mRNA_7829 (mRNA) Tribonema minus UTEX_B_3156
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Overview
Homology
BLAST of jgi.p|Trimin1|349136 vs. uniprot
Match: A0A835YX50_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YX50_9STRA) HSP 1 Score: 1377 bits (3564), Expect = 0.000e+0 Identity = 1037/1037 (100.00%), Postives = 1037/1037 (100.00%), Query Frame = 1
Query: 1 MSVMAATVLPPNAMMAKQEPDSLHQQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPYTSCAAASGGYEGTLQAAATAAAIADGVYAPXXXXXXXXXXXXGLTDXXXXXXXXXXXXQAIYQPLPVPKTEGYFAPAAMXXXXXXXXXXXXXXXXXXXXXXSRGKKSSGLRRGKWTTEEEAYANRLIHEFKNGLLPLTDGTTLRTFLSKLLNCDPMRISKKFVGSNCIGKQVFRRRQCEIDKLTQEDMERSRNELQDLERQFLERVAQTNKCKGGAPGGLQTPGCPHHRGGCEPFSHGAVDAATKYRQHLHLLCWQHLRRQQHQXXXXXXXXXXXXXXXXXXXXXRRRCWRLHHLLLQRHLWRLTHKATLLXXXXXXXXXXXXXXXXXQXQLRQXXXXXXLPXXXXXXXXXXXXXXXXXXQSLLFWNKRRWGLHHDEIVREDRGHSGVGLGIESLALAAEEADEXXXXXXXXXXXXDSGGAELRAARGLELLGGAAARGAGGLHKTFSWARLTSYEHLDKLANGGEGVHGGVPDKFHHVEGFSTRNISVXXXXXXXXXXXXXXXLVESGDVIHPEDTADEFNVAAPAQHDSAQASVSSAAQHDSEPPRKRPKHASEAAASPGDDEPNLLMGVPTGVLNSIPFSIASSKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSIRGCCSSGSTYKVEADLQQLPQGTQRTQALARFRSQRHMHSIGMAFLNEPMYSTTASFDGLSWQLAVKRAIGVEEQTAGCKLCGKTYTPFLGSAGPPGSRRMDIVLPADAFPVTGYDDPTRHLPLMVDVTCFEAQVASRAAKTAADPKRCCRDQEAAKTTHYSGHYDQNCYKLATLAIGSFGSIGEQGRKLLKAVATEYASRMSVPGRARPKALKGITLARLRSALSAALHMAYSGRVMTHMAESRGGGHMEEDVGEDPEMPFGGGGV 3111
MSVMAATVLPPNAMMAKQEPDSLHQQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPYTSCAAASGGYEGTLQAAATAAAIADGVYAPXXXXXXXXXXXXGLTDXXXXXXXXXXXXQAIYQPLPVPKTEGYFAPAAMXXXXXXXXXXXXXXXXXXXXXXSRGKKSSGLRRGKWTTEEEAYANRLIHEFKNGLLPLTDGTTLRTFLSKLLNCDPMRISKKFVGSNCIGKQVFRRRQCEIDKLTQEDMERSRNELQDLERQFLERVAQTNKCKGGAPGGLQTPGCPHHRGGCEPFSHGAVDAATKYRQHLHLLCWQHLRRQQHQXXXXXXXXXXXXXXXXXXXXXRRRCWRLHHLLLQRHLWRLTHKATLLXXXXXXXXXXXXXXXXXQXQLRQXXXXXXLPXXXXXXXXXXXXXXXXXXQSLLFWNKRRWGLHHDEIVREDRGHSGVGLGIESLALAAEEADEXXXXXXXXXXXXDSGGAELRAARGLELLGGAAARGAGGLHKTFSWARLTSYEHLDKLANGGEGVHGGVPDKFHHVEGFSTRNISVXXXXXXXXXXXXXXXLVESGDVIHPEDTADEFNVAAPAQHDSAQASVSSAAQHDSEPPRKRPKHASEAAASPGDDEPNLLMGVPTGVLNSIPFSIASSKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSIRGCCSSGSTYKVEADLQQLPQGTQRTQALARFRSQRHMHSIGMAFLNEPMYSTTASFDGLSWQLAVKRAIGVEEQTAGCKLCGKTYTPFLGSAGPPGSRRMDIVLPADAFPVTGYDDPTRHLPLMVDVTCFEAQVASRAAKTAADPKRCCRDQEAAKTTHYSGHYDQNCYKLATLAIGSFGSIGEQGRKLLKAVATEYASRMSVPGRARPKALKGITLARLRSALSAALHMAYSGRVMTHMAESRGGGHMEEDVGEDPEMPFGGGGV
Sbjct: 1 MSVMAATVLPPNAMMAKQEPDSLHQQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPYTSCAAASGGYEGTLQAAATAAAIADGVYAPXXXXXXXXXXXXGLTDXXXXXXXXXXXXQAIYQPLPVPKTEGYFAPAAMXXXXXXXXXXXXXXXXXXXXXXSRGKKSSGLRRGKWTTEEEAYANRLIHEFKNGLLPLTDGTTLRTFLSKLLNCDPMRISKKFVGSNCIGKQVFRRRQCEIDKLTQEDMERSRNELQDLERQFLERVAQTNKCKGGAPGGLQTPGCPHHRGGCEPFSHGAVDAATKYRQHLHLLCWQHLRRQQHQXXXXXXXXXXXXXXXXXXXXXRRRCWRLHHLLLQRHLWRLTHKATLLXXXXXXXXXXXXXXXXXQXQLRQXXXXXXLPXXXXXXXXXXXXXXXXXXQSLLFWNKRRWGLHHDEIVREDRGHSGVGLGIESLALAAEEADEXXXXXXXXXXXXDSGGAELRAARGLELLGGAAARGAGGLHKTFSWARLTSYEHLDKLANGGEGVHGGVPDKFHHVEGFSTRNISVXXXXXXXXXXXXXXXLVESGDVIHPEDTADEFNVAAPAQHDSAQASVSSAAQHDSEPPRKRPKHASEAAASPGDDEPNLLMGVPTGVLNSIPFSIASSKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSIRGCCSSGSTYKVEADLQQLPQGTQRTQALARFRSQRHMHSIGMAFLNEPMYSTTASFDGLSWQLAVKRAIGVEEQTAGCKLCGKTYTPFLGSAGPPGSRRMDIVLPADAFPVTGYDDPTRHLPLMVDVTCFEAQVASRAAKTAADPKRCCRDQEAAKTTHYSGHYDQNCYKLATLAIGSFGSIGEQGRKLLKAVATEYASRMSVPGRARPKALKGITLARLRSALSAALHMAYSGRVMTHMAESRGGGHMEEDVGEDPEMPFGGGGV 1037
BLAST of jgi.p|Trimin1|349136 vs. uniprot
Match: A0A836CN17_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CN17_9STRA) HSP 1 Score: 468 bits (1204), Expect = 1.880e-152 Identity = 249/309 (80.58%), Postives = 254/309 (82.20%), Query Frame = 1
Query: 2323 SSGSTYKVEADLQQLPQGTQRTQALARFRSQRHMHSIGMAFLNEPMYSTTASFDGLSWQLAVKRAIGVEEQTAGCKLCGKT----------------------------------------------YTPFLGSAGPPGSRRMDIVLPADAFPVTGYDDPTRHLPLMVDVTCFEAQVASRAAKTAADPKRCCRDQEAAKTTHYSGHYDQNCYKLATLAIGSFGSIGEQGRKLLKAVATEYASRMSVPGRARPKALKGITLARLRSALSAALHMAYSGRVMTHMAESRGGGHMEEDVGEDPEMPFGGGGV 3111
++G KVEADLQQLPQGTQRTQALAR R QRHMHSIGMAFLNEPMYSTTASFDGLSWQLAVKRAIGVEEQTAGCKLCGK+ YTPFLGSAGPPGSRRMDIVLPADAFPVTGYDDPTRHLPLMVDVTCFEAQVASRAAKTAADP+RCCRDQEAAKTTHYSGHYDQNCYKLATLAIGSFGSIGEQGRKLL+AVATEYASRMSVPG ARPKALKGI LARLRSALSAALHMAY GRVMTHMAESRGGGHMEEDVGED EMPFGGGGV
Sbjct: 111 AAGLADKVEADLQQLPQGTQRTQALARLRLQRHMHSIGMAFLNEPMYSTTASFDGLSWQLAVKRAIGVEEQTAGCKLCGKSPGGTLHARLCQAPRVKAHDTIVHNSVKRATQRILRQYLKTGLVDEDYTPFLGSAGPPGSRRMDIVLPADAFPVTGYDDPTRHLPLMVDVTCFEAQVASRAAKTAADPERCCRDQEAAKTTHYSGHYDQNCYKLATLAIGSFGSIGEQGRKLLEAVATEYASRMSVPGGARPKALKGIALARLRSALSAALHMAYCGRVMTHMAESRGGGHMEEDVGEDREMPFGGGGV 419
BLAST of jgi.p|Trimin1|349136 vs. uniprot
Match: A0A836CK17_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CK17_9STRA) HSP 1 Score: 467 bits (1202), Expect = 5.330e-149 Identity = 247/303 (81.52%), Postives = 253/303 (83.50%), Query Frame = 1
Query: 2341 KVEADLQQLPQGTQRTQALARFRSQRHMHSIGMAFLNEPMYSTTASFDGLSWQLAVKRAIGVEEQTAGCKLCGKT----------------------------------------------YTPFLGSAGPPGSRRMDIVLPADAFPVTGYDDPTRHLPLMVDVTCFEAQVASRAAKTAADPKRCCRDQEAAKTTHYSGHYDQNCYKLATLAIGSFGSIGEQGRKLLKAVATEYASRMSVPGRARPKALKGITLARLRSALSAALHMAYSGRVMTHMAESRGGGHMEEDVGEDPEMPFGGGGV 3111
KV+ADLQQLPQGTQRTQALARFRSQRHMHSIGMAFLNEPMYSTTASFDGLSWQLAVK AIGVEEQTAGCKLCGK+ YTPFLGSAGPPGSRRMDIVLPADAFPVTGYDDPTRHLPL+VDVTCFEAQVASRAAKTAADP+RCCRDQEAAKTT+YSGHYDQNCYKLATLAIGSFGSIGEQGRKLL+AVATEYASRMSVPG ARPKALKGI LARLRSALSAALHMAYSGRVMTHMAESRGGGHMEED GEDPEMPFGGGGV
Sbjct: 337 KVKADLQQLPQGTQRTQALARFRSQRHMHSIGMAFLNEPMYSTTASFDGLSWQLAVKSAIGVEEQTAGCKLCGKSPGGTLHARLCQAPRVKAHDTIVHNSVKRATQRILRQYIKTGLVDEDYTPFLGSAGPPGSRRMDIVLPADAFPVTGYDDPTRHLPLIVDVTCFEAQVASRAAKTAADPERCCRDQEAAKTTNYSGHYDQNCYKLATLAIGSFGSIGEQGRKLLEAVATEYASRMSVPGGARPKALKGIALARLRSALSAALHMAYSGRVMTHMAESRGGGHMEEDAGEDPEMPFGGGGV 639
BLAST of jgi.p|Trimin1|349136 vs. uniprot
Match: A0A835Z2F2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2F2_9STRA) HSP 1 Score: 469 bits (1208), Expect = 8.210e-149 Identity = 248/303 (81.85%), Postives = 252/303 (83.17%), Query Frame = 1
Query: 2341 KVEADLQQLPQGTQRTQALARFRSQRHMHSIGMAFLNEPMYSTTASFDGLSWQLAVKRAIGVEEQTAGCKLCGKT----------------------------------------------YTPFLGSAGPPGSRRMDIVLPADAFPVTGYDDPTRHLPLMVDVTCFEAQVASRAAKTAADPKRCCRDQEAAKTTHYSGHYDQNCYKLATLAIGSFGSIGEQGRKLLKAVATEYASRMSVPGRARPKALKGITLARLRSALSAALHMAYSGRVMTHMAESRGGGHMEEDVGEDPEMPFGGGGV 3111
KVEADLQQLPQGTQR QALARFRSQRHMHSIGMAFLNEPMYSTTASFDGLSWQLAVKRAIGVEEQTAGCKLCGK+ YTPFLGSAGPPGSRRMDIVLPADAFPV GYDDPTRHLPLMVDVTCFEAQVASRAAKTAADP+RCCRDQEAAKTTHYSGHYDQNCYKLATLAIGSFG IGEQGRKLL+AVATEYASRMS+PG ARPKALKGI LARLRSALSAALHMAYSGRVMTHMAESRGGGHMEEDVGEDPEMPFGGGGV
Sbjct: 418 KVEADLQQLPQGTQRMQALARFRSQRHMHSIGMAFLNEPMYSTTASFDGLSWQLAVKRAIGVEEQTAGCKLCGKSPGGTLHARLCQAPRVKAHDTIVHKSVKRATQRILRQYLKTGLVDEDYTPFLGSAGPPGSRRMDIVLPADAFPVIGYDDPTRHLPLMVDVTCFEAQVASRAAKTAADPERCCRDQEAAKTTHYSGHYDQNCYKLATLAIGSFGGIGEQGRKLLEAVATEYASRMSLPGGARPKALKGIALARLRSALSAALHMAYSGRVMTHMAESRGGGHMEEDVGEDPEMPFGGGGV 720
BLAST of jgi.p|Trimin1|349136 vs. uniprot
Match: A0A835Z458_9STRA (Uncharacterized protein (Fragment) n=7 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z458_9STRA) HSP 1 Score: 459 bits (1182), Expect = 1.380e-148 Identity = 243/297 (81.82%), Postives = 247/297 (83.16%), Query Frame = 1
Query: 2341 KVEADLQQLPQGTQRTQALARFRSQRHMHSIGMAFLNEPMYSTTASFDGLSWQLAVKRAIGVEEQTAGCKLCGKT----------------------------------------------YTPFLGSAGPPGSRRMDIVLPADAFPVTGYDDPTRHLPLMVDVTCFEAQVASRAAKTAADPKRCCRDQEAAKTTHYSGHYDQNCYKLATLAIGSFGSIGEQGRKLLKAVATEYASRMSVPGRARPKALKGITLARLRSALSAALHMAYSGRVMTHMAESRGGGHMEEDVGEDPEMP 3093
KVEADLQQL QGTQRTQALARFRSQRHMHSIGMAFLNEPMYSTTASFDGLSWQLAVKRAIGVEEQT GCKLCGK+ YTPFLGSAGPPGSRRMDIVLPADAFPVTGYDDPTRHLPLMVDVTCFEAQVASRAAKTAADP+RCCRDQEAAKTTHYSGHYDQNCYKLATLAIGSFGSIGEQGRKLL+AVATEYASRMSVPG ARPKALKGI LARLRSALSAALHMAYSGRVMTHMAESRGGGHME+DVGEDPEMP
Sbjct: 155 KVEADLQQLLQGTQRTQALARFRSQRHMHSIGMAFLNEPMYSTTASFDGLSWQLAVKRAIGVEEQTTGCKLCGKSPGGALHARLCQAPRVKAHDTIVHNSVKRATQRILRQYLKTGLVDEDYTPFLGSAGPPGSRRMDIVLPADAFPVTGYDDPTRHLPLMVDVTCFEAQVASRAAKTAADPERCCRDQEAAKTTHYSGHYDQNCYKLATLAIGSFGSIGEQGRKLLEAVATEYASRMSVPGGARPKALKGIALARLRSALSAALHMAYSGRVMTHMAESRGGGHMEDDVGEDPEMP 451
BLAST of jgi.p|Trimin1|349136 vs. uniprot
Match: A0A835Z7B3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7B3_9STRA) HSP 1 Score: 466 bits (1198), Expect = 1.160e-147 Identity = 243/283 (85.87%), Postives = 248/283 (87.63%), Query Frame = 1
Query: 2341 KVEADLQQLPQGTQRTQALARFRSQRHMHSIGMAFLNEPMYSTTASFDGLSWQLAVKRAIGVEEQTAGCKLCGKT--------------------------YTPFLGSAGPPGSRRMDIVLPADAFPVTGYDDPTRHLPLMVDVTCFEAQVASRAAKTAADPKRCCRDQEAAKTTHYSGHYDQNCYKLATLAIGSFGSIGEQGRKLLKAVATEYASRMSVPGRARPKALKGITLARLRSALSAALHMAYSGRVMTHMAESRGGGHMEEDVGEDPEMPFGGGGV 3111
KVEADLQQLPQGTQRTQALARFRSQRHMHSI MAFLNEPMYST ASFDGLSWQLAVKRAIGVEEQTAGCKLC K+ YTP LGSAGPPGSRRMDIVLPADAFPVTGYDDPTRHLPLMVDVTCFEAQVASRAAKTAADP+RCCRDQEAAK + YSGHYDQNCYKLATLA+GSFGSIGEQGRKLL+AVATEYASRMSVPG ARPKALKGI LARLRSALSAALHMAYSGRVMTHMAESRGGGHMEED GEDPEMPFGGGGV
Sbjct: 413 KVEADLQQLPQGTQRTQALARFRSQRHMHSIAMAFLNEPMYSTAASFDGLSWQLAVKRAIGVEEQTAGCKLCEKSPGGTLHARLCQAPRVKAHDTIVHNSDYTPLLGSAGPPGSRRMDIVLPADAFPVTGYDDPTRHLPLMVDVTCFEAQVASRAAKTAADPERCCRDQEAAKLSQYSGHYDQNCYKLATLALGSFGSIGEQGRKLLEAVATEYASRMSVPGGARPKALKGIALARLRSALSAALHMAYSGRVMTHMAESRGGGHMEEDAGEDPEMPFGGGGV 695
BLAST of jgi.p|Trimin1|349136 vs. uniprot
Match: A0A836C7Z8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7Z8_9STRA) HSP 1 Score: 460 bits (1184), Expect = 1.030e-145 Identity = 245/303 (80.86%), Postives = 249/303 (82.18%), Query Frame = 1
Query: 2341 KVEADLQQLPQGTQRTQALARFRSQRHMHSIGMAFLNEPMYSTTASFDGLSWQLAVKRAIGVEEQTAGCKLCGKT----------------------------------------------YTPFLGSAGPPGSRRMDIVLPADAFPVTGYDDPTRHLPLMVDVTCFEAQVASRAAKTAADPKRCCRDQEAAKTTHYSGHYDQNCYKLATLAIGSFGSIGEQGRKLLKAVATEYASRMSVPGRARPKALKGITLARLRSALSAALHMAYSGRVMTHMAESRGGGHMEEDVGEDPEMPFGGGGV 3111
KVEAD+QQLPQGTQRTQALARF SQRHMHSIGMAFLNEPMYSTTASFDGLSWQLAVKRAIGVEEQTAGCKLCGK+ YTPFLGSAG PG RRMDIVLPADAFPVTGYDDPTRHLPLMVDVTCFEAQVASRAAKTAADP+RCCRDQEAAKTTHYSGHYDQ CYKLATLAIGSFGSIGEQGRKLL+AVATEYASRMSVPG ARPKALKGI LARLRSALSAALHMAYSGRVMTHMAESRGGGHMEED GEDPEMPFGGG V
Sbjct: 384 KVEADVQQLPQGTQRTQALARFWSQRHMHSIGMAFLNEPMYSTTASFDGLSWQLAVKRAIGVEEQTAGCKLCGKSPGGTLHARLCQAPRVKAHDTIVHNSVKRATQRILRQYLKTGLVDEDYTPFLGSAGRPGRRRMDIVLPADAFPVTGYDDPTRHLPLMVDVTCFEAQVASRAAKTAADPERCCRDQEAAKTTHYSGHYDQKCYKLATLAIGSFGSIGEQGRKLLEAVATEYASRMSVPGGARPKALKGIALARLRSALSAALHMAYSGRVMTHMAESRGGGHMEEDEGEDPEMPFGGGAV 686
BLAST of jgi.p|Trimin1|349136 vs. uniprot
Match: A0A835YKY1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKY1_9STRA) HSP 1 Score: 448 bits (1153), Expect = 1.880e-136 Identity = 237/284 (83.45%), Postives = 246/284 (86.62%), Query Frame = 1
Query: 2308 IRGCCSSGSTYKVEADLQQLPQGTQRTQALARFRSQRHMHSIGMAFLNEPMYSTTASFDGLSWQLAVKRAIGVEE----------------QTAGCKLCGKTYTPFLGSAGPPGSRRMDIVLPADAFPVTGYDDPTRHLPLMVDVTCFEAQVASRAAKTAADPKRCCRDQEAAKTTHYSGHYDQNCYKLATLAIGSFGSIGEQGRKLLKAVATEYASRMSVPGRARPKALKGITLARLRSALSAALHMAYSGRVMTHMAESRGGGHMEEDVGEDPEMPFGGGGV 3111
+R SS + KVEADLQQLPQGTQRTQALARFRSQRHMHSIGMAFLNEPM STTASFDGLSWQLAVKRAIG + Q L + YTPFLGSAGPPGSRRMDIVLPADAFPVTGYDDPTRHLPLMVDVTCFEAQVASRAAKTAADP+RCCRDQEAA+ +HYSGHYDQNC+KLATLAIGSFGSIGEQGRKLL+AVATEYASRMSVPG ARPKALKGI LARLRSALSAALHMAYSGRVMTHMAESRGGGHME VGEDPEMPFGGGGV
Sbjct: 819 LRETSSSATPNKVEADLQQLPQGTQRTQALARFRSQRHMHSIGMAFLNEPMCSTTASFDGLSWQLAVKRAIGAHDTIVHNSVKRATQRILRQYLKTGLVDEDYTPFLGSAGPPGSRRMDIVLPADAFPVTGYDDPTRHLPLMVDVTCFEAQVASRAAKTAADPERCCRDQEAARLSHYSGHYDQNCHKLATLAIGSFGSIGEQGRKLLEAVATEYASRMSVPGGARPKALKGIALARLRSALSAALHMAYSGRVMTHMAESRGGGHMEGGVGEDPEMPFGGGGV 1102
BLAST of jgi.p|Trimin1|349136 vs. uniprot
Match: A0A836CGN9_9STRA (Reverse transcriptase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGN9_9STRA) HSP 1 Score: 450 bits (1158), Expect = 4.660e-134 Identity = 242/303 (79.87%), Postives = 245/303 (80.86%), Query Frame = 1
Query: 2341 KVEADLQQLPQGTQRTQALARFRSQRHMHSIGMAFLNEPMYSTTASFDGLSWQLAVKRAIGVEEQTAGCKLCGKT----------------------------------------------YTPFLGSAGPPGSRRMDIVLPADAFPVTGYDDPTRHLPLMVDVTCFEAQVASRAAKTAADPKRCCRDQEAAKTTHYSGHYDQNCYKLATLAIGSFGSIGEQGRKLLKAVATEYASRMSVPGRARPKALKGITLARLRSALSAALHMAYSGRVMTHMAESRGGGHMEEDVGEDPEMPFGGGGV 3111
KVEADLQQLPQGTQRTQALARFRSQRHMHSIGMAFLNEPMYSTTASFDGLSWQLAVKRAIGVEEQTAGCKLCGK+ YTPFLG MDIVLPADAFPVTGYDDPTRHLPLMVDVTCFEAQVASRAAKTAADP+RCCRDQEAAKTTHYSGHYDQNCYKLATLAIGSFGSIGEQGRKLL+AVATEYASRMSVPG ARPKALKGI LARLRSALSAALHMAYSGRVMTHMAESRGGGHMEEDVGEDPEMPFGGGG
Sbjct: 996 KVEADLQQLPQGTQRTQALARFRSQRHMHSIGMAFLNEPMYSTTASFDGLSWQLAVKRAIGVEEQTAGCKLCGKSPGGTLHARLCQAPRVKAHDTIVHNSVKRATQRLLRQYLKTGLVDEDYTPFLG---------MDIVLPADAFPVTGYDDPTRHLPLMVDVTCFEAQVASRAAKTAADPERCCRDQEAAKTTHYSGHYDQNCYKLATLAIGSFGSIGEQGRKLLEAVATEYASRMSVPGGARPKALKGIALARLRSALSAALHMAYSGRVMTHMAESRGGGHMEEDVGEDPEMPFGGGGA 1289
BLAST of jgi.p|Trimin1|349136 vs. uniprot
Match: A0A835Z654_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z654_9STRA) HSP 1 Score: 418 bits (1074), Expect = 8.950e-133 Identity = 228/316 (72.15%), Postives = 235/316 (74.37%), Query Frame = 1
Query: 2302 SSIRGCCSSGSTYKVEADLQQLPQGTQRTQALARFRSQRHMHSIGMAFLNEPMYSTTASFDGLSWQLAVKRAIGVEEQTAGCKLCGKT----------------------------------------------YTPFLGSAGPPGSRRMDIVLPADAFPVTGYDDPTRHLPLMVDVTCFEAQVASRAAKTAADPKRCCRDQEAAKTTHYSGHYDQNCYKLATLAIGSFGSIGEQGRKLLKAVATEYASRMSVPGRARPKALKGITLARLRSALSAALHMAYSGRVMTHMAESRGGGHMEEDVGEDPEMPFGGGGV 3111
S++ ++ KVEADLQQLPQ TQRTQALARFRSQRHMHSIGMAFLNEPMYSTTASFDGLSWQLAVKRAIGVEEQTAGCKLCGK+ YTPFLGSAGPPGSRRMDIVLPADAFPVTGYDDPTRHLPLMVDVTCF+AQVASRAAKTAADP+RCCRDQEAAKTTHYSGHYDQNCYKLATLAIG MSVPG ARPKALKGI LARLRSALSAALHMAYSGRVMTHMAESRGGGHMEEDVGEDPE PFGGGGV
Sbjct: 155 SALADAVATALADKVEADLQQLPQSTQRTQALARFRSQRHMHSIGMAFLNEPMYSTTASFDGLSWQLAVKRAIGVEEQTAGCKLCGKSPGGTLHARLCQAPRVKAHDTIVHNSVKRATQRILRQYLKTGLVDEDYTPFLGSAGPPGSRRMDIVLPADAFPVTGYDDPTRHLPLMVDVTCFKAQVASRAAKTAADPERCCRDQEAAKTTHYSGHYDQNCYKLATLAIG-----------------------MSVPGGARPKALKGIALARLRSALSAALHMAYSGRVMTHMAESRGGGHMEEDVGEDPETPFGGGGV 447 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|349136 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_7829 ID=mRNA_7829|Name=jgi.p|Trimin1|349136|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=3114bp|location=Sequence derived from alignment at Contig_37:276061..287942+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGTCGGTCATGGCGGCCACAGTACTGCCACCCAACGCCATGATGGCCAAback to top protein sequence of jgi.p|Trimin1|349136 >Trimin1|349136|estExt_Genemark1.C_Ctg_370033 ID=Trimin1|349136|estExt_Genemark1.C_Ctg_370033|Name=jgi.p|Trimin1|349136|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=1038bp MSVMAATVLPPNAMMAKQEPDSLHQQQQQALQHQHQVQQQQHQAALQAQQback to top mRNA from alignment at Contig_37:276061..287942+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_7829 ID=mRNA_7829|Name=jgi.p|Trimin1|349136|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=11882bp|location=Sequence derived from alignment at Contig_37:276061..287942+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_37:276061..287942+ >mRNA_7829 ID=mRNA_7829|Name=jgi.p|Trimin1|349136|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=3114bp|location=Sequence derived from alignment at Contig_37:276061..287942+ (Tribonema minus UTEX_B_3156 )back to top |