mRNA_7983 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|172654
Unique NamemRNA_7983
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|172654 vs. uniprot
Match: A0A836C6U9_9STRA (Tubulin--tyrosine ligase-like protein 9 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C6U9_9STRA)

HSP 1 Score: 856 bits (2211), Expect = 1.250e-313
Identity = 431/431 (100.00%), Postives = 431/431 (100.00%), Query Frame = 1
Query:    1 MEQEGPHRKTDAKSQSGGILRTVKFHTSFVPGSLVHRALSQREGWMETEDASEAELLWVERDAANEVLDATQQFCSKQRINHFRNDRELCRKDLLVKNLKRRKRQLERESSQAPESDTADCYDFWPETYVLPSDYDLFVQAYKTAPDSVWVAKPINGSQGRGIFLFSKLSQISRWRNDGIKREDGPETYVVQHYINKPYLIAGRKFDIRLYALATSFQPLTAYIHRGGFCRFSAVRYQQATAATPDAAMERHLTNVAIQRRGEGYDRTFSGKWDVRSLKLHLVTALGAAAAEALFQRVERLVASSLRAVRDVMITDRRCFELYGYDVLIDADLKPWLLEVNASPALSATTRADHVFKTKLLSDALDVVDVEGRRGGVAPVARMGGFELMCLGGEVAQPKDGSAYRSIVGTDMEYAASERYEASHVIGSRAE 1293
            MEQEGPHRKTDAKSQSGGILRTVKFHTSFVPGSLVHRALSQREGWMETEDASEAELLWVERDAANEVLDATQQFCSKQRINHFRNDRELCRKDLLVKNLKRRKRQLERESSQAPESDTADCYDFWPETYVLPSDYDLFVQAYKTAPDSVWVAKPINGSQGRGIFLFSKLSQISRWRNDGIKREDGPETYVVQHYINKPYLIAGRKFDIRLYALATSFQPLTAYIHRGGFCRFSAVRYQQATAATPDAAMERHLTNVAIQRRGEGYDRTFSGKWDVRSLKLHLVTALGAAAAEALFQRVERLVASSLRAVRDVMITDRRCFELYGYDVLIDADLKPWLLEVNASPALSATTRADHVFKTKLLSDALDVVDVEGRRGGVAPVARMGGFELMCLGGEVAQPKDGSAYRSIVGTDMEYAASERYEASHVIGSRAE
Sbjct:    1 MEQEGPHRKTDAKSQSGGILRTVKFHTSFVPGSLVHRALSQREGWMETEDASEAELLWVERDAANEVLDATQQFCSKQRINHFRNDRELCRKDLLVKNLKRRKRQLERESSQAPESDTADCYDFWPETYVLPSDYDLFVQAYKTAPDSVWVAKPINGSQGRGIFLFSKLSQISRWRNDGIKREDGPETYVVQHYINKPYLIAGRKFDIRLYALATSFQPLTAYIHRGGFCRFSAVRYQQATAATPDAAMERHLTNVAIQRRGEGYDRTFSGKWDVRSLKLHLVTALGAAAAEALFQRVERLVASSLRAVRDVMITDRRCFELYGYDVLIDADLKPWLLEVNASPALSATTRADHVFKTKLLSDALDVVDVEGRRGGVAPVARMGGFELMCLGGEVAQPKDGSAYRSIVGTDMEYAASERYEASHVIGSRAE 431          
BLAST of jgi.p|Trimin1|172654 vs. uniprot
Match: D7FNR7_ECTSI (Tubulin--tyrosine ligase-like protein 9 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNR7_ECTSI)

HSP 1 Score: 392 bits (1006), Expect = 4.960e-130
Identity = 203/393 (51.65%), Postives = 262/393 (66.67%), Query Frame = 1
Query:   67 VKFHTSFVPGSLVHRALSQREGWMETEDASEAELLWVERDAANEVLDATQQFCSKQRINHFRNDRELCRKDLLVKNLKRRKRQLERESSQAPESDTADCYDFWPETYVLPSDYDLFVQAYKTAPDSVWVAKPINGSQGRGIFLFSKLSQISRWRNDGI---KREDGPETYVVQHYINKPYLIAGRKFDIRLYALATSFQPLTAYIHRGGFCRFSAVRYQQATAATPDAAMERHLTNVAIQRRGEGYDRTFSGKWDVRSLKLHLVTALGAAAAEALFQRVERLVASSLRAVRDVMITDRRCFELYGYDVLIDADLKPWLLEVNASPALSATTRADHVFKTKLLSDALDVVDVEGRRGGVAPVARMGGFELMCLGGEVAQPKDGSAYRSIVGTDM 1236
            ++F T+F   + ++ A+ +R GW ET   S+ + +W ERD A +  D T+   + QR+NHFRNDRELCRKDLLVKNLK+RKR +++E  Q      AD +DFWP TYVLP +Y LF +  K   +S W+ KPI  SQGRGIF+ +KLSQIS+W++D      +ED PETYVVQ Y+  PYL+AGRKFD+RLY L TS+ P+T +++R GFCRFS  RY  AT    D  MERHLTN+AIQ+R E YD+ F GKW +R LKLHL+   G AA   LF  ++ L+  SL +V+ VMI D+ CF LYGYD+L D  LKPWLLEVNASP+LSA T AD   K  +LS  LDV+D+EGR  G     R+GGF+L+  GG  +     +  R   G  M
Sbjct:   11 IRFKTTFT--NTIYEAMKRR-GWRETNSDSDWDFIWAERDIAYDTFD-TRHLLNWQRVNHFRNDRELCRKDLLVKNLKKRKRSIQKEGHQGE----ADRHDFWPTTYVLPGEYALFAEESKRRANSKWIMKPIARSQGRGIFIVTKLSQISKWKSDSRWEKTKEDTPETYVVQRYVTNPYLVAGRKFDMRLYVLVTSYMPMTVWVYRSGFCRFSHARYSNATEDLED--MERHLTNIAIQKRTESYDKEFGGKWGIRQLKLHLMALHGVAAVNTLFHEIQSLILRSLLSVQQVMINDKHCFGLYGYDILFDDKLKPWLLEVNASPSLSANTPADKELKVTMLSSVLDVIDLEGRNQG--DEIRVGGFDLIHAGGSTSSTSPSANMRGGGGVGM 391          
BLAST of jgi.p|Trimin1|172654 vs. uniprot
Match: A0A7S1C2X3_9STRA (Tubulin--tyrosine ligase-like protein 9 (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C2X3_9STRA)

HSP 1 Score: 355 bits (911), Expect = 7.300e-116
Identity = 192/395 (48.61%), Postives = 257/395 (65.06%), Query Frame = 1
Query:   61 RTVKFHTSFVPGSLVHRALSQREGWMETEDASEAELLWVERDAANEVLDATQQFCSKQRINHFRNDRELCRKDLLVKNLKRRKRQLERESSQAPESDTADCYDFWPETYVLPSDYDLFVQAYKTAPDSVWVAKPINGSQGRGIFLFSKLSQISRWRNDGIKREDGP--ETYVVQHYINKPYLIAGRKFDIRLYALATSFQPLTAYIHRGGFCRFSAVRYQQATAATPDAAMERHLTNVAIQRRGEGYDRTFSGKWDVRSLKLHLVTALGAAAAEALFQRVERLVASSLRAVRDVMITDRRCFELYGYDVLIDADLKPWLLEVNASPALSATTRADHVFKTKLLSDALDVVDVEGRRGGVAPVARMGGFELMCLGGEVAQPKDGSAYRSIVGTDME 1239
            R + F +SF   + ++  L +R GW ET+   + +L W +R+   EV D+     + QR+NHFRN RELCRKDLL+KN+KR+K+ L+++       D A  Y F P TYVLP DY LFV+ +K  P + W+ KPI  +QG+GIFLF+KLSQIS WR D   + D P  E+YVVQ YI+ PYL+ G+KFD+RLY L TSF PL  Y++R GF RFS  RY  A     +  +  HLTNVAIQ+  + YD    GKWD+RSLKLHL+  +G      LF  +E ++  SL AV+ +MI D+ CFELYGYD+L D DL PWLLEVNASP+LSA T  D+  K K+L+DALDVVD+E R  G     R+GG++L+   G + +P+  S Y + +G D +
Sbjct:   16 RQLLFRSSF--RNTIYDVLKRR-GWKETDSELDWDLHWADREWVYEVFDSIH-LDNWQRVNHFRNGRELCRKDLLIKNVKRQKKVLDKDGQH----DEAAKYSFCPTTYVLPGDYALFVEEFKRHPGAAWIMKPIGKAQGKGIFLFTKLSQISEWRTDYRWKPDNPSVESYVVQQYISNPYLVGGKKFDMRLYVLVTSFSPLVVYMYRSGFARFSHTRYSNAAGDVGNNFV--HLTNVAIQKTADNYDDVAGGKWDLRSLKLHLICRMGIEKTNRLFADIEGIILRSLHAVQKIMINDKHCFELYGYDILFDDDLVPWLLEVNASPSLSANTPEDYDLKFKMLNDALDVVDIEQRTTGREE--RIGGYDLIWSNGPI-RPERASYYTTHLGCDFD 397          
BLAST of jgi.p|Trimin1|172654 vs. uniprot
Match: A0A7S4ED39_9STRA (Tubulin--tyrosine ligase-like protein 9 n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4ED39_9STRA)

HSP 1 Score: 350 bits (899), Expect = 1.060e-113
Identity = 198/401 (49.38%), Postives = 258/401 (64.34%), Query Frame = 1
Query:   64 TVKFHTSFVPGSLVHRALSQREGWMETEDASEAELLWVERDAANEVLDATQQFCSKQRINHFRNDRELCRKDLLVKNLKRRKRQLERESSQAPESDTADCYDFWPETYVLPSDYDLFVQAYKTAPDSVWVAKPINGSQGRGIFLFSKLSQISRWRNDG---IKREDG------PETYVVQHYINKPYLIAGRKFDIRLYALATSFQPLTAYIHRGGFCRFSAVRYQQATAATPDAAMERHLTNVAIQRRGEGYDRTFSGKWDVRSLKLHLVTALGAAAAEALFQRVERLVASSLRAVRDVMITDRRCFELYGYDVLIDADLKPWLLEVNASPALSATTRADHVFKTKLLSDALDVVDVEGRRGGVAPVARMGGFELMCLGGEVAQPKDGSAYRSIVGTDME 1239
            T+KF TSF   + ++  ++ R GW ET+  ++ +  W ER+   EV D T      QR+NHFRN RELCRKDLLVKNLKR KR L+R+     + D A  YDF P ++VLP +Y +FV+ +K +   VW+ KPI  +QGRGIFLFS+LS+IS WR D    + ++D       PE Y+VQ YI  PYL+ G+KFD+RLY L TSF PL AY++RGGF RFS  RY    A   +  +  HLTNVAIQ+  E YD    GK D+RS+KL L    G AA + +F  +ER+V  SL AV+ VMI D+ CFELYGYDVLID +LKPWL+EVNASP+LSA T+ D+  K  +L D LD+VDVEGR  G      +GGF+L+  GG V        + + +GT +E
Sbjct:   79 TIKFRTSFA--NTIYDVMTAR-GWKETDSDTDWDFHWAEREWVYEVFD-TMHLEPHQRLNHFRNGRELCRKDLLVKNLKRMKRGLQRDG----QVDQAKAYDFMPLSFVLPREYAMFVEEFKRS-GGVWIMKPIGSAQGRGIFLFSRLSEISEWRTDPYRHLNKDDKDPPRAEPEAYIVQRYIENPYLVGGKKFDMRLYVLVTSFSPLVAYMYRGGFARFSHTRYSSDPADIANNFV--HLTNVAIQKTAENYDARSGGKKDLRSVKLLLAAEHGMAAVDRVFLAIERVVVRSLIAVQHVMIADKHCFELYGYDVLIDDELKPWLIEVNASPSLSANTKEDYQLKCDMLHDCLDIVDVEGRLRG--DERSVGGFDLVYDGGVVEPDPQDCPWSTRLGTKVE 466          
BLAST of jgi.p|Trimin1|172654 vs. uniprot
Match: A0A5A8E0J4_CAFRO (Tubulin--tyrosine ligase-like protein 9 n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8E0J4_CAFRO)

HSP 1 Score: 348 bits (892), Expect = 1.840e-112
Identity = 193/393 (49.11%), Postives = 257/393 (65.39%), Query Frame = 1
Query:   67 VKFHTSFVPGSLVHRALSQREGWMETEDASEAELLWVERDAANEVLDATQQFCSKQRINHFRNDRELCRKDLLVKNLKRRKRQLERESSQAPESDTADCYDFWPETYVLPSDYDLFVQAYKTAPDSVWVAKPINGSQGRGIFLFSKLSQISRWRNDGIKREDGP--ETYVVQHYINKPYLIAGRKFDIRLYALATSFQPLTAYIHRGGFCRFSAVRYQQATAATPDAAMERHLTNVAIQRRGEGYDRTFSGKWDVRSLKLHLVTALGAAAAEALFQRVERLVASSLRAVRDVMITDRRCFELYGYDVLIDADLKPWLLEVNASPALSATTRADHVFKTKLLSDALDVVDVEGRRGGVAPVARMGGFELMCLGGEVAQPKDGSAYRSIVGTDME 1239
            ++F    V  S     +  + GW ETE   + ++ W +R+   EV DA     S QR+NHFRN RELCRKDLLVKN+KR KR L++  S  PE   A  +DF P T+VLP DY LFV+ +     +VW+ KPI  +QG+GIFLF KLSQIS+W+++   + D P  ETYVVQ YI  PYL+ G+KFD+R+YAL TSF PL  Y+HR GF RFSA RY    A   +A +  HLTNVAIQ+    Y+    GKWD+++LK+ +    G AA +ALF  ++ +V +SL  V+ VMI+DR CFELYGYD+L D DL+PWL+EVNASP+L+A TRAD+  K K+LSD LD+VD+EG R G      +GGF+L+   G V +P     + S++G D +
Sbjct:   29 IRFRVGGVFRSNTIYDVMMKRGWKETESDDDWDMHWADREWVYEVFDAGH-LMSWQRVNHFRNGRELCRKDLLVKNIKRAKRTLDK--SGKPEE--AARFDFCPVTFVLPGDYALFVEEFNRCAGTVWIMKPIGRAQGKGIFLFHKLSQISQWKSEHRWKPDTPGVETYVVQKYIPNPYLVGGKKFDMRMYALVTSFNPLKVYLHRSGFARFSASRYSSDLADIENAFV--HLTNVAIQKTSTEYNADTGGKWDLQALKMFVAAKHGRAACDALFMGMQDIVVNSLLGVQKVMISDRHCFELYGYDLLFDDDLRPWLIEVNASPSLTANTRADYDTKFKMLSDLLDIVDLEGVRTGTERT--VGGFDLIWDDGPV-EPLRTELWTSMLGADFD 411          
BLAST of jgi.p|Trimin1|172654 vs. uniprot
Match: D8LLT6_ECTSI (Tubulin--tyrosine ligase-like protein 9 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLT6_ECTSI)

HSP 1 Score: 340 bits (871), Expect = 7.280e-110
Identity = 187/384 (48.70%), Postives = 245/384 (63.80%), Query Frame = 1
Query:  103 VHRALSQREGWMETEDASEAELLWVERDAANEVLDATQQFCSKQRINHFRNDRELCRKDLLVKNLKRRKRQLERESSQAPESDTADCYDFWPETYVLPSDYDLFVQAYKTAPDSVWVAKPINGSQGRGIFLFSKLSQISRWRNDGIKREDGP--ETYVVQHYINKPYLIAGRKFDIRLYALATSFQPLTAYIHRGGFCRFSAVRYQQATAATPDAAMERHLTNVAIQRRGEGYDRTFSGKWDVRSLKLHLVTALGAAAAEALFQRVERLVASSLRAVRDVMITDRRCFELYGYDVLIDADLKPWLLEVNASPALSATTRADHVFKTKLLSDALDVVDVEGRRGGVAPVARMGGFELMCLGGEVAQPKDGSAYRSIVGTDMEYAA 1248
            V+  L  R G +ET+D  + +L W +     ++ D  Q     QR+NHF N  EL RKDL+VKNLKR ++QLER   QA     A  Y FW  T+VLPS+Y +FV+ +K +P +VW+ KPI  +QGRGIFLF+KLSQIS W+ D   + D P  E Y+ Q Y+  PYLI G+KFD+RLY L TSF PLT +++ GGF RFS  RY    AA  +  +  HLTNVAIQ++ E YD+    KWD++SLK+ L    GA A + LF  ++ L+  SL +V+  +I D+ CFELYGYDVL+DADLKPWLLEVNASP+LSA   AD   KT+L+SD LDVVD+EGR  G     R+G F L+   G     +    Y + +GT+   AA
Sbjct:   24 VYEVLKARPGLVETQDDVDWDLCWADVGWVRDMYDQIQ-MDDDQRLNHFPNHYELTRKDLMVKNLKRMRKQLERNDCQAE----AASYCFWTGTFVLPSEYGMFVEEFKRSPGAVWIMKPIGRAQGRGIFLFNKLSQISEWKKDHRWKADQPQAEAYIAQRYVENPYLIGGKKFDLRLYVLVTSFNPLTVWLYNGGFARFSGTRYCTDRAALANPYV--HLTNVAIQKKAEDYDKEVGCKWDLQSLKMFLTLKHGARAVDELFYDMQCLITRSLLSVQKSIIHDKHCFELYGYDVLVDADLKPWLLEVNASPSLSAENAADKKLKTQLISDVLDVVDLEGRLEG--DEQRVGSFRLIWANGPT-DTRAAGGYSTFLGTEKPRAA 397          
BLAST of jgi.p|Trimin1|172654 vs. uniprot
Match: F0XW04_AURAN (Tubulin--tyrosine ligase-like protein 9 n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XW04_AURAN)

HSP 1 Score: 348 bits (892), Expect = 2.870e-109
Identity = 199/421 (47.27%), Postives = 264/421 (62.71%), Query Frame = 1
Query:   61 RTVKFHTSFVPGSLVHRALSQREGWMETEDASEAELLWVERDAANEVLDATQQFCSKQRINHFRNDRELCRKDLLVKNLKRRKRQLERESSQAPESDTADCYDFWPETYVLPSDYDLFVQAYKTAPDSVWVAKPINGSQGRGIFLFSKLSQISRWRNDG--IKREDG--------PETYVVQHYINKPYLIAGRKFDIRLYALATSFQPLTAYIHRGGFCRFSAVRYQQATAATPDAAMER--------------HLTNVAIQRRGEGYDRTFSGKWDVRSLKLHLVTALGAAAAEALFQRVERLVASSLRAVRDVMITDRRCFELYGYDVLIDADLKPWLLEVNASPALSATTRADHVFKTKLLSDALDVVDVEGRRGGVAPVARMGGFELMCLGGEVAQPKDGSAYRSIVGTDMEYAAS 1251
            R+V+F TSF   + ++  ++ R  W ET+  ++ ++ W ER+   EV D T      QRINHFRN RELCRKDLLVKNLKR KR L+R+     + + A  YDF P ++VLP +Y +FV+ +K     VW+ KPI  +QGRGIFLFS+LS+IS WR D   ++R+ G        PE Y+VQ YI  PYL+ G+KFDIRLY L TSF PL A+++RGGF RFS  RY  A       ++                HLTNVAIQ+  E YD    GK D+RSLKL L T  G AA + LF  +ER++  SL AV+ VMI D+ CFELYGYDVLID +LKPWL+EVNASP+L+A T+ D++ K ++L+D LD+VDVE +  G      +GGF+L+  GG V        Y + +GT +E  A+
Sbjct:    7 RSVRFRTSF--SNTIYDVMTSR-NWKETDSETDWDVHWAEREWVYEVFD-TMHLEPHQRINHFRNGRELCRKDLLVKNLKRMKRNLQRDG----QLEQARAYDFMPLSFVLPREYAMFVEEFKRC-GGVWIMKPIGSAQGRGIFLFSRLSEISEWRTDPRHLQRDGGDRDSQRAEPEAYIVQRYIENPYLVGGKKFDIRLYVLVTSFSPLVAFMYRGGFARFSHTRYSSAAPRPNTESVFANVVSDPADIANNFVHLTNVAIQKTAENYDARSGGKKDLRSLKLLLATQHGMAAVDQLFLAIERVIVRSLIAVQHVMIADKHCFELYGYDVLIDDELKPWLIEVNASPSLTANTKDDYILKCEMLNDTLDIVDVEAKLNG--DERSVGGFDLVYDGGIVEPDPAECPYSTKLGTYIERQAA 416          
BLAST of jgi.p|Trimin1|172654 vs. uniprot
Match: A0A2K3CNV5_CHLRE (Tubulin--tyrosine ligase-like protein 9 n=7 Tax=Chlamydomonadales TaxID=3042 RepID=A0A2K3CNV5_CHLRE)

HSP 1 Score: 337 bits (865), Expect = 4.000e-109
Identity = 178/383 (46.48%), Postives = 247/383 (64.49%), Query Frame = 1
Query:  103 VHRALSQREGWMETEDASEAELLWVERDAANEVLDATQQFCSKQRINHFRNDRELCRKDLLVKNLKRRKRQLERESSQAPESDTADCYDFWPETYVLPSDYDLFVQAYKTAPDSVWVAKPINGSQGRGIFLFSKLSQISRWRNDGIKR--------EDGPETYVVQHYINKPYLIAGRKFDIRLYALATSFQPLTAYIHRGGFCRFSAVRYQQATAATPDAAMERHLTNVAIQRRGEGYDRTFSGKWDVRSLKLHLVTALGAAAAEALFQRVERLVASSLRAVRDVMITDRRCFELYGYDVLIDADLKPWLLEVNASPALSATTRADHVFKTKLLSDALDVVDVEGRRGGVAPVARMGGFELMCLGGEVAQPKDGSAYRSIVG 1227
            ++  L  +  W+ETE  ++ +  W ++   +  LD        QRINHF N  EL RKDLL+KNLKR KRQLE+E   A  +     Y+F+P TYV+PS+Y +FV+ +K +   VW+ KPI  +QG+GIFLF+KLSQIS WR D   +        ++GPETY+ Q Y+  PYL+ G+KFD+R+YAL TS+ PL  ++HR GF RF+  RY        +  M  HLTNVAIQ+   G+D     KW +RSL+ ++ T  G AAA  LF  ++ ++  +L AV+  MI D+ CFELYGYDV+IDA+LKPWL+EVNASP+L+A+ RAD V KT +L D LD+VD+EGRR G     R+GGF+L+  GG V +    ++  S++G
Sbjct:   26 IYDVLQSKTEWVETESETDWDFFWADKGWIHHELDKLH-LADWQRINHFPNHYELTRKDLLIKNLKRAKRQLEKEERHAEAAQ----YNFFPLTYVVPSEYRMFVEEFKRS-GGVWIMKPIGKAQGQGIFLFNKLSQISDWRRDHTWKPGQEPQEGDEGPETYLAQRYLEAPYLVGGKKFDLRIYALVTSYNPLRIFLHRSGFARFTNTRYSTRKEDITNTYM--HLTNVAIQKHAPGFDSQKGMKWSIRSLRTYITTKHGEAAAAELFHAIQNIIIRALLAVQPAMINDKHCFELYGYDVMIDANLKPWLIEVNASPSLTASDRADWVLKTAMLEDLLDIVDLEGRREGGKVELRLGGFDLIWDGGPVMRFDKPTSLPSMLG 400          
BLAST of jgi.p|Trimin1|172654 vs. uniprot
Match: A0A5D6XLL5_9STRA (Tubulin--tyrosine ligase-like protein 9 n=2 Tax=Pythiaceae TaxID=4782 RepID=A0A5D6XLL5_9STRA)

HSP 1 Score: 338 bits (866), Expect = 6.560e-109
Identity = 184/404 (45.54%), Postives = 264/404 (65.35%), Query Frame = 1
Query:   55 ILRTVKFHTSFVPGSLVHRALSQREGWMETEDASEAELLWVERDAANEVLDATQQFCSKQRINHFRNDRELCRKDLLVKNLKRRKRQLER----ESSQAPESDTADCYDFWPETYVLPSDYDLFVQAYKTAPDSVWVAKPINGSQGRGIFLFSKLSQISRWRNDGIKREDGP--ETYVVQHYINKPYLIAGRKFDIRLYALATSFQPLTAYIHRGGFCRFSAVRYQQATAATPDAAMERHLTNVAIQRRGEGYDRTFSGKWDVRSLKLHLVTALGAAAAEALFQRVERLVASSLRAVRDVMITDRRCFELYGYDVLIDADLKPWLLEVNASPALSATTRADHVFKTKLLSDALDVVDVEGRRGGVAPVARMGGFELMCLGGEVAQPKDGSAYRSIVGTDMEYAA 1248
            I   +KF T+F   + ++  L +R GW ET D S+ +  W +R+   E+LD T    + Q++NHFRN RELCRKDLL+KNLKR KR +E+    E S + E+D+   YDF+P TY+LP +Y +FV+ +K     +W+ KPI  +QG+GIFLF+KLSQIS W+ D     +    ETYVVQ YI+ PYL+ G+KFD+RLYAL  SF PL  Y+ RGGF RF+  RY    +   ++ +  HLTNVAIQ+  E Y++   GKWD+R+LKL++++  G      LF  ++ ++  SL ++  +MI D+ CFELYGYD++ID +LKPWLLEVNASP+LSA T +D+  K  +L+D LD++DVE  + G     RMGGF+L+   G + +  +   Y S +G D++ A+
Sbjct:   63 ISAVLKFKTNF--RNTIYDTLLRR-GWKETSD-SDWDFYWADREYIYELLD-TVHLENGQKVNHFRNGRELCRKDLLIKNLKRAKRAMEKKAKAEDSSSTETDSLGLYDFFPITYILPGEYAIFVEEFKRN-QGIWIMKPIGKAQGKGIFLFTKLSQISDWKTDYRWHPENHQVETYVVQKYISNPYLVGGKKFDLRLYALVPSFAPLEIYLFRGGFARFTNARYSNNPSDIANSFI--HLTNVAIQKTSENYNKKHGGKWDLRNLKLYMMSKHGPERINKLFFEIQMVIIKSLLSIEKIMINDKHCFELYGYDIMIDENLKPWLLEVNASPSLSANTASDYQLKCGMLNDMLDIIDVENNKPGGEE--RMGGFDLVYRDGFLKK-NESCVYTSTLGLDIKRAS 455          
BLAST of jgi.p|Trimin1|172654 vs. uniprot
Match: A0A6A3SH87_9STRA (Tubulin--tyrosine ligase-like protein 9 n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A3SH87_9STRA)

HSP 1 Score: 336 bits (861), Expect = 9.520e-108
Identity = 184/422 (43.60%), Postives = 267/422 (63.27%), Query Frame = 1
Query:   25 KTDAKSQSGGILRT----VKFHTSFVPGSLVHRALSQREGWMETEDASEAELLWVERDAANEVLDATQQFCSKQRINHFRNDRELCRKDLLVKNLKRRKRQLER----ESSQAPESDTA-DCYDFWPETYVLPSDYDLFVQAYKTAPDSVWVAKPINGSQGRGIFLFSKLSQISRWRNDGIKREDGP--ETYVVQHYINKPYLIAGRKFDIRLYALATSFQPLTAYIHRGGFCRFSAVRYQQATAATPDAAMERHLTNVAIQRRGEGYDRTFSGKWDVRSLKLHLVTALGAAAAEALFQRVERLVASSLRAVRDVMITDRRCFELYGYDVLIDADLKPWLLEVNASPALSATTRADHVFKTKLLSDALDVVDVEGRRGGVAPVARMGGFELMCLGGEVAQPKDGSAYRSIVGTDMEYAASER 1257
            K  A + SGG   T    ++F T+F   + ++  L +R GW ET + ++ +  W +R+   E+LD T    + QR+NH+RN RELCRKDLL+KNLKR KRQ+++    E +   E DT    YDF+P TY+LP +Y +FV+ +K     VW+ KPI  +QG+GIFLF+KLSQIS WR D   R +    ETYVVQ YI+ PYL+ G+KFD+RLYAL  SF PL  Y+ RGGF RF+  RY    +   ++ +  HLTNVA+Q+  E Y++   GKWD+R+LKL +++  G      LF  ++ ++  SL +V  +++ D+ CFELYGYDV+ID +LKPWLLEVNASP+LSA T +D+  K  +L+D LD++D+E ++        +GGF+L+   G V +  +   Y + +G D +   + R
Sbjct:   69 KGGASNSSGGAATTSNSVIRFKTTF--RNTIYDTLLRR-GWKETTE-NDWDFYWADREYIYELLD-TAHLENTQRVNHYRNGRELCRKDLLIKNLKRAKRQMDKKARSEDAAMSELDTVLGSYDFFPVTYILPGEYAIFVEEFKRN-QGVWIMKPIGKAQGKGIFLFTKLSQISEWRTDFRWRPENQQVETYVVQRYISNPYLVGGKKFDLRLYALVPSFFPLEIYLFRGGFARFTNSRYSNNHSDIANSFI--HLTNVAVQKTSENYNKKHGGKWDLRNLKLFMMSKHGPERINKLFYEIQLVIIKSLLSVEKIIMNDKHCFELYGYDVMIDENLKPWLLEVNASPSLSANTSSDYQLKCGMLNDMLDIIDLENKKPEGVVREHVGGFDLVYRDGNVVKKSESCMYTTFLGADWQRTPATR 482          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|172654 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836C6U9_9STRA1.250e-313100.00Tubulin--tyrosine ligase-like protein 9 n=1 Tax=Tr... [more]
D7FNR7_ECTSI4.960e-13051.65Tubulin--tyrosine ligase-like protein 9 n=1 Tax=Ec... [more]
A0A7S1C2X3_9STRA7.300e-11648.61Tubulin--tyrosine ligase-like protein 9 (Fragment)... [more]
A0A7S4ED39_9STRA1.060e-11349.38Tubulin--tyrosine ligase-like protein 9 n=2 Tax=Pe... [more]
A0A5A8E0J4_CAFRO1.840e-11249.11Tubulin--tyrosine ligase-like protein 9 n=2 Tax=Ca... [more]
D8LLT6_ECTSI7.280e-11048.70Tubulin--tyrosine ligase-like protein 9 n=1 Tax=Ec... [more]
F0XW04_AURAN2.870e-10947.27Tubulin--tyrosine ligase-like protein 9 n=1 Tax=Au... [more]
A0A2K3CNV5_CHLRE4.000e-10946.48Tubulin--tyrosine ligase-like protein 9 n=7 Tax=Ch... [more]
A0A5D6XLL5_9STRA6.560e-10945.54Tubulin--tyrosine ligase-like protein 9 n=2 Tax=Py... [more]
A0A6A3SH87_9STRA9.520e-10843.60Tubulin--tyrosine ligase-like protein 9 n=5 Tax=Ph... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_94contigContig_94:393192..394487 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|172654|e_gw1.94.189.1
BRITEko00000,ko01000,ko04812
KEGG koko:K16603
Preferred nameTTLL9
Descriptionprotein polyglycylation
COG categoryS
Max annot lvl2759|Eukaryota
EggNOG OGsKOG2157@1|root,KOG2157@2759|Eukaryota
Evalue8.14e-131
Seed ortholog2880.D7FNR7
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionTubulin-tyrosine ligase/Tubulin polyglutamylase
Ec32 orthologEc-01_004520.1
TranscriptId172976
TrackFilteredModels1
ProteinId172654
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|172654gene_7983Tribonema minus UTEX_B_3156 geneContig_94 393192..394487 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_7983_1exon_7983_1Tribonema minus UTEX_B_3156 exonContig_94 393192..394487 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_7983CDS_7983Tribonema minus UTEX_B_3156 CDSContig_94 393192..394487 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|172654Trimin1|172654|e_gw1.94.189.1Tribonema minus UTEX_B_3156 polypeptideContig_94 393192..394487 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_7983 ID=mRNA_7983|Name=jgi.p|Trimin1|172654|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1296bp|location=Sequence derived from alignment at Contig_94:393192..394487+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGAGCAGGAAGGGCCTCACCGGAAGACTGACGCTAAATCCCAGTCAGG
CGGAATCTTACGTACCGTCAAGTTCCACACTTCGTTTGTGCCTGGGAGCC
TGGTGCATCGTGCGCTCTCTCAGCGGGAAGGATGGATGGAGACCGAGGAT
GCATCAGAAGCGGAGTTGCTTTGGGTGGAACGCGATGCGGCCAACGAGGT
CCTTGACGCCACGCAGCAGTTCTGCAGTAAACAACGCATCAATCACTTTC
GCAACGACCGGGAGCTGTGCAGGAAGGATCTGCTTGTCAAGAACCTGAAG
CGGCGCAAGCGACAACTGGAAAGAGAAAGCTCGCAAGCACCTGAGAGTGA
CACGGCTGATTGCTACGACTTCTGGCCTGAAACGTATGTACTGCCCAGCG
ATTATGACCTGTTTGTACAGGCCTACAAGACTGCTCCAGATAGTGTTTGG
GTTGCCAAGCCCATCAACGGCAGCCAGGGCAGGGGCATTTTCCTGTTCTC
AAAGCTCAGCCAGATCAGCAGGTGGCGCAACGACGGCATCAAACGGGAGG
ACGGCCCGGAAACATACGTGGTGCAGCACTACATCAACAAGCCCTACCTC
ATAGCCGGCCGCAAGTTCGACATTCGGCTGTACGCGCTGGCGACGTCTTT
CCAGCCGCTGACGGCGTACATCCACAGGGGCGGCTTCTGCCGCTTCAGCG
CCGTGCGCTACCAGCAGGCCACGGCCGCAACGCCGGACGCCGCCATGGAG
CGCCACCTGACAAACGTCGCGATACAGCGGCGCGGCGAGGGCTACGACAG
GACGTTCAGCGGCAAGTGGGACGTGCGCTCGCTCAAGCTGCACCTCGTGA
CGGCGCTCGGCGCGGCCGCCGCGGAGGCGCTCTTCCAGCGCGTGGAGCGC
CTCGTCGCGAGCTCGCTGCGCGCCGTGCGGGACGTCATGATCACCGACCG
GCGCTGCTTCGAGCTGTACGGCTACGACGTGCTCATCGACGCGGACCTCA
AGCCGTGGCTGCTGGAGGTGAACGCGTCGCCCGCGCTGAGCGCGACCACG
CGCGCGGACCACGTCTTCAAGACCAAGCTGCTGAGCGATGCGCTGGACGT
GGTGGATGTGGAGGGTCGCAGGGGGGGGGTGGCGCCAGTCGCGCGCATGG
GGGGGTTCGAGCTCATGTGCCTCGGGGGGGAGGTCGCGCAGCCGAAGGAC
GGCAGCGCGTACAGGTCCATCGTAGGCACGGATATGGAGTACGCCGCCAG
CGAGCGCTATGAGGCCAGTCACGTGATTGGCAGTAGAGCAGAGTGA
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protein sequence of jgi.p|Trimin1|172654

>Trimin1|172654|e_gw1.94.189.1 ID=Trimin1|172654|e_gw1.94.189.1|Name=jgi.p|Trimin1|172654|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=432bp
MEQEGPHRKTDAKSQSGGILRTVKFHTSFVPGSLVHRALSQREGWMETED
ASEAELLWVERDAANEVLDATQQFCSKQRINHFRNDRELCRKDLLVKNLK
RRKRQLERESSQAPESDTADCYDFWPETYVLPSDYDLFVQAYKTAPDSVW
VAKPINGSQGRGIFLFSKLSQISRWRNDGIKREDGPETYVVQHYINKPYL
IAGRKFDIRLYALATSFQPLTAYIHRGGFCRFSAVRYQQATAATPDAAME
RHLTNVAIQRRGEGYDRTFSGKWDVRSLKLHLVTALGAAAAEALFQRVER
LVASSLRAVRDVMITDRRCFELYGYDVLIDADLKPWLLEVNASPALSATT
RADHVFKTKLLSDALDVVDVEGRRGGVAPVARMGGFELMCLGGEVAQPKD
GSAYRSIVGTDMEYAASERYEASHVIGSRAE*
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mRNA from alignment at Contig_94:393192..394487+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_7983 ID=mRNA_7983|Name=jgi.p|Trimin1|172654|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1296bp|location=Sequence derived from alignment at Contig_94:393192..394487+ (Tribonema minus UTEX_B_3156 )
ATGGAGCAGGAAGGGCCTCACCGGAAGACTGACGCTAAATCCCAGTCAGG CGGAATCTTACGTACCGTCAAGTTCCACACTTCGTTTGTGCCTGGGAGCC TGGTGCATCGTGCGCTCTCTCAGCGGGAAGGATGGATGGAGACCGAGGAT GCATCAGAAGCGGAGTTGCTTTGGGTGGAACGCGATGCGGCCAACGAGGT CCTTGACGCCACGCAGCAGTTCTGCAGTAAACAACGCATCAATCACTTTC GCAACGACCGGGAGCTGTGCAGGAAGGATCTGCTTGTCAAGAACCTGAAG CGGCGCAAGCGACAACTGGAAAGAGAAAGCTCGCAAGCACCTGAGAGTGA CACGGCTGATTGCTACGACTTCTGGCCTGAAACGTATGTACTGCCCAGCG ATTATGACCTGTTTGTACAGGCCTACAAGACTGCTCCAGATAGTGTTTGG GTTGCCAAGCCCATCAACGGCAGCCAGGGCAGGGGCATTTTCCTGTTCTC AAAGCTCAGCCAGATCAGCAGGTGGCGCAACGACGGCATCAAACGGGAGG ACGGCCCGGAAACATACGTGGTGCAGCACTACATCAACAAGCCCTACCTC ATAGCCGGCCGCAAGTTCGACATTCGGCTGTACGCGCTGGCGACGTCTTT CCAGCCGCTGACGGCGTACATCCACAGGGGCGGCTTCTGCCGCTTCAGCG CCGTGCGCTACCAGCAGGCCACGGCCGCAACGCCGGACGCCGCCATGGAG CGCCACCTGACAAACGTCGCGATACAGCGGCGCGGCGAGGGCTACGACAG GACGTTCAGCGGCAAGTGGGACGTGCGCTCGCTCAAGCTGCACCTCGTGA CGGCGCTCGGCGCGGCCGCCGCGGAGGCGCTCTTCCAGCGCGTGGAGCGC CTCGTCGCGAGCTCGCTGCGCGCCGTGCGGGACGTCATGATCACCGACCG GCGCTGCTTCGAGCTGTACGGCTACGACGTGCTCATCGACGCGGACCTCA AGCCGTGGCTGCTGGAGGTGAACGCGTCGCCCGCGCTGAGCGCGACCACG CGCGCGGACCACGTCTTCAAGACCAAGCTGCTGAGCGATGCGCTGGACGT GGTGGATGTGGAGGGTCGCAGGGGGGGGGTGGCGCCAGTCGCGCGCATGG GGGGGTTCGAGCTCATGTGCCTCGGGGGGGAGGTCGCGCAGCCGAAGGAC GGCAGCGCGTACAGGTCCATCGTAGGCACGGATATGGAGTACGCCGCCAG CGAGCGCTATGAGGCCAGTCACGTGATTGGCAGTAGAGCAGAGTGA
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Coding sequence (CDS) from alignment at Contig_94:393192..394487+

>mRNA_7983 ID=mRNA_7983|Name=jgi.p|Trimin1|172654|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1296bp|location=Sequence derived from alignment at Contig_94:393192..394487+ (Tribonema minus UTEX_B_3156 )
ATGGAGCAGGAAGGGCCTCACCGGAAGACTGACGCTAAATCCCAGTCAGG
CGGAATCTTACGTACCGTCAAGTTCCACACTTCGTTTGTGCCTGGGAGCC
TGGTGCATCGTGCGCTCTCTCAGCGGGAAGGATGGATGGAGACCGAGGAT
GCATCAGAAGCGGAGTTGCTTTGGGTGGAACGCGATGCGGCCAACGAGGT
CCTTGACGCCACGCAGCAGTTCTGCAGTAAACAACGCATCAATCACTTTC
GCAACGACCGGGAGCTGTGCAGGAAGGATCTGCTTGTCAAGAACCTGAAG
CGGCGCAAGCGACAACTGGAAAGAGAAAGCTCGCAAGCACCTGAGAGTGA
CACGGCTGATTGCTACGACTTCTGGCCTGAAACGTATGTACTGCCCAGCG
ATTATGACCTGTTTGTACAGGCCTACAAGACTGCTCCAGATAGTGTTTGG
GTTGCCAAGCCCATCAACGGCAGCCAGGGCAGGGGCATTTTCCTGTTCTC
AAAGCTCAGCCAGATCAGCAGGTGGCGCAACGACGGCATCAAACGGGAGG
ACGGCCCGGAAACATACGTGGTGCAGCACTACATCAACAAGCCCTACCTC
ATAGCCGGCCGCAAGTTCGACATTCGGCTGTACGCGCTGGCGACGTCTTT
CCAGCCGCTGACGGCGTACATCCACAGGGGCGGCTTCTGCCGCTTCAGCG
CCGTGCGCTACCAGCAGGCCACGGCCGCAACGCCGGACGCCGCCATGGAG
CGCCACCTGACAAACGTCGCGATACAGCGGCGCGGCGAGGGCTACGACAG
GACGTTCAGCGGCAAGTGGGACGTGCGCTCGCTCAAGCTGCACCTCGTGA
CGGCGCTCGGCGCGGCCGCCGCGGAGGCGCTCTTCCAGCGCGTGGAGCGC
CTCGTCGCGAGCTCGCTGCGCGCCGTGCGGGACGTCATGATCACCGACCG
GCGCTGCTTCGAGCTGTACGGCTACGACGTGCTCATCGACGCGGACCTCA
AGCCGTGGCTGCTGGAGGTGAACGCGTCGCCCGCGCTGAGCGCGACCACG
CGCGCGGACCACGTCTTCAAGACCAAGCTGCTGAGCGATGCGCTGGACGT
GGTGGATGTGGAGGGTCGCAGGGGGGGGGTGGCGCCAGTCGCGCGCATGG
GGGGGTTCGAGCTCATGTGCCTCGGGGGGGAGGTCGCGCAGCCGAAGGAC
GGCAGCGCGTACAGGTCCATCGTAGGCACGGATATGGAGTACGCCGCCAG
CGAGCGCTATGAGGCCAGTCACGTGATTGGCAGTAGAGCAGAGTGA
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