mRNA_8206 (mRNA) Tribonema minus UTEX_B_3156
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Overview
Homology
BLAST of jgi.p|Trimin1|167754 vs. uniprot
Match: A0A835YPR9_9STRA (Protein-tyrosine-phosphatase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPR9_9STRA) HSP 1 Score: 786 bits (2031), Expect = 4.970e-288 Identity = 377/377 (100.00%), Postives = 377/377 (100.00%), Query Frame = 1
Query: 1 MHHFFCIDNELVYWNFFLDFGPLSLGQLYRFCQGLNTKLRDASLRDKVIYFYSGVHPHRRANASLLITAWTVLYLHRTPEEALLPFRYIIQSLPAFHDASPCVCTYQLRVIDCLRGLEKARRHRFFDFENFNLLSYEHYEQVEHGDLNWIVEGKFLAFAGPCERSSITPEGYRTLTPDDFIPYFKKHNVTLVIRLNKKYYDETKFTRAGIAHAELYYLDGSVPSHSILSRFLELCERTPGAVAVHCKAGLGRTGTCIGCYLMKHYHMTAAEAIGWMRVCRPGSVIGPQQHFMQVYTASSTARQCACAQYHVSAADNFQFSGHAVKPPLLRKAASAPAMANLAAAVIHPPSHPPQVMVGKYVLGCRPIMAHTTAADLT 1131
MHHFFCIDNELVYWNFFLDFGPLSLGQLYRFCQGLNTKLRDASLRDKVIYFYSGVHPHRRANASLLITAWTVLYLHRTPEEALLPFRYIIQSLPAFHDASPCVCTYQLRVIDCLRGLEKARRHRFFDFENFNLLSYEHYEQVEHGDLNWIVEGKFLAFAGPCERSSITPEGYRTLTPDDFIPYFKKHNVTLVIRLNKKYYDETKFTRAGIAHAELYYLDGSVPSHSILSRFLELCERTPGAVAVHCKAGLGRTGTCIGCYLMKHYHMTAAEAIGWMRVCRPGSVIGPQQHFMQVYTASSTARQCACAQYHVSAADNFQFSGHAVKPPLLRKAASAPAMANLAAAVIHPPSHPPQVMVGKYVLGCRPIMAHTTAADLT
Sbjct: 1 MHHFFCIDNELVYWNFFLDFGPLSLGQLYRFCQGLNTKLRDASLRDKVIYFYSGVHPHRRANASLLITAWTVLYLHRTPEEALLPFRYIIQSLPAFHDASPCVCTYQLRVIDCLRGLEKARRHRFFDFENFNLLSYEHYEQVEHGDLNWIVEGKFLAFAGPCERSSITPEGYRTLTPDDFIPYFKKHNVTLVIRLNKKYYDETKFTRAGIAHAELYYLDGSVPSHSILSRFLELCERTPGAVAVHCKAGLGRTGTCIGCYLMKHYHMTAAEAIGWMRVCRPGSVIGPQQHFMQVYTASSTARQCACAQYHVSAADNFQFSGHAVKPPLLRKAASAPAMANLAAAVIHPPSHPPQVMVGKYVLGCRPIMAHTTAADLT 377
BLAST of jgi.p|Trimin1|167754 vs. uniprot
Match: W7T2L2_9STRA (Protein-tyrosine-phosphatase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T2L2_9STRA) HSP 1 Score: 449 bits (1156), Expect = 2.870e-153 Identity = 199/291 (68.38%), Postives = 242/291 (83.16%), Query Frame = 1
Query: 7 HFFCIDNELVYWNFFLDFGPLSLGQLYRFCQGLNTKLRDASLRDKVIYFYSGVHPHRRANASLLITAWTVLYLHRTPEEALLPFRYIIQSLPAFHDASPCVCTYQLRVIDCLRGLEKARRHRFFDFENFNLLSYEHYEQVEHGDLNWIVEGKFLAFAGPCERSSITPEGYRTLTPDDFIPYFKKHNVTLVIRLNKKYYDETKFTRAGIAHAELYYLDGSVPSHSILSRFLELCERTPGAVAVHCKAGLGRTGTCIGCYLMKHYHMTAAEAIGWMRVCRPGSVIGPQQHFMQ 879
HFF +DNEL+YWNFFLDFGPL+L QLYRFCQ LN+KL+ SLRDK+IY+Y G+H H+R NA+LL+ AW+++YL R+P+EA PF + S P FHDASPC+CTY L ++DCL+G+ KAR + FFDF FN+ YEH+EQVE+GDLNWIV+GKFLAFAGP ++PEGY TLTP+++ YF K NV LVIRLNKKYYDETKFT GI H ELYYLDGS+P+++IL FL+ CE TPGA+AVHCKAGLGRTGTCI CYLMKHY TAAEAIGW+RVCRPGS+IGPQQH+++
Sbjct: 35 HFFSMDNELIYWNFFLDFGPLNLAQLYRFCQRLNSKLKSESLRDKIIYYYCGLHAHKRTNAALLMAAWSMIYLDRSPKEAFEPFCKVSSSFPPFHDASPCLCTYPLSILDCLKGIAKARFYNFFDFCRFNVEEYEHFEQVENGDLNWIVQGKFLAFAGPQNNRELSPEGYYTLTPENYAGYFLKRNVQLVIRLNKKYYDETKFTSLGIKHLELYYLDGSIPTNAILQTFLKACEETPGAIAVHCKAGLGRTGTCIACYLMKHYRFTAAEAIGWLRVCRPGSIIGPQQHYLE 325
BLAST of jgi.p|Trimin1|167754 vs. uniprot
Match: A0A7S1B7L7_9STRA (Protein-tyrosine-phosphatase n=3 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1B7L7_9STRA) HSP 1 Score: 409 bits (1050), Expect = 1.660e-138 Identity = 192/291 (65.98%), Postives = 228/291 (78.35%), Query Frame = 1
Query: 7 HFFCIDNELVYWNFFLDFGPLSLGQLYRFCQGLNTKLRDASLRDKVIYFYSGVHPHRRANASLLITAWTVLYLHRTPEEALLPFRYIIQSLPAFHDASPCVCTYQLRVIDCLRGLEKARRHRFFDFENFNLLSYEHYEQVEHGDLNWIVEGKFLAFAGPCERSSITPEGYRTLTPDDFIPYFKKHNVTLVIRLNKKYYDETKFTRAGIAHAELYYLDGSVPSHSILSRFLELCERTPGAVAVHCKAGLGRTGTCIGCYLMKHYHMTAAEAIGWMRVCRPGSVIGPQQHFMQ 879
H+F IDNELVYWNFFLDFGPL+LGQLYRFC LN+K+ D L K+IYF+ G +RANA++LI +W +LY+ RTP+EA FR I P FHDASPCVCTY+L V+DCLRGL KA+ + FF+FE F++ YE++EQVE+GDLNWI+E K LAFAGP +S++ EGYRTL P D+IPYFK NV LVIRLNKKYYDE KF AGI H E YYLDGSVP IL R L ++ GA+A+HCKAGLGRTGTCIG ++MKHY TAAEAIGWMR+CRPGSVIGPQQ FM+
Sbjct: 39 HYFNIDNELVYWNFFLDFGPLNLGQLYRFCTLLNSKMTDPKLSKKIIYFFCGAEGTKRANAAMLICSWQILYMGRTPDEAYEEFRGAI--FPPFHDASPCVCTYKLSVLDCLRGLAKAKMYNFFNFEKFDVQEYEYFEQVENGDLNWIIENKILAFAGPHYTNSLSKEGYRTLIPGDYIPYFKSKNVKLVIRLNKKYYDEVKFIDAGINHFEQYYLDGSVPPKKILKRILREMDKCDGAMAIHCKAGLGRTGTCIGAWMMKHYKFTAAEAIGWMRICRPGSVIGPQQQFMK 327
BLAST of jgi.p|Trimin1|167754 vs. uniprot
Match: F0XVY6_AURAN (Protein-tyrosine-phosphatase (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XVY6_AURAN) HSP 1 Score: 399 bits (1025), Expect = 4.920e-136 Identity = 187/290 (64.48%), Postives = 222/290 (76.55%), Query Frame = 1
Query: 13 FCIDNELVYWNFFLDFGPLSLGQLYRFCQGLNTKLRDASLRDKVIYFYSGVHPHRRANASLLITAWTVLYLHRTPEEALLPFRYIIQSLPAFHDASPCVCTYQLRVIDCLRGLEKARRHRFFDFENFNLLSYEHYEQVEHGDLNWIVEGKFLAFAGPCERS-SITPEGYRTLTPDDFIPYFKKHNVTLVIRLNKKYYDETKFTRAGIAHAELYYLDGSVPSHSILSRFLELCERTPGAVAVHCKAGLGRTGTCIGCYLMKHYHMTAAEAIGWMRVCRPGSVIGPQQHFMQ 879
F ID+ LVYWNFFLDFGPL+LGQLYRFC LN KL+ LRDKVIY+YS HPH RANA+ L+ AW VLYL R+PE+A P P FHDASPC CTY + V+ CL+GL KARR FF+F+ F+L YEH+E VE+GDLNWIVEGKF AFAGP +R+ S +GY+TL P+D+ YF++ NV L++RLNK YY+++KF + G H +LYYLDGS P IL +FL + E+ GA+ VHCKAGLGRTGTCIGCY MKHY TAAE IGWMRVCRPGSVIGPQQHFMQ
Sbjct: 1 FSIDDTLVYWNFFLDFGPLNLGQLYRFCTMLNAKLQSPELRDKVIYYYSSSHPHARANAAFLMGAWQVLYLGRSPEDAWKPLGDYGPDYPPFHDASPCACTYDVTVLHCLKGLHKARRFNFFNFDAFDLAEYEHFEAVENGDLNWIVEGKFFAFAGPHDRNRSSNLDGYQTLAPEDYGAYFQRKNVGLIVRLNKPYYNKSKFIQMGADHIDLYYLDGSNPPMRILKKFLAVAEQATGAIGVHCKAGLGRTGTCIGCYCMKHYKFTAAEIIGWMRVCRPGSVIGPQQHFMQ 290
BLAST of jgi.p|Trimin1|167754 vs. uniprot
Match: A0A7S4A861_9STRA (Protein-tyrosine-phosphatase n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A861_9STRA) HSP 1 Score: 395 bits (1014), Expect = 4.600e-133 Identity = 182/291 (62.54%), Postives = 217/291 (74.57%), Query Frame = 1
Query: 7 HFFCIDNELVYWNFFLDFGPLSLGQLYRFCQGLNTKLRDASLRDKVIYFYSGVHPHRRANASLLITAWTVLYLHRTPEEALLPFRYIIQSLPAFHDASPCVCTYQLRVIDCLRGLEKARRHRFFDFENFNLLSYEHYEQVEHGDLNWIVEGKFLAFAGPCERSSITPEGYRTLTPDDFIPYFKKHNVTLVIRLNKKYYDETKFTRAGIAHAELYYLDGSVPSHSILSRFLELCERTPGAVAVHCKAGLGRTGTCIGCYLMKHYHMTAAEAIGWMRVCRPGSVIGPQQHFMQ 879
H+F ID+ LVYWNFFLDFGPL+LGQLYRFC LN KLR L ++ IY+YS P R+NA++LI W +LYL RTPEEA P + P FHDASPC CTY + V+DCL+GL KAR FFDF+ F+L YEH+E VEHGDLNW+V G+F AFAGP + GY TL P+D++PYFK NV+L++RLNK YYD KF + GI H ++YYLDGS P IL +FLE+CE+T GA+ VHCKAGLGRTGTCIGCY MKH+ TAAE I W R+CRPGSVIGPQQHFMQ
Sbjct: 30 HWFSIDDALVYWNFFLDFGPLNLGQLYRFCALLNQKLRAPELSERPIYYYSSSDPRARSNAAVLIGCWQILYLQRTPEEAWAPLSTYGRYAP-FHDASPCACTYDVTVLDCLKGLHKARACNFFDFDAFDLNEYEHFEAVEHGDLNWLVYGRFFAFAGPHDAHRNPHTGYETLAPEDYVPYFKSRNVSLIVRLNKPYYDRQKFLKNGIDHVDMYYLDGSNPPIKILRKFLEVCEQTTGAIGVHCKAGLGRTGTCIGCYCMKHHKFTAAEIIAWFRICRPGSVIGPQQHFMQ 319
BLAST of jgi.p|Trimin1|167754 vs. uniprot
Match: D7G457_ECTSI (Protein-tyrosine-phosphatase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G457_ECTSI) HSP 1 Score: 391 bits (1005), Expect = 9.020e-133 Identity = 180/285 (63.16%), Postives = 214/285 (75.09%), Query Frame = 1
Query: 25 NELVYWNFFLDFGPLSLGQLYRFCQGLNTKLRDASLRDKVIYFYSGVHPHRRANASLLITAWTVLYLHRTPEEALLPFRYIIQSLPAFHDASPCVCTYQLRVIDCLRGLEKARRHRFFDFENFNLLSYEHYEQVEHGDLNWIVEGKFLAFAGPCERSSITPEGYRTLTPDDFIPYFKKHNVTLVIRLNKKYYDETKFTRAGIAHAELYYLDGSVPSHSILSRFLELCERTPGAVAVHCKAGLGRTGTCIGCYLMKHYHMTAAEAIGWMRVCRPGSVIGPQQHFMQ 879
+E YWNFFLD+GPLSLG L+RFC+ LN KL + K +Y YSG H H+R NA+ L+TAW +LY RTPE+A PF+ + P FHDASPCVCT+ L + CL+GL+KAR FF VE+GDLNW+V+GKFLAFAGP RS +T EGYRTLTP ++IPYFKKHNVTLV+RLNKKYYDE F AGI H E Y+LDGSVP S++ +F+ CE TPGAVAVHCKAGLGRTGTCIGCY+MKHY TAAE IGWMR+CRPGSVIGPQQH+++
Sbjct: 14 DEFSYWNFFLDWGPLSLGNLFRFCRTLNFKLANERRLGKAVYVYSGTHAHKRTNAAFLLTAWLLLYGGRTPEQAFAPFQDVFPPFPPFHDASPCVCTFDLFIPHCLKGLQKARHFSFFXXXXXXXXXXXXXXXVENGDLNWLVDGKFLAFAGPHSRSEMTREGYRTLTPRNYIPYFKKHNVTLVVRLNKKYYDEGLFLDAGIDHLEAYFLDGSVPPPSVIRQFIAACEATPGAVAVHCKAGLGRTGTCIGCYIMKHYSFTAAEVIGWMRICRPGSVIGPQQHYLE 298
BLAST of jgi.p|Trimin1|167754 vs. uniprot
Match: A0A2R5GCL2_9STRA (Protein-tyrosine-phosphatase n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GCL2_9STRA) HSP 1 Score: 394 bits (1011), Expect = 3.030e-132 Identity = 184/290 (63.45%), Postives = 222/290 (76.55%), Query Frame = 1
Query: 10 FFCIDNELVYWNFFLDFGPLSLGQLYRFCQGLNTKLRDASLRDKVIYFYSGVHPHRRANASLLITAWTVLYLHRTPEEALLPFRYIIQSLPAFHDASPCVCTYQLRVIDCLRGLEKARRHRFFDFENFNLLSYEHYEQVEHGDLNWIVEGKFLAFAGPCERSSITPEGYRTLTPDDFIPYFKKHNVTLVIRLNKKYYDETKFTRAGIAHAELYYLDGSVPSHSILSRFLELCERTPGAVAVHCKAGLGRTGTCIGCYLMKHYHMTAAEAIGWMRVCRPGSVIGPQQHFMQ 879
FF ID+ELVYWNFF DFGPL+LGQL+RFCQ LN L D LR K IY+YS + +RANA+ LI+ + ++YL RTPEEA PF + P FHDA+P CTY+L V+DCL+G+ KA +H FF+F F++ YEH+EQVE GDLNWI+ KFLAFAGP +R T EGY TLTP+ +IPYFK+ NVTLVIRLN+K YDE +F RAGI H +L Y DG+ P IL RF+E CE GA+AVHCKAGLGRTGTCIG Y+MKH+ MTAAE IGW+RVCRPGS+IGPQQ FM+
Sbjct: 36 FFSIDDELVYWNFFKDFGPLNLGQLFRFCQILNELLADPKLRGKCIYYYSSSNSQKRANAAFLISCYAMIYLGRTPEEAYAPFINVHPPFPPFHDATPFECTYKLSVLDCLQGVYKAMQHNFFNFSTFDVEEYEHFEQVEAGDLNWIMPNKFLAFAGPHDRRMRTREGYDTLTPEHYIPYFKRRNVTLVIRLNRKCYDEKRFERAGIRHLDLVYPDGTCPPDHILKRFIEACENNDGAIAVHCKAGLGRTGTCIGAYIMKHFGMTAAETIGWIRVCRPGSIIGPQQQFME 325
BLAST of jgi.p|Trimin1|167754 vs. uniprot
Match: A0A7S3PJW5_9STRA (Protein-tyrosine-phosphatase n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PJW5_9STRA) HSP 1 Score: 387 bits (995), Expect = 7.760e-130 Identity = 181/292 (61.99%), Postives = 226/292 (77.40%), Query Frame = 1
Query: 4 HHFFCIDNELVYWNFFLDFGPLSLGQLYRFCQGLNTKLRDASLRDKVIYFYSGVHPHRRANASLLITAWTVLYLHRTPEEALLPFRYIIQSLPAFHDASPCVCTYQLRVIDCLRGLEKARRHRFFDFENFNLLSYEHYEQVEHGDLNWIVEGKFLAFAGPCERSSITPEGYRTLTPDDFIPYFKKHNVTLVIRLNKKYYDETKFTRAGIAHAELYYLDGSVPSHSILSRFLELCERTPGAVAVHCKAGLGRTGTCIGCYLMKHYHMTAAEAIGWMRVCRPGSVIGPQQHFMQ 879
H FF ID+EL YWNF+LDFGPL+LGQLYRFC L L+D +L +K I++YS +RANA+ LI+A+ ++YL+RTPEEA +PFR P FHDA+P CTY L + DCL GL +A + ++FDF FN+ YEHYE+VE+GD NW+V+ KFLAFAGP E +GY TLTP+D+IPYFKK+ VTLVIRLN+K YDE +F R GI H +L+Y DGS P SIL +FL++CE GA+AVHCKAGLGRTG+CIGCY+MKH+ MTAA+AIGWMR+ RPGSVIGPQQHF+Q
Sbjct: 37 HAFFSIDDELEYWNFYLDFGPLNLGQLYRFCVILLDILKDPALENKKIFYYSSTQSDKRANAAFLISAFAMIYLNRTPEEAFMPFRSS-PPFPPFHDATPIQCTYNLTIPDCLSGLCEAMKLKYFDFNQFNVEEYEHYERVENGDFNWLVQNKFLAFAGPFEMKRDIGDGYLTLTPEDYIPYFKKNGVTLVIRLNRKCYDEKRFIRHGIKHVDLFYPDGSNPPESILQKFLKVCEGEKGAIAVHCKAGLGRTGSCIGCYMMKHHGMTAAQAIGWMRIARPGSVIGPQQHFLQ 327
BLAST of jgi.p|Trimin1|167754 vs. uniprot
Match: A0A812YFB7_9DINO (Protein-tyrosine-phosphatase n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812YFB7_9DINO) HSP 1 Score: 377 bits (969), Expect = 3.740e-125 Identity = 178/291 (61.17%), Postives = 220/291 (75.60%), Query Frame = 1
Query: 7 HFFCIDNELVYWNFFLDFGPLSLGQLYRFCQGLNTKLRDASLRDKVIYFYSGVHPHRRANASLLITAWTVLYLHRTPEEALLPFRYIIQSLPAFHDASPCVCTYQLRVIDCLRGLEKARRHRFFDFENFNLLSYEHYEQVEHGDLNWIVEGKFLAFAGPCERSSITPEGYRTLTPDDFIPYFKKHNVTLVIRLNKKYYDETKFTRAGIAHAELYYLDGSVPSHSILSRFLELCERTPGAVAVHCKAGLGRTGTCIGCYLMKHYHMTAAEAIGWMRVCRPGSVIGPQQHFMQ 879
H+FC+D++LVYW FFLDFGPL+LGQLYRFC+ LN KL D L K IY+YS V +RANA L++AW++LY +TPEEA PF I LP +HDASP VCTY L V+D L+G+ +A + FFDF+ F + YEH+EQ +GDL+WI GK LAFAGP S + +GY TLTP+D+IP FKK V LVIRLNKKYYDE +F +AG+ H +LYYLDGS P IL+ ++ ER GA+A+HCKAGLGRTGTCI C++MKHY TAAEAI W+RVCRPGSVIGPQQHF++
Sbjct: 34 HYFCVDSQLVYWAFFLDFGPLNLGQLYRFCEYLNHKLSDPKLEKKHIYYYSSVASDKRANAVFLLSAWSLLYQGKTPEEAWEPFAGIYPPLPPWHDASPTVCTYNLTVLDTLKGIARAVQAGFFDFDTFPIEEYEHWEQPSNGDLSWIQYGKILAFAGPHNHRS-SHDGYYTLTPEDYIPQFKKWGVKLVIRLNKKYYDEERFIKAGMDHLDLYYLDGSNPPEHILATVMDAMERCDGAIAIHCKAGLGRTGTCIACHMMKHYGFTAAEAIAWLRVCRPGSVIGPQQHFLE 323
BLAST of jgi.p|Trimin1|167754 vs. uniprot
Match: A0A7S2A3B9_9STRA (Protein-tyrosine-phosphatase n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2A3B9_9STRA) HSP 1 Score: 377 bits (969), Expect = 7.270e-125 Identity = 187/320 (58.44%), Postives = 222/320 (69.38%), Query Frame = 1
Query: 7 HFFCIDNELVYWNFFLDFGPLSLGQLYRFCQGLNTKLRDASLR--DKVIYFYSGVHPHRRANASLLITAWTVLYLHRTPEEALLPFR-------------------------YIIQSLPAFHDASPCVCTYQLRVIDCLRGLEKARRHRFFDFENFNLLSYEHYEQVEHGDLNWIVEGKFLAFAGPCERSSITPEGYRTLTPDDFIPYFKKHNVTLVIRLNKKYYDETKFTRAGIAHAELYYLDGSVPSHSILSRFLELCERTPG--AVAVHCKAGLGRTGTCIGCYLMKHYHMTAAEAIGWMRVCRPGSVIGPQQHFMQ 879
H+F IDNELVYWNFFLDFGPL+LGQLYRFC LN KL + + +K++ FYS P +RANA L+ AW VLYL RTPEEA FR +LP FHDASPC CTY L ++DCLRG+ KAR + +FDF F++ YE++EQVE+GDLNWI++ K LAFAGP + +++PEGY TLTP D+IPYFK+ NV LV+RLNKK Y+E F +AGI H E YYLDGS P IL + L E P A AVHCKAGLGRTGTCIG Y+MKHY TAAEAIGWMR+CRPG VIGPQQHF+Q
Sbjct: 51 HYFNIDNELVYWNFFLDFGPLNLGQLYRFCAKLNQKLSRGNTKYTEKILCFYSSTAPSKRANAIFLVCAWQVLYLDRTPEEAYHGFRENADMMSLPSKNCSSPPAASVAGPVVSTMTLPPFHDASPCPCTYDLSILDCLRGMSKARMYGYFDFSTFDVEEYEYFEQVENGDLNWIMKDKILAFAGPHFKKTMSPEGYCTLTPRDYIPYFKQKNVGLVVRLNKKCYNEDDFRKAGIMHVEQYYLDGSCPPMKILQKVLSAFEALPPSKAFAVHCKAGLGRTGTCIGAYMMKHYKFTAAEAIGWMRICRPGCVIGPQQHFLQ 370 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|167754 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_8206 ID=mRNA_8206|Name=jgi.p|Trimin1|167754|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1134bp|location=Sequence derived from alignment at Contig_53:630065..635075- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGCATCATTTTTTCTGCATCGACAACGAGCTGGTGTACTGGAACTTTTTback to top protein sequence of jgi.p|Trimin1|167754 >Trimin1|167754|e_gw1.53.140.1 ID=Trimin1|167754|e_gw1.53.140.1|Name=jgi.p|Trimin1|167754|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=378bp MHHFFCIDNELVYWNFFLDFGPLSLGQLYRFCQGLNTKLRDASLRDKVIYback to top mRNA from alignment at Contig_53:630065..635075- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_8206 ID=mRNA_8206|Name=jgi.p|Trimin1|167754|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=5011bp|location=Sequence derived from alignment at Contig_53:630065..635075- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_53:630065..635075- >mRNA_8206 ID=mRNA_8206|Name=jgi.p|Trimin1|167754|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1134bp|location=Sequence derived from alignment at Contig_53:630065..635075- (Tribonema minus UTEX_B_3156 )back to top |