mRNA_7951 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|100042 vs. uniprot
Match: A0A836C8C1_9STRA (Acylphosphatase-like domain-containing protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8C1_9STRA) HSP 1 Score: 339 bits (869), Expect = 4.640e-117 Identity = 164/164 (100.00%), Postives = 164/164 (100.00%), Query Frame = 1 Query: 64 MAVLLLLPAVRPDAEVNVPRGWRKSDRFYGFRYEVRGLVQDVGFLQAAVHAAEELGCFGWIQNSKVNTVVGEARCSKLDGPKMVEFLRFGPDDARVTEVLVKPYEDTKIKLHFASFLALPDERKTCFRAIPHQCPEYAGPVAPPADTSYQDHSLTADVRAKSEL 555 MAVLLLLPAVRPDAEVNVPRGWRKSDRFYGFRYEVRGLVQDVGFLQAAVHAAEELGCFGWIQNSKVNTVVGEARCSKLDGPKMVEFLRFGPDDARVTEVLVKPYEDTKIKLHFASFLALPDERKTCFRAIPHQCPEYAGPVAPPADTSYQDHSLTADVRAKSEL Sbjct: 1 MAVLLLLPAVRPDAEVNVPRGWRKSDRFYGFRYEVRGLVQDVGFLQAAVHAAEELGCFGWIQNSKVNTVVGEARCSKLDGPKMVEFLRFGPDDARVTEVLVKPYEDTKIKLHFASFLALPDERKTCFRAIPHQCPEYAGPVAPPADTSYQDHSLTADVRAKSEL 164
BLAST of jgi.p|Trimin1|100042 vs. uniprot
Match: A0A6U1NP13_9STRA (Acylphosphatase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1NP13_9STRA) HSP 1 Score: 151 bits (381), Expect = 1.500e-42 Identity = 83/166 (50.00%), Postives = 95/166 (57.23%), Query Frame = 1 Query: 118 PRGWRKSDRFYGFRYEVRGLVQDVGFLQAAVHAAEELGCFGWIQNSKVNTVVGEARCSKLDGPKMVEFLRFGPDDAR------------------------------VTEVLVKPYEDTKIKLHFASFLALPDERKTCFRAIPHQCPEYAGPVAPPADTSYQDHSL 525 P GWR DRFYGFR+EV G VQDVGF ++ AAE LGCFGW+QN+ TVVGE RCSK +GP +V +LR GP A VT V VK YEDTKIKLHF+ F LPD R TCFR PHQC E+A AP +T+ H L Sbjct: 27 PEGWRMVDRFYGFRFEVSGTVQDVGFRKSTQDAAEVLGCFGWVQNTDHGTVVGEGRCSKWNGPLLVGWLRAGPTAAAEAAAASEDENIAGSLVALANQLPRQAVGSLVTSVEVKEYEDTKIKLHFSHFKILPDTRVTCFRDPPHQCAEFAS-NAPGHETATTHHEL 191
BLAST of jgi.p|Trimin1|100042 vs. uniprot
Match: A0A6H5KAR1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAR1_9PHAE) HSP 1 Score: 137 bits (346), Expect = 2.690e-37 Identity = 74/156 (47.44%), Postives = 99/156 (63.46%), Query Frame = 1 Query: 49 SALSLMAVLLLLPAVRPDAEVNVPRGWRKSDRFYGFRYEV---RGLVQDVGFLQAAVHAAEELGCFGWIQNSKVNTVVGEARCSKLDGPKMVEFLRFGP--DDARVTEVLVKPYEDTKIKLHFASFLALPDERKTCFRAIPHQCPEYAGPVAPPAD 501 +AL L+A+ ++ A D + N+P+GWR DR++GFRYE +G + D + +AA AA+EL CFGW+Q + +T+ GE+RCSK G KM LR GP + V K Y DTKIKLHF+ F L +ERKTCFR PHQCPE++ P AD Sbjct: 6 NALLLLALAPVVSAELVD-DFNIPKGWRMQDRYHGFRYEATVDQGCLFDA-YAEAAQAAADELACFGWVQRTSPSTMAGESRCSKATGEKMQGRLRQGPPGNGCDVVGFETKDYADTKIKLHFSHFKILDEERKTCFRDTPHQCPEFSAKKNPEAD 159
BLAST of jgi.p|Trimin1|100042 vs. uniprot
Match: A0A7S3JVZ0_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JVZ0_9STRA) HSP 1 Score: 136 bits (342), Expect = 4.470e-37 Identity = 65/118 (55.08%), Postives = 82/118 (69.49%), Query Frame = 1 Query: 124 GWRKSDRFYGFRYEVRGLVQDVGFLQAAVHAAEELGCFGWIQNSKVNTVVGEARCSKLDGPKMVEFLRFGPDDARVTEVLVKPYEDTKIKLHFASFLALPDERKTCFRAI-PHQCPEY 474 GWR DRF GFR+E++G VQD+GF +A A+EL CFGWIQ S++ T+VGEARC+K G + +FLR GPD A V + + Y DTKIKLHF+ F L +R TCFR PHQC E+ Sbjct: 29 GWRMIDRFMGFRFEIQGQVQDIGFEEAVRDKADELACFGWIQESELGTMVGEARCAKAVGNILKDFLRMGPDGADVEDANILDYPDTKIKLHFSYFKILTGDRVTCFREPGPHQCLEF 146
BLAST of jgi.p|Trimin1|100042 vs. uniprot
Match: A0A7S3ZVT6_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZVT6_9STRA) HSP 1 Score: 120 bits (302), Expect = 6.420e-31 Identity = 64/116 (55.17%), Postives = 75/116 (64.66%), Query Frame = 1 Query: 124 GWRKSDRFYGFRYEVRG--LVQDVGFLQAAVHAAEELGCFGWIQNSKVNTVVGEARCSKLDGPKMVEFLRFGPDDARVTEVLVKPYEDTKIKLHFASFLALPDERKTCFRAIPHQC 465 GWR DRF GFRYEV+G +VQ GF AA A+ELGCFGWIQ+S+ TVVGEARC+K + FLR G + V V + Y DTKIKLHF+ F L +R TCF A PH C Sbjct: 25 GWRMVDRFAGFRYEVKGPHVVQS-GFHTAAEKLADELGCFGWIQDSEFRTVVGEARCAKTVADRFKAFLREGHPTSEVEAVDIYDYPDTKIKLHFSHFKRLGSDRVTCFPAPPHAC 139
BLAST of jgi.p|Trimin1|100042 vs. uniprot
Match: A0A7S4VH54_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4VH54_9STRA) HSP 1 Score: 114 bits (285), Expect = 5.740e-29 Identity = 54/117 (46.15%), Postives = 77/117 (65.81%), Query Frame = 1 Query: 124 GWRKSDRFYGFRYEVRGLVQDVGFLQAAVHAAEELGCFGWIQNSKVNTVVGEARCSKLDGPKMVEFLRFGPDDARVTEVLVKPYEDTKIKLHFASFLALPDERKTCFRAIPHQCPEY 474 GW+ +DRF GFRYEV G V+D+G + A++L CFGW + S NTVVGE RC+K G M +++ + ++V +K Y+DTKIKLHF+ F + D R+TCFR PH+C ++ Sbjct: 10 GWKMTDRFIGFRYEVYGNVKDIGIREKIKEKADKLACFGWARYSPQNTVVGEVRCNKNAGKVMKGWIK-----SMTSKVDLKEYDDTKIKLHFSHFKIIFDGRETCFRDEPHRCDQF 121
BLAST of jgi.p|Trimin1|100042 vs. uniprot
Match: A0A1V9YZT2_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YZT2_9STRA) HSP 1 Score: 87.8 bits (216), Expect = 3.690e-17 Identity = 45/110 (40.91%), Postives = 62/110 (56.36%), Query Frame = 1 Query: 136 SDRFYGFRYEVRGLVQDVGFLQAAVHAAEELGCFGWIQNSKVNTVVGEARCSKLDGPKMVEFLRFGPDDARVTEVLVKPYEDTKIKLHFASFLALPDERKTCFRAIPHQC 465 ++RFYGFRYE+ G D+ + A A GCFGW+Q S ++VVGE RC+K+ G ++L+ + V Y+ TKI+ HF SF L R+TCF PH C Sbjct: 178 TERFYGFRYEIFGKNDDI--VAAIKDKAVRNGCFGWVQISSFDSVVGEIRCNKIQGQSTHKWLK------ATWQSQVFVYDSTKIRFHFTSFRHLDPSRRTCFTTPPHSC 279
BLAST of jgi.p|Trimin1|100042 vs. uniprot
Match: A0A7S3VHB0_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3VHB0_9STRA) HSP 1 Score: 85.5 bits (210), Expect = 7.380e-17 Identity = 51/149 (34.23%), Postives = 72/149 (48.32%), Query Frame = 1 Query: 127 WRKSDRFYGFRYEVR--GLVQDVGF----------LQAAVHAAEELGCFGWIQNSKVNTVVGEARCSKLDGPKMVEFL-------------RFGPDDARVTE----VLVKPYEDTKIKLHFASFLALPDERKTCFRAIPHQCPEYAGPV 486 W+ +DRF GFR+E+R + G + V A+ L CFGW+Q + +T+VGEARC+ +G K L P + + T+ + +K Y DTKIKLHF+ F L R+TCF PHQC P+ Sbjct: 66 WKMTDRFSGFRFEIRVPATFETSGINTPQFSRSRTIDRIVAKADTLFCFGWVQETNKDTLVGEARCTTQNGWKFKRDLVDLELSLPHDPTTNNDPHNKKTTDREQLITIKDYNDTKIKLHFSHFKVLDPGRETCFNDEPHQCENLLVPM 214
BLAST of jgi.p|Trimin1|100042 vs. uniprot
Match: W4GDP4_9STRA (Acylphosphatase-like domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GDP4_9STRA) HSP 1 Score: 78.2 bits (191), Expect = 7.830e-15 Identity = 41/107 (38.32%), Postives = 52/107 (48.60%), Query Frame = 1 Query: 145 FYGFRYEVRGLVQDVGFLQAAVHAAEELGCFGWIQNSKVNTVVGEARCSKLDGPKMVEFLRFGPDDARVTEVLVKPYEDTKIKLHFASFLALPDERKTCFRAIPHQC 465 FYGFR+E + A V A CFGW+Q + +VGE RC G M ++ ARV YE TKI+ HF SF L R+TCF++ PH C Sbjct: 26 FYGFRFETP--APTASLMSAVVDQARSHACFGWVQTTAQEHLVGEVRCRGQHGTAMQTWIESSHPQARV-----HVYESTKIRYHFTSFRVLEASRRTCFQSAPHAC 125
BLAST of jgi.p|Trimin1|100042 vs. uniprot
Match: A0A6G0WNF7_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WNF7_9STRA) HSP 1 Score: 74.3 bits (181), Expect = 2.160e-13 Identity = 44/109 (40.37%), Postives = 58/109 (53.21%), Query Frame = 1 Query: 145 FYGFRYEVR--GLVQDVGFLQAAVHAAEELGCFGWIQNSKVNTVVGEARCSKLDGPKMVEFLRFGPDDARVTEVLVKPYEDTKIKLHFASFLALPDERKTCFRAIPHQC 465 F+GFR+E+R L + QA HA CFGW+Q + +++VGE RC G M ++ P VLV Y TKI+ HF SF L ER+TCF+ PH C Sbjct: 27 FHGFRFELRDPSLSPEKIADQARKHA-----CFGWVQPTPRDSLVGEVRCRGRHGQNMQSWIESNPQ----ANVLV--YPSTKIRYHFTSFRVLDRERRTCFQTAPHAC 124 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|100042 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 14
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_7951 ID=mRNA_7951|Name=jgi.p|Trimin1|100042|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=660bp|location=Sequence derived from alignment at Contig_94:199404..200948- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. TGGTTGTGGTGGCAGGCCCTACGACAACAAAAATACTTCCTGCGACTGTCback to top protein sequence of jgi.p|Trimin1|100042 >Trimin1|100042|CE100041_32 ID=Trimin1|100042|CE100041_32|Name=jgi.p|Trimin1|100042|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=165bp MAVLLLLPAVRPDAEVNVPRGWRKSDRFYGFRYEVRGLVQDVGFLQAAVHback to top mRNA from alignment at Contig_94:199404..200948- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_7951 ID=mRNA_7951|Name=jgi.p|Trimin1|100042|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1545bp|location=Sequence derived from alignment at Contig_94:199404..200948- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_94:199404..200948- >mRNA_7951 ID=mRNA_7951|Name=jgi.p|Trimin1|100042|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=495bp|location=Sequence derived from alignment at Contig_94:199404..200948- (Tribonema minus UTEX_B_3156 )back to top |