mRNA_8039 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|64909
Unique Name	mRNA_8039
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|64909 vs. uniprot
Match: A0A835YTF7_9STRA (Glycoside hydrolase superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTF7_9STRA)

HSP 1 Score: 1365 bits (3532), Expect = 0.000e+0
Identity = 700/700 (100.00%), Postives = 700/700 (100.00%), Query Frame = 3

Query:   45 MALKAALLICSLGSSAHLSFAGSLRGTVNTDARQQQPGRKLPPQSLPVPAYEKIFPGLMVVENFEKGAEGWVAECADVAEWVQVGQPGVPPPRTPGTKGMYRFTGANQPLCSSLNFVVPGANFQPGEAYHLAAWVYLPQYDCTDEITSLKCPYLKYQADGIEDGAGTLLTRIPNRWNAMSGTVVSQGGDLTILIKQLPMGTTVYIDDVWLTNCSLDNFRAYSLPKIADLRKRDVALQIGPGIAGQATITMTRHEYPFGATLASPDLDNVAGLADLFLQHFNAITDEYEQKWPQTEPQQGQFAWDGGDAIYDFAVQNDLGMRGHDIFAEGGGPDWLANLPADGSANSVQAAIWQRLNDYIERYDKHVINYDVVNEITHFNKMITLLPCKPNGEGCMCQYKPACAGMALAINTPWWTWAWAATKHVLTLRGSGNKGLYQNDYCTASFCGAPNGISNMVRLQPIVGNTGYGNQLHQGLAKGTCGFDLHMRIDESTRATPGTDWWFTEFDINDPDVLLRADGYEMGYLAGFSHPKNMGITLWGWAKETVAFDQDARPYTSLLDSLDTLQFNPAGDRVLGDDGLLQSTFKSTYTQAIPATGGTMLMNLFKGDYQVALGGCTANFKVLSDLPLQAGNLKWTCPAGAPAAATARVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGDPYDPYAAPA 2144
            MALKAALLICSLGSSAHLSFAGSLRGTVNTDARQQQPGRKLPPQSLPVPAYEKIFPGLMVVENFEKGAEGWVAECADVAEWVQVGQPGVPPPRTPGTKGMYRFTGANQPLCSSLNFVVPGANFQPGEAYHLAAWVYLPQYDCTDEITSLKCPYLKYQADGIEDGAGTLLTRIPNRWNAMSGTVVSQGGDLTILIKQLPMGTTVYIDDVWLTNCSLDNFRAYSLPKIADLRKRDVALQIGPGIAGQATITMTRHEYPFGATLASPDLDNVAGLADLFLQHFNAITDEYEQKWPQTEPQQGQFAWDGGDAIYDFAVQNDLGMRGHDIFAEGGGPDWLANLPADGSANSVQAAIWQRLNDYIERYDKHVINYDVVNEITHFNKMITLLPCKPNGEGCMCQYKPACAGMALAINTPWWTWAWAATKHVLTLRGSGNKGLYQNDYCTASFCGAPNGISNMVRLQPIVGNTGYGNQLHQGLAKGTCGFDLHMRIDESTRATPGTDWWFTEFDINDPDVLLRADGYEMGYLAGFSHPKNMGITLWGWAKETVAFDQDARPYTSLLDSLDTLQFNPAGDRVLGDDGLLQSTFKSTYTQAIPATGGTMLMNLFKGDYQVALGGCTANFKVLSDLPLQAGNLKWTCPAGAPAAATARVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGDPYDPYAAPA
Sbjct:    1 MALKAALLICSLGSSAHLSFAGSLRGTVNTDARQQQPGRKLPPQSLPVPAYEKIFPGLMVVENFEKGAEGWVAECADVAEWVQVGQPGVPPPRTPGTKGMYRFTGANQPLCSSLNFVVPGANFQPGEAYHLAAWVYLPQYDCTDEITSLKCPYLKYQADGIEDGAGTLLTRIPNRWNAMSGTVVSQGGDLTILIKQLPMGTTVYIDDVWLTNCSLDNFRAYSLPKIADLRKRDVALQIGPGIAGQATITMTRHEYPFGATLASPDLDNVAGLADLFLQHFNAITDEYEQKWPQTEPQQGQFAWDGGDAIYDFAVQNDLGMRGHDIFAEGGGPDWLANLPADGSANSVQAAIWQRLNDYIERYDKHVINYDVVNEITHFNKMITLLPCKPNGEGCMCQYKPACAGMALAINTPWWTWAWAATKHVLTLRGSGNKGLYQNDYCTASFCGAPNGISNMVRLQPIVGNTGYGNQLHQGLAKGTCGFDLHMRIDESTRATPGTDWWFTEFDINDPDVLLRADGYEMGYLAGFSHPKNMGITLWGWAKETVAFDQDARPYTSLLDSLDTLQFNPAGDRVLGDDGLLQSTFKSTYTQAIPATGGTMLMNLFKGDYQVALGGCTANFKVLSDLPLQAGNLKWTCPAGAPAAATARVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGDPYDPYAAPA 700

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BLAST of jgi.p|Trimin1|64909 vs. uniprot
Match: A0A835YHL6_9STRA (Glycoside hydrolase superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YHL6_9STRA)

HSP 1 Score: 561 bits (1447), Expect = 2.070e-185
Identity = 302/677 (44.61%), Postives = 373/677 (55.10%), Query Frame = 3

Query:  432 HLAAWVYLPQYDCTDEITSLKCPYLKYQADGIEDGAGTLLTRIPNRWNAMSGTV----------------------------------------VSQGGDLTILIKQLPMGTTVYIDDVWLTNCSLDNFRAYSLPKIADLRKRDV--------------------------------------------------------------------------ALQIGPGIAGQ--ATITMTRHEYPFGATLASPDLDNVAGLADLFLQHFNAITDEYEQKWPQTEPQQGQFAWDGGDAIYDFAVQNDLGMRGHDIFAEGGGPDWLANLPADGSANSVQAAIWQRLNDYIERYDKH-----------------VINYDVVNEITHFNKMITLLPCKPNGEGCMCQYKPACAGMALAINTPWWTWAWAATKHVLTLRGSGNKGLYQNDYCTASFCGAPNGISNMVRLQPIVGNTGYGNQLHQGLAKGTCGFDLHMRIDESTRATPGTDWWFTEFDINDPDVLLRADGYEMGYLAGFSHPKNMGITLWGWAKETVAFDQDARPYTSLLDSLDTLQFNPAGDRVLGDDGLLQST----------------------------FKSTYTQAIPATGGTMLMNLFKGDYQVALGGCTANFKVLSDLPLQAGNLKWTC-PAGAPAAA 1976
            + A W++LP+ DC  +  S+ CPY K+Q+D  EDG+G L T    +WN ++  V                                          +G DLTIL+KQLP    VY+DD+ LT CS+DNFR Y++PK A L +R V                                                                          +L I  G      AT+TMTRHEYPFGAT  + +L     L D F++HFN ITDEY QKW + EP++G F +  GD IY+FA+ NDL MRGHDIFAEGGGP WLA LPADGSA SVQ+ IW+RLN  +ERYD                   +INYDVVNEITHFNK         +G GCMCQYKPAC GM L + TPWWTWAW AT+++L  RGSG K L+QND+CT  +CG  N  SNMV+LQP+ GN  YG Q+HQG+AK  CGFD+H+R+ E+T+ATPGT WWFTE+D++DPD+  RADGYEMGYLA +SH +  G  LWGWAKET+A DQD RP TSL+   +T+  N AG+RV GD+G+L                               F S YTQA+PA GGT+ M LFKGDY V LG CTA F+VL+D P+ A  L W C P   PAAA
Sbjct:    8 YTAVWIWLPKCDCITDFGSINCPYTKFQSDFNEDGSGVLATARAGQWNVITCVVHAXXXXXXXXXXXXXXXTGVSXXXXXXXXXXXXXXXXVVRTEEGTDLTILVKQLPPNVDVYMDDISLTYCSVDNFRTYAMPKTAALLERGVTYAMPKIDAXXXXXXXXXXXXXXXXXXXXXLRKRAIDALXXXXXXXXXXKIDALRKRXXXXXXXXXXXXXXXXXSLTIDAGGKADEVATVTMTRHEYPFGATTTAWELQAHPALKDFFIKHFNTITDEYTQKWVEQEPEEGVFDFVNGDGIYNFAIDNDLDMRGHDIFAEGGGPAWLAALPADGSARSVQSHIWRRLNMLLERYDAKXXXXXXXXXXXXXXXXXIINYDVVNEITHFNKA--------DGTGCMCQYKPACDGMGLPLTTPWWTWAWTATRYLLKQRGSGAKKLFQNDFCTGHYCGPHNSPSNMVKLQPVAGNDVYGMQMHQGIAKKMCGFDIHLRVTETTKATPGTSWWFTEYDVDDPDLQQRADGYEMGYLAAYSHAQVEGFMLWGWAKETIAPDQDGRPNTSLIQDFNTMGLNAAGERVFGDNGVLTKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXFVSQYTQAVPADGGTLAMRLFKGDYTVTLGACTAQFRVLTDRPV-AKKLVWACAPEADPAAA 675

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BLAST of jgi.p|Trimin1|64909 vs. uniprot
Match: A0A836CG56_9STRA (WSC domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CG56_9STRA)

HSP 1 Score: 273 bits (697), Expect = 2.060e-74
Identity = 212/665 (31.88%), Postives = 297/665 (44.66%), Query Frame = 3

Query:  231 NFEKGAEG---WVAECADVAEWVQVGQPGVPPPRTPGTKGMYRFTGANQPLCS----SLNFVVPGANFQPGEAYHLAAWVYLPQYD-CTDEITSLKCPYLKYQADGIEDGAGTLLTRIPNRWNAMSGTVVSQGG--DLTILIKQLPMGTTVYIDDVWLTNCSLDNFRAYSLPKIADLRKRDVALQIG------------PGIAG-QATITMTRHEYPFGATLASPDLDNVAGLADLFLQHFNAITDEYEQKWPQTEPQQGQFAWDGGDAIYDFAVQNDLGMRGHDIFAEGGG--PDWLANLPADGSANSVQAAIWQRLNDYIERYDKHVINYDVVNEITHFNKMITLLPCKPN--------GEGCMCQYKPACA-GMALAINTPWWTWAWAATKHVLTLRGSGNKGLYQNDYCTASFCGAPNGISNMVR-LQPIVGNTGYGNQLHQGLAKGTCGFDLHMRIDESTRATPGTDW----------------WFTEFDINDPDVLL----RADGYEMGYLAGFSHPKNMGITLWGWAKETVAFDQDARPYTSLLDSLDTLQFNPAGDRVLGDDGLLQSTFKSTYTQAIPATGGT----------------MLMNLFKGDYQVALGGCTANFKVLSDLPLQAGNLK-------WTCP--AGAPAAATAR 1985
             FE   +G   W   C  VAE V  G     P        M R T A    CS    SL+  V G +      YH+  +++LP    C     S  CP L +Q+D +   AGT +T I   WN +SGT+ + G    +T+LI  LP+G  V+IDDV +  C LD+FRAYS  + A +R+R V + +G            P ++  +A + M RH +P G  +  P   + AG  D F +HFN +  E+  KW Q EPQ G +     DA+        LG RGH ++ E     P WL +L ADG   S+Q AIW+R+ ++  RY     NYDV NE+ H N   + LPC  +           CMC Y  AC  GM L  +    TW ++A  +++     G++ L+ NDYC    CG  N +S++V+ +  +   T  G+Q H    K  CGF+L  R   +  A  G  +                W TE D+   D  L    RADGYE  Y A F+ P   G+ +W W+      D   +P +SL ++   L +  AG R+LG  GL+   + ST      A G                  +L     G Y++ + GC   F V    PL  G+         W C    GAP  A AR
Sbjct:   43 GFEDPVDGNLNWQVTCTTVAERVTTGASSGGPAAPKSGAYMLRITAAAASSCSNVKASLSQAVTGMDADV--PYHVKFYMWLPAGSKCASSTGSDLCPQLSFQSD-VYKSAGTSVTAIAGAWNLVSGTIYATGAATSVTLLIDNLPVGEDVWIDDVAVQRCGLDDFRAYSRAETARVRERSVTINLGAPRARTGDGAAPPAVSDLRADVVMLRHAFPLGGAMR-PSCPSEAGCLDFFREHFNYVVPEFGVKWHQQEPQSGVYN-PLTDAMTAAVRHLGLGYRGHAVYWEVAAKQPAWLPDLAADGKEGSLQWAIWRRMKEFDLRYATIFDNYDVNNEMLHGNFFTSRLPCDTSVRDAKGVAASPCMCDYADACPDGMKLPKDVDIHTWMYSAMAYLIP----GSR-LHTNDYCMTEACGKSNALSSLVKQMLALPAATAMGSQAHVRTGKSICGFNLMDRFSHAVAAINGLPFDGSASREALAAAKRKMWITELDVQASDSDLNEEQRADGYETFYRAAFASPAVDGLLMWSWS------DIQGQPSSSLANAAYKLVYL-AGQRILGAAGLVHGEWNSTQMAQPLAAGAAAPNDDNASSEPTGESHLLFTALPGTYELRIAGCATAFTV----PLGRGSAAFDVAAAGWRCADGGGAPVDAPAR 686

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BLAST of jgi.p|Trimin1|64909 vs. uniprot
Match: A0A836CFE3_9STRA (Glycoside hydrolase superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFE3_9STRA)

HSP 1 Score: 239 bits (611), Expect = 3.680e-65
Identity = 185/629 (29.41%), Postives = 280/629 (44.52%), Query Frame = 3

Query:  252 GWVAECADVAEWVQVGQ--PGVPPPRTPGTKGMYRFTGANQPLCSSLNFVVPGANFQPGEAYHLAAWVYLPQYDCTDEITSLKCPYLKYQADGIED--GAGTLLTRIPNRWNAMSGTVVSQGGDLTILIK--QLPMGTTVYIDDVWLTNCSLDNFRAYSLPKIADLRKRDVALQIGP----GIAGQATITMTRHEYPFGATLASPDLDNVAGLADLFLQHFNAITDEYEQKWPQTEPQQGQFAWDGGDAIYDFAVQNDLGMRGHDIF---------------AEGGGPDWLA---NLPADGSANSVQAAIWQRLNDYIERYDKHVINYDVVNEITHFN---------KMITLLPCKPNGEGCMCQYKPACAGMALAINTPWWTWAWAATKHVLTLRGSGNKGLYQNDYCTASFCGAPNGISNMVRLQPIVGNT-GYGNQLHQGLAKGTCGFDLHMRIDESTRAT---------PGTDW-------WFTEFDINDPDVLLRADGYEMGYLAGFSHPKNMGITLWGWAKETVAFDQDARPYTSLLDSLDTLQFNPAGDRVLGDDGLLQSTFKSTYTQAIPATGGTMLMNLFKGDYQVALGGCTANFKVLSDLPLQAGNLK-----WTCPAG 1961
            GW   CAD +     G   PG P     G   M+ F  A+   C     +      +P   YH+  +++LP+  CT EI S  CP L Y+    ++  GAG  +T + + WN +SGT+ + G   T+ ++  ++P G  V++DD+ ++ C+L++FR  S  ++ ++RKR V L++G     G    A I+MT+H YPFGA +      + A L D F Q+FN  T +   KW ++EP  G F  D  + + +     D+G+RGH +F                E   P   A    LP DGS  S+Q+A++ RL  ++ RY     N DV NE+ H +         +M  LL   P+  GC    +   A   +A   P                   +K  + ND+C   +CG    +S++V+      +  G G Q H    K  CGFDL  R D +             P  D        W TE D  D D+  RA+ YE  Y A ++     G+ +WGWA+    +    RP   ++D  +       G+R+   DGLL S + ST +  +     T+  + F G Y V +G C A+F V    PL  G L      W+C  G
Sbjct:   60 GWETTCADPSSGRVTGGEVPGGPDSAKSGD-WMFYFKAADS--CPETIKLSQTITLEPNTPYHVMLYIWLPESTCTTEIASSDCPQLLYRRIDTDEFTGAGVTITAVGDSWNLISGTMWTAGDTNTVELRLQEIPPGAEVWVDDIIMSRCTLEDFRPVSERRVDEIRKRSVELKLGGDFGNGTDVTADISMTKHGYPFGAAMWDGCATDSACL-DFFRQNFNFATAKESMKWKESEPAPGVFT-DADEKVLNAVKDLDIGLRGHTVFWDVPIQVFMNSRIDARERCAPALCALPQTLPRDGSEGSLQSAMYARLLRFVSRYGDVTANDDVDNEMLHGSFFKVVQDDVRMAVLLQVAPSVHGC----ERVIAAQQMAYLQP-------------------DKRRFLNDFCMMVYCGPDITLSSLVKQSKTFPDANGLGLQSHVTSGKEVCGFDLLARFDHAVAVANDKTSEVPLPQEDLIGLEKKIWVTEMDSQDTDLFWRANAYESFYRAAYASAGVDGMMVWGWARHPGQW----RPDQEMVD--ENFNLLEPGERIFAADGLLHSEWNSTVSD-VSIEDTTVSFDAFPGSYSVEVGDCVADFTV----PLGIGGLTVEVDAWSCAGG 649

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BLAST of jgi.p|Trimin1|64909 vs. uniprot
Match: A0A836CIY0_9STRA (Glycoside hydrolase superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIY0_9STRA)

HSP 1 Score: 218 bits (554), Expect = 1.550e-57
Identity = 162/539 (30.06%), Postives = 243/539 (45.08%), Query Frame = 3

Query:  537 AGTLLTRIPNRWNAMSGTVVSQG-GDLTILIKQLPMGTTVYIDDVWLTNCSLDNFRAYSLPKIADLRKRDVALQIGPGIAGQATITMTRHEYPFGATLASPDLDNVAGLADLFLQHFNAITDEYEQKWPQTEPQQGQFAWDGGDAIYDFAVQNDLGMRGHDIFAEGGG--PDWLANLPADGSANSVQAAIWQRLNDYIERYDKHVINYDVVNEITHFNKMITLLPCKPNGEGCMCQYKPACA-GMALAINTPWWTWAWAATKHVLTLRGSGNKGLYQNDYCTASFCGAPNGISNMVR---LQPIVGNTGYGNQLHQGLAKGTCGFDLHMRIDESTRATPGTD----------------WWFTEFDIND-----------------PDVLLRADGYEMGYLAGFSHPKNMGITLWGWAKETVAFDQDARPYTSLLDSLDTLQFNPAGDRVLGDDGLLQSTFKSTYTQAIPATGGT---------------MLMNLFKGDYQVALGGCTANFKVLSDL-PLQAGNLKWTCPAGAPAAATAR 1985
            AGT +T + N+WN +SG V +   G +T+ +  LP    V++DD  + +CS+D F       +    KR+ +++    +  +A I M +H +P GA +    ++N       F +HFN    E   KW    P++ +F  D G  I           R H  + E       W+ + P DGS+ S+QAA+W R+NDY+ RY     N+DV NE+ H       LPCK   + C+C Y  AC  GM         +W + A +++L   G   K L+ NDYC  ++C + + +SN+V+   L P +  TG G Q H   AK  CGF+L  R D +T A  G                   W TEFD+ +                  D  LR  GYEM Y A ++     G+  WGW++ +       RP  +++D+  T  ++PA  R+LG  GL  + + STY      TG                 +  + F G+Y++ +GGCT  F V   + PL      W C  G  A A  R
Sbjct:    3 AGTTVTAVANQWNLISGAVYADSTGKITLQLVNLPSDADVWLDDFMIQDCSMDRFSV--TVNLGAPAKRNSSVKETATL--KANIIMQKHAFPLGAAMYYDCMNNPK-CTSFFKKHFNWGVTEVGSKWGDEYPERNRFK-DWGMEISAAITGTGAKYRAHSTYWEVNKRVQQWVKDAPLDGSSESLQAALWWRVNDYVSRYKGKAQNWDVNNEMLHGQFFANKLPCKGGAKPCICDYAAACPPGMGADRYIDVRSWMFKAMRYLL---GPTAK-LHTNDYCNMNYCTSSSALSNLVKQSLLYPEL--TGMGVQSHLSNAKSVCGFNLMARFDHATAALNGRPADGSLSPHDIFKLKKKMWVTEFDVQEIXXXXXXXXXXXXXXXESDHNLRGQGYEMMYRAAYASAGVEGVMAWGWSQPS-----QWRPDIAMVDNDFTTNWDPAR-RILGPTGLFHAEWNSTYYGKALETGRASPNKTPAKTQTQESHIQFSAFPGEYRLEVGGCTTQFTVPVGMGPLAVDARAWKCRRGKRALAAPR 523

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BLAST of jgi.p|Trimin1|64909 vs. uniprot
Match: A0A835ZB14_9STRA (Glycoside hydrolase superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZB14_9STRA)

HSP 1 Score: 209 bits (532), Expect = 1.000e-55
Identity = 161/532 (30.26%), Postives = 241/532 (45.30%), Query Frame = 3

Query:  414 QPGEAYHLAAWVYLPQYDCTDEITSLKCPYLKYQADGIED--GAGTLLTRIPNRWNAMSGTVVSQGGDLTILIK--QLPMGTTVYIDDVWLTNCSLDNFRAYSLPKIADLRKRDVALQIGPGIAGQ---ATITMTRHEYPFGATLASPDLDNVAGLADLFLQHFNAITDEYEQKWPQTEPQQGQFAWDGGDAIYDFAVQN-DLGMRGHDIFAEGGGPDWLANLPADGSANSVQA--AIWQRLNDYIERYDKHVINYDVVNEITH--FNKMITLLPCKPNGEGCMCQYKPACAGMALAINTPWWTWAWAATKHVLTLRGSGNKGLYQNDYCTASFCGAPNGISNMVR-LQPIVGNTGYGNQLHQGLAKGTCGF-DLHMRIDESTRATPGTDWWFTEFDINDPDVLLRADGYEMGYLAGFSHPKNMGITLWGWAKETVAFDQDARPYTSLLDSLDTLQFNPAGDRVLGDDGLLQSTFKSTYTQAIPATGGTMLMNLFKGDYQVALGGCTANFKVLSDLPLQAGNL-----KWTC 1952
            +P   YH+  +++LP+ +CT EI S KCP L Y     ++  GAG  +T + N WN +SGT+ + G   T+ ++   +P+G  V++DDV L+ C +++FR  S  ++ ++RKR V LQ+G    G    A ITM +HEYPFG  +          L   F +HFN  T E   KW ++EP+ G +     D +   AV   DL +RGH +F       W   L        VQ   A++ R+  Y  +Y    +N DV NE+ H  F K + + P                       N    TWA+    +++       K L+ NDYC   +CG    +S++++  +      G G Q H  +A G  G   +  +I            W TE D  D D+  R D YE  Y A ++     G+ +WGWA+     D   RP   ++D  +   F   G R+  DDGLL S + ST    +      +  + F G Y V +G C  +FKV    PL  G +      W C
Sbjct:    9 EPYVPYHIMLYIWLPESECTTEIASTKCPQLLYHRVDTDEYTGAGVTVTAVGNNWNLISGTIWTAGDTNTVELRLQDIPLGAEVWVDDVILSRCGMEDFRPVSQRRVDEVRKRTVQLQLGDYGGGPDCTADITMKKHEYPFGGAMWDKCATEPECLK-FFKKHFNYATAEQSMKWKESEPELGVYTHT--DELVLAAVDKLDLKLRGHTVF-------WEVPL-------QVQDWWAMYHRIKRYTNKYGDVTVNDDVDNEMLHGSFFKELGVAP-----------------------NVDVQTWAYKMMAYLVP-----GKTLFLNDYCMLVYCGPDITLSSIIKQAKGFPEAKGIGLQSH--VAGGKEGLLQMERKI------------WVTEMDSQDTDLHWRGDAYESFYRAAYASAGVGGMLVWGWARH----DGQWRPDQEMVD--ENFNFLEPGQRIFADDGLLHSEWNST-RHDVYFDDSKVYFDAFPGSYTVEVGDCVGHFKV----PLGMGEMTAVADNWKC 470

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BLAST of jgi.p|Trimin1|64909 vs. uniprot
Match: A0A836CK16_9STRA (Glycoside hydrolase superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CK16_9STRA)

HSP 1 Score: 174 bits (441), Expect = 6.170e-43
Identity = 167/558 (29.93%), Postives = 234/558 (41.94%), Query Frame = 3

Query:  414 QPGEAYHLAAWVYL-PQYDCTDEITSLKCPYLKYQADGIEDGAGTLL-------TRIPNRWNAMSG----TVVSQGGDLTILIKQLPMGTTVYIDDVWLTNCSLDNFRAYSLPKIADLRKRDVALQIGP--GIAGQATITMTRHEYPFGATL-ASPDLDNVAG--LADLFLQHFNAITDEYEQKWPQTEPQQGQFAWDGGDAIYDFAVQNDLGMRGHDIFAE-----GGGPDWLANLPADGSANSVQAAIWQRLNDYIERYDKHVINYDVVNEITHFNKMITLLPCKPNGEGCMCQYKPACAGMALAINTPWWTWAWAATKHVLTLRGSGNKGLYQNDYCTASFCGAPNGISNMVRLQPIVGN---------TGYGNQLHQGLAKGTCGFDLHMRIDESTRATPGTDW--WFTEFDINDPDVLLRADGYEMGYLAGFSHPKNMGITLWG------WAKETVAFDQDARPYTSLLDSLDTLQFNPAGDRVLGDDGLLQSTFKSTYTQAIPATGGTMLMNLFKGDYQVALGGCTANFKV-LSDLPLQAGNLKWTCPAGAP 1967
            + G  YH+ A V+L P   C   I +  CPYL    D    G G LL       T     WN +SG    T     G L + I  L  G  V +DDV +   +L++FR  S   I  LRKRDV L IG   G+A    I  TR  +P G+ L     +D V G      F ++FN   DEY            +  +D    + +F    D+  RGH I  E      GG D +   P DG+   +QA + +R+  ++ +Y   V++ + +NE+ +      +LPC   G  C+C Y PAC      +       AWA  K   +L  +    L  N+YC   FC      SN+      V N         TG  +Q H  L   T G D  +++  S +   G D   W +EFD++DPD + +ADGYE    A F+ P   GI LWG      W K+    +Q                    G+R+ G +GLL   + +T   A+  T  T+        Y  A G C A F+V +   P+      W C AG P
Sbjct:   10 EAGAPYHVTANVWLAPNSACALAIDNSLCPYLAVTTDDPASGGGNLLVGGGNLVTAQAGAWNVISGVFFMTPEQALGTLRLEITHLTQGEAVCVDDVAVVRSTLEDFRPASDAAIDALRKRDVQLNIGQTGGVAEPVHIAQTRRAFPIGSVLNPGTMIDPVNGPQYKAFFSKYFNYCADEYAMVTAWETFINDKLPFDH--TVVNFCDTLDMPTRGHTIMGELSDTFNGGWD-VFTTPMDGT---MQAQLHERVLLWMGQYKDRVVDIEPLNEMLNSRLWPKILPCDGVGP-CICDYAPACPDDIFPVKEGVSVHAWAF-KLAASLAPADR--LVVNEYCVTGFCQPEQ--SNLSSFVKFVKNLNVETGGAVTGVADQGHYNLGANTAGPDTLLKL-ASIKEQLGADMDLWISEFDLDDPDPISKADGYEHALRAFFASPAVSGIVLWGFWQGAQWRKDAYLVNQ--------------------GERLFGINGLLTKQWMTT-VDAVVGTPYTV--------YYGAGGRCQAQFEVPVGAAPIAITPAGWKCTAGLP 525

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BLAST of jgi.p|Trimin1|64909 vs. uniprot
Match: I1GUC0_BRADI (GH10 domain-containing protein n=2 Tax=Brachypodium distachyon TaxID=15368 RepID=I1GUC0_BRADI)

HSP 1 Score: 114 bits (286), Expect = 6.240e-23
Identity = 135/525 (25.71%), Postives = 202/525 (38.48%), Query Frame = 3

Query:  396 VPGANFQPGEAYHLAAWVYLPQYDCTDEITSLKCPYLKYQADGIEDGAGTLLTRIP---NRWNAMSGT--VVSQGGDLTILIKQLPMGTTVYIDDVWLTNCSLDNFRAYSLPKIADLRKRDVALQIGPGIAGQAT---ITMTRHEYPFGATLASPDLDNVAGLADLFLQHFNAITDEYEQKWPQTEPQQGQFAWDGGDAIYDFAVQNDLGMRGHDIF--AEGGGPDWLANLPADGSANSVQAAIWQRLNDYIERYDKHVINYDVVNEITHFNKMITLLPCKPNGEGCMCQYKPACAGMALAINTPWWTWAWAATKHVLTLRGSGNKGLYQNDYCTASFCGA-PNG--------ISNMVRLQPIVGNTGYGNQLHQGLAKGTCGFDLHMRIDESTRATPGTDWWFTEFDINDPDVLLRADGYEMGYLAGFSHPKNMGITLWG------WAKETVAFDQDARPYTS--LLDSLDTLQFNPAGDRVLGDDGLLQSTFKSTYTQAIPATGGTMLMNLF---KGDYQVAL 1880
            +P    +P   Y +  W+ L Q         ++   L+ +  G +D A + +         W  ++GT  + ++    ++ +   P G  V + D+ +      +       K    RKRDV L++G G AG+A    +    + +PFG+ +    + N A   D F  HF+    E E KW  TEPQQGQ ++   DA+  F  ++   +RGH +F   E     W+ +L  D     +Q A+  RL   + RY     +YDV NE+ H       L     GEG      PA      A   P                      L+ NDY     CG  PN         IS + R    VG  G      QG      G  +   +D    A  G   WFTE D+++PDV LRA   E+     F+HP   G+ LWG      W ++    D D     +  +  +L           V GD       F  +Y   I +  G + +  F   KGD  + L
Sbjct:   59 IPDGALKPRVTYRVTGWISL-QGTAGSGAAEVRVS-LRVEGGGSDDEACSWVECAEVAAGGWTEINGTFRLKTEPRAASVYVHGAPAGVDVMVKDLRVFATDRQSRFRELQDKTDKARKRDVVLKLG-GAAGEAASIRVVQLDNAFPFGSCINGTVVQNGA-FVDFFSNHFSWAVFENELKWYHTEPQQGQVSYADADALLGFCERHGKRVRGHCVFWAVESNVQQWVKDLGRD----DLQPAVKARLEGLVSRYAGRFGHYDVNNEMLHGRFFRDRL-----GEGA-----PAIMFREAARIDP-------------------GAQLFVNDYNVE--CGDDPNATPDKYMELISELQRGGATVGGIGL-----QGHVTRPVGEVVSGALDRL--AATGIPIWFTELDVSEPDVGLRAADLEVMLREAFAHPAVHGVVLWGFMQGQMWRQDAYLVDADGTVNEAGQMFLNLQREWKTDVRGNVDGDGSFAFRGFHGSYVAQIVSEAGEVQLKAFTVEKGDTTLVL 537

[Close]

BLAST of jgi.p|Trimin1|64909 vs. uniprot
Match: A0A6P4YZG8_BRABE (uncharacterized protein LOC109471978 n=1 Tax=Branchiostoma belcheri TaxID=7741 RepID=A0A6P4YZG8_BRABE)

HSP 1 Score: 113 bits (283), Expect = 3.590e-22
Identity = 128/514 (24.90%), Postives = 208/514 (40.47%), Query Frame = 3

Query:  402 GANFQPGEAYHLAAWVYLPQYDCTDEITSLKCPYLKYQADGIEDGAGTLLTRIPNRWNAMSG-TVVSQG------GDLTILIKQL----PMGTTVYIDDVWLTN---CSLDNFRAYSLPKIADLRKRDVALQIGPGIAGQAT--ITMTRHEYPFGATLASPDLDNVAGLADLFLQHFNAITDEYEQKWPQTEPQQGQFAWDGGDAIYDFAVQNDLGMRGHDIF--AEGGGPDWLANLPADGSANSVQAAIWQRLNDYIERYDKHVINYDVVNEITHFNKMITLLPCKPNGEGCMCQYKPACAGMALAINTPWWTWAWAATKHVLTLRGSGNKGLYQNDYCTASFCGAPNGISNMVR--LQPIVGNTGYGNQLHQGLAKGTCGFDLHMRIDESTRATPGTDWWFTEFDINDPDVLLRADGYEMGYLAGFSHPKNMGITLWGWAKETVAFDQDARPYTSLLDSLDTLQFNPAG---DRVLGDDGLLQSTFKSTYTQAIPATGGTMLMNLFKGDYQV 1874
            G+  + G  Y    WV +     T      K   +      ++DG+ + L  + +  +A  G T +S G      GD    ++      P      IDDV   +    S  N+++ +  +I  LRKR V  ++    A   +  I  T+  + FG+ + +  + + +  AD F  +F     E   KW Q EPQ+GQ  W   D   +      + +RGH +F       PDWL       SA  V+   W+R++D + RY   + ++DV NE+ H               G   + K   + +   +        +   K     R    K L+ NDY   +   +    +N +   L+      G G Q H G         L+++   +T A+ G   W TE DI++ D  ++ADGYE G  A FSHP   G+ LWG+      +DQ      + + + D  Q N AG    R++ +D     T  S     + + G   +   F G+Y+V
Sbjct:  250 GSAIKSGYTYMFTMWVKILDGGSTPYNIKAKLNVV------LKDGSQSWLKIVSSTVSAQDGWTRLSAGYTVDAYGDTVSSVRLYAEGPPANVRFLIDDVSFLSFMDVSQSNWKSEANTRIDQLRKRYVNFRVNTPNAHDISVEIAQTKSHFAFGSAVNAWRMPSNSRYADFFFDNFEWAVLESNHKWKQNEPQEGQLQWARADRTMEMLESRGVTIRGHCVFWSVPDNVPDWLKGY----SAAEVEQKCWKRVDDVVGRYSGRLAHWDVNNEMLH---------------GSFFRDKTGSSQIRYEM--------FRKVKE----RDPSAK-LFLNDYNVVTGYWSTRDYANQITEFLKNGAPVEGVGAQGHFGSRPDP----LNVQYCLNTLASRGLPVWITELDIDEADEYVKADGYEDGLRAFFSHPAVEGVLLWGF------WDQSHWKPDAAIVNGDNFQINEAGRRWQRLVFNDW---RTNLSLTDGIVTSHGKEFIFRGFHGNYEV 712

[Close]

BLAST of jgi.p|Trimin1|64909 vs. uniprot
Match: A0A835Z8G3_9STRA (Glycoside hydrolase superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8G3_9STRA)

HSP 1 Score: 112 bits (279), Expect = 7.660e-22
Identity = 74/243 (30.45%), Postives = 112/243 (46.09%), Query Frame = 3

Query:  546 LLTRIPNRWNAMSGTVVSQGGDLTILIKQLPMGTTVYIDDVWLTNCSLDNFRAYSLPKIADLRKRDVALQIGPGIAGQATITMTRHEYPFGATLASP--DLDNVAGLADLFLQHFNAITDEYEQKWPQTEPQQGQF----------------------------AWDG----------------GDAIYDFAVQNDLGMRGHDIFAEGGGP--DWLANLPADGSANSVQAAIWQRLNDYIERY 1130
            ++T I N+WN +SGTV S GGD+ +++  +P  + ++ DD  + NC ++   A+S  KI ++R+R   + IG   A  A ITM +HE+PFG  +     D DN         +HFN I  E   KW   EP+ G                              A +G                G+   + A +  + +R H  + E      DW+ NLP DGS +S+Q AIW+R+  Y+ERY
Sbjct:    1 MVTAIANQWNLISGTVFSDGGDVELILGNMPADSDLWFDDFAVANCGME--AAHSDAKIDEVRRRTTRVNIGKSGAETAKITMLKHEFPFGGAMWDDCVDSDNCKAFVK---EHFNTIVAETGMKWWDEEPEDGDNTGTTXXXXXXXXXXXXXXXXXNQRPHHDACNGXXXXXXXXXXXXXXXXGEKYKEVARELGVELRAHSTYWEDNYKVQDWVKNLPRDGSRDSLQYAIWRRMQQYVERY 238

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|64909 vs. uniprot

BLAST of jgi.p|Trimin1|64909 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A835YTF7_9STRA	0.000e+0	100.00	Glycoside hydrolase superfamily n=1 Tax=Tribonema ...	[more]
A0A835YHL6_9STRA	2.070e-185	44.61	Glycoside hydrolase superfamily n=1 Tax=Tribonema ...	[more]
A0A836CG56_9STRA	2.060e-74	31.88	WSC domain-containing protein n=1 Tax=Tribonema mi...	[more]
A0A836CFE3_9STRA	3.680e-65	29.41	Glycoside hydrolase superfamily n=1 Tax=Tribonema ...	[more]
A0A836CIY0_9STRA	1.550e-57	30.06	Glycoside hydrolase superfamily n=1 Tax=Tribonema ...	[more]
A0A835ZB14_9STRA	1.000e-55	30.26	Glycoside hydrolase superfamily n=1 Tax=Tribonema ...	[more]
A0A836CK16_9STRA	6.170e-43	29.93	Glycoside hydrolase superfamily n=1 Tax=Tribonema ...	[more]
I1GUC0_BRADI	6.240e-23	25.71	GH10 domain-containing protein n=2 Tax=Brachypodiu...	[more]
A0A6P4YZG8_BRABE	3.590e-22	24.90	uncharacterized protein LOC109471978 n=1 Tax=Branc...	[more]
A0A835Z8G3_9STRA	7.660e-22	30.45	Glycoside hydrolase superfamily n=1 Tax=Tribonema ...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_40	contig	Contig_40:166217..181267 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|64909\|CE64908_165
Description	Glycosyl hydrolase family 10
COG category	G
Max annot lvl	35493\|Streptophyta
EggNOG OGs	COG3693@1\|root,2QSCW@2759\|Eukaryota,388Y8@33090\|Viridiplantae,3GXR9@35493\|Streptophyta,3KYHX@4447\|Liliopsida,3IKMS@38820\|Poales
Evalue	8.32e-24
Seed ortholog	15368.BRADI1G27257.1
Hectar predicted targeting category	signal peptide
TranscriptId	65231
Track	FilteredModels1
ProteinId	64909

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|64909	gene_8039	Tribonema minus UTEX_B_3156	gene	Contig_40 166217..181267 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|64909	Trimin1\|64909\|CE64908_165	Tribonema minus UTEX_B_3156	polypeptide	Contig_40 166406..181223 -

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_8039_14	exon_8039_14	Tribonema minus UTEX_B_3156	exon	Contig_40 166217..166567 -
exon_8039_13	exon_8039_13	Tribonema minus UTEX_B_3156	exon	Contig_40 167691..167762 -
exon_8039_12	exon_8039_12	Tribonema minus UTEX_B_3156	exon	Contig_40 168391..168624 -
exon_8039_11	exon_8039_11	Tribonema minus UTEX_B_3156	exon	Contig_40 169096..169339 -
exon_8039_10	exon_8039_10	Tribonema minus UTEX_B_3156	exon	Contig_40 170338..170512 -
exon_8039_9	exon_8039_9	Tribonema minus UTEX_B_3156	exon	Contig_40 171047..171113 -
exon_8039_8	exon_8039_8	Tribonema minus UTEX_B_3156	exon	Contig_40 171823..171942 -
exon_8039_7	exon_8039_7	Tribonema minus UTEX_B_3156	exon	Contig_40 172534..172578 -
exon_8039_6	exon_8039_6	Tribonema minus UTEX_B_3156	exon	Contig_40 173383..173627 -
exon_8039_5	exon_8039_5	Tribonema minus UTEX_B_3156	exon	Contig_40 174469..174662 -
exon_8039_4	exon_8039_4	Tribonema minus UTEX_B_3156	exon	Contig_40 178978..179141 -
exon_8039_3	exon_8039_3	Tribonema minus UTEX_B_3156	exon	Contig_40 179980..180075 -
exon_8039_2	exon_8039_2	Tribonema minus UTEX_B_3156	exon	Contig_40 180689..180916 -
exon_8039_1	exon_8039_1	Tribonema minus UTEX_B_3156	exon	Contig_40 181056..181267 -

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR3_8039	UTR3_8039	Tribonema minus UTEX_B_3156	three_prime_UTR	Contig_40 166217..166405 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_8039	CDS_8039	Tribonema minus UTEX_B_3156	CDS	Contig_40 181056..181223 -

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR5_8039	UTR5_8039	Tribonema minus UTEX_B_3156	five_prime_UTR	Contig_40 181224..181267 -

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_40:166217..181267-
coding sequence from alignment at Contig_40:166217..181267-

spliced messenger RNA

>mRNA_8039 ID=mRNA_8039|Name=jgi.p|Trimin1|64909|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2447bp|location=Sequence derived from alignment at Contig_40:166217..181267- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
AGCAAAGCCTAACGCAGGGACGGCAGCTCACGTTGCTTCCCGGCATGGCG
CTCAAGGCGGCGCTGCTGATATGCTCGCTTGGCAGCAGCGCGCACCTCAG
CTTCGCTGGCAGCCTGAGGGGTACAGTCAACACCGATGCGCGCCAACAGC
AACCTGGCAGGAAGCTGCCACCACAATCGCTACCTGTCCCCGCTTACGAG
AAGATCTTCCCGGGCTTGATGGTGGTGGAAAACTTCGAGAAGGGGGCAGA
GGGTTGGGTTGCTGAGTGCGCGGACGTCGCAGAATGGGTTCAGGTCGGCC
AACCGGGGGTCCCGCCTCCGCGCACGCCTGGGACCAAGGGCATGTATAGG
TTCACGGGCGCCAACCAGCCCCTGTGCTCGTCGCTTAACTTTGTAGTGCC
CGGCGCCAACTTTCAACCCGGGGAAGCCTACCATCTGGCGGCATGGGTGT
ACCTGCCCCAGTATGACTGCACAGATGAAATCACATCCCTCAAGTGCCCC
TACCTGAAGTACCAGGCAGATGGCATCGAAGACGGGGCGGGAACGCTGCT
AACAAGGATACCCAACCGCTGGAATGCAATGTCGGGGACCGTGGTCAGCC
AGGGGGGGGACTTGACTATTCTCATCAAGCAGCTGCCCATGGGCACCACG
GTGTACATTGACGATGTCTGGCTGACAAACTGCTCTCTGGATAACTTCAG
AGCCTATTCGCTGCCCAAGATAGCGGATCTGCGCAAGCGCGACGTCGCGC
TGCAGATAGGCCCCGGCATAGCGGGGCAGGCCACCATCACAATGACGCGG
CACGAGTACCCGTTTGGCGCGACGCTGGCTTCGCCGGACCTGGACAACGT
GGCGGGTCTGGCGGACCTCTTTCTGCAGCACTTCAACGCCATAACCGACG
AGTACGAGCAGAAGTGGCCGCAGACGGAGCCGCAGCAGGGGCAGTTTGCG
TGGGACGGCGGCGACGCTATCTACGACTTTGCCGTGCAGAACGACCTGGG
CATGCGCGGCCACGACATATTTGCAGAGGGAGGGGGGCCCGACTGGCTGG
CCAACCTGCCTGCGGATGGGAGCGCCAACTCTGTGCAGGCGGCCATCTGG
CAGCGGCTGAACGACTACATTGAGCGCTATGACAAGCATGTTATCAACTA
CGATGTGGTTAATGAGATTACGCACTTCAACAAGATGATAACCTTATTAC
CGTGTAAGCCAAACGGCGAAGGCTGTATGTGCCAGTACAAGCCCGCGTGT
GCTGGCATGGCGCTTGCCATCAACACGCCGTGGTGGACGTGGGCCTGGGC
TGCGACGAAGCATGTGCTGACGCTGCGAGGGAGCGGCAACAAGGGGCTCT
ACCAGAACGACTACTGCACAGCCAGCTTCTGTGGCGCACCAAACGGCATA
AGCAACATGGTGCGCCTTCAACCCATCGTCGGCAACACGGGGTACGGCAA
CCAGCTGCACCAGGGGCTTGCCAAGGGGACGTGCGGCTTCGACCTGCACA
TGCGCATTGACGAATCTACCAGAGCTACGCCAGGCACCGACTGGTGGTTC
ACTGAGTTTGACATCAACGACCCGGACGTCCTCCTCCGCGCCGACGGCTA
CGAAATGGGCTATCTCGCAGGCTTCTCCCACCCCAAGAACATGGGCATCA
CGCTGTGGGGGTGGGCTAAGGAGACCGTTGCCTTTGACCAGGATGCAAGG
CCCTACACGAGCCTCCTGGACAGCCTCGACACACTGCAGTTCAACCCTGC
GGGCGACCGCGTGCTGGGCGACGACGGACTCCTGCAGAGCACCTTCAAGA
GCACCTACACGCAGGCCATCCCCGCAACGGGCGGCACCATGCTCATGAAC
CTATTCAAGGGCGACTACCAGGTGGCACTGGGCGGCTGCACCGCCAACTT
CAAGGTGCTGAGTGACTTGCCCCTCCAGGCTGGAAACCTCAAGTGGACGT
GCCCCGCGGGTGCCCCAGCAGCGGCAACAGCGCGCGTCGCCAAGATCGTC
GAGCCCACCGTGCCGGTCAAGAAGGTGATGCCGGTGCCTCCGCCACGCCC
TGACTATGTACCTTATGTACCCCCCCCTCCCACGAGCGGCTCCCAGGGCA
CCAACTCGGGAGGCGACCCCTACGACCCCTACGCCGCCCCTGCGGACCCC
TATGCGCCCCCAGCGGACCCCTATGCGGCCCCAGCTGACCCCTATGCGCC
CCCGGCCGATCCCTATGCACCCCCAGCCGACCCATATGCGCCGCCGCCCC
CTCAGTAAGCGACTGCCCGCACGGGGCGTTGCGGAGCAGGCAGCGGGTGG
CACCTGCACGTGCCCTCGCAGAGGGAAAAGTCGCAACAGCGCTCAGTGCC
GCCAGCCGCGGCCCCAGCACAGCGGCCTCACGCTCTGATTCACTGGCTCA
ACAAGCGGTGTGCTGGGTCTTTTTTTCAACATTGGATTTTTTTTCAC

protein sequence of jgi.p|Trimin1|64909

>Trimin1|64909|CE64908_165 ID=Trimin1|64909|CE64908_165|Name=jgi.p|Trimin1|64909|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=738bp
MALKAALLICSLGSSAHLSFAGSLRGTVNTDARQQQPGRKLPPQSLPVPA
YEKIFPGLMVVENFEKGAEGWVAECADVAEWVQVGQPGVPPPRTPGTKGM
YRFTGANQPLCSSLNFVVPGANFQPGEAYHLAAWVYLPQYDCTDEITSLK
CPYLKYQADGIEDGAGTLLTRIPNRWNAMSGTVVSQGGDLTILIKQLPMG
TTVYIDDVWLTNCSLDNFRAYSLPKIADLRKRDVALQIGPGIAGQATITM
TRHEYPFGATLASPDLDNVAGLADLFLQHFNAITDEYEQKWPQTEPQQGQ
FAWDGGDAIYDFAVQNDLGMRGHDIFAEGGGPDWLANLPADGSANSVQAA
IWQRLNDYIERYDKHVINYDVVNEITHFNKMITLLPCKPNGEGCMCQYKP
ACAGMALAINTPWWTWAWAATKHVLTLRGSGNKGLYQNDYCTASFCGAPN
GISNMVRLQPIVGNTGYGNQLHQGLAKGTCGFDLHMRIDESTRATPGTDW
WFTEFDINDPDVLLRADGYEMGYLAGFSHPKNMGITLWGWAKETVAFDQD
ARPYTSLLDSLDTLQFNPAGDRVLGDDGLLQSTFKSTYTQAIPATGGTML
MNLFKGDYQVALGGCTANFKVLSDLPLQAGNLKWTCPAGAPAAATARVAK
IVEPTVPVKKVMPVPPPRPDYVPYVPPPPTSGSQGTNSGGDPYDPYAAPA
DPYAPPADPYAAPADPYAPPADPYAPPADPYAPPPPQ*

mRNA from alignment at Contig_40:166217..181267-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_8039 ID=mRNA_8039|Name=jgi.p|Trimin1|64909|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=15051bp|location=Sequence derived from alignment at Contig_40:166217..181267- (Tribonema minus UTEX_B_3156 )
AGCAAAGCCTAACGCAGGGACGGCAGCTCACGTTGCTTCCCGGCATGGCG
CTCAAGGCGGCGCTGCTGATATGCTCGCTTGGCAGCAGCGCGCACCTCAG
CTTCGCTGGCAGCCTGAGGGGTACAGTCAACACCGATGCGCGCCAACAGC
AACCTGGCAGGAAGCTGCCACCACAATCGCTACCTGTCCCCGCTTACGAG
AAGATCTTCCCGGTATGTACTACGATCCTAACGTGCCACTAAATGCTGCC
GCTAGGCTGTCCTGCTTGCGGCAGGAAATCTAGCGTTGCTGCTCATGGCG
CTTTGCCTGACCGCACGTATTTCTTGCTGTTTGGATGCCGTTCGCAAGCA
GGGCTTGATGGTGGTGGAAAACTTCGAGAAGGGGGCAGAGGGTTGGGTTG
CTGAGTGCGCGGACGTCGCAGAATGGGTTCAGGTCGGCCAACCGGGGGTC
CCGCCTCCGCGCACGCCTGGGACCAAGGGCATGTATAGGTTCACGGGCGC
CAACCAGCCCCTGTGCTCGTCGCTTAACTTTGTAGTGCCCGGCGCCAACT
TTCAACCCGGGGAAGCCTACCATCTGGCGGTAAGATGTCTTCTAGAACTC
TGACCCCAACGGCTGATGCACACCTGTTCATATCCCACCACACAAGTACA
GTAGTAAGAGGGGAATTGATGCGTTCCACCACGTGCTGGCTGTGCTGTGC
ATGTGCTGACTACCGCTAACAGCATGACAGCAGTTTTCTGACCATCAAAG
TGCTGGTGCACGCTTTGATGTTGGACAACTGCCTGTTGTGAGCGATTATG
CGTGTACAAGTCCATGGTTGCATTGTGAGCAAGTCTCGAGCGTTGCGTAA
TGTACAGTACTTGCTGTTCCTGGCACCGCAGCTGCTGCCGTGCCAACCAC
TTTGCTGCCCCTGATTCACAGAGTTTGCTGTCACGTCAAGCTTGCAGCGC
AGAGCACCATTTTTGCCTGCACTCTTGTGAAGTGATGGCGCATGCTGCGG
TGGACACATTGATCACGCATTGCACACTCTTCAATGGAATCGAATCAAAA
TATCGTAGAGCTCTAGGTGACAAGGAGTGCTTAGCCGCAAGTGCCTTCCA
CCAACAACCGTGTGTCGCTGCTGCTGCAGTCATACGCCATGAGTCCAATG
TTTGTTATTAAAAGTTCCCTGGCTGCCCTGTGTGCTTTGCAGGCATGGGT
GTACCTGCCCCAGTATGACTGCACAGATGAAATCACATCCCTCAAGTGCC
CCTACCTGAAGTACCAGGCAGATGGCATCGAAGACGGGGTGAGAAAGAAA
ACAGCAGATGAAAACAAATTAGAAGGGGCGCTCTAGTGCATTATCAAGAG
CTGTTGTGCCTTTGAGGAAGTTGCACTTGTGTGCTGACCGTTTTGCTGGC
TCAACACCCCCAGTCATGTAAACGCAAGTTGTTGAAGTTGTCACGCAGTG
GCCATGGCATCAGATGTGCAGCGTCACCTTTTGAACCTGCTGGCTCAGGC
ATGCTTCAACAGAGACGACAAGTTCTTCCTCCATGCAGCATCTTGCACTT
GCCCGGGCCTTTTTCTCACCATCGCGCGGTAAGTGCTAGCAGTGAAGCGC
GCCATTGCAATCAGTGTTAAAAGTATTTTTGAATGCCTACACGTTGGTTT
TGCTGACAGAGTTTTGTGCTTGAAAAGCACAACAGCACTAAGAGCCGCGC
GCTGTCAACAGAACCCTCTGCTGTATGGGTGTTTGCGGGTTTGTGGCTCA
CGTGACGACATCACATCAGCACTTATCAAACATCTCATCTCACTGAGTTG
GGTCCATTGACAGTCCAGATCCAAGTTGCAATGCATCTGATCCTGCTGCT
GCAGTGGAACGTGCTTACCTCCTCAATGCTCACGCACCTTCTCCACGGAC
GTTCTATGCAGGAGCGCCTGTGTTGAAGTACTGTACACACATGAGCGTCC
CACTGTCGAACTACAGTGCTCTATGCAACGCTCTTGCTGTCAAACGCGCA
TGCTCTCTTGCATTCGCAGGGTCTGACGCAACGCTCTTGCTGTCAAACGC
GCATGCTCTCTTGCATTCGCAGGCTCTGACGTAACACTCTTGCTGTTGAA
CTTGCATTCTCTTTTCAAAACTGCAGGCGGGAACGCTGCTAACAAGGATA
CCCAACCGCTGGAATGCAATGTCGGGGACCGTGGTCAGCCAGGGGGGGGA
CTTGACTATTCTCATCAAGCAGCTGCCCATGGGCACCACGGTGTACATTG
ACGATGTCTGGCTGACAAACTGCTCTCTGGATAACTTCAGGTATGCACCC
AAAAAACCTATGTACCTAAGAGTGACCATCGTGTCTGCTGCCTCGGTGTA
TGGCAGCTCGGCAGAGTTTTATAGTTCAACAAGAAATATCTTATACATAC
TTTGATGAAGCGATGCAACGCTTTTTAAACAGTTATTTACCCTTTGAAAA
AAGCGGATCGCTGAGCATCAAGCGATACCTTACGCCCTGTCGTACTGCAG
AGCAGCCTAGATAGATCTGCAAATCGTGTTTTGTAGTTTTCTATATGCAT
ATGTGGTGCTTCTGCATACGCATGACACAGTGTGAAAGCCTAATCCTGAC
CTAACCGCAACGCTTAACCTTAGTGGGCACTGCAAGGCGGTGTAGCTCAT
CATTCCCTGAGTCGATGCACGCGCTTACCGCAAGCACTTATTGAGGCCTC
AGCATAAGGAGCGCATAGGGGGAGGCAGGGGGGCAGGACGCTCCCTAGTA
TTGCGACTTCAGTCTCACACAAGTATAGCACGCATGAGGGCTGGTGATTT
CTCATGTTAGTAATGTACAATAGAGAGGCGATAGTTAATGCAGGCGATAG
TTTATGTACAACAGAGAGGCATTCATTGTTGCAGAAGCAATTGCAGCAGC
TTCATGCTCTGCACTGCTGGAGATGTCGTCGGCACCTCCCTGCTCGCACA
TGGAGGTTGTTCAATGCTGGCTTTGGGTTTTGGATAAAAGTTAGTGCATG
CAGTGAATAGATTGTTGCAACTTTACAGAAGCACTGTTGTATTGTCACAT
TGCACTTGAAATACAAAGTGCATGGGTGACTTGTTACTCTGGGAAGCCTG
GTAGGCTGTTACACTGTTACACATGTGACTTGATACTCTGGGAAGCCTGG
TAGGCTGTTACACATGTGAAAGTGTTGATGGACAGCTACAATTATAAAAG
CTGCTTTTCAAGATCTCAGCACATTCATATGTTTGCAGTCTGAAACGCCT
GCCAAAGTATACAGGATCTTCGGCAGACATTGAGCTTGTGAAAGTCTGCA
ACAACTTGAAGGAAGACAGGATACTGATGACATTGCTTCTCTGTTGATTC
ACGATCAACCCCACGGCAGTTTGCACTGCACACCACACATCAGGGCCAAC
CCTAACCCTACCCCTACCAGCGTACAAATCATTGATGAAAACAAATCAAA
ATATCGTAGAGCACTAGGTGACAAGGTGTGGTTAGTCGTCAAATTGAATG
CCTTCCAGCAATGCCCGTGGTCGCCGCTGCTGCAGCACTTGGCCACGAGT
CACAAGCAGTGATGCTGCGGAAAGTGCAAGGTGCCGCTGTCGTCACCTCG
CGCCATTCTTCATGTGTGGTCAGGTGGCAGTGCTCAGCTGTTAAATCAGC
TATTTGGGGAGGTCACGATACGACTGCGGGTCCGCCCCGCCAGCCTCGCC
GCTCTTATACCGTGACCGCTTACATATCGTCCTTGGGGCTTAAGTAAAGT
TAGGGCTAACCCAAGGCAATCCTAACCCTAGATCCAGGTCTTGGTGTATT
TAATTAGGGCTAGTGTAACCATGGTTGGACTTGGCTTAGAATTATTCCGT
AAAGCAACCATCGCAGCACGCAGCCGCGGCACCGCTTGCAATTTTGCTGT
GATACGCTTCAGCGTTTTGAGTTTTGCGCAAAAGCTGCTGACCATTGATC
ATGCAGCGGCGAGCGGTAGGTGGGCACGATGTAAGAGCAGTCTGCTCCGC
ACCAAATCGCAGCACCAAATCGCTCTTATGTCGACCAGATCCGTGTTCAG
CCAGCCGACTGAGCGCTCTTACACTGTGACCGCTCTCATATCGAGCGCTC
TTATATCGCAGCCATCACCGTACATCAGCAGCATGTACCATGCCGCGCAT
ACTCTATGCAGCTTCAAGAAACGCCTGCAACAAGTACCGTCGCGGGAGTT
GACGCCAGTTGGTTGACCAGTTGGTTGACACGCCACTTTGAAGTCGCGTG
TGTGATTTTTCTGTCTTAGCATATATGTAGGTTGTTTCCATTGCTCTCTG
AGTATGCGCGCGCTGTGCCCGAGTGTTAGGGTTAGGGTTAGGGTTGGGGT
TAGGGTTAGGCTAGTCCTAACGCCAACCCTAACCCTAACTAGGCTAACCC
CAACCCTAACCCTCACCCAACCCCTTAGGGTTTCAACCCTAACGCAACCC
CTTAGGGTTTAGGGTTAGAGTTAGGCTAACACTAACCCCAACCCCAAACC
TACCCCAAACAACGGTGCAGCATTGCTGGCTGTATGTAGTGAGAGCATTC
ACATGCTTGTGTGTAGGAAAGGAAGTAACCATCCGGCGTACTTTGTCAGT
CAAGCTTAAGAAAAGGAGCTTTGACTGGGGGAGGACACAATATGGCTCTG
TTGCACAATTAGGGTTACATGCCCTAGTTGAGGTTTGCACTTAAAGTTGC
AGTTGAAGCACAGTTTGTTCGCGCAAGCTGTTTGAGATCAGCTCCAGGTC
ATTGATGTAGGTGACTCAGCAATCCTGAGCTGGCATGCGCAGGTATGCTG
TCGATAGTAATCTCGCGTCCTTCACCACCTTACTTTCTGATAACACCACG
AGTGTGTCACCTAGGTCACACCGAACCAATAATGCAATGACTCCTCGGCA
TTGCTGCTATCCTATTGCGCCTTGCAATGGCACACTGAAGTCGTAAGAAT
TGAAGCTGTATGCACTGCTGGGTATCTGCCCTTCTTGTGTAAGACCTGCA
ACAACTACTCGGCATTGCTGCTGCCGCCCAGCCTATTGCACCCTGCAATG
GCACACTGAAATCGTAAGAGCCTGCTACGCTATCCACTGCGCACACTTGC
CCCTGAAAATTGCAACAGCTCAAGATAGGCCCTCCAGCCAAGGGAATCTT
CTCCACCTGCACCTCATGCAGTAGCTCCGGCCGCTCCAGTTTGCAGGCTG
CTGTTCAGCTGCTGCTCGGGGTTAGGGTTAGGGTTAGGGGTTAGGGGTAG
GCCTAACCCTTACCCTAACCCTAAACAATGACATGTATCGATGCTGCCTC
GTCGCAACCTTCCTTGAAGGAGTGCAGGCTTGCGCCTGTCGGCTCACATG
TTCAGACGAATTTGTCGTCTCCCTGGATCGCTGTGCAGACCTTTGCTGGT
GTTGAGCATGAGAGCGGTACCCGCTGCGGCACACGGTCGAGTTGCTCAGT
CTCTCACAACCTGCTCGACCCGCACCTGGCAACTCCTGATCGTCCCACGC
AAGTTACCAGTGAGTCTACAGCAAATGGGCTTCACAACAGAGGCCAGACG
CATCGTTCTAGCGCCCTCTGGCGCTCCAACCATGGCGGCGCTTTGGTCCG
CGCCGACTCACATGCTGATGTCTCAGAATTATCGGGTCGGCTGCGGCTAT
CACGGCGGCCACAACAATGAAGGGTCGTGCGGCAACTTGCACCCCCGCAT
GGTGTGTGAGAACACGGAGTGGCGTCTTCTGTCCCCCCCCCCCCCCCCCG
GTCGACTCCGGAATGAGCTCTGCATAAGTTTGCACATACCCTGTTGACTC
TGCAGAGCTCATTTGAGAGTCGACCTGAGGAGGGCACAGCAAACGTCACT
CTGTGTTCCCACACGCATGGGCGCATGTGCCGCACGACCTTAGGTTGTTG
TTGCCTCCGTGATGGTTGCAGCCGACCTGATGGATCCGATACATCAGCAT
GCGTGTCGACGCTCACCGAAGCGCCGCCACCTGTCGAGCGTCAGAGGGCA
CCATAGGGATGCGCCTGGCTTCCCGCGTGCAGTCCATCTGCGAACACACG
CTGCACTCCAACTACAACGCTAGGTGCAAACCTCAACTAGGGCATGTAAA
CCTATTTCTTGCAACAGAGCCATAATGTAACACGAGACTGCGGAGTGCCG
TAAGCGCGGCGCAGCGCTCGAAACAGGCACATGACGACACAATGTCACAA
ATGAAGTTGGCCGCTCACTTGATCTCTGCTGCTCTCTCACCGTCGGATCA
AAAAACACCATCTCGCATGTTGAGACCAAAGCATTGCCGCACATACATAC
CCCTAAACACATACCCCTCACACCGCAACACACAGCAAGTTGGCTGCTCA
CTTGATCTCTGCTGCTTTTTCACCCGTCGGATCAAAACGCCATCTCATAT
GTGGAGACCACAGCATTGCCGCAGACACATGCCCCTGAATACAGACCCCA
CACACCGCAACACAGAGCAAGTTGGCTGCTCACTTGATCTCTGCTGCTTT
CCCACCGTGTCAGATCAAAACACTATCTCATTTGTGACCTCATTTGTAGA
TATACCAGTGCCGCTGACCAGTCACACCGCAATATCACTCTTCTCTGGCT
TGCAGAGCCTATTCGCTGCCCAAGATAGCGGATCTGCGCAAGCGCGACGT
CGCGCTGCAGATAGGCCCCGGCATAGCGGGGCAGGCCACCATCACAATGA
CGCGGCACGAGTACCCGTTTGGCGCGACGCTGGCTTCGCCGGACCTGGAC
AACGTGGCGGGTCTGGCGGACCTCTTTCTGCAGCACTTCAACGCCATAAG
TGAGTGATGGGAGGGGTTAGGCAAACTGTTTTGAATTCTTCAATATTCTT
AAGAATTCTTCAACACTTTCACATATGCTAGAGCAAATGCTACCCCCCTT
GGTAATGTAAGCCTGGACAATGTGGCGGGGCTGGCGGACCTCTTTCTGCA
GCACTTCAACGCCATAAGTGAGTGACAGGGGTATAGGCAAACTGTTTCAC
ATACTTCTTCTTTACCAGTTTTTACGTTCTGCATGCGCGGTGCGGCGGAG
AGGCTTCCACCTGCAGCTGTTGAATGAATGAGCGTAAGCGCAACAGGTGC
CAAGGGCGGCAGCGGTCCAGGCAAATTTCTGAACCATGCTGCAACTTGAG
TGATGGACAACTACACGTCTCGAATAGGTGATCACCGCCATTTTATTTTG
GACTTGAAGTTGAAGTTAGCTGCGGCTAGTGTGCCAGTAGTAGTAATGCT
GGCAGCAGCAGGCGCGGCATTCGAGTCATGCTGCCAGCATGCTGCCAGCA
CTACCATGCAGACTGCATCACCAAATCACAGTATGTATACTTCTATGATA
TACTCTGCTTACAGCAACAGAAGCGGCAGGCGCTCCGGGTCACCAACACC
CACCAAGAACCAGCACCCGGCTGCTGTCGCCGTACTCCGTTAATCAGAGC
CTGGAATTGCAAGTTCAACTCCGTCATTAACTTCAACTCTCTGTGCTGGC
ACCCCATCCCCCCCCCATGCAAGCGCAGCGGACGAGTATGAGCAGAAGTG
GCGAGTTCAACTCCGCCTCTCAACTTCAACCCCATTGTTGACTTCAACTC
GCCGTACTCACCCCCCCACTGCACCCCCCCCGACGCGCAGCCGACGAGTA
CGAGCAGAAGTGGCCGCAGACGGAGCCGCAGCAGGGGCAGTTTGCGTGGG
ACGGCGGCGACGCTATCTACGACTTTGCCGTGCAGAACGACCTGGGCATG
CGCGGCCACGACATATTTGCAGAGGGAGGGGGGCCCGACTGGCTGGCCAA
CCTGCCTGCGGATGGGAGCGCCAACTCTGTGCAGGCGGCCATCTGGCAGC
GGCTGAACGACTACATTGAGCGCTATGACAAGCATGTGAGTGGAGTGAAG
TAGAGTGGAGCAGGTGACGCTACATGTGTGTTTCAACTGCAATATTGAGC
AGCAAGAAAGCTGTGCAGGCGGCCATCTGGCAGCGGCTGAACGACTACAT
TGAGCGCTACAACAAGCATGTGAGTGAAGTGAAGTAGAGTGGAGCAGGTG
AAGCTCCATGTGTGTTCCAACTGCAATAATGAGTAGCAAGAAGTCGGTGC
AGGCGGCCATCTGGCAGCGCACAACAATTTTCATCGAGCGCTATGAGGTG
AGCATGCGAGTGGAGTAGGGTTTTCCACAGTTTTCGGGTGGTCTGTATAT
TCTACAGACAGTCCCTTGGCAGTCCATTTGCGGGCTGGGTCAGGCAGCCA
GCTGACATCAGCTTGCCTAAATGGTCTCTCACCGAGCACTGTGAGTAGCA
GCGCAGAGAACGTGAGAATGTGCTAGCGGTACTGTCTGTGCTAGGGGTCC
GGTAGGATAGCAGCAAGTCTTGCCAGGTCCTGACCGTTGCACAGTTAGAT
GGCCTGTTGTGGAACATCATAGAGCAAGGACGCCAGCCTTTGTTTTGCTG
TTGCCGCTGGCTCTGACCTCGGAACACTTCAATCCACGCGTTCAGCCTGA
AGGTCTCGCTCGGTAACATCACGTGCAGGATATGCTCGGTAGAGCGCATG
CACCAGGCATCGCGACTGTGCTCTATGATCAGGTCGTAGCAGCATGGCGC
CTGAAGTGCACTGCTGATGAGCACTGATGCCCGACTGCACGCATCGATGC
TCACCTGCCTTTCTCTTGTCCTGCCTTGCTCTCTTGCAGGTTATCAACTA
CGATGTGGTTAATGAGATTACGCACTTCAACAAGGTGACGCGCCACAACA
ATTACTCTGTGCAGCTGCCATCTGCCATGTTTAGCGCCTCTGCACACCTC
ACATCGTTGGCCACTTCTCAAGTAGTGACTCGCCTGTGTCTGATGTCCTC
AACTGAGTGTGGTAGGGGATGATGACTGAGGTCGTCCATGGCATCGTGCT
TTCCACAACGAATCAGACATTTATAAATCTAAAGGCACTTGGCGATGATC
GTCAATACGGAATCAGTGTGCCAGATCATTGCTTTCTGTACTGAAGCCAA
TGTTAGCTCACACACACCACAATTGAGTACGCACAAACATGCCAGCCCGC
AGTATGCTGGATCAACCAGCTAGCAATGTTGCAGACCCTGTACCAAAATG
TTGCTGTGCAGAGTTGTGCAGCGCATGTAGTCGGCTGACTGTGTCGGTTT
GTTCACAGGCAACAGAACCAGCTCATTGCTTTTCTCATGCATTTGGACAC
GCACACATATATTATACCATCAAGGCCTATGCACACCCTGCCCAAAGCTT
CATGTTGAGCATCGAGCAGACTCAGGCATCACCTCTGACTGCCCCCATAC
CTCTGCCATGCTCCCACCGCCGCAGATGATAACCTTATTACCGTGTAAGC
CAAACGGCGAAGGCTGTATGTGCCAGTACAAGCCCGCGTGTGCTGGCATG
GCGCTTGCCATCAACACGCCGTGGTGGACGTGGGCCTGGGCTGCGGTGAG
CACTGCTGCTCGGCCTAACCCTCACCCTAGACAACTGTGTGTTGGCTTAA
CATGCAGCATGCATGAGCCATGGGTCCCACAGCATGGAACATGAAAAAGC
CAGGCCTGGGCTGTGGTGGGCACTGCTGCTCAGCGTAACCCTAACCCTAG
ACAACTACATGTGCCGCTAGCTATAGCTGTTGGTTAAAACATGCAGCATG
CATCAGCCATGCGCCCACAAGCATTGAACATGAATAATCAAGGTGGGCGT
GGGCCTGGGCTGCGGTGAGCACTGCTGCTCAGCCAACCCCTAACCCTAGA
CAACTACGTTTGCAGCTAGCTGTAGCCATCGCCCCTGATGCACACCGCTT
GCAGGAGTCGTGAATTCACAAGCATTTCAATGAACGTGAATAGCCGGGCC
TGATGTGCCAGTCTGCATCATGACGCCGCCAGCGATTGCCTCGTGCCGCA
AGCGACTGTGTCACTAGCTCTTGCTCCGCCGCGTTGACACCTGCCTGGCT
AGAGTGCTTGCCAACGGCACTCCTCTGCGATGTGTATCTCAGATCCCCGT
TCATTCAGTATACTTCAGAGTACCATGTTTGTGATCCACCCAGTGATCTC
AATTTGGGACTGGGACGTCATAACAATGCCTTGTCTTGATAAACAAGATT
CTGCCTGCGTACTCATCCTGATGCTACCCTCATTGTGCGTGCACTGTCAC
GCAGACGAAGCATGTGCTGACGCTGCGAGGGAGCGGCAACAAGGGGCTCT
ACCAGAACGACTACTGCACAGGTAATCAGAAGTCCAAGGTTGAGAACTTG
TAGCAGACATATGTGCAGCGAACAACTTCAGCTTGACCGTGCATCAAGTC
CCGGTCAGTCGCAAGAACAGCGCACGCAGCTCATTGCTCTGTTCACAAAC
TGTACATGTAAGCACTGCCGCATCCCCCCTTGTGTCCAAAATGTTGCGCA
AGCGTTATCGTTTCACCTCATACCTGGATTTTGCTGCGGTTGGCCTCGGT
GACGCTCCAAGATGCGCACCATCTCAGTGCGTGCAAGTCTGCTAACTGAA
GAGCAGTCATCTCCGCGTGGAGCTTAACCTCGTGCTCATGTGTACGCTAA
CTTATCTTCATCCGAGCAGCTAGCGTCTGTGGCGCACCAAACGTCACACT
GACATGGAATTCATGTGCCCAAGGACTGGAATCATTCTCACATGAGCTTG
TTCAACATTCATCATGATAAACATCACCAAATGACATAGATGGTAGTTTT
GAGATGGTGTCCCAACATCTGCTCACGTGTACCTGACTTGTCTCCATACG
AGCAGCCAGCTTCTGTGGCGCACCAAACGGCATAAGCAACATGGTGCGCC
TTCAACCCATCGTCGGCAACACGGGGTACGGCAACCAGCTGCACCAGGGG
CTTGCCAAGGGGACGTGCGGCTTCGACCTGCACATGCGCATTGACGAATC
TACCAGAGCTACGCCAGGCACCGACTGGTGGTGAGTCAACGTGTCTTGCA
TGTGTATATGTTGCAAAGTGTCAGTGCATATCACGATACACAAACAATTC
TGTAAAAAATGGCTGCCGTCATATCTTGGTACTGCTGTCGTTGCTGTCGT
AGCCAGATCACTACATACTGCACATGTGCATTGACATGTCCACCAGAGCC
ACGCCAGGCACCGACTGGTGGTGAGTCACCGTATGTATTGCATCAGTCTG
TATGGCAAGTCAGTGCACATCTTCGTGTGCGAACAAGGCCTCCACATGCG
CATTGATGGACTTACCAGACCCACGCCAGGCACCAACTGGTCAACATGTT
TTGCATCTGTTCTGTATATATTGCATGCGTCAGTGCACATCGCCATGCGG
ACAAGGGCAGCCATTGTACCGTCATACTGCTGTTGGTAGCCAGATCACCG
TGTACTACACGATACACAGTGACAACCACATGTTTAACTGGCTTGTGGAA
CAGTATGCTGTGCTCAATTGTCGACCACCGAGAGCTGCCAGATTGGGCTG
GGTTTGGCCCTGGCGCCACCGCATCTGATGTGAGCTGCAACCCTAGGGTT
AGGGTTATGGTTACTAACCCTAACCTAACCCTGCAACACCTTTCTTTGCT
GCTGCACGCCAAATGACCGCTAGGCCCAAACTTCACCATAGCTTCACATT
CCCCTGCATACGGCAGCACTCCCATAGCAACTGCCTGGAGTAAGACCATC
ATCAGTTAAAGTCCGCTGTCGATCGCTACTGCAGCTGTGGCACCGACAGC
TGCTGCTGTCTGCATTCCTCCTCTCCTGAAAGTGAAGTGACTGGAGGATG
AATCCAAGCAGCTCGAGCCTTTCGTTTCACGGATATGTGGTCAGGCTCTC
AACACCTCATCCATCTCATTGGGTGCTGGATGATTGATGTCCACCGTTCA
CTGGCCCAGTATGTACAGGCTACGCACGCATGTCACTAACCACTACCTGC
CCCCCCCCCCCCCCCCCCCCCCCCCCAGGTTCACTGAGTTTGACATCAAC
GACCCGGACGTCCTCCTCCGCGCCGACGGCTACGAAATGGGCTATCTCGC
AGGCTTCTCCCACCCCAAGAACATGGGCATCACGCTGTGGGGGTGGGCTA
AGGAGACCGTTGCCTTTGACCAGGATGCAAGGCCCTACACGAGCCTCCTG
GACAGCCTCGACACACTGCAGTTCAACCCTGCGGGCGACCGCGTGCTGGG
CGACGACGGACTCCTGCAGAGCGTGAGTCGTCGAGTGCATCTGAGTTGAC
ATAATTGCCTTTTTCCAAAGATGTAAATGATAGCCCTCTAGTCTAATCTT
TGCTGTAGTTCAACCCTGCGGGCAACCGCGGACTCCTGCAGAGCGTGAGT
CGTCGAGTATATCTGAGTCGTCGTGATCACCTTGTGTTGAATGCACACGA
TAGCCCCCTACTTTTAAACCTGCAGCGCGTAAGTTGATCATAAACTCGAG
AGCTGAGCGACGACGGACTCCTGCAGAGCGTGAGTTGCCGAATACATTTG
AGGCGACAATCACCTTTCAGACGCAGTTCAGTATGCCAATGCTCTGGCCG
CACTGCCCCAGCTTCCATGTGCCACAAGATGAGAACACCAGCCACCGCAG
GGGCAACCTCAACACAGTCAAACGCCCCTACCCCCTCCCCCCCCCTTCAT
CTTCCCTTGTCTATGTCCGCTGTCGCCCCCCTCGCTACTCCAGACCTTCA
AGAGCACCTACACGCAGGCCATCCCCGCAACGGGCGGCACCATGCTCATG
AACCTATTCAAGGGCGACTACCAGGTGGCACTGGGCGGCTGCACCGCCAA
CTTCAAGGTGCTGAGTGACTTGCCCCTCCAGGCTGGAAACCTCAAGTGGA
CGTGCCCCGCGGGTGCCCCAGCAGCGGCAACAGCGCGCGTCGCCAAGATC
GTCGAGCCCACCGTGCCGGTCAAGAAGGTGAGCGCCGCAGCTTCGCTGTT
GAGCGCTGCTGCTTATGGAGCGCTGTCACTGCTGCTGTAACGCTGCTGCT
GCTGAGAGCGCTGTCACTGCTGCTGTAACGCTGCTGCTGCTGAGAGCGCT
GCTGCTGCTGAGTGCTGCTGCTGCTGCTGCTGCTATGAATGCTGCTGCTG
CGTGATTGCTACTGCTGCTGCTGTGAGCGCTGCTGCTTTGTTGCTGAGCA
CTGCTGCTGCTGTTGCTGTGATCGCTGCTGCCTACACTGTCATGGTTGAA
TTGCATGGTTGCGAAATGGAAGCCAAAACGATGCGCACATGCCACACATG
AAGCGCTCAGCAAACCCAACATCATATATCCGTTGAAGTGCAATCACTTG
ATCCAGAGTGAGCATCAGAGACGCGGTGGAGCGACACACGCTGCAGCGCC
ACACTGCCACGGCGCGCACCAGCGCGGCAACTGTGTTCACCTTCATCAAG
CAGCAGCGCAGCTGCCAGTGGCTCATGCCGCAATGAACACCATGTTGCAA
GCAGAGCTCGCGCCTGCCTCTGCTGTCACGTAGGCCCGCAGCTTATCCAA
CAATAATGGGAACATTGCCCTGCCGCTGCTGCTTGCGCTGCTGCTTGATA
CACAGGTGATGCCGGTGCCTCCGCCACGCCCTGACTATGTACCTTATGTA
CCCCCCCCTCCCACGAGCGGCTCCCAGGTGAGCTTGGTGGTTGCAGTGCG
TCACTAGCCCTAACCCTACCTCTAAGCTATGAAGAAGGAGCGCCCGGATC
CTGTCTCATTTGCTAAATATATAAAATGCACCAAAGTTGTACAATCGCAG
ACTTTTCCAGGGTCACCAACGGAATTGGCCATGCTTAGGCCAGAACGGAA
CCCCTGTAAGCCACCGCCAGGCTCCGACAAAGCCAAGACAGCTGCTATGC
AGTTATCGCTGCTGATTGCTGCTCGTGATCAGCGTTTCTGAGGCTCCAAC
TTTGCTGCTAGCAGCAGCCGGGAAGCATCGCGGATCGGCGGCGGCAGCAG
CAAGCATCAGCAGTGGCAGCACAATGTCAAACGGGAAAGTCAAGGCCAGG
CGACGCGACCCCAGCTCTCCTGCCGGTGATGACAGCGATTGCGGTGCCTG
GCCTTGCCTTTCCCATTTGACATTGAGCTGGCACTGCTGATTACTGCTGC
TGGCGCCGCCGATCCGCAGTGCTACCGCTGCATCCGTGCGGCGAAGCGAC
TGCAGCGTGAAAACGCGGGGGGGGGTGAACGTACCTTACTGCGGCACAAG
AAAGGAGGGGTGACCTCTAATTATGTTGCTGTGATCAAAACTAAAAACAA
GACGTCCAGTAGAGTTAGTTATCGATAAGTCGGTAATGCCGTATAAGTGT
ACTGATGCCAGAGTGAGCCATAGTCTTGCAATGGCTGCTGCACTTGATTA
CCGTGGTCGTCGGCACGAACAAAGACAACCATCGCAGCAGTTTCAGCCTC
CGACAGACAACTGCGCCCTTTGCATGAACAACGTCATTATCCCTCTCGCA
CTTCAGTACTTGACGATGTTCACAATGCAACCATCTTTATTCAAAAGCTC
AATGGGGTGCACCTGGCCTCGTACCAGACAGCTCTTGCACGACTAGTATA
CTTCTGACATTCCCCCATCTCTGAGCACCATGAACCGTCAACGCTGCTGC
GGCTGGCCATACCGCGTACCATACAGCTCTCGCGCGCCTCGTACACTTCT
GACGTTGCCCCATCTCTGAGCACCATGAACCGTCAACGCTGCTGCCACTG
TCTCGTCTCTCACGACCCTCGTGCTATCCATCCCACCACCGCTCCCTCAG
GGCACCAACTCGGGAGGCGACCCCTACGACCCCTACGCCGCCCCTGCGGA
CCCCTATGCGCCCCCAGCGGACCCCTATGCGGCCCCAGCTGACCCCTATG
CGCCCCCGGCCGATCCCTATGCACCCCCAGCCGACCCATATGCGCCGCCG
CCCCCTCAGTAAGCGACTGCCCGCACGGGGCGTTGCGGAGCAGGCAGCGG
GTGGCACCTGCACGTGCCCTCGCAGAGGGAAAAGTCGCAACAGCGCTCAG
TGCCGCCAGCCGCGGCCCCAGCACAGCGGCCTCACGCTCTGATTCACTGG
CTCAACAAGCGGTGTGCTGGGTCTTTTTTTCAACATTGGATTTTTTTTCA
C

Coding sequence (CDS) from alignment at Contig_40:166217..181267-

>mRNA_8039 ID=mRNA_8039|Name=jgi.p|Trimin1|64909|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=2214bp|location=Sequence derived from alignment at Contig_40:166217..181267- (Tribonema minus UTEX_B_3156 )
ATGGCGCTCAAGGCGGCGCTGCTGATATGCTCGCTTGGCAGCAGCGCGCA
CCTCAGCTTCGCTGGCAGCCTGAGGGGTACAGTCAACACCGATGCGCGCC
AACAGCAACCTGGCAGGAAGCTGCCACCACAATCGCTACCTGTCCCCGCT
TACGAGAAGATCTTCCCGGGCTTGATGGTGGTGGAAAACTTCGAGAAGGG
GGCAGAGGGTTGGGTTGCTGAGTGCGCGGACGTCGCAGAATGGGTTCAGG
TCGGCCAACCGGGGGTCCCGCCTCCGCGCACGCCTGGGACCAAGGGCATG
TATAGGTTCACGGGCGCCAACCAGCCCCTGTGCTCGTCGCTTAACTTTGT
AGTGCCCGGCGCCAACTTTCAACCCGGGGAAGCCTACCATCTGGCGGCAT
GGGTGTACCTGCCCCAGTATGACTGCACAGATGAAATCACATCCCTCAAG
TGCCCCTACCTGAAGTACCAGGCAGATGGCATCGAAGACGGGGCGGGAAC
GCTGCTAACAAGGATACCCAACCGCTGGAATGCAATGTCGGGGACCGTGG
TCAGCCAGGGGGGGGACTTGACTATTCTCATCAAGCAGCTGCCCATGGGC
ACCACGGTGTACATTGACGATGTCTGGCTGACAAACTGCTCTCTGGATAA
CTTCAGAGCCTATTCGCTGCCCAAGATAGCGGATCTGCGCAAGCGCGACG
TCGCGCTGCAGATAGGCCCCGGCATAGCGGGGCAGGCCACCATCACAATG
ACGCGGCACGAGTACCCGTTTGGCGCGACGCTGGCTTCGCCGGACCTGGA
CAACGTGGCGGGTCTGGCGGACCTCTTTCTGCAGCACTTCAACGCCATAA
CCGACGAGTACGAGCAGAAGTGGCCGCAGACGGAGCCGCAGCAGGGGCAG
TTTGCGTGGGACGGCGGCGACGCTATCTACGACTTTGCCGTGCAGAACGA
CCTGGGCATGCGCGGCCACGACATATTTGCAGAGGGAGGGGGGCCCGACT
GGCTGGCCAACCTGCCTGCGGATGGGAGCGCCAACTCTGTGCAGGCGGCC
ATCTGGCAGCGGCTGAACGACTACATTGAGCGCTATGACAAGCATGTTAT
CAACTACGATGTGGTTAATGAGATTACGCACTTCAACAAGATGATAACCT
TATTACCGTGTAAGCCAAACGGCGAAGGCTGTATGTGCCAGTACAAGCCC
GCGTGTGCTGGCATGGCGCTTGCCATCAACACGCCGTGGTGGACGTGGGC
CTGGGCTGCGACGAAGCATGTGCTGACGCTGCGAGGGAGCGGCAACAAGG
GGCTCTACCAGAACGACTACTGCACAGCCAGCTTCTGTGGCGCACCAAAC
GGCATAAGCAACATGGTGCGCCTTCAACCCATCGTCGGCAACACGGGGTA
CGGCAACCAGCTGCACCAGGGGCTTGCCAAGGGGACGTGCGGCTTCGACC
TGCACATGCGCATTGACGAATCTACCAGAGCTACGCCAGGCACCGACTGG
TGGTTCACTGAGTTTGACATCAACGACCCGGACGTCCTCCTCCGCGCCGA
CGGCTACGAAATGGGCTATCTCGCAGGCTTCTCCCACCCCAAGAACATGG
GCATCACGCTGTGGGGGTGGGCTAAGGAGACCGTTGCCTTTGACCAGGAT
GCAAGGCCCTACACGAGCCTCCTGGACAGCCTCGACACACTGCAGTTCAA
CCCTGCGGGCGACCGCGTGCTGGGCGACGACGGACTCCTGCAGAGCACCT
TCAAGAGCACCTACACGCAGGCCATCCCCGCAACGGGCGGCACCATGCTC
ATGAACCTATTCAAGGGCGACTACCAGGTGGCACTGGGCGGCTGCACCGC
CAACTTCAAGGTGCTGAGTGACTTGCCCCTCCAGGCTGGAAACCTCAAGT
GGACGTGCCCCGCGGGTGCCCCAGCAGCGGCAACAGCGCGCGTCGCCAAG
ATCGTCGAGCCCACCGTGCCGGTCAAGAAGGTGATGCCGGTGCCTCCGCC
ACGCCCTGACTATGTACCTTATGTACCCCCCCCTCCCACGAGCGGCTCCC
AGGGCACCAACTCGGGAGGCGACCCCTACGACCCCTACGCCGCCCCTGCG
GACCCCTATGCGCCCCCAGCGGACCCCTATGCGGCCCCAGCTGACCCCTA
TGCGCCCCCGGCCGATCCCTATGCACCCCCAGCCGACCCATATGCGCCGC
CGCCCCCTCAGTAA