mRNA_7626 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|170651 vs. uniprot
Match: A0A835YKH3_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKH3_9STRA) HSP 1 Score: 718 bits (1853), Expect = 9.240e-261 Identity = 381/381 (100.00%), Postives = 381/381 (100.00%), Query Frame = 1 Query: 1 MDAEEGGSGAARREERRHIPSTPVRTLDAPDLEDDYYLNLISWGGGNVIAVALSQAVYLWNAATGAIHHLLTTPVQGDIVTSVQWATGGGAAQLAVGTAAGAVQLWDAAECRQVRAMGGHTARVGSLSWRDTHTVSSGSRDATIRSHDVRAAARGGXXXAAVYAGHRQEVCGLAWNADGRTLASGGNENFLCLWDAAASGGARAGGVNGAAQPAAQHRPRLTLTEHCAAVKALAWSPQQRHLLASGGGSDDRCIKTWNVANGALLQSVDTESQVCSLLWSTRTRELVSSHGYSQNQLCVWRYPAMQRVKELQGHTARVLHTALSPDGATVVSAAADETLRFWEVFANVPARRGXXXXXXXXXXXXXXRQQALHGLSAMQLR 1143 MDAEEGGSGAARREERRHIPSTPVRTLDAPDLEDDYYLNLISWGGGNVIAVALSQAVYLWNAATGAIHHLLTTPVQGDIVTSVQWATGGGAAQLAVGTAAGAVQLWDAAECRQVRAMGGHTARVGSLSWRDTHTVSSGSRDATIRSHDVRAAARGGXXXAAVYAGHRQEVCGLAWNADGRTLASGGNENFLCLWDAAASGGARAGGVNGAAQPAAQHRPRLTLTEHCAAVKALAWSPQQRHLLASGGGSDDRCIKTWNVANGALLQSVDTESQVCSLLWSTRTRELVSSHGYSQNQLCVWRYPAMQRVKELQGHTARVLHTALSPDGATVVSAAADETLRFWEVFANVPARRGXXXXXXXXXXXXXXRQQALHGLSAMQLR Sbjct: 1 MDAEEGGSGAARREERRHIPSTPVRTLDAPDLEDDYYLNLISWGGGNVIAVALSQAVYLWNAATGAIHHLLTTPVQGDIVTSVQWATGGGAAQLAVGTAAGAVQLWDAAECRQVRAMGGHTARVGSLSWRDTHTVSSGSRDATIRSHDVRAAARGGXXXAAVYAGHRQEVCGLAWNADGRTLASGGNENFLCLWDAAASGGARAGGVNGAAQPAAQHRPRLTLTEHCAAVKALAWSPQQRHLLASGGGSDDRCIKTWNVANGALLQSVDTESQVCSLLWSTRTRELVSSHGYSQNQLCVWRYPAMQRVKELQGHTARVLHTALSPDGATVVSAAADETLRFWEVFANVPARRGXXXXXXXXXXXXXXRQQALHGLSAMQLR 381
BLAST of jgi.p|Trimin1|170651 vs. uniprot
Match: A0A6H5KEB3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEB3_9PHAE) HSP 1 Score: 416 bits (1069), Expect = 1.780e-138 Identity = 215/337 (63.80%), Postives = 248/337 (73.59%), Query Frame = 1 Query: 49 RHIPSTPVRTLDAPDLEDDYYLNLISWGGGNVIAVALSQAVYLWNAATGAIHHLLTTPVQGDIVTSVQWATGGGAAQLAVGTAAGAVQLWDAAECRQVRAMGGHTARVGSLSWRDTHTVSSGSRDATIRSHDVRAAARGGXXXAAVYAGHRQEVCGLAWNADGRTLASGGNENFLCLWDAAASGGARAGGVNGA----AQPAAQHRPRLTLTEHCAAVKALAWSPQQRHLLASGGGSDDRCIKTWNVANGALLQSVDTESQVCSLLWSTRTRELVSSHGYSQNQLCVWRYPAMQRVKELQGHTARVLHTALSPDGATVVSAAADETLRFWEVFANVP 1047 R IPS P+R LDAPDL DDYYLNLISWG NV+AVAL QAVYLWNAATG+I HLLT P D VTSV W G L VGT AVQLWDA++ RQVR M GH+ARVG+L+W+ H +SSGSRD++I HDVR A + GH QEVCGL W+ DG TLASGGNENFLCLWDA+ SG AG + + HRPR TL +H AAVKALAW P QRHLLASGGG+ DR IK WN ANGA+L SVDT SQVCSL WS +ELVSSHG+S+NQLC+W+YP M ++KE +GHT+RVLH SPDG+TVVSAAADETLRFW++F + P Sbjct: 104 RSIPSAPLRILDAPDLVDDYYLNLISWGHNNVLAVALGQAVYLWNAATGSIEHLLTLPDPHDFVTSVAWMGRDGGDFLGVGTNHSAVQLWDASKLRQVRTMSGHSARVGTLAWK-RHVLSSGSRDSSIIQHDVRMP----NHKMATFMGHEQEVCGLKWSPDGNTLASGGNENFLCLWDASMSGRGGAGXXXXXXXXXGRSSLVHRPRRTLVQHQAAVKALAWCPSQRHLLASGGGTADRTIKFWNTANGAMLNSVDTGSQVCSLQWSQHNKELVSSHGFSENQLCLWKYPNMLKIKEFRGHTSRVLHMDTSPDGSTVVSAAADETLRFWDMFGSPP 435
BLAST of jgi.p|Trimin1|170651 vs. uniprot
Match: D7G9G0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9G0_ECTSI) HSP 1 Score: 415 bits (1066), Expect = 3.150e-137 Identity = 216/339 (63.72%), Postives = 248/339 (73.16%), Query Frame = 1 Query: 49 RHIPSTPVRTLDAPDLEDDYYLNLISWGGGNVIAVALSQAVYLWNAATGAIHHLLTTPVQGDIVTSVQWATGGGAAQLAVGTAAGAVQLWDAAECRQVRAMGGHTARVGSLSWRDTHTVSSGSRDATIRSHDVRAAARGGXXXAAVYAGHRQEVCGLAWNADGRTLASGGNENFLCLWDAAASGGARAGGVN------GAAQPAAQHRPRLTLTEHCAAVKALAWSPQQRHLLASGGGSDDRCIKTWNVANGALLQSVDTESQVCSLLWSTRTRELVSSHGYSQNQLCVWRYPAMQRVKELQGHTARVLHTALSPDGATVVSAAADETLRFWEVFANVP 1047 R IPS P+R LDAPDL DDYYLNLISWG NV+AVAL QAVYLWNAATG+I HLLT P D VTSV W G L VGT AVQLWDA++ RQVR M GH+ARVG+L+W+ H +SSGSRD++I HDVR A + GH QEVCGL W+ DG TLASGGNENFLCLWDA+ SG A G + P HRPR TL +H AAVKALAW P QRHLLASGGG+ DR IK WN ANGA+L SVDT SQVCSL WS +ELVSSHG+S+NQLC+W+YP M ++KE +GHT+RVLH SPDG+TVVSAAADETLRFW++F + P Sbjct: 248 RSIPSAPLRILDAPDLVDDYYLNLISWGHNNVLAVALGQAVYLWNAATGSIEHLLTLPNPHDFVTSVAWMGRDGGDFLGVGTNHSAVQLWDASKLRQVRTMSGHSARVGTLAWK-RHVLSSGSRDSSIIQHDVRMP----NHKMATFTGHEQEVCGLKWSPDGNTLASGGNENFLCLWDASMSGRGGAXXXXXXXXXXGRSSPV--HRPRRTLVQHQAAVKALAWCPSQRHLLASGGGTADRTIKFWNTANGAMLNSVDTGSQVCSLQWSRHNKELVSSHGFSENQLCLWKYPNMLKIKEFRGHTSRVLHMDTSPDGSTVVSAAADETLRFWDMFGSPP 579
BLAST of jgi.p|Trimin1|170651 vs. uniprot
Match: A0A5D6XRA5_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XRA5_9STRA) HSP 1 Score: 382 bits (982), Expect = 2.020e-127 Identity = 199/336 (59.23%), Postives = 244/336 (72.62%), Query Frame = 1 Query: 28 AARREERRHIPSTPVRTLDAPDLEDDYYLNLISWGGGNVIAVALSQAVYLWNAATGAIHHLLTTPVQGDIVTSVQWATGGGAAQLAVGTAAGAVQLWDAAECRQVRAMGGHTARVGSLSWRDTHTVSSGSRDATIRSHDVRAAARGGXXXAAVYAGHRQEVCGLAWNADGRTLASGGNENFLCLWDAAASGGARAGGVNGAAQPAAQHRPRLTLTEHCAAVKALAWSPQQRHLLASGGGSDDRCIKTWNVANGALLQSVDTESQVCSLLWSTRTRELVSSHGYSQNQLCVWRYPAMQRVKELQGHTARVLHTALSPDGATVVSAAADETLRFWEVF 1035 AA ++ R++PS PV+ LDAP+L +DYYLNL+SWG N +AVAL Q VYLWNA +G I L+ D V+SVQW+ GG++ LA+GT+ VQLWD A +QVRAMGGH +RVG+L+W ++H +SSGSRD+TI HDVRA A A H QEVCGL W+ DG TLASGGN+N LCLW A+A G PA HR L H AAVKA+AW P +R+LLA+GGG+ DR IK WN NGALL SVDT SQVC+LLWST +E++SSHGYSQN+LC+W+YP+M +VKEL GHT+RVLH A SPDG+TVVS AADETLRFW+VF Sbjct: 91 AAAKKLNRYVPSAPVKVLDAPELMNDYYLNLLSWGSNNTLAVALGQCVYLWNADSGEIDELMALDGD-DYVSSVQWSDVGGSSHLAIGTSESVVQLWDVAAQKQVRAMGGHASRVGALAW-NSHILSSGSRDSTIIHHDVRARTH----QLATLASHEQEVCGLQWSPDGTTLASGGNDNALCLWKASAIGSGGXXXXXXXQSPA--HR----LEHHSAAVKAIAWCPWERNLLATGGGTADRTIKFWNTTNGALLNSVDTGSQVCALLWSTTEKEILSSHGYSQNELCLWKYPSMTKVKELTGHTSRVLHLAASPDGSTVVSGAADETLRFWKVF 414
BLAST of jgi.p|Trimin1|170651 vs. uniprot
Match: A0A7S2PNL3_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PNL3_9STRA) HSP 1 Score: 385 bits (988), Expect = 4.230e-127 Identity = 202/337 (59.94%), Postives = 238/337 (70.62%), Query Frame = 1 Query: 49 RHIPSTPVRTLDAPDLEDDYYLNLISWGGGNVIAVALSQAVYLWNAATGAIHHLLTTPVQGDIVTSVQWA-TGGGAAQLAVGTAAGAVQLWDAAECRQVRAMGGHTARVGSLSWRDTHTVSSGSRDATIRSHDVRAAARGGXXXAAVYAGHRQEVCGLAWNADGRTLASGGNENFLCLWDAAASGGARAGGVNGAAQPAAQHRPRLTLTEHCAAVKALAWSPQQRHLLASGGGSDDRCIKTWNVANGALLQSVDTESQVCSLLWSTRTRELVSSHGYSQNQLCVWRYPAMQRVKELQGHTARVLHTALSPDGATVVSAAADETLRFWEVFANVPARR 1056 R IP+TP R LDAPDL DDYYLNLISW N++AVAL + VYLWNA+ G I HL++ + VTSV W+ T G A LAVGT G VQLWD R +R M GHTARVGSL+W + H +SSG RD+ I HDVR+ + Y GH QEVCGL WN DG LASGGNEN+LCLWDAA SG +R G N PR LT+H AAVKALA+ P RHLLASGGG+ DRCIK WN +GA+L SVDT SQVCSLLWS +E+ SSHG+S+NQL +W YP M +++E GHT+RVLH A SPDGATVVSAAADETLRFW++F + P +R Sbjct: 183 RRIPTTPSRVLDAPDLVDDYYLNLISWSAENILAVALGRCVYLWNASNGDIVHLVSLEGDDNYVTSVSWSDTVGNAHCLAVGTNEGYVQLWDTVGMRLIRTMDGHTARVGSLAW-NQHCLSSGGRDSIIVQHDVRSR----NHSTSTYRGHTQEVCGLKWNEDGSVLASGGNENYLCLWDAAMSGASRNGNRNDN-NSTNSVSPRFILTDHKAAVKALAFCPFNRHLLASGGGTADRCIKFWNTNSGAMLNSVDTGSQVCSLLWSKHNKEICSSHGFSENQLILWNYPTMTKIQEFTGHTSRVLHMAGSPDGATVVSAAADETLRFWDIFGSPPNKR 513
BLAST of jgi.p|Trimin1|170651 vs. uniprot
Match: A0A7S1UIV8_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UIV8_9STRA) HSP 1 Score: 377 bits (967), Expect = 4.690e-126 Identity = 198/334 (59.28%), Postives = 236/334 (70.66%), Query Frame = 1 Query: 49 RHIPSTPVRTLDAPDLEDDYYLNLISWGGGNVIAVALSQAVYLWNAATGAIHHLLTTPVQGDIVTSVQWATGGGAAQLAVGTAAGAVQLWDAAECRQVRAMGGHTARVGSLSWRDTHTVSSGSRDATIRSHDVRAAARGGXXXAAVYAGHRQEVCGLAWNADGRTLASGGNENFLCLWDAAASGGARAGGVNGAAQPAAQHRPRLTLTEHCAAVKALAWSPQQRHLLASGGGSDDRCIKTWNVANGALLQSVDTESQVCSLLWSTRTRELVSSHGYSQNQLCVWRYPAMQRVKELQGHTARVLHTALSPDGATVVSAAADETLRFWEVFANVPA 1050 RHI TP R LDAPDL DDYYLNLI WG NV+AVAL +VYLWNA++ I+HL+ D VTSV W+ G LAVG ++ AV+++DA + + GH ARVGSLSW ++SGSRDA I D+R A R G A GH QEVCGL WNAD +TLASGGNEN+LCLWDA +S AG A H PRL L +H AAVKALAW+P RH+LASGGG+ DR IK WN + GA QSVDT SQVC+LLWS REL SSHG+S++QL +WR+P+MQR+KEL+GHTARVLH ++SPDG TV+SAAADETLRFWE+F PA Sbjct: 43 RHISPTPTRILDAPDLVDDYYLNLIHWGSRNVLAVALGSSVYLWNASSCTINHLVQLEGPSDFVTSVNWSPDG--RSLAVGCSSSAVRIYDAEALSLTQTLRGHVARVGSLSWLGDLGLTSGSRDAAILHRDLRQANRDGVV--ARLEGHTQEVCGLRWNADTQTLASGGNENYLCLWDARSSAQRAAG---------AAHAPRLVLAQHQAAVKALAWAPFSRHVLASGGGTADRSIKIWNASTGACQQSVDTGSQVCALLWSPHARELCSSHGFSEHQLVLWRFPSMQRLKELKGHTARVLHMSVSPDGRTVISAAADETLRFWEIFGAAPA 363
BLAST of jgi.p|Trimin1|170651 vs. uniprot
Match: A0A8J2SNV6_9STRA (Hypothetical protein n=2 Tax=Pelagomonadales TaxID=54409 RepID=A0A8J2SNV6_9STRA) HSP 1 Score: 381 bits (979), Expect = 9.340e-126 Identity = 205/347 (59.08%), Postives = 243/347 (70.03%), Query Frame = 1 Query: 10 EEGGSGAARREERRHIPSTPVRTLDAPDLEDDYYLNLISWGGGNVIAVALSQAVYLWNAATGAIHHLLTTPVQGDIVTSVQWATGGGAAQLAVGTAAGAVQLWDAAECRQVRAMGGHTARVGSLSWRD-THTVSSGSRDATIRSHDVRAAARGGXXXAAVYAGHRQEVCGLAWNADGRTLASGGNENFLCLWDAAASGGARAGGVNGAAQPAAQHRPRLTLTEHCAAVKALAWSPQQRHLLASGGGSDDRCIKTWNVANGALLQSVDTESQVCSLLWSTRTRELVSSHGYSQNQLCVWRYPAMQRVKELQGHTARVLHTALSPDGATVVSAAADETLRFWEVFANVP 1047 +E G+ A R +P+ P R LDAPD+ DDYYLNL+SW NV+AVAL+ VYLWNAAT + LL QGD VTSV WA GG + L VGT + AVQLWDA+ VR+M GHTARVGSL+W + V+SGSRDA + HD RA A GH+QEVCGL+W+ADG TLASGGNEN+LCLWDAA SG AQP+ + PR + +H AAVKAL+W P R+LLASGGG+ DR IK WN GA+L SVDT SQVC+LLWS +E+VSSHG+SQNQLC+WRYP+M ++ EL GHTARVLH A SPDG TVVSAAADETLRFW +F P Sbjct: 176 QEPGNDARTAALARPVPTKPSRILDAPDIVDDYYLNLLSWSSSNVLAVALANNVYLWNAATNEVSELLQLE-QGDCVTSVSWAPGG--SHLCVGTDSAAVQLWDASRMALVRSMRGHTARVGSLAWNPVSRCVNSGSRDALVLQHDARARQH----RTATLVGHQQEVCGLSWSADGATLASGGNENYLCLWDAARSG---------QAQPS-ECAPRAIMRQHQAAVKALSWCPMHRNLLASGGGTADRTIKFWNAHTGAMLHSVDTGSQVCALLWSRHHKEIVSSHGFSQNQLCLWRYPSMTKLCELTGHTARVLHLAQSPDGETVVSAAADETLRFWSIFGGGP 505
BLAST of jgi.p|Trimin1|170651 vs. uniprot
Match: A0A2D4BFE0_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BFE0_PYTIN) HSP 1 Score: 380 bits (977), Expect = 1.710e-125 Identity = 197/333 (59.16%), Postives = 244/333 (73.27%), Query Frame = 1 Query: 49 RHIPSTPVRTLDAPDLEDDYYLNLISWGGGNVIAVALSQAVYLWNAATGAIHHLLTTPVQGD-IVTSVQWATGGGAAQLAVGTAAGAVQLWDAAECRQVRAMGGHTARVGSLSWRDTHTVSSGSRDATIRSHDVRAAARGGXXXAAVYAGHRQEVCGLAWNADGRTLASGGNENFLCLWDAAASG-GARAGGVNGAAQPAAQHRPRLTLTEHCAAVKALAWSPQQRHLLASGGGSDDRCIKTWNVANGALLQSVDTESQVCSLLWSTRTRELVSSHGYSQNQLCVWRYPAMQRVKELQGHTARVLHTALSPDGATVVSAAADETLRFWEVFAN 1041 R++PS P++ LDAP+L +DYYLNL+SWG N++AVAL Q VYLWNA TG I L+T ++GD V+SVQW+ G++ LA+GT+ VQLWD A +QVR+M GH+ARVG+L+W + +SSGSRD+ I HDVRA AV + H QEVCGL W+ DG TLASGGN+N LCLW A+ G G+R H P L H AAVKA+AW P +R+LLA+GGG+ DR IK WN ANGALL SVDT SQVCSLLWST +EL+SSHGYSQN+LC+W+YP+M +VKEL GHT+RVLH A SPDG+TVVS AADETLRFW+VF + Sbjct: 188 RYVPSAPIKVLDAPELMNDYYLNLLSWGSNNILAVALGQCVYLWNAETGDIDELMT--LEGDDYVSSVQWSDVTGSSHLAIGTSDSVVQLWDVAAMKQVRSMNGHSARVGALAW-SNYILSSGSRDSNIIHHDVRARQHN----VAVLSSHEQEVCGLQWSPDGTTLASGGNDNTLCLWKASMIGSGSRT------------HAPAHRLEHHTAAVKAIAWCPWERNLLATGGGTADRTIKFWNTANGALLNSVDTGSQVCSLLWSTTEKELLSSHGYSQNELCLWKYPSMTKVKELTGHTSRVLHLAASPDGSTVVSGAADETLRFWKVFGS 501
BLAST of jgi.p|Trimin1|170651 vs. uniprot
Match: K3X281_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X281_GLOUD) HSP 1 Score: 377 bits (968), Expect = 2.040e-125 Identity = 196/339 (57.82%), Postives = 250/339 (73.75%), Query Frame = 1 Query: 28 AARREERRHIPSTPVRTLDAPDLEDDYYLNLISWGGGNVIAVALSQAVYLWNAATGAIHHLLTTPVQGD-IVTSVQWATGGGAAQLAVGTAAGAVQLWDAAECRQVRAMGGHTARVGSLSWRDTHTVSSGSRDATIRSHDVRAAARGGXXXAAVYAGHRQEVCGLAWNADGRTLASGGNENFLCLWDAAASGGARAGGVNGAAQPAAQHRPRLTLTEHCAAVKALAWSPQQRHLLASGGGSDDRCIKTWNVANGALLQSVDTESQVCSLLWSTRTRELVSSHGYSQNQLCVWRYPAMQRVKELQGHTARVLHTALSPDGATVVSAAADETLRFWEVFAN 1041 AA ++ R++PS P++ LDAP+L +DYYLNL+SWG NV+AVAL Q VYLWNA +G I L+ ++GD V+SVQW+ GG++ LA+GT+ VQLWD A +QVR+M GH++RVG+L+W +++ +SSGSRD+TI HDVRA + H QEVCGL W+ DG TLASGGN+N LCLW A++ G N PA HR L H AAVKA+AW P +R+LLA+GGG+ DR IK WN +NGALL SVDT SQVCSLLWST +E++SSHGYSQN+LC+W+YP+M +VKEL GHT+RVLH A SPDG+TVVS AADETLRFW+VF + Sbjct: 88 AAAKKLNRYVPSAPIKVLDAPELMNDYYLNLLSWGSNNVLAVALGQCVYLWNAESGEIDELMA--LEGDDYVSSVQWSDVGGSSHLAIGTSESVVQLWDVAAQKQVRSMNGHSSRVGALAW-NSYVLSSGSRDSTIIHHDVRARTH----QLSTLTSHEQEVCGLQWSPDGTTLASGGNDNALCLWKASSIGSG-----NSIQSPA--HR----LEHHTAAVKAIAWCPWERNLLATGGGTADRTIKFWNTSNGALLNSVDTGSQVCSLLWSTTEKEILSSHGYSQNELCLWKYPSMTKVKELTGHTSRVLHLAASPDGSTVVSGAADETLRFWKVFGS 408
BLAST of jgi.p|Trimin1|170651 vs. uniprot
Match: A0A8K1CPY5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CPY5_PYTOL) HSP 1 Score: 377 bits (968), Expect = 1.630e-124 Identity = 190/332 (57.23%), Postives = 245/332 (73.80%), Query Frame = 1 Query: 49 RHIPSTPVRTLDAPDLEDDYYLNLISWGGGNVIAVALSQAVYLWNAATGAIHHLLTTPVQGD-IVTSVQWATGGGAAQLAVGTAAGAVQLWDAAECRQVRAMGGHTARVGSLSWRDTHTVSSGSRDATIRSHDVRAAARGGXXXAAVYAGHRQEVCGLAWNADGRTLASGGNENFLCLWDAAASGGARAGGVNGAAQPAAQHRPRLTLTEHCAAVKALAWSPQQRHLLASGGGSDDRCIKTWNVANGALLQSVDTESQVCSLLWSTRTRELVSSHGYSQNQLCVWRYPAMQRVKELQGHTARVLHTALSPDGATVVSAAADETLRFWEVFAN 1041 R++PS P++ LDAP+L +DYYLNL+SWG N++AVAL Q VYLWNA TG I L+T ++GD V+SVQW+ G++ LA+GT+ VQLWD A +QVR+M GH++RVG+L+W + + +SSGSRD++I HDVRA A + H QEVCGL+W+ DG TLASGGN+N LCLW ++ G ++ P L +H AAVKA+AW P +R+LLA+GGG+ DR IK WN +NGALL SVDT SQVCSLLWST +EL+SSHGYSQN+LC+W+YP+M +VKEL GHT+RVLH A SPDG+TVVS AADETLRFW+VF + Sbjct: 162 RYVPSAPIKVLDAPELMNDYYLNLLSWGSNNILAVALGQCVYLWNAETGEIDELMT--LEGDDYVSSVQWSDVSGSSHLAIGTSDSVVQLWDVAASKQVRSMNGHSSRVGALAW-NNYILSSGSRDSSIIHHDVRARQHN----VATLSSHEQEVCGLSWSPDGTTLASGGNDNTLCLWKSSTIG-------------SSTQEPAHRLEQHTAAVKAIAWCPWERNLLATGGGTADRTIKFWNTSNGALLNSVDTGSQVCSLLWSTSEKELLSSHGYSQNELCLWKYPSMAKVKELTGHTSRVLHLAASPDGSTVVSGAADETLRFWKVFGS 473 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|170651 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_7626 ID=mRNA_7626|Name=jgi.p|Trimin1|170651|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1146bp|location=Sequence derived from alignment at Contig_75:292797..295749+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGGACGCGGAGGAGGGCGGCAGCGGCGCCGCGCGGCGCGAGGAACGGCGback to top protein sequence of jgi.p|Trimin1|170651 >Trimin1|170651|e_gw1.75.111.1 ID=Trimin1|170651|e_gw1.75.111.1|Name=jgi.p|Trimin1|170651|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=382bp MDAEEGGSGAARREERRHIPSTPVRTLDAPDLEDDYYLNLISWGGGNVIAback to top mRNA from alignment at Contig_75:292797..295749+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_7626 ID=mRNA_7626|Name=jgi.p|Trimin1|170651|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2953bp|location=Sequence derived from alignment at Contig_75:292797..295749+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_75:292797..295749+ >mRNA_7626 ID=mRNA_7626|Name=jgi.p|Trimin1|170651|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1146bp|location=Sequence derived from alignment at Contig_75:292797..295749+ (Tribonema minus UTEX_B_3156 )back to top |