mRNA_822 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|156979
Unique NamemRNA_822
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
[Close]
BLAST of jgi.p|Trimin1|156979 vs. uniprot
Match: A0A836CIG8_9STRA (Putative serine/threonine kinase-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIG8_9STRA)

HSP 1 Score: 550 bits (1418), Expect = 4.250e-198
Identity = 273/273 (100.00%), Postives = 273/273 (100.00%), Query Frame = 1 
Query:    1 MNRQESRDTCKIKPGDIIDRYRILKLLGTGASGQVFLVDDSGKQFAMKVVRLPDMHKTKTYTRLKREVEIMKRLDNERIVKLYRVLKGSTCIYLICEYVAGGDLFDKIALNNQLTETEARRYFRQIVEGMVYCHSQNISHRDIKPENIMITSCDDVKIADFGLSRIKTQTTVVFDTFCGTLNYVAPELLAKRPYDSKCDIWSLGIMLYVMLSGRFPYDSDDDEETAHMILDDQFTFPASIVDGNAKNLISQMLQKRPESRPTMIQVAAHQWLL 819
            MNRQESRDTCKIKPGDIIDRYRILKLLGTGASGQVFLVDDSGKQFAMKVVRLPDMHKTKTYTRLKREVEIMKRLDNERIVKLYRVLKGSTCIYLICEYVAGGDLFDKIALNNQLTETEARRYFRQIVEGMVYCHSQNISHRDIKPENIMITSCDDVKIADFGLSRIKTQTTVVFDTFCGTLNYVAPELLAKRPYDSKCDIWSLGIMLYVMLSGRFPYDSDDDEETAHMILDDQFTFPASIVDGNAKNLISQMLQKRPESRPTMIQVAAHQWLL
Sbjct:    1 MNRQESRDTCKIKPGDIIDRYRILKLLGTGASGQVFLVDDSGKQFAMKVVRLPDMHKTKTYTRLKREVEIMKRLDNERIVKLYRVLKGSTCIYLICEYVAGGDLFDKIALNNQLTETEARRYFRQIVEGMVYCHSQNISHRDIKPENIMITSCDDVKIADFGLSRIKTQTTVVFDTFCGTLNYVAPELLAKRPYDSKCDIWSLGIMLYVMLSGRFPYDSDDDEETAHMILDDQFTFPASIVDGNAKNLISQMLQKRPESRPTMIQVAAHQWLL 273
[Close]
BLAST of jgi.p|Trimin1|156979 vs. uniprot
Match: A0A835Z4H3_9STRA (Putative serine/threonine protein kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4H3_9STRA)

HSP 1 Score: 246 bits (627), Expect = 1.740e-77
Identity = 123/265 (46.42%), Postives = 177/265 (66.79%), Query Frame = 1 
Query:   37 KPGDIIDRYRILKLLGTGASGQVFLV---DDSGKQFAMKVVRLPDMHKTKTYTRLKREVEIMKRLDNERIVKLYRVLKGSTCIYLICEYVAGGDLFDKIALNNQLTETEARRYFRQIVEGMVYCHSQNISHRDIKPENIMITSCDDVKIADFGLSRIKTQTTV-VFDTFCGTLNYVAPELLAKRPYDS-KCDIWSLGIMLYVMLSGRFPYDSDDDEETAHMILDDQFTFPASIVDGNAKNLISQMLQKRPESRPTMIQVAAHQWL 816
            K GDII+ Y ++++LG+G+SG+V L    DD    FA+K++ L  +H+    T++KRE+  MK L +E IV+L+RVL G T +YL+CEYV+GGDL+DKIA    L ET AR+YF+QIV  + +CH   I+HRD+KPEN M+T   D+K+ADFGLS I +Q    +F T CGT +Y +PE+L++  Y+  + DIWS+G++LYVM+ G  P+D D  E     I   +F  PA  +   A++LI ++L   P  RPT+IQ+  H WL
Sbjct:    3 KVGDIIENYTVVRMLGSGSSGEVVLAHENDDRDTLFAIKIISLKHIHRNHLSTQIKREISAMKSLHHENIVRLFRVLNGGTKLYLVCEYVSGGDLYDKIAAMKSLPETLARKYFKQIVRAIQHCHENGITHRDLKPENCMVTEDGDIKVADFGLSNITSQQYGDMFFTVCGTPHYASPEVLSRVTYNGPQSDIWSMGVLLYVMVLGYLPFDDDLHEALRVKIKHAKFGLPAHTISSEAEDLIRRILVIDPTKRPTLIQILEHSWL 267
[Close]
BLAST of jgi.p|Trimin1|156979 vs. uniprot
Match: A0A835Z4Q1_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4Q1_9STRA)

HSP 1 Score: 229 bits (583), Expect = 4.830e-71
Identity = 116/261 (44.44%), Postives = 167/261 (63.98%), Query Frame = 1 
Query:   43 GDIIDRYRILKLLGTGASGQVFLVDD--SGKQFAMKVVRLPDMHKTKTYTRLKREVEIMKRLDNERIVKLYRVLKGSTCIYLICEYVAGGDLFDKIALNNQLTETEARRYFRQIVEGMVYCHSQNISHRDIKPENIMITSCDDVKIADFGLSRIKTQTTV-VFDTFCGTLNYVAPELLAKRPYDSK-CDIWSLGIMLYVMLSGRFPYDSDDDEETAHMILDDQFTFPASIVDGNAKNLISQMLQKRPESRPTMIQVAAHQW 813
            GDI + Y++ K LG G+SG+V L +D   G  +A+K++ +  +H      +LKRE + MK L +  IV L+RVLKG + ++L+CEYV GGDLFDKI   ++L E +A+RYF +IV  + +CH+  ISHRDIKPEN ++T  D +K+ DFGLS +K++    +F T CGT NY APE+L++  Y     DIWSLG++LYVML G  P+D +  E     I   +F+ P   +   A++LI+ +L   P SRP +  V AH W
Sbjct:    2 GDIFENYKVTKTLGIGSSGEVVLAEDCRDGSLYAVKIIPIQYIHTNHLSNQLKREKQAMKSLQHPNIVSLHRVLKGGSKLHLVCEYVPGGDLFDKIISQSRLPEEDAKRYFGEIVSAIAHCHASGISHRDIKPENCLMTHDDHIKVTDFGLSNVKSEYHEDMFYTVCGTPNYAAPEVLSRIKYKGPVADIWSLGVLLYVMLIGMLPFDEEAPEHLWSKIKHAEFSIPEDSISEEAEDLINMILVADPVSRPNLDAVLAHPW 262
[Close]
BLAST of jgi.p|Trimin1|156979 vs. uniprot
Match: A0A835ZE20_9STRA (Putative serine/threonine kinase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZE20_9STRA)

HSP 1 Score: 226 bits (575), Expect = 3.680e-70
Identity = 112/256 (43.75%), Postives = 170/256 (66.41%), Query Frame = 1 
Query:   61 YRILKLLGTGASGQVFLV---DDSGKQFAMKVVRLPDMHKTKTYTRLKREVEIMKRLDNERIVKLYRVLKGSTCIYLICEYVAGGDLFDKIALNNQLTETEARRYFRQIVEGMVYCHSQNISHRDIKPENIMITSCDDVKIADFGLSRIKTQTTV-VFDTFCGTLNYVAPELLAKRPYDSKC-DIWSLGIMLYVMLSGRFPYDSDDDEETAHMILDDQFTFPASIVDGNAKNLISQMLQKRPESRPTMIQVAAHQW 813
            Y ++++LGTG+SG+V L    D+  K FA+K++ L  +H+    T++KRE+ +MK L ++ IV+LYRVLKG + +YL+CEY++GGDLFDKI+    L E  A +YF QIV+ + YCH   I+HRD+KPEN M+T  D++K+ DFGLS I +Q    +F T CGT +Y +PE+L++  Y     DIWS+G++LYVML G  P+D D  E     I   +F  P + +   A++LI ++++  P  RP++ ++ AH W
Sbjct:    1 YTVIRMLGTGSSGEVVLARETDNPDKLFAIKIILLKYIHRNHLSTQIKREISVMKSLHHDNIVRLYRVLKGGSRLYLVCEYISGGDLFDKISGLTSLPEPLACKYFIQIVKAIQYCHDNGITHRDLKPENCMVTVDDEIKVTDFGLSNITSQKYGDMFFTVCGTPHYASPEVLSRVQYHGPLSDIWSIGVLLYVMLLGYLPFDDDLHEALRIKIKHAKFVIPKNSMSPEAEDLIRRIIKADPAKRPSLAEILAHDW 256
[Close]
BLAST of jgi.p|Trimin1|156979 vs. uniprot
Match: A0A836CFT3_9STRA (Kinase-like domain-containing protein n=4 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFT3_9STRA)

HSP 1 Score: 212 bits (539), Expect = 1.540e-64
Identity = 113/253 (44.66%), Postives = 164/253 (64.82%), Query Frame = 1 
Query:   76 LLGTGASGQVFLVDDSGKQ---FAMKVVRLPDMHKTKTYTRLKREVEIMKRLDNERIVKLYRVLKGSTCIYLICEYVAGGDLFDKIALNNQLTETEARRYFRQIVEGMVYCHSQNISHRDIKPENIMITSCDD-VKIADFGLSRIKTQTTV-VFDTFCGTLNYVAPELLAKRPYDSKC-DIWSLGIMLYVMLSGRFPYDSDDDEETAHMILDDQFTFPASIVDGNAKNLISQMLQKRPESRPTMIQVAAHQWL 816
            +LG G+SG+V LV ++      FA+K++ L  +H+    T++KRE+ +MK L ++ IV+LYRVLKG T +YL+CEYV+GGDL+DKIA    L E  A +YF QIV+ + +CH   I+HRD+KPEN M+T   + +K+ DFGLS I +Q    +F T CGT +Y +PE+L++  Y+    DIWSLGI+LYVML G  P+D D  E     I   +F  P   V   A++LI  ++   P  RP++ Q+ AH+W+
Sbjct:    1 MLGNGSSGEVVLVHETEHPEHLFAIKIISLKYIHRNHLSTQIKREISVMKSLHHDNIVRLYRVLKGGTKLYLVCEYVSGGDLYDKIANLPSLPEPLACKYFVQIVKAIQHCHDNGITHRDLKPENCMVTDDGEKIKVTDFGLSNITSQKYGDMFFTVCGTPHYASPEVLSRIQYNGPLSDIWSLGILLYVMLMGYLPFDDDLHEALRIKIKHAKFVIPRDTVSVEAEDLIRSIIIVDPTKRPSLEQILAHKWI 253
[Close]
BLAST of jgi.p|Trimin1|156979 vs. uniprot
Match: F4JQW5_ARATH (Non-specific serine/threonine protein kinase n=4 Tax=Brassicaceae TaxID=3700 RepID=F4JQW5_ARATH)

HSP 1 Score: 206 bits (523), Expect = 2.290e-60
Identity = 104/259 (40.15%), Postives = 166/259 (64.09%), Query Frame = 1 
Query:   52 IDRYRILKLLGTGASGQVFLVD--DSGKQFAMKVVRLPDMHKTKTYTRLKREVEIMKRLDNERIVKLYRVLKGSTCIYLICEYVAGGDLFDKIALNNQLTETEARRYFRQIVEGMVYCHSQNISHRDIKPENIMITSCDDVKIADFGLSRIKTQTTVVFDTFCGTLNYVAPELLAKRPYDSK-CDIWSLGIMLYVMLSGRFPYDSDDDEETAHMILDDQFTFPASIVDGNAKNLISQMLQKRPESRPTMIQVAAHQWLL 819
            + +Y + + +G G   +V      ++G+  AMK+V    + K K   ++KRE+ IMK + +  +V+LY VL   T IY+I EY+ GG+LFDKI  N +L+E+EAR+YF Q+++G+ YCHS+ + HRD+KPEN+++ S  ++KI+DFGLS +  Q   +  T CGT NYVAPE+L+ + Y+    DIWS G++LYV+++G  P+D  D       I   +F+ P+    G AK+LI+++L   PE+R T+ ++   +W L
Sbjct:    6 VGKYELGRTIGEGTFAKVKFAQNTETGESVAMKIVDRSTIIKRKMVDQIKREISIMKLVRHPCVVRLYEVLASRTKIYIILEYITGGELFDKIVRNGRLSESEARKYFHQLIDGVDYCHSKGVYHRDLKPENLLLDSQGNLKISDFGLSALPEQGVTILKTTCGTPNYVAPEVLSHKGYNGAVADIWSCGVILYVLMAGYLPFDEMDLPTLYSKIDKAEFSCPSYFALG-AKSLINRILDPNPETRITIAEIRKDEWFL 263
[Close]
BLAST of jgi.p|Trimin1|156979 vs. uniprot
Match: CIPK8_ARATH (CBL-interacting serine/threonine-protein kinase 8 n=27 Tax=Brassicaceae TaxID=3700 RepID=CIPK8_ARATH)

HSP 1 Score: 206 bits (523), Expect = 4.660e-60
Identity = 104/259 (40.15%), Postives = 166/259 (64.09%), Query Frame = 1 
Query:   52 IDRYRILKLLGTGASGQVFLVD--DSGKQFAMKVVRLPDMHKTKTYTRLKREVEIMKRLDNERIVKLYRVLKGSTCIYLICEYVAGGDLFDKIALNNQLTETEARRYFRQIVEGMVYCHSQNISHRDIKPENIMITSCDDVKIADFGLSRIKTQTTVVFDTFCGTLNYVAPELLAKRPYDSK-CDIWSLGIMLYVMLSGRFPYDSDDDEETAHMILDDQFTFPASIVDGNAKNLISQMLQKRPESRPTMIQVAAHQWLL 819
            + +Y + + +G G   +V      ++G+  AMK+V    + K K   ++KRE+ IMK + +  +V+LY VL   T IY+I EY+ GG+LFDKI  N +L+E+EAR+YF Q+++G+ YCHS+ + HRD+KPEN+++ S  ++KI+DFGLS +  Q   +  T CGT NYVAPE+L+ + Y+    DIWS G++LYV+++G  P+D  D       I   +F+ P+    G AK+LI+++L   PE+R T+ ++   +W L
Sbjct:    6 VGKYELGRTIGEGTFAKVKFAQNTETGESVAMKIVDRSTIIKRKMVDQIKREISIMKLVRHPCVVRLYEVLASRTKIYIILEYITGGELFDKIVRNGRLSESEARKYFHQLIDGVDYCHSKGVYHRDLKPENLLLDSQGNLKISDFGLSALPEQGVTILKTTCGTPNYVAPEVLSHKGYNGAVADIWSCGVILYVLMAGYLPFDEMDLPTLYSKIDKAEFSCPSYFALG-AKSLINRILDPNPETRITIAEIRKDEWFL 263
[Close]
BLAST of jgi.p|Trimin1|156979 vs. uniprot
Match: UPI000A29C76A (CBL-interacting serine/threonine-protein kinase 8 isoform X2 n=4 Tax=Camelineae TaxID=980083 RepID=UPI000A29C76A)

HSP 1 Score: 203 bits (516), Expect = 2.520e-59
Identity = 103/259 (39.77%), Postives = 164/259 (63.32%), Query Frame = 1 
Query:   52 IDRYRILKLLGTGASGQVFLVD--DSGKQFAMKVVRLPDMHKTKTYTRLKREVEIMKRLDNERIVKLYRVLKGSTCIYLICEYVAGGDLFDKIALNNQLTETEARRYFRQIVEGMVYCHSQNISHRDIKPENIMITSCDDVKIADFGLSRIKTQTTVVFDTFCGTLNYVAPELLAKRPYDSK-CDIWSLGIMLYVMLSGRFPYDSDDDEETAHMILDDQFTFPASIVDGNAKNLISQMLQKRPESRPTMIQVAAHQWLL 819
            + +Y + + +G G   +V      ++G+  AMK+V    + K K   ++KRE+ IMK + +  +V+LY VL   T IY+I EY+ GG+LFDKI  N +L E+EAR+YF+Q+++G+ YCHS+ + HRD+KPEN+++ S  ++KI+DFGLS +  Q   +  T CGT NYVAPE+L+ + Y+    D+WS G++LYV+++G  P+D  D       I    F  P+    G AK+LI+++L   PE+R T+ ++   +W L
Sbjct:    6 VGKYELGRTIGEGTFAKVKFAQNTETGESVAMKIVDRSTIIKRKMVDQIKREISIMKLVRHPCVVRLYEVLASRTKIYIILEYITGGELFDKIVRNGRLGESEARKYFQQLIDGVDYCHSKGVYHRDLKPENLLLDSQGNLKISDFGLSALPEQGVTILKTTCGTPNYVAPEVLSHKGYNGAVADVWSCGVILYVLMAGYLPFDEMDLPTLYSKIDRADFACPSYFALG-AKSLINRILDPNPETRITIAEIRKDEWFL 263
[Close]
BLAST of jgi.p|Trimin1|156979 vs. uniprot
Match: A0A061FF55_THECC (CBL-interacting protein kinase 8 isoform 4 n=2 Tax=Pentapetalae TaxID=1437201 RepID=A0A061FF55_THECC)

HSP 1 Score: 199 bits (505), Expect = 9.760e-59
Identity = 102/257 (39.69%), Postives = 165/257 (64.20%), Query Frame = 1 
Query:   52 IDRYRILKLLGTGASGQVFLVD--DSGKQFAMKVVRLPDMHKTKTYTRLKREVEIMKRLDNERIVKLYRVLKGSTCIYLICEYVAGGDLFDKIALNNQLTETEARRYFRQIVEGMVYCHSQNISHRDIKPENIMITSCDDVKIADFGLSRIKTQTTVVFDTFCGTLNYVAPELLAKRPYDSK-CDIWSLGIMLYVMLSGRFPYDSDDDEETAHMILDDQFTFPASIVDGNAKNLISQMLQKRPESRPTMIQVAAHQW 813
            + +Y I + +G G   +V      ++G+  AMKV+    + K K   ++KRE+ IMK + +  +V+L+ V+   T IY+I E++ GG+LFDKI  N +L+E EARRYF+Q+++G+ YCHS+ + HRD+KPEN+++ S  ++KI+DFGLS +  Q   +  T CGT NYVAPE+L+ + YD    D+WS G++LYV+++G  P+D  D       I   +F+ P+    G AK+LI ++L   P++R T+ Q+ + +W
Sbjct:    6 VGKYEIGRTIGEGTFAKVKFAQNTETGESVAMKVLDRSTIIKHKMVDQIKREISIMKLVRHPYVVRLHEVIASRTKIYIILEFITGGELFDKIVHNGRLSEAEARRYFQQLIDGVEYCHSKGVYHRDLKPENLLLDSQGNLKISDFGLSALPEQGVSLLRTTCGTPNYVAPEVLSHKGYDGAVADVWSCGVILYVLMAGYLPFDELDLTTLYSKIERAEFSCPSWFPVG-AKSLIHRILDPNPQTRITIEQIRSDEW 261
[Close]
BLAST of jgi.p|Trimin1|156979 vs. uniprot
Match: A0A8B9AUZ8_PHODC (Non-specific serine/threonine protein kinase n=3 Tax=Phoenix dactylifera TaxID=42345 RepID=A0A8B9AUZ8_PHODC)

HSP 1 Score: 200 bits (509), Expect = 3.810e-58
Identity = 103/257 (40.08%), Postives = 163/257 (63.42%), Query Frame = 1 
Query:   52 IDRYRILKLLGTGASGQVFLVD--DSGKQFAMKVVRLPDMHKTKTYTRLKREVEIMKRLDNERIVKLYRVLKGSTCIYLICEYVAGGDLFDKIALNNQLTETEARRYFRQIVEGMVYCHSQNISHRDIKPENIMITSCDDVKIADFGLSRIKTQTTVVFDTFCGTLNYVAPELLAKRPYDSK-CDIWSLGIMLYVMLSGRFPYDSDDDEETAHMILDDQFTFPASIVDGNAKNLISQMLQKRPESRPTMIQVAAHQW 813
            + +Y + + +G G   +V      +SG+  AMKV+    + K K   ++KRE+ IMK + +  +V+LY VL   T IY+I E++ GG+LFDKI  + +L+E +ARRYF+Q+V+G+ YCHS+ + HRD+KPEN+++ S  ++KI+DFGLS +  Q   +  T CGT NYVAPE+L+ + YD    D WS G++LYV+++G  P+D  D     + I   +F+ P+    G AK+LI ++L   P SR  + ++  H+W
Sbjct:    6 VGKYEVGRTIGAGTFAKVKFAQNTESGESVAMKVLDRATIIKHKMVDQIKREIFIMKLVRHPHVVRLYEVLASRTKIYIILEFITGGELFDKIVHHGKLSEADARRYFQQLVDGVDYCHSKGVYHRDLKPENLLLDSQGNLKISDFGLSAVSAQGVSLLHTTCGTPNYVAPEVLSHKGYDGAVADTWSCGVILYVLMAGYLPFDEVDLTTLYNKIEKAEFSCPSWFSVG-AKSLIHRILDPNPASRIRIEEIRCHEW 261
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|156979 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CIG8_9STRA4.250e-198100.00Putative serine/threonine kinase-like protein n=1 ... [more]
A0A835Z4H3_9STRA1.740e-7746.42Putative serine/threonine protein kinase n=1 Tax=T... [more]
A0A835Z4Q1_9STRA4.830e-7144.44Kinase-like domain-containing protein n=1 Tax=Trib... [more]
A0A835ZE20_9STRA3.680e-7043.75Putative serine/threonine kinase (Fragment) n=1 Ta... [more]
A0A836CFT3_9STRA1.540e-6444.66Kinase-like domain-containing protein n=4 Tax=Trib... [more]
F4JQW5_ARATH2.290e-6040.15Non-specific serine/threonine protein kinase n=4 T... [more]
CIPK8_ARATH4.660e-6040.15CBL-interacting serine/threonine-protein kinase 8 ... [more]
UPI000A29C76A2.520e-5939.77CBL-interacting serine/threonine-protein kinase 8 ... [more]
A0A061FF55_THECC9.760e-5939.69CBL-interacting protein kinase 8 isoform 4 n=2 Tax... [more]
A0A8B9AUZ8_PHODC3.810e-5840.08Non-specific serine/threonine protein kinase n=3 T... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_2contigContig_2:1527667..1528488 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|156979|e_gw1.2.161.1
BRITEko00000,ko00001,ko01000,ko01001,ko03029,ko04131
KEGG Pathwayko04068,ko04140,ko04150,ko04151,ko04152,ko04211,ko04213,ko04371,ko04530,ko04710,ko04714,ko04910,ko04920,ko04921,ko04922,ko04931,ko04932,ko05410,ko05418,map04068,map04140,map04150,map04151,map04152,map04211,map04213,map04371,map04530,map04710,map04714,map04910,map04920,map04921,map04922,map04931,map04932,map05410,map05418
KEGG koko:K07198
EC2.7.11.11
GOsGO:0001101,GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005886,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0007154,GO:0007165,GO:0007275,GO:0008150,GO:0008152,GO:0009743,GO:0009746,GO:0009749,GO:0009987,GO:0010033,GO:0010035,GO:0010167,GO:0016020,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019538,GO:0022622,GO:0023052,GO:0032501,GO:0032502,GO:0034284,GO:0035556,GO:0036211,GO:0042221,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0046777,GO:0048364,GO:0048731,GO:0048856,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0065007,GO:0071704,GO:0071944,GO:0099402,GO:0140096,GO:1901564,GO:1901698,GO:1901700
Preferred nameCIPK8
DescriptionCBL-interacting serine threonine-protein kinase
COG categoryT
Max annot lvl35493|Streptophyta
EggNOG OGsKOG0583@1|root,KOG0583@2759|Eukaryota,37I6U@33090|Viridiplantae,3GAMQ@35493|Streptophyta,3HZDI@3699|Brassicales
Evalue7.63e-61
Seed ortholog3702.AT4G24400.1
Hectar predicted targeting categoryother localisation
TranscriptId157301
TrackFilteredModels1
ProteinId156979
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|156979gene_822Tribonema minus UTEX_B_3156 geneContig_2 1527667..1528488 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_822_1exon_822_1Tribonema minus UTEX_B_3156 exonContig_2 1527667..1528488 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_822CDS_822Tribonema minus UTEX_B_3156 CDSContig_2 1527667..1528488 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|156979Trimin1|156979|e_gw1.2.161.1Tribonema minus UTEX_B_3156 polypeptideContig_2 1527667..1528488 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_822 ID=mRNA_822|Name=jgi.p|Trimin1|156979|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=822bp|location=Sequence derived from alignment at Contig_2:1527667..1528488+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGAACAGACAAGAGAGCAGGGACACATGTAAAATTAAGCCAGGCGATAT
TATTGACAGGTATCGTATCTTGAAACTGCTCGGAACAGGCGCATCGGGTC
AAGTGTTTCTGGTGGACGACAGCGGTAAACAGTTTGCTATGAAGGTCGTC
AGGCTGCCAGATATGCATAAGACTAAAACTTACACCAGACTGAAGCGCGA
GGTTGAGATCATGAAGCGCCTTGACAACGAGCGCATCGTGAAATTGTACA
GAGTACTGAAAGGCAGCACATGCATTTACTTGATATGCGAGTACGTCGCG
GGAGGCGATCTGTTTGACAAGATCGCCTTGAACAATCAACTGACAGAGAC
AGAAGCCAGGCGTTACTTTAGGCAGATTGTTGAGGGCATGGTGTATTGTC
ATTCTCAAAACATTTCGCATAGGGATATAAAACCGGAAAACATCATGATC
ACATCTTGCGATGACGTCAAGATTGCAGATTTCGGCCTGAGCCGCATCAA
GACCCAAACGACTGTGGTGTTTGACACATTCTGCGGCACTTTGAACTATG
TAGCTCCAGAATTGCTCGCCAAGAGACCATATGACTCCAAATGCGACATT
TGGAGCCTGGGCATCATGCTGTATGTCATGCTATCGGGCAGGTTCCCATA
CGACTCTGACGACGATGAAGAAACGGCGCACATGATTCTAGACGATCAAT
TCACTTTCCCTGCTTCCATTGTAGATGGTAATGCTAAGAATCTAATTAGC
CAAATGCTTCAAAAGCGTCCTGAGTCAAGGCCTACCATGATCCAGGTCGC
AGCGCACCAGTGGCTACTGTAG
back to top

protein sequence of jgi.p|Trimin1|156979

>Trimin1|156979|e_gw1.2.161.1 ID=Trimin1|156979|e_gw1.2.161.1|Name=jgi.p|Trimin1|156979|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=274bp
MNRQESRDTCKIKPGDIIDRYRILKLLGTGASGQVFLVDDSGKQFAMKVV
RLPDMHKTKTYTRLKREVEIMKRLDNERIVKLYRVLKGSTCIYLICEYVA
GGDLFDKIALNNQLTETEARRYFRQIVEGMVYCHSQNISHRDIKPENIMI
TSCDDVKIADFGLSRIKTQTTVVFDTFCGTLNYVAPELLAKRPYDSKCDI
WSLGIMLYVMLSGRFPYDSDDDEETAHMILDDQFTFPASIVDGNAKNLIS
QMLQKRPESRPTMIQVAAHQWLL*
back to top

mRNA from alignment at Contig_2:1527667..1528488+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_822 ID=mRNA_822|Name=jgi.p|Trimin1|156979|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=822bp|location=Sequence derived from alignment at Contig_2:1527667..1528488+ (Tribonema minus UTEX_B_3156 )
ATGAACAGACAAGAGAGCAGGGACACATGTAAAATTAAGCCAGGCGATAT
TATTGACAGGTATCGTATCTTGAAACTGCTCGGAACAGGCGCATCGGGTC
AAGTGTTTCTGGTGGACGACAGCGGTAAACAGTTTGCTATGAAGGTCGTC
AGGCTGCCAGATATGCATAAGACTAAAACTTACACCAGACTGAAGCGCGA
GGTTGAGATCATGAAGCGCCTTGACAACGAGCGCATCGTGAAATTGTACA
GAGTACTGAAAGGCAGCACATGCATTTACTTGATATGCGAGTACGTCGCG
GGAGGCGATCTGTTTGACAAGATCGCCTTGAACAATCAACTGACAGAGAC
AGAAGCCAGGCGTTACTTTAGGCAGATTGTTGAGGGCATGGTGTATTGTC
ATTCTCAAAACATTTCGCATAGGGATATAAAACCGGAAAACATCATGATC
ACATCTTGCGATGACGTCAAGATTGCAGATTTCGGCCTGAGCCGCATCAA
GACCCAAACGACTGTGGTGTTTGACACATTCTGCGGCACTTTGAACTATG
TAGCTCCAGAATTGCTCGCCAAGAGACCATATGACTCCAAATGCGACATT
TGGAGCCTGGGCATCATGCTGTATGTCATGCTATCGGGCAGGTTCCCATA
CGACTCTGACGACGATGAAGAAACGGCGCACATGATTCTAGACGATCAAT
TCACTTTCCCTGCTTCCATTGTAGATGGTAATGCTAAGAATCTAATTAGC
CAAATGCTTCAAAAGCGTCCTGAGTCAAGGCCTACCATGATCCAGGTCGC
AGCGCACCAGTGGCTACTGTAG
back to top

Coding sequence (CDS) from alignment at Contig_2:1527667..1528488+

>mRNA_822 ID=mRNA_822|Name=jgi.p|Trimin1|156979|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=822bp|location=Sequence derived from alignment at Contig_2:1527667..1528488+ (Tribonema minus UTEX_B_3156 )
ATGAACAGACAAGAGAGCAGGGACACATGTAAAATTAAGCCAGGCGATAT
TATTGACAGGTATCGTATCTTGAAACTGCTCGGAACAGGCGCATCGGGTC
AAGTGTTTCTGGTGGACGACAGCGGTAAACAGTTTGCTATGAAGGTCGTC
AGGCTGCCAGATATGCATAAGACTAAAACTTACACCAGACTGAAGCGCGA
GGTTGAGATCATGAAGCGCCTTGACAACGAGCGCATCGTGAAATTGTACA
GAGTACTGAAAGGCAGCACATGCATTTACTTGATATGCGAGTACGTCGCG
GGAGGCGATCTGTTTGACAAGATCGCCTTGAACAATCAACTGACAGAGAC
AGAAGCCAGGCGTTACTTTAGGCAGATTGTTGAGGGCATGGTGTATTGTC
ATTCTCAAAACATTTCGCATAGGGATATAAAACCGGAAAACATCATGATC
ACATCTTGCGATGACGTCAAGATTGCAGATTTCGGCCTGAGCCGCATCAA
GACCCAAACGACTGTGGTGTTTGACACATTCTGCGGCACTTTGAACTATG
TAGCTCCAGAATTGCTCGCCAAGAGACCATATGACTCCAAATGCGACATT
TGGAGCCTGGGCATCATGCTGTATGTCATGCTATCGGGCAGGTTCCCATA
CGACTCTGACGACGATGAAGAAACGGCGCACATGATTCTAGACGATCAAT
TCACTTTCCCTGCTTCCATTGTAGATGGTAATGCTAAGAATCTAATTAGC
CAAATGCTTCAAAAGCGTCCTGAGTCAAGGCCTACCATGATCCAGGTCGC
AGCGCACCAGTGGCTACTGTAG
back to top