGTGCGGATCCCACAGC
TTCCTCATCGGGCTGAAGCGGCTACGGAGCATGAAACAGGTGGCGTCAGC
GGCGTCGTGCAAGAACATTAACTCGCGCTTCTGCAAGAGCGCAAACACTG
CGGCCAAGACTGTGTTGGGGGTGGCCTCCAGTGCCTTCTCTGACGTCAGG
GCTCTCTATGTGGGGCTCACCCTCGCTCTGTACGGCAGCGCCAAGACCAC
CAGCAAGCAGATGAGTGAGTGGACGCGGCGGTGCGTACCGAACTCAAACC
TTCCCTCTACAGCAAAGTTCCTGGCCGCGTGCAACGTCGCTTACGCAGAT
GCGCTCCCCCGGCCGCCGGCGCCGGTGCCAGTTCAACCAGCCACGGCAGA
TGTCGCTGCGGCGGAGAGCGAGGAGAATGAGATCGAGGACGTCAAAGCGC
GTGCAGGCGGCAGCTGCGCTGTGCACGCAGACACCGTATGA
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