mRNA_7772 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|349080
Unique Name	mRNA_7772
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|349080 vs. uniprot
Match: A0A835YV62_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YV62_9STRA)

HSP 1 Score: 458 bits (1179), Expect = 2.750e-160
Identity = 257/257 (100.00%), Postives = 257/257 (100.00%), Query Frame = 1

Query:    1 MLDAQEQLTTKDGEVEDLVTGLTSQIEALFPSKSKKRXXXXXXXXXXXXVLEQQPTAKKAKAAARPEAVAQEENASESGPEGFENGPPLADEGSDDLNGKTKNSKLPDIYDYSADRKAVWASITSLKLSAHEKVELKKFRKLALQASMRKQKSTSYVNGQVQKLLYAPECLYKLKDGVLPGTSNNAGTGGTPLSPEAYKAFRKAYSVEHRKQIELRAFTKFQETQLNKLLQEHGYGDVVAARGAGQVASTPSRNWLF 771
            MLDAQEQLTTKDGEVEDLVTGLTSQIEALFPSKSKKRXXXXXXXXXXXXVLEQQPTAKKAKAAARPEAVAQEENASESGPEGFENGPPLADEGSDDLNGKTKNSKLPDIYDYSADRKAVWASITSLKLSAHEKVELKKFRKLALQASMRKQKSTSYVNGQVQKLLYAPECLYKLKDGVLPGTSNNAGTGGTPLSPEAYKAFRKAYSVEHRKQIELRAFTKFQETQLNKLLQEHGYGDVVAARGAGQVASTPSRNWLF
Sbjct:    1 MLDAQEQLTTKDGEVEDLVTGLTSQIEALFPSKSKKRXXXXXXXXXXXXVLEQQPTAKKAKAAARPEAVAQEENASESGPEGFENGPPLADEGSDDLNGKTKNSKLPDIYDYSADRKAVWASITSLKLSAHEKVELKKFRKLALQASMRKQKSTSYVNGQVQKLLYAPECLYKLKDGVLPGTSNNAGTGGTPLSPEAYKAFRKAYSVEHRKQIELRAFTKFQETQLNKLLQEHGYGDVVAARGAGQVASTPSRNWLF 257

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BLAST of jgi.p|Trimin1|349080 vs. uniprot
Match: A0A836CEH1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEH1_9STRA)

HSP 1 Score: 1021 bits (2639), Expect = 0.000e+0
Identity = 588/588 (100.00%), Postives = 588/588 (100.00%), Query Frame = 1

Query:    1 MTFKSAAIFTGNTAETGGAISIKNSTLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFDSKPRPTSSKGTPTSSSALTDTSWAFSGGKRIISNNLSAGRGQGSKXXXXXXXXXPAAFTTIVNRLKRQNPATIRDETALRTSTELLEALPDSEVDVEQGTEPAVKPVMSENCREVVRWATNLQSILDTLQGYFDKHPDSESGVDLEMMIDCEQNMRKLVKLARSHQKSNMLTQFALSRRTQSLIDEVSLLLNQAVQKLQLGLSVKAIGVNLRIDENVSLLLSAALSLELVSTDPELSSSLSSLFSAGDGPVPNMATFADAINEIQVGYINEELGDVLEGEVAEGPNGVFRLQRVHREIRAEPATVADGTPAAQERLHALDHVVVTGVDPGQVLAFSAVTALGQRWRRDSAADFAANPPPEGEGVTAQEVPGADYREWALSVRNEEGEAQRRGANQAYGNALAALAERHTRTGRYQAAIAKMAEKLAPIRLQHRPPGWKRVRSRGLRYPRRRRRHRRWRDTHRRPRRIIFFGACARFPPARRGGVAVIDRDTNARANLGMRGVYATCGVADIIPGYPPADQEEEDDT 1764
            MTFKSAAIFTGNTAETGGAISIKNSTLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFDSKPRPTSSKGTPTSSSALTDTSWAFSGGKRIISNNLSAGRGQGSKXXXXXXXXXPAAFTTIVNRLKRQNPATIRDETALRTSTELLEALPDSEVDVEQGTEPAVKPVMSENCREVVRWATNLQSILDTLQGYFDKHPDSESGVDLEMMIDCEQNMRKLVKLARSHQKSNMLTQFALSRRTQSLIDEVSLLLNQAVQKLQLGLSVKAIGVNLRIDENVSLLLSAALSLELVSTDPELSSSLSSLFSAGDGPVPNMATFADAINEIQVGYINEELGDVLEGEVAEGPNGVFRLQRVHREIRAEPATVADGTPAAQERLHALDHVVVTGVDPGQVLAFSAVTALGQRWRRDSAADFAANPPPEGEGVTAQEVPGADYREWALSVRNEEGEAQRRGANQAYGNALAALAERHTRTGRYQAAIAKMAEKLAPIRLQHRPPGWKRVRSRGLRYPRRRRRHRRWRDTHRRPRRIIFFGACARFPPARRGGVAVIDRDTNARANLGMRGVYATCGVADIIPGYPPADQEEEDDT
Sbjct:    1 MTFKSAAIFTGNTAETGGAISIKNSTLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFDSKPRPTSSKGTPTSSSALTDTSWAFSGGKRIISNNLSAGRGQGSKXXXXXXXXXPAAFTTIVNRLKRQNPATIRDETALRTSTELLEALPDSEVDVEQGTEPAVKPVMSENCREVVRWATNLQSILDTLQGYFDKHPDSESGVDLEMMIDCEQNMRKLVKLARSHQKSNMLTQFALSRRTQSLIDEVSLLLNQAVQKLQLGLSVKAIGVNLRIDENVSLLLSAALSLELVSTDPELSSSLSSLFSAGDGPVPNMATFADAINEIQVGYINEELGDVLEGEVAEGPNGVFRLQRVHREIRAEPATVADGTPAAQERLHALDHVVVTGVDPGQVLAFSAVTALGQRWRRDSAADFAANPPPEGEGVTAQEVPGADYREWALSVRNEEGEAQRRGANQAYGNALAALAERHTRTGRYQAAIAKMAEKLAPIRLQHRPPGWKRVRSRGLRYPRRRRRHRRWRDTHRRPRRIIFFGACARFPPARRGGVAVIDRDTNARANLGMRGVYATCGVADIIPGYPPADQEEEDDT 588

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BLAST of jgi.p|Trimin1|349080 vs. uniprot
Match: A0A835Z954_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z954_9STRA)

HSP 1 Score: 449 bits (1154), Expect = 9.060e-147
Identity = 238/273 (87.18%), Postives = 245/273 (89.74%), Query Frame = 1

Query:  982 VGYINEELGDVLEGEVAEGPNGVFRLQRVHREIRAEPATVADGTPAAQERLHALDHVVVTGVDPGQVLAFSAVTALGQRWRRDSAADFAANPPPEGEGV--TAQEVPGADYREWALSVRNEEGEAQRRGANQAYGNALAALAERHTRTGRYQAAIAKMAEKLAPIRLQHRPPGWKRVRSRGLRYPRRRRRHRRWRDTHRRPRRIIFFGACARFPP-----------ARRGGVAVIDRDTNARANLGMRGVYATCGVADIIPGYPPADQEEEDD 1761
            VGYINEELGDVLEGEVAEGPNGVFRLQRVHREI AEPATVADGTPAAQERLHALDHVVVTGVDPGQVLAFSAVTALGQRWRRDSAADFAANPPPEGEGV  TAQEV GA+YR WA SVRNE+GEAQRRGANQAY +ALAALA+RHTRTGRYQAAIAKMAEKLAPIRLQHRPPG KRVRSRG  YP RRRRHRRWRDTHRRPRRIIFFGAC RFP            A  GGVAVI+RDTNARANLGMRGVYATCGV DIIPGY PADQEEE++
Sbjct:  266 VGYINEELGDVLEGEVAEGPNGVFRLQRVHREIGAEPATVADGTPAAQERLHALDHVVVTGVDPGQVLAFSAVTALGQRWRRDSAADFAANPPPEGEGVGVTAQEVSGAEYRVWAQSVRNEQGEAQRRGANQAYSDALAALADRHTRTGRYQAAIAKMAEKLAPIRLQHRPPGMKRVRSRGREYPWRRRRHRRWRDTHRRPRRIIFFGACTRFPANGRAAIPIKKLAAEGGVAVINRDTNARANLGMRGVYATCGVDDIIPGYVPADQEEEEE 538

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BLAST of jgi.p|Trimin1|349080 vs. uniprot
Match: A0A835YWJ2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWJ2_9STRA)

HSP 1 Score: 443 bits (1139), Expect = 1.120e-137
Identity = 249/362 (68.78%), Postives = 252/362 (69.61%), Query Frame = 1

Query:  979 QVGYINEELGDVLEGEVAEGPNGVFRLQRVHREIRAEPATVADGTPAAQERLHALDHVVVTGVDPGQVLAFSAVTALGQRWRRDSAADFAANPPPEGEGVTAQEVPGADYREWALSVRNEEGEAQRRGANQAYGNALAALAERHTRTGRYQ-------------------------------------AAIAKMAEKLAPIRLQHRPPGWKRVRSRGLRYPRRRRRHRRWRDTHRRPRRIIFFGACARFPP---------------------------------------------------------------ARRGGVAVIDRDTNARANLGMRGVYATCGVADIIPGYPPADQEEEDDT 1764
            QVGYINEELGDVLEGEVAEGPNGVFRLQRVHREI AEPATVADGTPAAQERLHALDHVVVTGVDPGQVLAFSAVTALGQRWRRDSAADFAANPPPEGEGVTAQE+ GADYREWALSVRNEEGE QRRGANQAYGNALAALA+RHTRTG YQ                                     AAIAKMAEKLAP R QHRPPGWKRVRSRGLRYPRRRRRHRRWRDTHRRPRRIIFFGACARFP                                                                A  GGVAVI+RDTNARANLGMRGVYATCGVADIIPGYPPAD EEEDDT
Sbjct:  487 QVGYINEELGDVLEGEVAEGPNGVFRLQRVHREIGAEPATVADGTPAAQERLHALDHVVVTGVDPGQVLAFSAVTALGQRWRRDSAADFAANPPPEGEGVTAQEMSGADYREWALSVRNEEGEVQRRGANQAYGNALAALADRHTRTGHYQVLRAYCTTWGHHADAMWGELLHPARRHQRFSRFRAQQAAIAKMAEKLAPFRRQHRPPGWKRVRSRGLRYPRRRRRHRRWRDTHRRPRRIIFFGACARFPSRGRASIPIKKLVAQLACRCPTLITPEPYSSASCLVCGGPTRGGGDKLRHRNRVCKNEDCALAQAAEGGVAVINRDTNARANLGMRGVYATCGVADIIPGYPPADHEEEDDT 848

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BLAST of jgi.p|Trimin1|349080 vs. uniprot
Match: A0A835Z9D2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9D2_9STRA)

HSP 1 Score: 435 bits (1119), Expect = 1.960e-136
Identity = 245/362 (67.68%), Postives = 250/362 (69.06%), Query Frame = 1

Query:  979 QVGYINEELGDVLEGEVAEGPNGVFRLQRVHREIRAEPATVADGTPAAQERLHALDHVVVTGVDPGQVLAFSAVTALGQRWRRDSAADFAANPPPEGEGVTAQEVPGADYREWALSVRNEEGEAQRRGANQAYGNALAALAERHTRTGRYQ-------------------------------------AAIAKMAEKLAPIRLQHRPPGWKRVRSRGLRYPRRRRRHRRWRDTHRRPRRIIFFGACARFPP---------------------------------------------------------------ARRGGVAVIDRDTNARANLGMRGVYATCGVADIIPGYPPADQEEEDDT 1764
            QVGYINEELGDVLEGEVAEGPNGV RLQRVHREI AEPATVADGTPAAQERLHALDHVVVTGVDPGQVLAFSAVTALGQRWRR++AADFAANPPPEGEGVTAQEVPG DYREWALSVRNEEGEAQRRGANQAY +ALAALA+ HTRTGRYQ                                     AAIAKMAEKLAP R QHRPPGWKRVRSRG  YPRR+RRHRRWRDTHRRPRRIIFFGACARFP                                                                A  GGVAVIDRDTNARANLGMRGVYATCGVADIIPGYPPADQEEEDDT
Sbjct:  457 QVGYINEELGDVLEGEVAEGPNGVSRLQRVHREIGAEPATVADGTPAAQERLHALDHVVVTGVDPGQVLAFSAVTALGQRWRRENAADFAANPPPEGEGVTAQEVPGVDYREWALSVRNEEGEAQRRGANQAYSDALAALADMHTRTGRYQVLRAYCTTWGHHADAMWGELLHPARRHQRFSRFRAQQAAIAKMAEKLAPFRRQHRPPGWKRVRSRGREYPRRKRRHRRWRDTHRRPRRIIFFGACARFPSRGRVSIPIKKLVAQLACRCPTLITPEPYSSASCLVCGGPTRGGGDEFGHRNRVCRNENCALAQAAEGGVAVIDRDTNARANLGMRGVYATCGVADIIPGYPPADQEEEDDT 818

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BLAST of jgi.p|Trimin1|349080 vs. uniprot
Match: A0A835ZEL6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEL6_9STRA)

HSP 1 Score: 424 bits (1090), Expect = 2.740e-134
Identity = 248/413 (60.05%), Postives = 254/413 (61.50%), Query Frame = 1

Query:  982 VGYINEELGDVLEGEVAEGPNGVFRLQRVHREIRAEPATVADGTPAAQERLHALDHVVVTGVDPGQVLAFSAVTALGQRWRRDSAADFAANPPPEGEGVTAQEVPGADYREWALSVRNEEGEAQRRGANQAYGNALAALAERHTRTGRYQA------------------------------------------------------------------------------------------AIAKMAEKLAPIRLQHRPPGWKRVRSRGLRYPRRRRRHRRWRDTHRRPRRIIFFGACARFPP---------------------------------------------------------------ARRGGVAVIDRDTNARANLGMRGVYATCGVADIIPGYPPADQEEEDD 1761
            VGYINEELGDVLEGEVAEGPNGVFRLQRVHREI AEPATVADGTPAAQERLHALDHVVVTGVDPGQ+LAFSAVTALGQRWRRDSAADFAANPPPEGEG+TAQEVPGADYREWALSVRNEEGEAQRRGANQAYG+ALAALA+RHTRTGRYQA                                                                                          AIAKMAEKLAPIRLQHRPPGWKRVRSRG  YPRR+R+HRRWRDTHRRPRRIIFFGACARFP                                                                A  GGVAVIDRDTNARANLGMRGVYATCGVADIIPGYPPADQEEEDD
Sbjct:  391 VGYINEELGDVLEGEVAEGPNGVFRLQRVHREIGAEPATVADGTPAAQERLHALDHVVVTGVDPGQMLAFSAVTALGQRWRRDSAADFAANPPPEGEGITAQEVPGADYREWALSVRNEEGEAQRRGANQAYGDALAALADRHTRTGRYQARIAGHCSSTGPCVVLSQHRGLLHECAYMHALALCCTGSTVRKGPLLSISMHNVLRAYCTTWGHHADAMWGELLHPARRHQRFSRFRAQQAAIAKMAEKLAPIRLQHRPPGWKRVRSRGREYPRRKRKHRRWRDTHRRPRRIIFFGACARFPARGRAAIPIKKLVAQLACRCPTLMTPQPYSSASCLVCGQPTRGGGDEFGHRNRVCRNENCALAQAAEGGVAVIDRDTNARANLGMRGVYATCGVADIIPGYPPADQEEEDD 803

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BLAST of jgi.p|Trimin1|349080 vs. uniprot
Match: A0A835Z8U0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8U0_9STRA)

HSP 1 Score: 410 bits (1055), Expect = 4.240e-129
Identity = 228/324 (70.37%), Postives = 233/324 (71.91%), Query Frame = 1

Query:  982 VGYINEELGDVLEGEVAEGPNGVFRLQRVHREIRAEPATVADGTPAAQERLHALDHVVVTGVDPGQVLAFSAVTALGQRWRRDSAADFAANPPPEGEGVTAQEVPGADYREWALSVRNEEGEAQRRGANQAYGNALAALAERHTRTGRYQAAIAKMAEKLAPIRLQHRPPGWKRVRSRGLRYPRRRRRHRRWRDTHRRPRRIIFFGACARFPPARR---------------------------------------------------------------GGVAVIDRDTNARANLGMRGVYATCGVADIIPGYPPADQEEEDDT 1764
            VGYINEELGDVLEGEVAEGPNGV RLQRVHREI AEPATVADGTPAAQERLHALDHVVVTGVDPGQVLAFSAVTALGQRWRRD+AADFAANPPPEGEGVTAQEV GADYR WA SVRNE+GEAQRRGANQAY +ALAAL +RH RTGRYQ                HRPPGWKRVRSRGL+YPRRRRRHRRWRDTHRRPRRIIFFGACARFP   R                                                               GGVAVIDRDTNARANLGMRGVYATCGVADIIPGY PADQEEEDDT
Sbjct:  501 VGYINEELGDVLEGEVAEGPNGVLRLQRVHREIGAEPATVADGTPAAQERLHALDHVVVTGVDPGQVLAFSAVTALGQRWRRDNAADFAANPPPEGEGVTAQEVSGADYRIWAQSVRNEQGEAQRRGANQAYSDALAALVDRHMRTGRYQ----------------HRPPGWKRVRSRGLQYPRRRRRHRRWRDTHRRPRRIIFFGACARFPAGGRAAIPNKKLVAQLACRCPTLMTPQPYSSASCLVCGGATRGGGDEFGHRNRVCRNENCALAQAAEGGVAVIDRDTNARANLGMRGVYATCGVADIIPGYVPADQEEEDDT 808

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BLAST of jgi.p|Trimin1|349080 vs. uniprot
Match: A0A836CCK8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCK8_9STRA)

HSP 1 Score: 396 bits (1018), Expect = 7.230e-128
Identity = 219/298 (73.49%), Postives = 229/298 (76.85%), Query Frame = 1

Query:  979 QVGYINEELGDVLEGEVAEGPNGVFRLQRVHREIRAEPATVADGTPAAQERLHALDHVVVTGVDPGQVLAFSAVTALGQRWRRDSAADFAANPPPEGEGVTAQEVPGADYREWALSVRNEEGEAQRRGANQAYGNALAALAERHTRTGRYQAAIAKMAEKLAPIRLQHRPPGWKRVRSRGLRYPRRRRRHRRWRDTHRRPRRIIFFGACARFPPARR------------------------------------GGVAVIDRDTNARANLGMRGVYATCGVADIIPGYPPADQEEEDDT 1764
            QVGYINEELGDVLEGEVAEGPNGVFRLQRV REI AEPATVADGT AAQERLHALDHVVVTGVDPGQVLAFSAVTALGQRWRR++AADFAANPPPEGEGVTAQEV GADYR  A SVRNE+GEAQRRGANQAY +ALAALA+RHTRTG YQ  I   A          RPPGWKRVR+ G RYPRR+R+HRRWRDTH RPRRIIFFGACARFP   R                                    GG+AVIDRDTNARANLGMRGV ATCGV DIIPGY PADQEEE+DT
Sbjct:  174 QVGYINEELGDVLEGEVAEGPNGVFRLQRVLREIGAEPATVADGTSAAQERLHALDHVVVTGVDPGQVLAFSAVTALGQRWRRENAADFAANPPPEGEGVTAQEVSGADYRICAQSVRNEQGEAQRRGANQAYSDALAALADRHTRTGCYQTGIRARAA-------ISRPPGWKRVRALGFRYPRRKRKHRRWRDTHSRPRRIIFFGACARFPAGGRAAIPIKKLPTRGGGDEFGHRNRVCRNEDCALAQAAEGGIAVIDRDTNARANLGMRGVCATCGVDDIIPGYVPADQEEEEDT 464

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BLAST of jgi.p|Trimin1|349080 vs. uniprot
Match: A0A835ZFR8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFR8_9STRA)

HSP 1 Score: 398 bits (1023), Expect = 1.900e-124
Identity = 226/343 (65.89%), Postives = 238/343 (69.39%), Query Frame = 1

Query:  979 QVGYINEELGDVLEGEVAEGPNGVFRLQRVHREIRAEPATVADGTPAAQERLHALDHVVVTGVDPGQVLAFSAVTALGQRWRRDSAADFAANPPPEGEGVTAQEVPGADYREWALSVRNEEGEAQRRGANQAYGNALAALAERHTRTGRYQ-------------------------------------AAIAKMAEKLAPIRLQHRPPGWKRVRSRGLRYPRRRRRHRRWRDTHRRPRRIIFFGA--------------------------------------------CARFPPARRGGVAVIDRDTNARANLGMRGVYATCGVADIIPGYPPADQEEEDDT 1764
            QVG+INEELGDVLEGEVAEGPNGVFRLQRVHREI AEPATVADGTPAAQERLHALDH VVTGVDPGQVLAFSAVTALGQRWRR++AADFAANPPPEGEG TAQEV GADYR WA SVRNE+GEAQRRGANQAY +ALAALA+ HTR GRYQ                                     AA+AKMAEKLAP R QHRPPGWKRVRSRG  YP R+RRHRRWRDTHRRPRRII FGA                                            CA    A  G +AVIDRDT+ARAN+GMRGVYATCGVADIIPGY  ADQEEE+DT
Sbjct:  457 QVGFINEELGDVLEGEVAEGPNGVFRLQRVHREIGAEPATVADGTPAAQERLHALDHNVVTGVDPGQVLAFSAVTALGQRWRRENAADFAANPPPEGEGATAQEVSGADYRVWAQSVRNEQGEAQRRGANQAYSDALAALADWHTRAGRYQVLHAYCTTWGHHADAMWGELLHPARRHQRFSRFRAQQAAVAKMAEKLAPFRRQHRPPGWKRVRSRGCEYPHRKRRHRRWRDTHRRPRRIILFGASGMPVSDIEDATAIQSASCLVCGQPTRGGGDEFGHRNRVCRNEDCA-LAQAAEGRIAVIDRDTHARANVGMRGVYATCGVADIIPGYVLADQEEEEDT 798

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BLAST of jgi.p|Trimin1|349080 vs. uniprot
Match: A0A835YYZ2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYZ2_9STRA)

HSP 1 Score: 373 bits (957), Expect = 3.380e-117
Identity = 205/273 (75.09%), Postives = 216/273 (79.12%), Query Frame = 1

Query:  979 QVGYINEELGDVLEGEVAEGPNGVFRLQRVHREIRAEPATVADGTPAAQERLHALDHVVVTGVDPGQVLAFSAVTALGQRWRRDSAADFAANPPPEGEGVTAQEVPGADYREWALSVRNEEGEAQRRGANQAYGNALAALAERHTRTGRYQAAIAKMAEKLAPIRLQHRPPGWKRVRSRGLRYPRRRRRHRRWRDTHRRPRRIIFFGACARFPPARR-----------GGVAVIDRDTNARANLGMRGVYATCGVADIIPGYPPADQEEEDDT 1764
            QVGYINEELGDVL+GEVAEGPNGVFRLQRVHREIRAEPA VADGTPAAQERLHALDHVVVTGVDPGQVLAFSAVTALGQRWRR++AADFAANPPPE +GVTAQEVPGADYR WA SVRNE+GEAQRRGA+QAY NALAALA+RHTRTG YQA                  PGWKRVR+RG RY               RPRRIIFFGACARFP   R           GG AVIDR+TNARANLGMRGVYATCGV DIIPGY PA+QEEE+DT
Sbjct:  330 QVGYINEELGDVLKGEVAEGPNGVFRLQRVHREIRAEPARVADGTPAAQERLHALDHVVVTGVDPGQVLAFSAVTALGQRWRRENAADFAANPPPEDKGVTAQEVPGADYRVWAKSVRNEQGEAQRRGADQAYRNALAALADRHTRTGCYQA------------------PGWKRVRARGRRYXXXXXXXXXXXXXXXRPRRIIFFGACARFPAGGRAAIPIKKLAAEGGGAVIDRETNARANLGMRGVYATCGVDDIIPGYVPAEQEEEEDT 584

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BLAST of jgi.p|Trimin1|349080 vs. uniprot
Match: A0A836CJK5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJK5_9STRA)

HSP 1 Score: 373 bits (957), Expect = 1.160e-114
Identity = 215/334 (64.37%), Postives = 221/334 (66.17%), Query Frame = 1

Query: 1054 RLQRVHREIRAEPATVADGTPAAQERLHALDHVVVTGVDPGQVLAFSAVTALGQRWRRDSAADFAANPPPEGEGVTAQEVPGADYREWALSVRNEEGEAQRRGANQAYGNALAALAERHTRTGRYQ-------------------------------------AAIAKMAEKLAPIRLQHRPPGWKRVRSRGLRYPRRRRRHRRWRDTHRRPRRIIFFGACARFPP---------------------------------------------------------------ARRGGVAVIDRDTNARANLGMRGVYATCGVADIIPGYPPADQEEE 1755
            +LQRVHREI AEPATVADGTPAAQERLHALDHVVVTGVDPGQVLAFSAVTALGQRWRR +AADFAANPPPEGEGVTAQEV GADYR WALSVRNE+GEAQRRGANQAY +ALAALA+RHTRTGRYQ                                     AAIAKMAEKLAPIRLQHRPPGWK VRSRG RYPRRRRRH+RWRDTHRRPRRIIFFGACA FP                                                                A  GGVAVIDRDTNARANLGMRGVYATCGV DIIPGY PADQEEE
Sbjct:  479 QLQRVHREIGAEPATVADGTPAAQERLHALDHVVVTGVDPGQVLAFSAVTALGQRWRRKNAADFAANPPPEGEGVTAQEVSGADYRVWALSVRNEQGEAQRRGANQAYSDALAALADRHTRTGRYQVLRAYCTTWGHHADAMWGELLHPARRHQRFSRFRAQQAAIAKMAEKLAPIRLQHRPPGWKHVRSRGRRYPRRRRRHKRWRDTHRRPRRIIFFGACAHFPSRGRASIPIKKLVAQLACRCPTLMTPQPYSSASCLVCGQPTRGGGDEFGHRNRVCRNQNCALAQAAEGGVAVIDRDTNARANLGMRGVYATCGVDDIIPGYVPADQEEE 812

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|349080 vs. uniprot
BLAST of jgi.p|Trimin1|349080 vs. uniprot

BLAST of jgi.p|Trimin1|349080 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A835YV62_9STRA	2.750e-160	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

BLAST of jgi.p|Trimin1|349080 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A836CEH1_9STRA	0.000e+0	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835Z954_9STRA	9.060e-147	87.18	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835YWJ2_9STRA	1.120e-137	68.78	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835Z9D2_9STRA	1.960e-136	67.68	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835ZEL6_9STRA	2.740e-134	60.05	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835Z8U0_9STRA	4.240e-129	70.37	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A836CCK8_9STRA	7.230e-128	73.49	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835ZFR8_9STRA	1.900e-124	65.89	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835YYZ2_9STRA	3.380e-117	75.09	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A836CJK5_9STRA	1.160e-114	64.37	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_35	contig	Contig_35:815726..818601 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|349080\|estExt_Genemark1.C_Ctg_350088
Hectar predicted targeting category	other localisation
TranscriptId	349402
Track	FilteredModels1
ProteinId	349080

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|349080	gene_7772	Tribonema minus UTEX_B_3156	gene	Contig_35 815726..818601 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|349080	Trimin1\|349080\|estExt_Genemark1.C_Ctg_350088	Tribonema minus UTEX_B_3156	polypeptide	Contig_35 815726..818261 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_7772_1	exon_7772_1	Tribonema minus UTEX_B_3156	exon	Contig_35 815726..815800 +
exon_7772_2	exon_7772_2	Tribonema minus UTEX_B_3156	exon	Contig_35 816000..816053 +
exon_7772_3	exon_7772_3	Tribonema minus UTEX_B_3156	exon	Contig_35 816795..816960 +
exon_7772_4	exon_7772_4	Tribonema minus UTEX_B_3156	exon	Contig_35 817783..818601 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_7772	CDS_7772	Tribonema minus UTEX_B_3156	CDS	Contig_35 815726..815800 +

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR3_7772	UTR3_7772	Tribonema minus UTEX_B_3156	three_prime_UTR	Contig_35 818262..818601 +

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_35:815726..818601+
coding sequence from alignment at Contig_35:815726..818601+

spliced messenger RNA

>mRNA_7772 ID=mRNA_7772|Name=jgi.p|Trimin1|349080|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1114bp|location=Sequence derived from alignment at Contig_35:815726..818601+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGCTGGATGCGCAAGAGCAGCTGACGACGAAGGACGGCGAAGTCGAGGA
TCTGGTCACTGGCCTCACATCGCAGATCGAGGCCTTGTTCCCCAGCAAGT
CCAAAAAGCGGCCACGTCAGGAAGATGAGGAGCAGGAGCAGGAGCAAGTC
CTCGAGCAGCAACCGACCGCCAAGAAGGCCAAAGCTGCGGCCAGACCTGA
GGCTGTGGCACAGGAGGAAAACGCATCTGAATCCGGTCCTGAGGGTTTCG
AGAACGGCCCTCCACTGGCAGACGAGGGGAGCGACGACTTGAACGGCAAG
ACCAAGAACTCCAAGCTTCCTGACATCTACGACTACTCGGCAGATCGGAA
GGCTGTCTGGGCCAGCATCACGTCCCTCAAGCTGAGCGCGCATGAGAAAG
TAGAGTTGAAGAAGTTCCGTAAACTCGCCCTTCAAGCGTCCATGCGTAAG
CAGAAGTCCACTTCATACGTCAATGGTCAGGTTCAAAAGCTCCTGTATGC
GCCGGAGTGCCTGTACAAATTGAAGGATGGCGTATTGCCTGGCACCAGTA
ACAATGCAGGCACCGGGGGGACGCCACTCTCTCCGGAAGCGTACAAGGCT
TTCCGCAAGGCCTACAGTGTCGAGCACCGCAAGCAGATTGAGCTGAGAGC
CTTCACCAAGTTCCAGGAAACGCAGCTGAATAAGCTTCTGCAGGAACATG
GCTACGGTGATGTCGTTGCGGCACGGGGCGCCGGGCAAGTCGCCTCGACT
CCGAGCAGAAATTGGCTCTTCTAAGGAGAAGGAGGTTTTACATCGCGACC
GACTCGGAGGGGGACTGTGATGCCTGACGACGCCGAAGGCATGGTGGTGG
TGTGACAGCAACCGATAGGGGTATGCTGTGACATGGGCATTCTGGGGTCT
TGCACAGTGGCAGTTAAATTAGCTGGCAGTTACGCCTTGGATCGAATTCG
GTACTCAGGGAGGCCCCCGTTGTGAACTGGCCCTTGATGGCGACGTCATC
AGTGTACATAGCCCCTGCACTTAAGGGGAACCTCGCCCCCCTGTTTGAAC
ACTACTGTGTTTTTGATTCACTCTCTCACCCCTGGCATTCAATACAGCAC
CACCTGGTAAGCCA

protein sequence of jgi.p|Trimin1|349080

>Trimin1|349080|estExt_Genemark1.C_Ctg_350088 ID=Trimin1|349080|estExt_Genemark1.C_Ctg_350088|Name=jgi.p|Trimin1|349080|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=258bp
MLDAQEQLTTKDGEVEDLVTGLTSQIEALFPSKSKKRPRQEDEEQEQEQV
LEQQPTAKKAKAAARPEAVAQEENASESGPEGFENGPPLADEGSDDLNGK
TKNSKLPDIYDYSADRKAVWASITSLKLSAHEKVELKKFRKLALQASMRK
QKSTSYVNGQVQKLLYAPECLYKLKDGVLPGTSNNAGTGGTPLSPEAYKA
FRKAYSVEHRKQIELRAFTKFQETQLNKLLQEHGYGDVVAARGAGQVAST
PSRNWLF*

mRNA from alignment at Contig_35:815726..818601+

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_7772 ID=mRNA_7772|Name=jgi.p|Trimin1|349080|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2876bp|location=Sequence derived from alignment at Contig_35:815726..818601+ (Tribonema minus UTEX_B_3156 )
ATGCTGGATGCGCAAGAGCAGCTGACGACGAAGGACGGCGAAGTCGAGGA
TCTGGTCACTGGCCTCACATCGCAGGTCACAGATGGGCTGTCCTGCTGGT
GGCGTCGCATGCTGGCACCATGCCTTTGTACCACTGGCTTGCTGTTGTGC
TGTCGTCGCAATCGCACGCTCAGCGTTTCATGCTTACACCATTGTGTGGC
GTCGCCGTGCGTATCCTCCTTCGTCCACCTCTTCTCACTGACCCCTTTCC
GCACGCGCCGACTCGTTTGCGCAGATCGAGGCCTTGTTCCCCAGCAAGTC
CAAAAAGCGGCCACGTCAGGAAGATGAGGTATTGGATAAGGAGGCAAGTC
TTGCAGCACTTTCTGTTGTACCATCTTCGATTAGCATATGGTTTCTCCGC
CACTCTCCATGCTGCTGCTCATTGCGTGACATTCATGAATGCTACAGCAG
GCGTGATGGCAGCCATCAGCCTGAGCTCTAGCCATAGTCACGACTGTCTT
CGTTGTGCTTGGGGCTCATTTAGTAACTATGAGTTCTTGGCAACACTGTT
TGCTTCTATCCCGTTCGCCGGTCCTCTTTGCCTTTCCTTTTTTGCTCATC
GGCCATACGCATGCCGTGGCAGACACTTGCGGCTTGGTGCTTAGCTACAG
TCAGGTCCGTGGAGATTAGCAGACTGCTTATCAGAAGTTGAGTAGTCATA
CGTTGTGCAAACAGCGCCATGGAAGTGTGAAGTGCATATCAACATCAACT
TCAACAAGCAGATGCGCCAGCAGGTGCCCCTGAGCCGGGGCTACAAAATG
ACATCGCCCAACCTCGACAACACCTGTGCCCTGGTGACTTCACTGCTGAA
TAACAGCCTCGGCAACACGTTGGCATGCAGGTTTGCGTTTGGGCTCAGCG
GATTTGCAGTGCTAATGCTCACGAGCACGTGCCCTGGTGACTTCACTGCT
AAATAACAGGCTCGGTTGCACATGGGCGTCCTGGATTGCGTTCGGGCTGA
ACGGATTCACAGTGCTGATGTTCACAAGCACGCATTCCCGCCATGTTGAA
TCATTATGATGTCGAGCAGGAGCAGGAGCAGGAGCAAGTCCTCGAGCAGC
AACCGACCGCCAAGAAGGCCAAAGCTGCGGCCAGACCTGAGGCTGTGGCA
CAGGAGGAAAACGCATCTGAATCCGGTCCTGAGGGTTTCGAGAACGGCCC
TCCACTGGCAGACGAGGGGAGCGACGACTTGAACGGTGATGAAATCATTC
AGCTCTTGTGTACATATGTGCAGGGTATATTAAGTGTGCCGTGCTGCAGC
AGTGCGCGCAGGCATTACCGATGCAGCGCATCTTGGTACCTGTACGACAC
TGAGTCTATTGCGATAAAACGCAACTGGGGACATGTAATTCAGACTGTGA
ACAACAGCACATGAGCTCAGAAACAGGACCCAGCATCAAACCAGTTTGGC
ACACACAGTCAGTCGTGTGGTCAGCACTATTAGTGGTACCTGCATCTCAA
TTAAGTGAAATTACCAATGCAGAGCTACCATGTTGAACTAAGCCTGCTTG
CACGTAAAATCACCAGTGCACAGCTTACACGTAGCAGCTTTGCTCATCAG
CACCATACTAAGAGTGGCTTACGGTACGCACGCATGGCTGCCTCGTCAGG
TCGAATGAAGCCTGCCTGCACTTGAAGCCACAAGTGCAGACCTCACACGT
AGCAGGCAGCAGCCATGTTCATCAGCACCATGTAGCAGCCAGTAGCCTTG
CTCATCTGCATCAGTCTGTGAGCTTATGGTACACATAAACGCCACCTTGC
ACGTGTCGCGCAAGCATACCATTGGTTCACCAGCATGCGCATACATCACC
ACCATGCATGGCCTTGTGTATCACCGCCGCCATGCATGTTTCGTCACCAG
CATGCAGTGCTGCGTTTATCTCCAGCATGCATTCTTTCAAAGCATTATCA
CCTGCATGCACATTTACCACATGCATATTTTTGCCATCAGGTTGCATGTT
GGACATGACCATGGTGAGCTTCCTTAAACTGACTGCTTGTGCATGAAGGT
GATTCAGGCAAGACCAAGAACTCCAAGCTTCCTGACATCTACGACTACTC
GGCAGATCGGAAGGCTGTCTGGGCCAGCATCACGTCCCTCAAGCTGAGCG
CGCATGAGAAAGTAGAGTTGAAGAAGTTCCGTAAACTCGCCCTTCAAGCG
TCCATGCGTAAGCAGAAGTCCACTTCATACGTCAATGGTCAGGTTCAAAA
GCTCCTGTATGCGCCGGAGTGCCTGTACAAATTGAAGGATGGCGTATTGC
CTGGCACCAGTAACAATGCAGGCACCGGGGGGACGCCACTCTCTCCGGAA
GCGTACAAGGCTTTCCGCAAGGCCTACAGTGTCGAGCACCGCAAGCAGAT
TGAGCTGAGAGCCTTCACCAAGTTCCAGGAAACGCAGCTGAATAAGCTTC
TGCAGGAACATGGCTACGGTGATGTCGTTGCGGCACGGGGCGCCGGGCAA
GTCGCCTCGACTCCGAGCAGAAATTGGCTCTTCTAAGGAGAAGGAGGTTT
TACATCGCGACCGACTCGGAGGGGGACTGTGATGCCTGACGACGCCGAAG
GCATGGTGGTGGTGTGACAGCAACCGATAGGGGTATGCTGTGACATGGGC
ATTCTGGGGTCTTGCACAGTGGCAGTTAAATTAGCTGGCAGTTACGCCTT
GGATCGAATTCGGTACTCAGGGAGGCCCCCGTTGTGAACTGGCCCTTGAT
GGCGACGTCATCAGTGTACATAGCCCCTGCACTTAAGGGGAACCTCGCCC
CCCTGTTTGAACACTACTGTGTTTTTGATTCACTCTCTCACCCCTGGCAT
TCAATACAGCACCACCTGGTAAGCCA

Coding sequence (CDS) from alignment at Contig_35:815726..818601+

>mRNA_7772 ID=mRNA_7772|Name=jgi.p|Trimin1|349080|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=774bp|location=Sequence derived from alignment at Contig_35:815726..818601+ (Tribonema minus UTEX_B_3156 )
ATGCTGGATGCGCAAGAGCAGCTGACGACGAAGGACGGCGAAGTCGAGGA
TCTGGTCACTGGCCTCACATCGCAGATCGAGGCCTTGTTCCCCAGCAAGT
CCAAAAAGCGGCCACGTCAGGAAGATGAGGAGCAGGAGCAGGAGCAAGTC
CTCGAGCAGCAACCGACCGCCAAGAAGGCCAAAGCTGCGGCCAGACCTGA
GGCTGTGGCACAGGAGGAAAACGCATCTGAATCCGGTCCTGAGGGTTTCG
AGAACGGCCCTCCACTGGCAGACGAGGGGAGCGACGACTTGAACGGCAAG
ACCAAGAACTCCAAGCTTCCTGACATCTACGACTACTCGGCAGATCGGAA
GGCTGTCTGGGCCAGCATCACGTCCCTCAAGCTGAGCGCGCATGAGAAAG
TAGAGTTGAAGAAGTTCCGTAAACTCGCCCTTCAAGCGTCCATGCGTAAG
CAGAAGTCCACTTCATACGTCAATGGTCAGGTTCAAAAGCTCCTGTATGC
GCCGGAGTGCCTGTACAAATTGAAGGATGGCGTATTGCCTGGCACCAGTA
ACAATGCAGGCACCGGGGGGACGCCACTCTCTCCGGAAGCGTACAAGGCT
TTCCGCAAGGCCTACAGTGTCGAGCACCGCAAGCAGATTGAGCTGAGAGC
CTTCACCAAGTTCCAGGAAACGCAGCTGAATAAGCTTCTGCAGGAACATG
GCTACGGTGATGTCGTTGCGGCACGGGGCGCCGGGCAAGTCGCCTCGACT
CCGAGCAGAAATTGGCTCTTCTAA