mRNA_8209 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|350000
Unique NamemRNA_8209
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|350000 vs. uniprot
Match: A0A835YY83_9STRA (Putative serine esterase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YY83_9STRA)

HSP 1 Score: 584 bits (1506), Expect = 1.160e-210
Identity = 292/292 (100.00%), Postives = 292/292 (100.00%), Query Frame = 1
Query:    1 MAYLGTQIDSRYGADSYVYLSEANAGPFKTLDGIDEGGSRFFEEVMNLVERPMLRTARKISFVAHGIGGLYVRFALKRLYERGVLGGRLSPINFITFGTPHLGTLTSAAGVMGALIEGRTSAQLKLKDGDERFGRPPLLVEMCNREYVAALGRFAVRKLYANVRFDSMELYSASIRLDDPYMGLSDMQLAARITPQYTHVLVDAEDHAAANAGAGQQQRQVVAPFRPQLAGQLSDRRIWEDGAQALMDIGWLRVDIYNPKGLSPHKDLVVATVWLNKEGMDIVRHCVDTALT 876
            MAYLGTQIDSRYGADSYVYLSEANAGPFKTLDGIDEGGSRFFEEVMNLVERPMLRTARKISFVAHGIGGLYVRFALKRLYERGVLGGRLSPINFITFGTPHLGTLTSAAGVMGALIEGRTSAQLKLKDGDERFGRPPLLVEMCNREYVAALGRFAVRKLYANVRFDSMELYSASIRLDDPYMGLSDMQLAARITPQYTHVLVDAEDHAAANAGAGQQQRQVVAPFRPQLAGQLSDRRIWEDGAQALMDIGWLRVDIYNPKGLSPHKDLVVATVWLNKEGMDIVRHCVDTALT
Sbjct:    1 MAYLGTQIDSRYGADSYVYLSEANAGPFKTLDGIDEGGSRFFEEVMNLVERPMLRTARKISFVAHGIGGLYVRFALKRLYERGVLGGRLSPINFITFGTPHLGTLTSAAGVMGALIEGRTSAQLKLKDGDERFGRPPLLVEMCNREYVAALGRFAVRKLYANVRFDSMELYSASIRLDDPYMGLSDMQLAARITPQYTHVLVDAEDHAAANAGAGQQQRQVVAPFRPQLAGQLSDRRIWEDGAQALMDIGWLRVDIYNPKGLSPHKDLVVATVWLNKEGMDIVRHCVDTALT 292          
BLAST of jgi.p|Trimin1|350000 vs. uniprot
Match: D7G8V8_ECTSI (Fibronectin type-III domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8V8_ECTSI)

HSP 1 Score: 223 bits (569), Expect = 5.930e-65
Identity = 132/354 (37.29%), Postives = 185/354 (52.26%), Query Frame = 1
Query:    1 MAYLGTQIDSRYGADSYVYLSEANAGPFKTLDGIDEGGSRFFEEVMNLVERPMLRTARKISFVAHGIGGLYVRFALKRLYERGVLGGRLSPINFITFGTPHLGTLTSAAGVMGALIEGRTSAQLKLKDGD------------ERFG--------------------------------------------RPPLLVEMCNREYVAALGRFAVRKLYANVRFD-SMELYSASIRLDDPYMGLSDMQLAARITPQYTHVLVDAE-------DHAAANAGAGQQQRQVVAPFRPQLAGQLSDRRIWEDGAQALMDIGWLRVDIYNPKGLSPHKDLVVATVWLNKEGMDIVRHCVDTA 870
            M YL   I SR+G+ ++V ++  N  PFKTLDG+ +GG+R +EEVM  ++   + +A  ISF+ HG+GG+Y R+AL+ L + GV   R+S ++FIT GTPHLG+L S  G+ G +++  T  QL  KD D            E +G                                            RPP+L  M   +++A L  F  R LYANV+ D ++E  SAS+R+DDPY+ + D  L+   +P YTHV+ ++        D A A    G         F   LA    +  +WE  AQ L  +GW RVDI+NP+G+SP+KDLVV   WLN EG DIVRH VD +
Sbjct:  204 MKYLANSISSRHGSSAHVKIAMCNTAPFKTLDGVAKGGTRLYEEVMQTIDG--VPSASYISFIGHGLGGVYARYALRLLNDAGVFSDRVSGMHFITLGTPHLGSLLSGGGMAGRVMDNETKEQLFFKDTDMRRDGDNGGVSREEYGVGGSAGAGGARGGGSGYYPGAPPSYMGAEGVGRNMNSNHSLGGSRPPVLARMTGEDFLAPLRMFQRRVLYANVKMDGTVEYPSASVRIDDPYVYVPDTDLSRMCSPHYTHVMANSSKGNLGGMDPAVARGPGG--------GFPTALASSAPESGMWEIMAQVLDSLGWERVDIFNPEGMSPYKDLVVVNQWLNSEGTDIVRHLVDNS 547          
BLAST of jgi.p|Trimin1|350000 vs. uniprot
Match: A0A6H5KZX8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZX8_9PHAE)

HSP 1 Score: 127 bits (318), Expect = 4.070e-31
Identity = 71/164 (43.29%), Postives = 95/164 (57.93%), Query Frame = 1
Query:  403 RPPLLVEMCNREYVAALGRFAVRKLYANVRFD-SMELYSASIRLDDPYMGLSDMQLAARITPQYTHVLVDAE-------DHAAANAGAGQQQRQVVAPFRPQLAGQLSDRRIWEDGAQALMDIGWLRVDIYNPKGLSPHKDLVVATVWLNKEGMDIVRHCVDTA 870
            RPP+L  M   +++A L  F  R LYANV+ D ++E  SAS+R+DDPY+ + D  L+   +P YTHV+ ++        D A A    G         F   LA    +  +WE  AQ L  +GW RVDI+NP+G+SP+KDLVV   WLN EG DIVRH VD +
Sbjct:   81 RPPVLARMTGEDFLAPLRMFQRRVLYANVKMDGTVEYPSASVRIDDPYVYVPDTDLSRMCSPHYTHVMANSSKGNLGGMDPAVARGPGG--------GFPTALASAAPESGMWEIMAQVLDSLGWERVDIFNPEGMSPYKDLVVVNQWLNSEGTDIVRHLVDNS 236          
BLAST of jgi.p|Trimin1|350000 vs. uniprot
Match: A0A6D2L6X3_9BRAS (DUF676 domain-containing protein n=5 Tax=Coluteocarpeae TaxID=1394505 RepID=A0A6D2L6X3_9BRAS)

HSP 1 Score: 127 bits (320), Expect = 2.500e-30
Identity = 105/321 (32.71%), Postives = 158/321 (49.22%), Query Frame = 1
Query:   10 LGTQIDSRYGADSYV---------YLSEANAGPFKTLDGIDEGGSRFFEEVMNLVERPMLRTARKISFVAHGIGGLYVRFALKRLYER-GVLGGRLSPINFITFGTPHLGT--------------LTSAAGVMGALIEGRTSAQLKLKDGDERFGRPPLLVEMC----NREYVAALGRFAVRKLYANVRFDSMELY-SASIR----LDDPYMGLSDMQLAARITPQYTHVLVDAEDHAAANAGAGQQQRQVVAPFRPQLAGQLSDRRIWEDGAQALMDIGWLRVDI--YNPKG-LSPHKDLVVATVWLNKEGMDIVRHCVD 864
            +G+  D +Y A+ +V         + SE+N+    T DG+D+ G R   EV+++++       RKISFVAH +GGL  R+A+ +LYE+ G + G L PINFITF TPHLG+              L   A     L  GRT   L L D D+  G+PPLL+ M     + ++++AL  F  R  YANV FD M  + ++SIR    L +P +  +D        P Y H++   + +   + G+ Q    VV               + E+    L  + W RVD+  +N K   + H  + V T WL+ +G D+V H +D
Sbjct:  104 IGSSADWKYAAEQFVKKFPDKVLVHRSESNSATL-TFDGVDKMGERLANEVVSVIKHR--NGLRKISFVAHSLGGLVARYAIGKLYEQPGEIAG-LEPINFITFATPHLGSRGHRQFPILCGLPFLERKASETAHLAAGRTGKHLFLVDKDD--GKPPLLIRMATDSDDLKFISALHAFKRRVAYANVNFDYMVGWRTSSIRRPNELPEPNLLATD--------PSYPHIVYVEQGNV--DNGSCQSTSTVVTTDE--------SNDLEEEMLHGLGQLSWERVDVSFHNSKQRYAAHSTIQVKTYWLHSDGKDVVFHMMD 400          
BLAST of jgi.p|Trimin1|350000 vs. uniprot
Match: A0A068UWL3_COFCA (DUF676 domain-containing protein n=5 Tax=Coffea TaxID=13442 RepID=A0A068UWL3_COFCA)

HSP 1 Score: 124 bits (312), Expect = 8.350e-29
Identity = 100/329 (30.40%), Postives = 150/329 (45.59%), Query Frame = 1
Query:    4 AYLGTQIDSRYGADSYVYLSEANAGPFKTLDGIDEGGSRFFEEVMNLVERPMLRTARKISFVAHGIGGLYVRFALKRLYE--------------RGVLGGRLSPINFITFGTPHLGT--------------LTSAAGVMGALIEGRTSAQLKLKDGDERFGRPPLLVEMCNR----EYVAALGRFAVRKLYANVRFDSMELY-SASIRLDD-----PYMGLSDMQLAARITPQYTHVLVDAEDHAAANAGAGQQQRQVVAPFRPQLAGQLSDRRIWEDGA-QALMDIGWLRVDIYNPKGLSP---HKDLVVATVWLNKEGMDIVRHCVD 864
            AY+  ++  R G +  +Y S  N+   KT  GID  G R  +EVM +V +    T +KISFVAH +GGL+ R+A+  LY               +G++ G L PINFIT  TPHLG               L   A  +  +  GRT +QL L DG  +  +PPLL+ M +     ++++ALG F  R LYANV +D M  + ++SIR +      P   L   Q    +  +Y   +  +  H    A   ++     A   P +   L    I E+   + L  +GW +VD+       P   H ++ V   W +  G  ++ H  D
Sbjct:  137 AYVEAELKKRLGRNFLIYASSCNSYT-KTFTGIDGAGKRLADEVMQVVRKQ--ETLKKISFVAHSLGGLFARYAISVLYTPNNSGHPYDLSASTKGLIAG-LEPINFITLATPHLGVRGNKQLPFLLGVPFLEKIAAPLAPIFIGRTGSQLFLTDG--KPNKPPLLLRMASDCEDGKFISALGAFRCRVLYANVSYDHMVGWRTSSIRRETELVKPPQRSLDGYQHVVDV--EYCPPVSSSSPHFPPEAAKAKE----AAQNAPTMQNTLEYHEIVEEEMIRGLQQLGWKKVDVSFHSAFWPFFAHNNIHVKNEWFHNAGAGVIAHVAD 453          
BLAST of jgi.p|Trimin1|350000 vs. uniprot
Match: A0A087GGT4_ARAAL (DUF676 domain-containing protein n=2 Tax=Arabis TaxID=50451 RepID=A0A087GGT4_ARAAL)

HSP 1 Score: 123 bits (308), Expect = 1.020e-28
Identity = 106/332 (31.93%), Postives = 153/332 (46.08%), Query Frame = 1
Query:   10 LGTQIDSRYGADSYV---------YLSEANAGPFKTLDGIDEGGSRFFEEVMNLVERPMLRTARKISFVAHGIGGLYVRFALKRLYER------------GVLGGRLSPINFITFGTPHLGT--------------LTSAAGVMGALIEGRTSAQLKLKDGDERFGRPPLLVEMC----NREYVAALGRFAVRKLYANVRFDSMELY-SASIR----LDDPYMGLSDMQLAARITPQYTHVLVDAEDHAAANAGAGQQQRQVVAPFRPQLAGQLSDRRIWEDGAQALMDIGWLRVDI--YNPKG-LSPHKDLVVATVWLNKEGMDIVRHCVD 864
            +G+  D +Y A+ +V         + SE+N     T DG+D  G R   EV+++++       +KISFVAH +GGL  R+A+ +LY++            G + G L PINFITF TPHLG               L   A     L  GRT   L L D D+  G PPLL+ M     + ++++AL  F  R  YANV FD M  + ++SIR    L  P +  +D        P Y H++    +H   N G+ Q    VV      L  ++ D          L  + W RVD+  +N K     H  + V T WL+ +G D+V H +D
Sbjct:   79 IGSSADWKYAAEQFVNKFPDKVLVHRSESNCATL-TFDGVDMMGQRLANEVLSVIKHRS--GLKKISFVAHSLGGLVARYAIGKLYQQPNSLDSPSKAKGGEIAG-LEPINFITFATPHLGVRGHRQFPILCGLPFLERTASQTAHLAAGRTGKHLFLVDNDD--GNPPLLIRMATDSGDLKFISALHAFKRRVAYANVNFDYMVGWRTSSIRRPSELPKPNLLATD--------PNYPHIVY--VEHGNVNNGSCQSTSTVVTEENTDLEEEMID---------GLGQLPWERVDVSFHNSKQRYVAHNTIQVKTYWLHSDGKDVVFHMMD 385          
BLAST of jgi.p|Trimin1|350000 vs. uniprot
Match: V4P5F5_EUTSA (DUF676 domain-containing protein n=2 Tax=Eutrema salsugineum TaxID=72664 RepID=V4P5F5_EUTSA)

HSP 1 Score: 123 bits (308), Expect = 1.490e-28
Identity = 107/337 (31.75%), Postives = 153/337 (45.40%), Query Frame = 1
Query:   10 LGTQIDSRYGADSYV---------YLSEANAGPFKTLDGIDEGGSRFFEEVMNLVERPMLRTARKISFVAHGIGGLYVRFALKRLYE--------------RGVLGGR---LSPINFITFGTPHLGT--------------LTSAAGVMGALIEGRTSAQLKLKDGDERFGRPPLLVEMC----NREYVAALGRFAVRKLYANVRFDSMELY-SASIR----LDDPYMGLSDMQLAARITPQYTHVLVDAEDHAAANAGAGQQQRQVVAPFRPQLAGQLSDRRIWEDGAQALMDIGWLRVDI--YNPKG-LSPHKDLVVATVWLNKEGMDIVRHCVD 864
            +G+  D +Y A+ +V         + SE+N+    T DG+D  G R   EV+++++       RKISFVAH +GGL  R+A+ +LYE              + V GG    L P+NFITF TPHLG+              L   A     L  GRT   L L D D+  G PPLL+ M     N ++++AL  F  R  YANV FD M  + ++SIR    L  P +  +D        P Y H++    +H   + G+ Q     V      L          E+    L  + W RVD+  +N K     H  + V T WL+ +G D+V H +D
Sbjct:   99 IGSSADWKYAAEQFVKKFPDKVLVHRSESNSATM-TFDGVDMMGERLASEVLSVIKNRS--GLRKISFVAHSLGGLVARYAIGKLYEQLGEANSLESPSKAKSVTGGEIAGLEPMNFITFATPHLGSRGHRQFPILCGLPFLERTASQTAHLAAGRTGKHLFLVDNDD--GHPPLLIRMATDSDNLKFISALHAFKRRVAYANVNFDYMVGWRTSSIRRPNELPKPNLLATD--------PNYPHIVY--VEHGNVDNGSCQITSTAVTDENTDLE---------EEMIHGLAQLSWERVDVSFHNSKQRYVAHNTIQVKTYWLHSDGKDVVFHMMD 411          
BLAST of jgi.p|Trimin1|350000 vs. uniprot
Match: UPI00053F3B50 (uncharacterized protein LOC104900483 isoform X1 n=2 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=UPI00053F3B50)

HSP 1 Score: 122 bits (305), Expect = 6.060e-28
Identity = 102/333 (30.63%), Postives = 153/333 (45.95%), Query Frame = 1
Query:    7 YLGTQIDSRYGADSYVYLSEANAGPFKTLDGIDEGGSRFFEEVMNLVERPMLRTARKISFVAHGIGGLYVRFALKRLY------------------ERGVLGGRLSPINFITFGTPHLGT--------------LTSAAGVMGALIEGRTSAQLKLKDGDERFGRPPLLVEMC----NREYVAALGRFAVRKLYANVRFDSMELY-SASIRLDDPYMGLSDMQLAARITPQYTHVLVDAE-----DHAAANAGAGQQQRQVVAPFRPQLAGQLSDRRIWEDGA-QALMDIGWLRVDIYNPKGLSP---HKDLVVATVWLNKEGMDIVRHCVDT 867
            Y   ++  R G +  +Y S +N+   KT  GID  G R  EEV  +V+R    + +KISF+AH +GGL+ R+A+  LY                  + GV+ G L PINFIT  +PHLG               L   A  + ++  GRT +QL L DG  +  RPPLL++M     + ++++ALG F  R +YANV FD M  + ++SIR +D         L       Y HV VD E         A+      + +  A   P     +    + E+   Q L  +GW +VD+     + P   H ++ V   W +  G  +V+H  D+
Sbjct:  115 YFEAELKKRLGRNFLIYASSSNSYT-KTFGGIDGAGKRLAEEVRQIVQRT--ESLKKISFLAHSLGGLFARYAVAVLYTPNNLGDGDIDDTLGRSMKHGVIAG-LEPINFITLASPHLGVRGRKQLPLLWGLPFLEKLAPPLASVFVGRTGSQLFLTDG--KPNRPPLLLKMATDCEDGKFISALGAFKCRIIYANVSFDHMVGWRTSSIRREDELPKPPQRSLDG-----YKHV-VDVEYCPPVSSEGAHFAPEVAKAKEAAQTEPSTQNTVEYHELAEEEMMQGLQRLGWKKVDVSFHSAVWPFFAHNNIHVKNEWFHNAGAGVVKHVADS 435          
BLAST of jgi.p|Trimin1|350000 vs. uniprot
Match: UPI000CD58543 (uncharacterized protein LOC17880918 n=1 Tax=Capsella rubella TaxID=81985 RepID=UPI000CD58543)

HSP 1 Score: 119 bits (299), Expect = 2.900e-27
Identity = 107/338 (31.66%), Postives = 155/338 (45.86%), Query Frame = 1
Query:   10 LGTQIDSRYGADSYV---------YLSEANAGPFKTLDGIDEGGSRFFEEVMNLVERPMLRTA-RKISFVAHGIGGLYVRFALKRLY--------------ERGVLGGR---LSPINFITFGTPHLGT--------------LTSAAGVMGALIEGRTSAQLKLKDGDERFGRPPLLVEMC----NREYVAALGRFAVRKLYANVRFDSMELY-SASIR----LDDPYMGLSDMQLAARITPQYTHVLVDAEDHAAANAGAGQQQRQVVAPFRPQLAGQLSDRRIWEDGAQALMDIGWLRVDI--YNPKG-LSPHKDLVVATVWLNKEGMDIVRHCVD 864
            +G+  D +Y A+ +V         + SE+N+    T DG+D+ G R   EV+ +V++   RT  +KISFVAH +GGL  R+A+ +LY              ++   GG    L P+NFITF TPHLG+              L   A     L  GRT   L L D D+  G PPLL+ M     + ++++AL  F  R  YANV FDSM  + ++SIR    L  P +  +D        P Y H++    +H     G+      VV      L          E+    L  + W RVD+  +N K     H  + V T WL+ +G D+V H +D
Sbjct:  102 VGSAADWKYAAEQFVKKFPDKVLVHRSESNSATL-TFDGVDKMGERLANEVLAVVKK---RTGLKKISFVAHSLGGLVARYAIGKLYGQPGEVDSLDSPSKDKSARGGEIAGLEPMNFITFATPHLGSRGHRQFPILCGLPFLERTASQTAHLAAGRTGKHLFLVDNDD--GNPPLLIRMATDCDDLKFISALHVFKRRVAYANVNFDSMVGWRTSSIRRPNELPKPNLLATD--------PNYPHIVY--VEHGNVENGSCGSTSTVVTEQNTDLE---------EEMIHGLSQLSWERVDVSFHNSKQRYVAHSTIQVKTYWLHSDGKDVVFHMMD 414          
BLAST of jgi.p|Trimin1|350000 vs. uniprot
Match: S8CLQ4_9LAMI (DUF676 domain-containing protein (Fragment) n=1 Tax=Genlisea aurea TaxID=192259 RepID=S8CLQ4_9LAMI)

HSP 1 Score: 119 bits (297), Expect = 3.500e-27
Identity = 94/329 (28.57%), Postives = 145/329 (44.07%), Query Frame = 1
Query:    7 YLGTQIDSRYGADSYVYLSEANAGPFKTLDGIDEGGSRFFEEVMNLVERPMLRTARKISFVAHGIGGLYVRFALKRLYE--------RGVLGGRLSPINFITFGTPHLGT--------------LTSAAGVMGALIEGRTSAQLKLKDGDERFGRPPLLVEMCNR----EYVAALGRFAVRKLYANVRFDSM------------ELYSASIRLDDPYMGLSDMQLAARITPQYTHVLVDAEDHAAANAGAGQQQRQVVAPFRPQLAGQLSDRRIWEDGA-QALMDIGWLRVDIYNPKGLSP---HKDLVVATVWLNKEGMDIVRHCVDT 867
            Y  +++  + G    +Y S +N    KT  G+D  G R   EVM +V++    + +KISF+AH +GGL+ R+A+  LY+        RG + G L  +NFIT  TPHLG               L   A  +  +  GRT  QL L DG+     PPLL++M +     +++++L  F  R LYANV +D M            EL+    R  D Y  + D++  A +  +      +A             + +  A   P +   +    I E+     L  +GW +VD+     L P   H ++ V   W +  G  +V H VDT
Sbjct:   60 YFESELKRQLGKKFMIYASSSNTRT-KTFTGVDGSGKRLAAEVMQVVKKT--ESLKKISFLAHSLGGLFARYAVAVLYDPNVSSSLSRGSIAG-LEAVNFITLATPHLGVRGNKQLPFLLGLSFLERLAAPLAPIFTGRTGKQLFLTDGEP--SNPPLLLKMASDCDDGKFISSLAAFKCRVLYANVSYDHMVGWRTSSIRRENELFKPPTRSLDGYKHVVDVEYCAPLLSERPRFPPEAA------------KAKEAAQNDPNILSTIGYHEIMEEEMIHGLQSLGWKKVDVSFHSALWPFSAHNNIHVKNEWFHNAGAGVVAHVVDT 370          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|350000 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YY83_9STRA1.160e-210100.00Putative serine esterase-domain-containing protein... [more]
D7G8V8_ECTSI5.930e-6537.29Fibronectin type-III domain-containing protein n=1... [more]
A0A6H5KZX8_9PHAE4.070e-3143.29Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6D2L6X3_9BRAS2.500e-3032.71DUF676 domain-containing protein n=5 Tax=Coluteoca... [more]
A0A068UWL3_COFCA8.350e-2930.40DUF676 domain-containing protein n=5 Tax=Coffea Ta... [more]
A0A087GGT4_ARAAL1.020e-2831.93DUF676 domain-containing protein n=2 Tax=Arabis Ta... [more]
V4P5F5_EUTSA1.490e-2831.75DUF676 domain-containing protein n=2 Tax=Eutrema s... [more]
UPI00053F3B506.060e-2830.63uncharacterized protein LOC104900483 isoform X1 n=... [more]
UPI000CD585432.900e-2731.66uncharacterized protein LOC17880918 n=1 Tax=Capsel... [more]
S8CLQ4_9LAMI3.500e-2728.57DUF676 domain-containing protein (Fragment) n=1 Ta... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_53contigContig_53:664741..668233 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|350000|estExt_Genemark1.C_Ctg_530081
BRITEko00000,ko00001,ko00002,ko01000,ko01002,ko03051
KEGG ModuleM00340
KEGG Pathwayko03050,map03050
KEGG koko:K02737
EC3.4.25.1
Descriptionacylglycerol lipase activity
COG categoryJ
Max annot lvl2759|Eukaryota
EggNOG OGsKOG4372@1|root,KOG4372@2759|Eukaryota
Evalue3.3e-66
Seed ortholog2880.D7G8V8
Hectar predicted targeting categoryother localisation
TranscriptId350322
TrackFilteredModels1
ProteinId350000
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|350000gene_8209Tribonema minus UTEX_B_3156 geneContig_53 664741..668233 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|350000Trimin1|350000|estExt_Genemark1.C_Ctg_530081Tribonema minus UTEX_B_3156 polypeptideContig_53 664741..668196 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_8209_1exon_8209_1Tribonema minus UTEX_B_3156 exonContig_53 664741..664787 +
exon_8209_2exon_8209_2Tribonema minus UTEX_B_3156 exonContig_53 665025..665154 +
exon_8209_3exon_8209_3Tribonema minus UTEX_B_3156 exonContig_53 665559..665714 +
exon_8209_4exon_8209_4Tribonema minus UTEX_B_3156 exonContig_53 666132..666365 +
exon_8209_5exon_8209_5Tribonema minus UTEX_B_3156 exonContig_53 666691..666830 +
exon_8209_6exon_8209_6Tribonema minus UTEX_B_3156 exonContig_53 668025..668233 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_8209CDS_8209Tribonema minus UTEX_B_3156 CDSContig_53 664741..664787 +


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR3_8209UTR3_8209Tribonema minus UTEX_B_3156 three_prime_UTRContig_53 668197..668233 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_8209 ID=mRNA_8209|Name=jgi.p|Trimin1|350000|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=916bp|location=Sequence derived from alignment at Contig_53:664741..668233+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGCCTACCTGGGCACGCAGATTGACTCACGATACGGCGCTGACTCATA
TGTATACCTCTCAGAGGCAAATGCAGGCCCCTTCAAGACGCTGGACGGCA
TAGATGAAGGTGGCAGCCGCTTCTTTGAGGAGGTGATGAACCTGGTGGAG
CGCCCTATGCTGCGCACAGCCCGCAAGATCAGCTTTGTGGCACACGGCAT
CGGGGGCTTGTATGTGCGCTTTGCTCTGAAACGTCTGTACGAGAGAGGTG
TGCTGGGCGGCCGCCTATCCCCAATCAACTTCATCACATTCGGGACTCCA
CACCTTGGGACGCTTACCTCAGCAGCTGGCGTGATGGGCGCTCTGATTGA
GGGGCGCACATCAGCGCAGTTGAAGCTCAAGGACGGAGATGAGCGCTTTG
GGAGGCCGCCCCTGCTCGTTGAGATGTGCAACAGGGAGTACGTGGCGGCG
CTGGGTCGCTTTGCTGTGCGCAAGCTGTACGCAAACGTGCGGTTTGACAG
CATGGAGCTCTACAGCGCGTCCATCAGACTTGATGACCCCTACATGGGGT
TGTCTGACATGCAGCTGGCAGCACGCATTACTCCCCAGTATACGCATGTG
CTGGTCGACGCAGAAGACCATGCGGCAGCCAATGCAGGGGCAGGACAACA
GCAGAGGCAGGTTGTAGCGCCATTCAGGCCACAGCTGGCCGGCCAACTGT
CGGACAGGCGCATTTGGGAAGATGGTGCACAGGCTCTGATGGACATCGGT
TGGCTGCGAGTGGACATATACAACCCCAAAGGCCTCAGCCCACACAAAGA
CCTTGTGGTGGCCACAGTGTGGCTCAACAAAGAGGGCATGGACATAGTTC
GGCACTGCGTGGACACTGCGCTCACATAGCATGGCTTTGTTGCAAATAAA
TCACACACATGCCAGA
back to top

protein sequence of jgi.p|Trimin1|350000

>Trimin1|350000|estExt_Genemark1.C_Ctg_530081 ID=Trimin1|350000|estExt_Genemark1.C_Ctg_530081|Name=jgi.p|Trimin1|350000|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=293bp
MAYLGTQIDSRYGADSYVYLSEANAGPFKTLDGIDEGGSRFFEEVMNLVE
RPMLRTARKISFVAHGIGGLYVRFALKRLYERGVLGGRLSPINFITFGTP
HLGTLTSAAGVMGALIEGRTSAQLKLKDGDERFGRPPLLVEMCNREYVAA
LGRFAVRKLYANVRFDSMELYSASIRLDDPYMGLSDMQLAARITPQYTHV
LVDAEDHAAANAGAGQQQRQVVAPFRPQLAGQLSDRRIWEDGAQALMDIG
WLRVDIYNPKGLSPHKDLVVATVWLNKEGMDIVRHCVDTALT*
back to top

mRNA from alignment at Contig_53:664741..668233+

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_8209 ID=mRNA_8209|Name=jgi.p|Trimin1|350000|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=3493bp|location=Sequence derived from alignment at Contig_53:664741..668233+ (Tribonema minus UTEX_B_3156 )
ATGGCCTACCTGGGCACGCAGATTGACTCACGATACGGCGCTGACTCGTA AGTTGCCAAGGCAAAGATGCATACATTAAGTGCAGTTGTGCTGATGCAGT GCTGTTGATTTGTGCTACGCAGTGCACTATCCCAAATGCTGTAGTGGCTG CGTAAGAGGCTGCTGGTGATATGTTCTGCCGACACATCTCTGCTCCGGTT TGTCATCAGCTTTTCTGATGAATGCACACGGAAGTGCTTGCCCGGATGAA CAGCCTGCTTCGTTTTTTGACACTTGCCCCACAGATATGTATACCTCTCA GAGGCAAATGCAGGCCCCTTCAAGACGCTGGACGGCATAGATGAAGGTGG CAGCCGCTTCTTTGAGGAGGTGATGAACCTGGTGGAGCGCCCTATGCTGC GCACAGCCCGCAAGGTACATGTCCAAGTTCAGGATCACATGTTTCAGTGT GCTTGAGTTACATGGTAGGTGCACAGAGAGCACCTGATTTGATTAGCAAC AGCAAGATTGCGCTGGGGCAGACGGTTTGATCCCATACTACCTCACTGGG GCCGGCTGTTTGTACCAGATCACAACGATCACAAATGTTGTTAGCAGTGC ATTTTGATTATCTGGTAGTGCAAGCGCCTGTCTGCTGGATGCGCAAGCAC CCTTGGCTTGAATGTTCAGTTTACAAACTACTGTATTGCTTGTGACCTTA TTCATTGGAGTGACTTATCCTACAGCTCACAATGCAACTGACGTCGGTAC ATTGTTACTCATGTTCGTTCCACATGTGCTGACAATGCTGCTCACAACAT AATCTTGCGCATTTGCAGATCAGCTTTGTGGCACACGGCATCGGGGGCTT GTATGTGCGCTTTGCTCTGAAACGTCTGTACGAGAGAGGTGTGCTGGGCG GCCGCCTATCCCCAATCAACTTCATCACATTCGGGACTCCACACCTTGGG ACGCTTACCTCAGCAGCTGGCGTGGTGAGTGCTTGCAAGACACCATGAGC ATCCATGCAAACACATACTGCATGAATGAAGTTTGCTGCGCACCAGTACC CCTCTGTGAAGCATGTTGTTTTCCTTGTGGGATGCCTGGCTCCTACTGGT CATACGGACGCAGGCGCAGCCCCCGCTGGCAAGCCAGCGTGGATGCTGAG ATGATATAGTGACAAACTGCATGGCTTGACGCCATTGAGAGCACTGATCA CAAGTGGTGAGAAGTGGAATGGTTGCTTTGGTCCGCCCACTGTCATTGCT ATTCTAATCGGAAGTCTATATCATCACAACTAGCAAGGCTCACTGTCTAA AAGCGCTCTTGTGCACGGCCGCAGTACCAATGGTCCTGTGCGCAGCGTGT ATTGCATACGCTGACCCATAAAGTGTTGTGCTTGTTGACAGATGGGCGCT CTGATTGAGGGGCGCACATCAGCGCAGTTGAAGCTCAAGGACGGAGATGA GCGCTTTGGGAGGCCGCCCCTGCTCGTTGAGATGTGCAACAGGGAGTACG TGGCGGCGCTGGGTCGCTTTGCTGTGCGCAAGCTGTACGCAAACGTGCGG TTTGACAGCATGGAGCTCTACAGCGCGTCCATCAGACTTGATGACCCCTA CATGGGGTTGTCTGACATGCAGCTGGTGAGCAAACAATATGGTGCTGGAT GCAAGATATGCTCACTCTTTAGTTCTTCGTGCATGCTTGTTGGCCGGAGC TTTTGTTTATGATGCACACGTATGGGCAGCATGGCTGTGACCTTCGAATG CGGAAGCATGCTTGCAATAGATTTCAGCCCCAAAACACTGCGCAAGGTTA CTGGTATGACACTCATTTCCAGCACATAATCATCACTGTCAGGTGCTGAA GCCCGGGGCGCACTTGTAGCGGCACACCAGCACTGCCTTGAACGTAGTAC TCCGCACCTCATGCCAAGCCTGTTTGCGCTGCGTTGTTGGTGCTTTGCAG GCAGCACGCATTACTCCCCAGTATACGCATGTGCTGGTCGACGCAGAAGA CCATGCGGCAGCCAATGCAGGGGCAGGACAACAGCAGAGGCAGGTTGTAG CGCCATTCAGGCCACAGCTGGCCGGCCAACTGTCGGACAGGTGAGGAGAA TTCCCATTTGTTTGTGTTTCCTGCAATTGTTGTTGTCGATGGCAATTTTC TGCTACGGTGCTGCTCACAAGTCATGTTGGAAGCGTGAGCGCATCATTAA GCTGACCTGCTGCATTGCCGCACTTCAGCAGCACAGCCATCACACAAGTA CTTGAAGGTGTCATAGAATCGTGCTGCGCTGCAGATGCCTGCATGGCAGC CCCCAGCACGCATGTTGTATTGCGCTCTGCGATTTGCAGTTGCCAGACTT CGGCATCCTTCACAATAATCAGTAATCGTTCTGATTCAACGCCGCAAAGC ACGTGAAGCGGCAAATAGTCTGCGGGCACTCGCAATTCTTGTGCACGGGA GTGTGCGTCACGAGCCACAGTGCTTGCACGACGCAACAGAGACTACAGCC AGGGGTGTGCGACAAAACCTCTTTAGCTTTTTGTGCAACTGGTTTTGGCA TTGGGTTCGGACCGGAACTGTTGAACCCGCCGGAAGCACGGACCTCATTT GAGGCAGGGTGACAACCCAGACAGGTTGTGACGCCATTCTGTGCATGATA CTTGCATACATCGTGCTTCAAACTGATGGTTGCAGCTTGTTCATTGCTGT CACAGTAGTTGTCACACACCCCCACCTCACCGCCCCCTGGCCCTGACCCT AACCCTAGCCCTGACCCAACCCTAACCCTAAGCGCAGCAGCTGGTGAGGT CACCAGTAAGTGATACCAAAGCCTCCAGAAGCAGCAATTCTTTCGCCAAC TTGCTCAGACATCATATCTGACGTGCTACAGGGCAGCAAGTGGTGCTCAA CAGCCAAAAACCGTGAGTTATACGTGTTCAATAGAGTTCAGACAGTCCGG GCGCCCCCCTATCGACATCGGAACCCGTCGGAACTCAAGGTTGGAACCTG AGGCTTTGAAACCCTAAGGTTCTGGCGCCCACCCTGACTACAGCAGACAT TGTGTGTAGATAGGCTGCAGTAAGACTCTACTCTCTCCAGTCCTAGTGGG CATCAGCACAGCATCACGCGTAATCTGCTGCAGGATGCAGCAAAATACAA CTGTGCCGACTCACAACCAGTAGATGCGGCACAGAACAAAAAAATGCCTC CCTACGTTGCGGCTCTTTGTCCATTCCATGACGAGACAACAGGCACACTG ACGCTGCATTCGCCCGTGCTCGCCGTCGCACCAGGCGCATTTGGGAAGAT GGTGCACAGGCTCTGATGGACATCGGTTGGCTGCGAGTGGACATATACAA CCCCAAAGGCCTCAGCCCACACAAAGACCTTGTGGTGGCCACAGTGTGGC TCAACAAAGAGGGCATGGACATAGTTCGGCACTGCGTGGACACTGCGCTC ACATAGCATGGCTTTGTTGCAAATAAATCACACACATGCCAGA
back to top

Coding sequence (CDS) from alignment at Contig_53:664741..668233+

>mRNA_8209 ID=mRNA_8209|Name=jgi.p|Trimin1|350000|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=879bp|location=Sequence derived from alignment at Contig_53:664741..668233+ (Tribonema minus UTEX_B_3156 )
ATGGCCTACCTGGGCACGCAGATTGACTCACGATACGGCGCTGACTCATA
TGTATACCTCTCAGAGGCAAATGCAGGCCCCTTCAAGACGCTGGACGGCA
TAGATGAAGGTGGCAGCCGCTTCTTTGAGGAGGTGATGAACCTGGTGGAG
CGCCCTATGCTGCGCACAGCCCGCAAGATCAGCTTTGTGGCACACGGCAT
CGGGGGCTTGTATGTGCGCTTTGCTCTGAAACGTCTGTACGAGAGAGGTG
TGCTGGGCGGCCGCCTATCCCCAATCAACTTCATCACATTCGGGACTCCA
CACCTTGGGACGCTTACCTCAGCAGCTGGCGTGATGGGCGCTCTGATTGA
GGGGCGCACATCAGCGCAGTTGAAGCTCAAGGACGGAGATGAGCGCTTTG
GGAGGCCGCCCCTGCTCGTTGAGATGTGCAACAGGGAGTACGTGGCGGCG
CTGGGTCGCTTTGCTGTGCGCAAGCTGTACGCAAACGTGCGGTTTGACAG
CATGGAGCTCTACAGCGCGTCCATCAGACTTGATGACCCCTACATGGGGT
TGTCTGACATGCAGCTGGCAGCACGCATTACTCCCCAGTATACGCATGTG
CTGGTCGACGCAGAAGACCATGCGGCAGCCAATGCAGGGGCAGGACAACA
GCAGAGGCAGGTTGTAGCGCCATTCAGGCCACAGCTGGCCGGCCAACTGT
CGGACAGGCGCATTTGGGAAGATGGTGCACAGGCTCTGATGGACATCGGT
TGGCTGCGAGTGGACATATACAACCCCAAAGGCCTCAGCCCACACAAAGA
CCTTGTGGTGGCCACAGTGTGGCTCAACAAAGAGGGCATGGACATAGTTC
GGCACTGCGTGGACACTGCGCTCACATAG
back to top