mRNA_8188 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|155387 vs. uniprot
Match: A0A835YQ17_9STRA (G-patch domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQ17_9STRA) HSP 1 Score: 244 bits (624), Expect = 6.500e-82 Identity = 126/126 (100.00%), Postives = 126/126 (100.00%), Query Frame = 1 Query: 1 FMCLVCESTITATTSREHESSTMHIFHQKLQSGTSTAPKANLHLTETNAGYRILSKLGWTQDTGLGPSHKQGRLEPIKTVFKQDRTGLGAVKQVPRAAVASASSNDTEKFLTRKQLERLKERERRK 378 FMCLVCESTITATTSREHESSTMHIFHQKLQSGTSTAPKANLHLTETNAGYRILSKLGWTQDTGLGPSHKQGRLEPIKTVFKQDRTGLGAVKQVPRAAVASASSNDTEKFLTRKQLERLKERERRK Sbjct: 1 FMCLVCESTITATTSREHESSTMHIFHQKLQSGTSTAPKANLHLTETNAGYRILSKLGWTQDTGLGPSHKQGRLEPIKTVFKQDRTGLGAVKQVPRAAVASASSNDTEKFLTRKQLERLKERERRK 126
BLAST of jgi.p|Trimin1|155387 vs. uniprot
Match: UPI0018CDD1DD (G patch domain and ankyrin repeat-containing protein 1 homolog n=1 Tax=Teleopsis dalmanni TaxID=139649 RepID=UPI0018CDD1DD) HSP 1 Score: 79.3 bits (194), Expect = 5.800e-15 Identity = 50/132 (37.88%), Postives = 74/132 (56.06%), Query Frame = 1 Query: 1 FMCLVCESTITATTSREHESSTMHIFHQKLQSGTSTAPKANLHLTETNAGYRILSKLGWTQDTGLGPSHKQGRLEPIKTVFKQDRTGLGAVKQVPRA---------AVASASSNDTEKFLTRKQLERLKERE 369 F C VC T T+ REH++ST+H F+ K + + K N+ N G +++ K GW +++GLGP+ + GRL PIKTV ++ RTGLG + VPR AV T+K T+ ++R K+RE Sbjct: 210 FFCGVCRKQFTDTSLREHQTSTVHQFNTKSELPINKLQKFNI--PPKNRGLQLMVKQGWDKESGLGPT-QSGRLYPIKTVLRKQRTGLGIKQDVPRVTHFGAFDLNAVKHKPMFSTKKSHTKNDMKREKQRE 338
BLAST of jgi.p|Trimin1|155387 vs. uniprot
Match: A0A1I8MKL9_MUSDO (G-patch domain-containing protein n=1 Tax=Musca domestica TaxID=7370 RepID=A0A1I8MKL9_MUSDO) HSP 1 Score: 75.9 bits (185), Expect = 1.030e-13 Identity = 40/95 (42.11%), Postives = 62/95 (65.26%), Query Frame = 1 Query: 1 FMCLVCESTITATTSREHESSTMHIFHQKLQSGTSTAPKANLHLTETNAGYRILSKLGWTQDTGLGPSHKQGRLEPIKTVFKQDRTGLGAVKQVP 285 F C +C+ T TT REHE+ST+H F+ K + ++ K N+ N G +++ K GW +++GLGP+ + GRL P+KTV ++ RTGLG ++Q P Sbjct: 205 FYCEICKRTFAETTKREHETSTVHQFNVKAPTTSNKLQKFNI--PPRNKGLQLMVKQGWDKESGLGPT-QTGRLYPVKTVIRKQRTGLG-IEQDP 295
BLAST of jgi.p|Trimin1|155387 vs. uniprot
Match: A0A8K1FIN8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FIN8_PYTOL) HSP 1 Score: 73.2 bits (178), Expect = 1.060e-13 Identity = 35/89 (39.33%), Postives = 53/89 (59.55%), Query Frame = 1 Query: 1 FMCLVCESTITATTSREHESSTMHIFHQKLQSGTSTAPKANLHLTETNAGYRILSKLGWTQDTGLGPSHKQGRLEPIKTVFKQDRTGLG 267 + C C+ + T+ +H+ ST H+ + T T + L E+N GY+++ +GW +DTGLGP +QGR+EPI T+ K DR GLG Sbjct: 2 YFCAACKLYVKETSVSDHDQSTAHLL-----ASTRTPSLRKVWLPESNRGYQMMMNMGWKEDTGLGP-REQGRVEPIATILKNDRAGLG 84
BLAST of jgi.p|Trimin1|155387 vs. uniprot
Match: A0A1I8Q577_STOCA (G-patch domain-containing protein n=1 Tax=Stomoxys calcitrans TaxID=35570 RepID=A0A1I8Q577_STOCA) HSP 1 Score: 71.6 bits (174), Expect = 3.520e-12 Identity = 39/95 (41.05%), Postives = 59/95 (62.11%), Query Frame = 1 Query: 1 FMCLVCESTITATTSREHESSTMHIFHQKLQSGTSTAPKANLHLTETNAGYRILSKLGWTQDTGLGPSHKQGRLEPIKTVFKQDRTGLGAVKQVP 285 F C +C+ T + TT + H SST+H F+ K + K N+ + N G ++ K GW +++GLGPS + GRL P+KTV ++ RTGLG ++Q P Sbjct: 207 FYCDICQRTFSETTRKGHMSSTVHQFNTKSSLSDNRLQKFNI--SARNKGLLLMMKQGWDRESGLGPS-QSGRLYPVKTVIRKQRTGLG-IEQEP 297
BLAST of jgi.p|Trimin1|155387 vs. uniprot
Match: A0A6M2DGB7_9NEOP (Putative major histocompatibility complex protein bat4 n=1 Tax=Xenopsylla cheopis TaxID=163159 RepID=A0A6M2DGB7_9NEOP) HSP 1 Score: 71.2 bits (173), Expect = 4.060e-12 Identity = 40/89 (44.94%), Postives = 53/89 (59.55%), Query Frame = 1 Query: 1 FMCLVCESTITATTSREHESSTMHIFHQKLQSGTSTAPKANLHLTETNAGYRILSKLGWTQDTGLGPSHKQGRLEPIKTVFKQDRTGLG 267 F C C T + HE+ST+H+FH K G + P + +N GY+IL + GW Q TGLGPS + GR PIKTV +++RTGLG Sbjct: 189 FFCEPCNEHFKNCTIKSHETSTLHLFHTK---GVISHPYFGI--PASNKGYQILLRNGWNQKTGLGPS-EDGRKFPIKTVIRENRTGLG 271
BLAST of jgi.p|Trimin1|155387 vs. uniprot
Match: A0A484BQ40_DRONA (G-patch domain-containing protein n=3 Tax=mojavensis species complex TaxID=198037 RepID=A0A484BQ40_DRONA) HSP 1 Score: 69.3 bits (168), Expect = 2.300e-11 Identity = 41/110 (37.27%), Postives = 63/110 (57.27%), Query Frame = 1 Query: 1 FMCLVCESTITATTSREHESSTMHIFHQKLQSGTSTAPKANLH---LTETNAGYRILSKLGWTQDTGLGPSHKQGRLEPIKTVFKQDRTGLGAVKQVPRAAVASASSNDT 321 F C +C+ + +T R+H++ST+H F+ K + P LH ++ N G +++ K GW ++ GLGP + GRL P+KTV ++ RTGLG Q P A V + DT Sbjct: 199 FYCELCQREYSESTWRDHQTSTVHRFNMK------SLPPHRLHKFNISARNRGLQLMVKQGWDREHGLGPQ-QNGRLYPVKTVLRKQRTGLGI--QQPPARVTHFEAFDT 299
BLAST of jgi.p|Trimin1|155387 vs. uniprot
Match: UPI0018A17C23 (G patch domain and ankyrin repeat-containing protein 1 homolog n=3 Tax=suzukii subgroup TaxID=32353 RepID=UPI0018A17C23) HSP 1 Score: 68.2 bits (165), Expect = 5.860e-11 Identity = 39/99 (39.39%), Postives = 56/99 (56.57%), Query Frame = 1 Query: 1 FMCLVCESTITATTSREHESSTMHIFHQKLQSGTSTAPKANLH---LTETNAGYRILSKLGWTQDTGLGPSHKQGRLEPIKTVFKQDRTGLGAVKQVPR 288 F C +C+ T +H++ST+H F+ K P LH ++ N G +++ K GW Q+ GLGPS K GRL P+KTV ++ RTGLG +Q R Sbjct: 198 FYCEICKRDYKETPWPDHQTSTVHQFNLK------ALPAHKLHKFNISAKNRGLQLMVKQGWDQEHGLGPS-KSGRLYPVKTVLRKQRTGLGIEQQPAR 289
BLAST of jgi.p|Trimin1|155387 vs. uniprot
Match: UPI001F0609FA (G patch domain and ankyrin repeat-containing protein 1 homolog n=2 Tax=Lucilia TaxID=7374 RepID=UPI001F0609FA) HSP 1 Score: 67.8 bits (164), Expect = 8.260e-11 Identity = 35/96 (36.46%), Postives = 57/96 (59.38%), Query Frame = 1 Query: 1 FMCLVCESTITATTSREHESSTMHIFHQKLQSGTSTAPKANLHLTETNAGYRILSKLGWTQDTGLGPSHKQGRLEPIKTVFKQDRTGLGAVKQVPR 288 F C +C+ T+ +H++ST+H F+ K + K N+ N G +++ K GW +++GLGPS + GRL P+KTV ++ RTGLG ++ R Sbjct: 201 FFCEICQENFKETSQVKHQTSTIHQFNMKSNLPQNKLQKFNI--PARNKGLQLMVKQGWDKESGLGPS-QAGRLYPVKTVIRKQRTGLGIEQESAR 293
BLAST of jgi.p|Trimin1|155387 vs. uniprot
Match: A0A0L0BTT0_LUCCU (Putative G patch domain and ankyrin repeat-containing protein 1 n=1 Tax=Lucilia cuprina TaxID=7375 RepID=A0A0L0BTT0_LUCCU) HSP 1 Score: 67.8 bits (164), Expect = 1.010e-10 Identity = 35/96 (36.46%), Postives = 57/96 (59.38%), Query Frame = 1 Query: 1 FMCLVCESTITATTSREHESSTMHIFHQKLQSGTSTAPKANLHLTETNAGYRILSKLGWTQDTGLGPSHKQGRLEPIKTVFKQDRTGLGAVKQVPR 288 F C +C+ T+ +H++ST+H F+ K + K N+ N G +++ K GW +++GLGPS + GRL P+KTV ++ RTGLG ++ R Sbjct: 201 FFCEICQENFKETSQVKHQTSTIHQFNMKSNLPQNKLQKFNI--PARNKGLQLMVKQGWDKESGLGPS-QAGRLYPVKTVIRKQRTGLGIEQESAR 293 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|155387 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_8188 ID=mRNA_8188|Name=jgi.p|Trimin1|155387|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=378bp|location=Sequence derived from alignment at Contig_53:472089..472466- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. TTCATGTGTCTCGTGTGCGAATCTACCATCACAGCCACGACATCCCGAGAback to top protein sequence of jgi.p|Trimin1|155387 >Trimin1|155387|gw1.53.151.1 ID=Trimin1|155387|gw1.53.151.1|Name=jgi.p|Trimin1|155387|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=126bp FMCLVCESTITATTSREHESSTMHIFHQKLQSGTSTAPKANLHLTETNAGback to top mRNA from alignment at Contig_53:472089..472466- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_8188 ID=mRNA_8188|Name=jgi.p|Trimin1|155387|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=378bp|location=Sequence derived from alignment at Contig_53:472089..472466- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_53:472089..472466- >mRNA_8188 ID=mRNA_8188|Name=jgi.p|Trimin1|155387|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=378bp|location=Sequence derived from alignment at Contig_53:472089..472466- (Tribonema minus UTEX_B_3156 )back to top |