mRNA_8159 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|132357 vs. uniprot
Match: A0A835YPS5_9STRA (Histone acetyltransferase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPS5_9STRA) HSP 1 Score: 431 bits (1108), Expect = 4.610e-153 Identity = 207/207 (100.00%), Postives = 207/207 (100.00%), Query Frame = 1 Query: 1 YSAEKLPRSDVGDYVERCVQSVLPAGAPPIAVRFVSNCQKATSIPPPMQATFCAAPGVDLPRSILYTSKALCLFQLIDGAWVMSFMLYTYEYGDDAPACNRGRVYLSYLDSVPYIQPYTCRSVVYKTVLAAYFDWVRRRGFSTVHLWSAPASTLREFAYICWCHPQHHATLDQPALRQWYSDIAGQCQLRGIVSAVTDLYASSFRAL 621 YSAEKLPRSDVGDYVERCVQSVLPAGAPPIAVRFVSNCQKATSIPPPMQATFCAAPGVDLPRSILYTSKALCLFQLIDGAWVMSFMLYTYEYGDDAPACNRGRVYLSYLDSVPYIQPYTCRSVVYKTVLAAYFDWVRRRGFSTVHLWSAPASTLREFAYICWCHPQHHATLDQPALRQWYSDIAGQCQLRGIVSAVTDLYASSFRAL Sbjct: 1 YSAEKLPRSDVGDYVERCVQSVLPAGAPPIAVRFVSNCQKATSIPPPMQATFCAAPGVDLPRSILYTSKALCLFQLIDGAWVMSFMLYTYEYGDDAPACNRGRVYLSYLDSVPYIQPYTCRSVVYKTVLAAYFDWVRRRGFSTVHLWSAPASTLREFAYICWCHPQHHATLDQPALRQWYSDIAGQCQLRGIVSAVTDLYASSFRAL 207
BLAST of jgi.p|Trimin1|132357 vs. uniprot
Match: A0A835YQL1_9STRA (Histone acetyltransferase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQL1_9STRA) HSP 1 Score: 390 bits (1001), Expect = 9.540e-137 Identity = 186/207 (89.86%), Postives = 193/207 (93.24%), Query Frame = 1 Query: 1 YSAEKLPRSDVGDYVERCVQSVLPAGAPPIAVRFVSNCQKATSIPPPMQATFCAAPGVDLPRSILYTSKALCLFQLIDGAWVMSFMLYTYEYGDDAPACNRGRVYLSYLDSVPYIQPYTCRSVVYKTVLAAYFDWVRRRGFSTVHLWSAPASTLREFAYICWCHPQHHATLDQPALRQWYSDIAGQCQLRGIVSAVTDLYASSFRAL 621 YSAEKLP SDVGDY+E CVQSVLPAGAPPIAVR VSNCQKATSIPPPMQATFC APGVDLP SILYTSKALCLFQLI+GAWVMS MLY+YEYGDD+PACNRGRVYLSYLDSV YIQPYTCRSVVYKTVLAAYFDWVRRRGFSTVHLWSAPAS ++EFAYICWCHPQHHATLDQ ALRQWY DI QCQ RGI+SAVT LYASSFRAL Sbjct: 1 YSAEKLPWSDVGDYIESCVQSVLPAGAPPIAVRLVSNCQKATSIPPPMQATFCTAPGVDLPPSILYTSKALCLFQLINGAWVMSLMLYSYEYGDDSPACNRGRVYLSYLDSVTYIQPYTCRSVVYKTVLAAYFDWVRRRGFSTVHLWSAPASNVKEFAYICWCHPQHHATLDQTALRQWYGDIVEQCQRRGIISAVTHLYASSFRAL 207
BLAST of jgi.p|Trimin1|132357 vs. uniprot
Match: A0A836CDY7_9STRA (Histone acetyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDY7_9STRA) HSP 1 Score: 272 bits (696), Expect = 1.680e-89 Identity = 132/207 (63.77%), Postives = 157/207 (75.85%), Query Frame = 1 Query: 1 YSAEKLPRSDVGDY--VERCVQSVLPAGAPPIAVRFVSNCQKATSIPPPMQATFCAAPGVDLPRSILYTSKALCLFQLIDGAWVMSFMLYTYEYGDDAPACNRGRVYLSYLDSVPYIQPYTCRSVVYKTVLAAYFDWVRRRGFSTVHLWSAPASTLREFAYICWCHPQHHATLDQPALRQWYSDIAGQCQLRGIVSAVTDLYASSFR 615 +SAEKLPRSDV DY VE+ VQSVLP GAPP+ +R VSNC A SIP P Q TFCAAPG + + +LYTSKAL LFQLIDGAWVMSFM+Y +EYG DAPACNRGRVY+SYLDSVP++QPY+ RS Y+ L AYFDWVRRRGF TVHL SAP+ + Y+ WCHP+HH T ++ LR WY ++A QCQ GI++A + LY R Sbjct: 21 FSAEKLPRSDVSDYHDVEQRVQSVLPPGAPPVVMRLVSNCHSAVSIPAPFQHTFCAAPGNNPRKRMLYTSKALSLFQLIDGAWVMSFMVYAHEYGHDAPACNRGRVYVSYLDSVPFLQPYSSRSAAYQMKLVAYFDWVRRRGFGTVHLCSAPSGD--DGRYVFWCHPEHHRTRNEDGLRAWYCEVAKQCQSHGIIAASSGLYECGHR 225
BLAST of jgi.p|Trimin1|132357 vs. uniprot
Match: A0A835YIA2_9STRA (Histone acetyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIA2_9STRA) HSP 1 Score: 233 bits (593), Expect = 1.480e-67 Identity = 113/211 (53.55%), Postives = 146/211 (69.19%), Query Frame = 1 Query: 1 YSAEKLPRSDVGDYVERCVQSVLPAGAPPIAVRFVSNCQKATSIPPPMQATFCAAPGVDLPRSILYTSKALCLFQLIDGAWVMSFMLYTYEYGDDAPACNRGRVYLSYLDSVPYIQPYTCRSVVYKTVLAAYFDWVRRRGFSTVHLWSAPASTLREFAYICWCHPQHHATLDQPALRQWYSDIAGQCQLRGIVSAVT----DLYASSFRAL 621 YSAE+LPRSDVGD++E V++ PA APP+AVR VSN + A +PPP+ ATF AAPG LP I Y+SKALC+FQ I+G WV+ F++Y EY DAPACNRGR Y+SY+DS + QP + R+ YK + AY DWVRRRGF +HLWSAP +Y+ WCHP+H AT + LR+WY +A +CQ GIV T +LY +SF+ + Sbjct: 497 YSAERLPRSDVGDFMELRVKNTQPADAPPLAVRLVSNTKLAMLVPPPVWATFRAAPGQPLPHVIPYSSKALCMFQQINGLWVLCFVMYVQEYSGDAPACNRGRAYISYIDSAAHWQPSSARTAAYKEFVVAYADWVRRRGFGWIHLWSAPPQ--EGASYVLWCHPEHQATPEPDMLRRWYHAVASRCQALGIVRNFTAERSNLYHASFQVI 705
BLAST of jgi.p|Trimin1|132357 vs. uniprot
Match: A0A835Z7S7_9STRA (Histone acetyltransferase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7S7_9STRA) HSP 1 Score: 205 bits (522), Expect = 6.330e-64 Identity = 106/204 (51.96%), Postives = 132/204 (64.71%), Query Frame = 1 Query: 1 YSAEKLPRSDVGDYVERCVQSVLPAGAPPIAVRFVSNCQKATSIPPPMQATFCAA----PGV-----DLPRSILYTSKALCLFQLIDGAWVMSFMLYTYEYGDDAPACNRGRVYLSYLDSVPYIQPYTCRSVVYKTVLAAYFDWVRRRGFSTVHLWSAPASTLREFAYICWCHPQHHAT----LDQPALRQWYSDIAGQCQLRG 573 YSAE+LPRSD+GDY+E+ V++ PAG PIAVR V+N Q A +PPP++ATFCAA PG LP +I YTSK LCLFQ ++G WV+ F++YT EYG DAPACNR R Y++Y+DS+ + QP + RS YK +L Y DWVR R F VHLWSAP +Y+ WC PQH LRQWY IA C+ G Sbjct: 1 YSAEQLPRSDIGDYIEQRVKATQPAGTSPIAVRLVTNKQLAMVVPPPIRATFCAAARELPGGIVQRDPLPEAIEYTSKVLCLFQEVNGLWVLLFIVYTQEYGADAPACNRARAYIAYVDSIAHWQPCSRRSAAYKEMLVGYIDWVRLRSFRRVHLWSAPPQ--EGDSYVLWCRPQHQPPPPPRTQHAWLRQWYHSIARGCEALG 202
BLAST of jgi.p|Trimin1|132357 vs. uniprot
Match: A0A835Z592_9STRA (Histone acetyltransferase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z592_9STRA) HSP 1 Score: 209 bits (533), Expect = 6.950e-64 Identity = 112/229 (48.91%), Postives = 146/229 (63.76%), Query Frame = 1 Query: 1 YSAEKLPRSDVGDYVERCVQSVLPAGAPPIAVRFVSNCQKATSIPPPMQATFCAA----PGV-----DLPRSILYTSKALCLFQLIDGAWVMSFMLYTYEYGDDAPACNRGRVYLSYLDSVPYIQPYTCRSVVYKTVLAAYFDWVRRRGFSTVHLWSAPASTLREFAYICWCHPQHHAT----LDQPALRQWYSDIAGQCQL---------RGIVSAVTDLYASSFRAL 621 YSAE+LPRSDVGDY+E+ V++ P G IAVR ++N Q A +PPP++ATFCAA PG LP +I YTSK LCLFQ ++G WV+ F++YT EYG DAP CNRGR Y++Y+DS+ + QP + RS Y+ +L Y DWVR RGF VHLWSAP S + +Y+ WC PQH LRQWY IA +C+ GIV+A ++LY +SF + Sbjct: 81 YSAEQLPRSDVGDYIEQRVKATQPPGTSRIAVRLITNKQLAMVVPPPIRATFCAAARELPGGIVARDPLPEAIEYTSKVLCLFQEVNGLWVLLFIVYTQEYGADAPLCNRGRAYIAYVDSIAHWQPCSRRSAAYREMLVGYIDWVRLRGFRWVHLWSAPPS--KGDSYVLWCRPQHQPPPPPRTQHAWLRQWYHSIAQRCEELGCVRDFINEGIVNAGSNLYDTSFAGI 307
BLAST of jgi.p|Trimin1|132357 vs. uniprot
Match: A0A835ZGH1_9STRA (Histone acetyltransferase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGH1_9STRA) HSP 1 Score: 164 bits (414), Expect = 2.570e-43 Identity = 92/215 (42.79%), Postives = 123/215 (57.21%), Query Frame = 1 Query: 1 YSAEKLPRSDVGDYVERCVQSVLPA-GAPP----IAVRFVSNCQKATSIPPPMQATFC----AAPGVDLPRSILYTSKALCLFQLIDGAWVMSFMLYTYEYGDDAPACNRGRVYLSYLDSVPYIQPYTCRSVVYKTVLAAYFDWVRRRGFSTVHLWSAPASTLREFAYICWCHPQHHATLDQPALRQWYSDIAGQCQLRGIVSAVTDLYASSFRA 618 YSA LPR + D++E V L G PP I++R VS+ + ++ TF A PG +PR + Y SKALC+FQ IDGA V F +Y E+G DAP+ N RVY++YLDSV Y +P R+ VY +LAAY DW RRRGF T H+WS P F I W HP+H T + L WY + +C+ G+V AV +L+ + F+A Sbjct: 400 YSAAALPRCAMSDFIELHVLRRLDELGMPPPPGSISIRVVSSITATHDVSSVVRRTFKPGGGAPPGACIPRELSYASKALCMFQCIDGAEVCLFSMYVQEHGADAPSFNARRVYVAYLDSVEYFRPRAARTHVYHEILAAYLDWARRRGFRTAHIWSCPPQRGNNF--IFWAHPEHQKTPTRERLMTWYRLMLRRCEALGVVHAVENLHTTHFQA 612
BLAST of jgi.p|Trimin1|132357 vs. uniprot
Match: A0A836CF44_9STRA (Histone acetyltransferase (Fragment) n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CF44_9STRA) HSP 1 Score: 152 bits (385), Expect = 2.430e-42 Identity = 80/201 (39.80%), Postives = 118/201 (58.71%), Query Frame = 1 Query: 1 YSAEKLPRSDVGDYVERCVQSVLPAGAPPIAVRFVSNCQKATSIPPPMQATFCA-APGVDLPRSILYTSKALCLFQLIDGAWVMSFMLYTYEYGDDAPACNRGRVYLSYLDSVPYIQPYTCRSVVYKTVLAAYFDWVRRRGFSTVHLWSAPASTLREFAYICWCHPQHHATLDQPALRQWYSDIAGQCQLRGIVSAVTDLY 600 Y A+ LP S + ++E +LP+G+P + VR ++N ++A +P +QATF A G P +I YT+K + +FQ +DG WV+ F+L +EYG DAP NRGRVY+SYLDSVP++ P R+ +++ VL AY D RRRGF+ HLW ++ ++ P H T DQ L W ++A GI + TD + Sbjct: 56 YCAKSLPSSVLDRHLEEQANRLLPSGSPKVVVRMLANTRRAFYVPAQVQATFAVDATGSSPPPTIPYTAKTIGVFQELDGVWVLFFVLMAHEYGADAPLANRGRVYISYLDSVPFMWPCHARTALFQGVLHAYLDCSRRRGFTKAHLWVCAPGEGSQYLFLQ--RPPHQKTPDQKGLEAWNGNMASGAVAAGIATDFTDFF 254
BLAST of jgi.p|Trimin1|132357 vs. uniprot
Match: A0A6H5L4V8_9PHAE (Histone acetyltransferase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4V8_9PHAE) HSP 1 Score: 147 bits (372), Expect = 2.240e-37 Identity = 80/216 (37.04%), Postives = 113/216 (52.31%), Query Frame = 1 Query: 1 YSAEKLPRSDVGDYVERCVQSVLP-----AGAPPIAVRFVSNCQKATSIPPPMQATFCAAPGV-------DLPRSILYTSKALCLFQLIDGAWVMSFMLYTYEYGDDAPACNRGRVYLSYLDSVPYIQPYTCRSVVYKTVLAAYFDWVRRRGFSTVHLWSAPASTLREFAYICWCHPQHHATLDQPALRQWYSDIAGQCQLRGIVSAVTDLYASSF 612 Y+A LP + + Y+E V+ L A A +++R +SN + + ++ TFC G+ ++P + Y SKAL +FQ +DG V F +Y EYG DAP N R Y+SYLDSV Y +P R+ VY +L AY DW+RRRGF H+WS P F I WCHP H T + L WY ++ + G+ + VT L + F Sbjct: 1365 YAASSLPHTPLSRYIESRVRQRLAKLEDEAAASTLSIRLISNVEATCEVHSVLRETFCCKDGLGVGPNKNEVPELLKYRSKALSMFQRVDGVEVCLFSMYVQEYGADAPYFNARRAYISYLDSVEYFRPRKHRTAVYHEILVAYLDWLRRRGFKAAHIWSCPPQRGNNF--IFWCHPLHQKTPTRDRLSGWYGNMLKRAVQLGVAAKVTTLDKTHF 1578
BLAST of jgi.p|Trimin1|132357 vs. uniprot
Match: A0A835Z778_9STRA (Histone acetyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z778_9STRA) HSP 1 Score: 133 bits (334), Expect = 3.410e-36 Identity = 67/117 (57.26%), Postives = 83/117 (70.94%), Query Frame = 1 Query: 1 YSAEKLPRSDVGDYVERCVQSVLPAGAPPIAVRFVSNCQKATSIPPPMQATFCAAPGVDLPRSILYTSKALCLFQLIDGAWVMSFMLYTYEYGDDAPACNRGRVYLSYLDSVPYIQP 351 YSAE+L RSDV DY+E V++ PAG PIAVR VSN + A +PPP+ ATFCAA LP TS+ALCL Q ++G WV+ F+ YT EY DAP CNRGRVY++Y+DSV + QP Sbjct: 18 YSAEQLARSDVSDYIEDRVKATQPAGTSPIAVRLVSNKELAMRVPPPIPATFCAAERDPLPARSKCTSQALCLSQEVNGLWVLLFIKYTQEYRADAPPCNRGRVYIAYIDSVAHSQP 134 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|132357 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_8159 ID=mRNA_8159|Name=jgi.p|Trimin1|132357|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=621bp|location=Sequence derived from alignment at Contig_53:245076..245696+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. TACTCAGCCGAGAAGCTGCCCCGCTCGGACGTTGGGGACTACGTCGAACGback to top protein sequence of jgi.p|Trimin1|132357 >Trimin1|132357|gw1.53.43.1 ID=Trimin1|132357|gw1.53.43.1|Name=jgi.p|Trimin1|132357|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=207bp YSAEKLPRSDVGDYVERCVQSVLPAGAPPIAVRFVSNCQKATSIPPPMQAback to top mRNA from alignment at Contig_53:245076..245696+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_8159 ID=mRNA_8159|Name=jgi.p|Trimin1|132357|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=621bp|location=Sequence derived from alignment at Contig_53:245076..245696+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_53:245076..245696+ >mRNA_8159 ID=mRNA_8159|Name=jgi.p|Trimin1|132357|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=621bp|location=Sequence derived from alignment at Contig_53:245076..245696+ (Tribonema minus UTEX_B_3156 )back to top |