mRNA_7471 (mRNA) Tribonema minus UTEX_B_3156
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Overview
Homology
BLAST of jgi.p|Trimin1|348416 vs. uniprot
Match: A0A835Z3Z5_9STRA (Mitochondrial carrier domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3Z5_9STRA) HSP 1 Score: 1368 bits (3542), Expect = 0.000e+0 Identity = 846/846 (100.00%), Postives = 846/846 (100.00%), Query Frame = 1
Query: 1 MRLRRSGPLAPARVHCRDCHNHKKSRAATPAELIAAVAEFAALKGELEGGKFNSAQAFAAKDSLAATVTALELYGSAQKRGEYPDAKSRALVDXXXXXXXXXEVAGARGLXXXXXXXXXXXXXXXXXXVDAQKWXXXXXXXXXXXXXDAKKFEASINALAAAAKAGDKAAALRSYGDAAEALSKYLAGAELDPIGSPYYSHGGCAAYRQRRRSKRQAHRGSVLQRRGRRSAMVMQAAPDIKPSVPVGNPALRRRLTLRLDQGDAGDSKANEAELESFKVRVRSVFQDLDQDGDGLVRREEMRAALKLMELPASPEHIXXXXXXXXXXXXXXXXXXXXXATIPSELAPGAYAYAQYALSRHQALTRAFRSLDSNGDGLITQDDIRRALRRLDVHASDGEILKLMQRADLNSDGHICLSEWQEFLLLCTAGSIEKVFDYWAHASAIDIGETLAAPDNFQACAFAGVVSRTATAPMDRLKNRDSVNRXXXXXXXXRKVLLQAGTERGTIMGGLRGIWAEGGWRAFWRGNGANVIKIMPESAIRFMGYDFFKKRISKDPDEVTIIERFIAGALAGCTGQILIYPLEISKTRLAVARSGEFAGIFDCVAKTVATGGWQGLYRGLGTSVLGVIPYAGVDLAIFYTLRSQWMAAHPGSDEARAQGVRGPSLSAALPYMPPPAYTLYLSXXXXXXXXXAPPTGXXXXXXXXXXXXXGRVPARPPAANKYTGMVDCFQQVVRGQGIKGLYRGLGPNFLKALPAIAISYAVYEKSRQGLNRVFNVQRGGGSXXXXXXXXXXXRRVAAALPIACAAXXXXXXXXXXXXXXXXXXSCAVYAKSCQGLNRVFNAQRGGG 2538
MRLRRSGPLAPARVHCRDCHNHKKSRAATPAELIAAVAEFAALKGELEGGKFNSAQAFAAKDSLAATVTALELYGSAQKRGEYPDAKSRALVDXXXXXXXXXEVAGARGLXXXXXXXXXXXXXXXXXXVDAQKWXXXXXXXXXXXXXDAKKFEASINALAAAAKAGDKAAALRSYGDAAEALSKYLAGAELDPIGSPYYSHGGCAAYRQRRRSKRQAHRGSVLQRRGRRSAMVMQAAPDIKPSVPVGNPALRRRLTLRLDQGDAGDSKANEAELESFKVRVRSVFQDLDQDGDGLVRREEMRAALKLMELPASPEHIXXXXXXXXXXXXXXXXXXXXXATIPSELAPGAYAYAQYALSRHQALTRAFRSLDSNGDGLITQDDIRRALRRLDVHASDGEILKLMQRADLNSDGHICLSEWQEFLLLCTAGSIEKVFDYWAHASAIDIGETLAAPDNFQACAFAGVVSRTATAPMDRLKNRDSVNRXXXXXXXXRKVLLQAGTERGTIMGGLRGIWAEGGWRAFWRGNGANVIKIMPESAIRFMGYDFFKKRISKDPDEVTIIERFIAGALAGCTGQILIYPLEISKTRLAVARSGEFAGIFDCVAKTVATGGWQGLYRGLGTSVLGVIPYAGVDLAIFYTLRSQWMAAHPGSDEARAQGVRGPSLSAALPYMPPPAYTLYLSXXXXXXXXXAPPTGXXXXXXXXXXXXXGRVPARPPAANKYTGMVDCFQQVVRGQGIKGLYRGLGPNFLKALPAIAISYAVYEKSRQGLNRVFNVQRGGGSXXXXXXXXXXXRRVAAALPIACAAXXXXXXXXXXXXXXXXXXSCAVYAKSCQGLNRVFNAQRGGG
Sbjct: 1 MRLRRSGPLAPARVHCRDCHNHKKSRAATPAELIAAVAEFAALKGELEGGKFNSAQAFAAKDSLAATVTALELYGSAQKRGEYPDAKSRALVDXXXXXXXXXEVAGARGLXXXXXXXXXXXXXXXXXXVDAQKWXXXXXXXXXXXXXDAKKFEASINALAAAAKAGDKAAALRSYGDAAEALSKYLAGAELDPIGSPYYSHGGCAAYRQRRRSKRQAHRGSVLQRRGRRSAMVMQAAPDIKPSVPVGNPALRRRLTLRLDQGDAGDSKANEAELESFKVRVRSVFQDLDQDGDGLVRREEMRAALKLMELPASPEHIXXXXXXXXXXXXXXXXXXXXXATIPSELAPGAYAYAQYALSRHQALTRAFRSLDSNGDGLITQDDIRRALRRLDVHASDGEILKLMQRADLNSDGHICLSEWQEFLLLCTAGSIEKVFDYWAHASAIDIGETLAAPDNFQACAFAGVVSRTATAPMDRLKNRDSVNRXXXXXXXXRKVLLQAGTERGTIMGGLRGIWAEGGWRAFWRGNGANVIKIMPESAIRFMGYDFFKKRISKDPDEVTIIERFIAGALAGCTGQILIYPLEISKTRLAVARSGEFAGIFDCVAKTVATGGWQGLYRGLGTSVLGVIPYAGVDLAIFYTLRSQWMAAHPGSDEARAQGVRGPSLSAALPYMPPPAYTLYLSXXXXXXXXXAPPTGXXXXXXXXXXXXXGRVPARPPAANKYTGMVDCFQQVVRGQGIKGLYRGLGPNFLKALPAIAISYAVYEKSRQGLNRVFNVQRGGGSXXXXXXXXXXXRRVAAALPIACAAXXXXXXXXXXXXXXXXXXSCAVYAKSCQGLNRVFNAQRGGG 846
BLAST of jgi.p|Trimin1|348416 vs. uniprot
Match: D8LH95_ECTSI (N/a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH95_ECTSI) HSP 1 Score: 378 bits (971), Expect = 6.240e-119 Identity = 223/522 (42.72%), Postives = 302/522 (57.85%), Query Frame = 1
Query: 859 DLDQDGDGL-VRREEMRAALKLMELPASPEHIXXXXXXXXXXXXXXXXXXXXXATIPSELAPGAYAYAQY---ALSRHQA-------------LTRAFRSLDSNGDGLITQDDIRRALRRLDVHASDGEILKLMQRADLNSDGHICLSEWQEFLLLCTAGSIEKVFDYWAHASAIDIGETLAAPDNFQ----------ACAFAGVVSRTATAPMDRLKNRDSVNRXXXXXXXXRKVLLQAGTERGTIMGGLRGIWAEGGWRAFWRGNGANVIKIMPESAIRFMGYDFFKKRISKDPDEVTIIERFIAGALAGCTGQILIYPLEISKTRLAVARSGEFAGIFDCVAKTVATGGWQGLYRGLGTSVLGVIPYAGVDLAIFYTLRSQWMAAHPGSDEARAQGVRGPSLSAALPYMPPPAYTLYLSXXXXXXXXXAPPTGXXXXXXXXXXXXXGRVPARPPAANKYTGMVDCFQQVVRGQGIKGLYRGLGPNFLKALPAIAISYAVYEKSRQGLNRVFNVQRGGGS 2343
DLD++ + R +++ L+ +ELP+ +H+ T+ + G +A++ AL R A L F +LD DG I ++DIRRAL +LD+ ASD +I KLM RADL++DG I E+Q+FLLLC+ S+ +VFDYWAHASAIDIGE ++APDNF+ A A AGVVSRTATAP DRLK LLQ+G +GTI + I+ + GW AFW GNGAN +KIMPESAIRF+GY+ FK I KDPD V + ERF+AG++AG Q++IYPLEI+KTRLAV GEF GI DC+ + V G +GL+RGL S++G++PY+G DLA+FYTL+++WMAA+PG+ E GP + L + + G + P + YT DCF++ ++ +G++GLYRGLGPNFLKALPAIAISYAV+EK+R L+ + + GGGS
Sbjct: 14 DLDEEXXXXELERFKVQTGLQTLELPSKADHVEGLF------------------TVFDKNRDGIIHFAEFEELALHRRHAAHFLRTDGELLAQLADVFENLDHTADGFIRKEDIRRALDKLDIVASDAQITKLMFRADLDNDGKISRKEFQQFLLLCSPASVAEVFDYWAHASAIDIGEDMSAPDNFESQAQAVVTFVAGAIAGVVSRTATAPFDRLKT-----------------LLQSGKTKGTIAKSMSNIYRQEGWLAFWNGNGANTLKIMPESAIRFLGYEIFKNSICKDPDNVRVGERFLAGSMAGSLAQLVIYPLEIAKTRLAVGEKGEFKGIGDCLTRIVRENGMRGLFRGLPASLMGIVPYSGTDLAMFYTLKARWMAANPGAKE-------GPDVMTLLGF-----------------GALSSTCGQLVAYPLQLVRTKLQAQGMPGIPHTYTSTADCFRRTLKHEGVQGLYRGLGPNFLKALPAIAISYAVFEKARTKLSSLVP-KHGGGS 475
BLAST of jgi.p|Trimin1|348416 vs. uniprot
Match: A0A6H5KPJ7_9PHAE (EF-hand domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPJ7_9PHAE) HSP 1 Score: 343 bits (879), Expect = 4.050e-107 Identity = 186/389 (47.81%), Postives = 242/389 (62.21%), Query Frame = 1
Query: 1207 MQRADLNSDGHICLSEWQEFLLLCTAGSIEKVFDYWAHASAIDIGETLAAPDNFQ----------ACAFAGVVSRTATAPMDRLKNRDSVNRXXXXXXXXRKVLLQAGTERGTIMGGLRGIWAEGGWRAFWRGNGANVIKIMPESAIRFMGYDFFKKRISKDPDEVTIIERFIAGALAGCTGQILIYPLEISKTRLAVARSGEFAGIFDCVAKTVATGGWQGLYRGLGTSVLGVIPYAGVDLAIFYTLRSQWMAAHPGSDEARAQGVRGPSLSAALPYMPPPAYTLYLSXXXXXXXXXAPPTGXXXXXXXXXXXXXGRVPARPPAANKYTGMVDCFQQVVRGQGIKGLYRGLGPNFLKALPAIAISYAVYEKSRQGLNRVFNVQRGGGS 2343
M RADL++DG I E+Q+FLLLC+ S+ +VFDYWAHASAIDIGE ++APDNF+ A A AGVVSRTATAP DRLK LLQ+G +GTI + I+ + GW AFW GNGAN +KIMPESAIRF+GY+ FK R+ KDPD V + ERF+AG++AG Q++IYPLEI+KTRLAV GEF GI DC+ + V G +GL+RGL S++G++PY+G DLA+FYTL+++WMAAHPG+ E GP + L + + G + P + YT DCF++ ++ +G++GLYRGLGPNFLKALPAIAISYAV+EK+R L+ + GG S
Sbjct: 1 MFRADLDNDGKISRKEFQQFLLLCSPASVAEVFDYWAHASAIDIGEDMSAPDNFESQAQAVVTFVAGAIAGVVSRTATAPFDRLKT-----------------LLQSGKTKGTIAKSMSNIYRQEGWLAFWNGNGANTLKIMPESAIRFLGYEVFKNRVCKDPDNVRVGERFLAGSMAGSLAQLVIYPLEIAKTRLAVGEKGEFKGIGDCLTRIVRENGMRGLFRGLPASLMGIVPYSGTDLAMFYTLKARWMAAHPGAKE-------GPDVMTLLGF-----------------GALSSTCGQLVAYPLQLVRTKLQAQGMPGIPHTYTSTADCFRRTLKHEGVQGLYRGLGPNFLKALPAIAISYAVFEKARTKLSSLVPKHGGGSS 348
BLAST of jgi.p|Trimin1|348416 vs. uniprot
Match: A0A2R5G3G9_9STRA (Calcium-binding mitochondrial carrier protein SCaMC-1 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G3G9_9STRA) HSP 1 Score: 286 bits (732), Expect = 2.330e-85 Identity = 173/421 (41.09%), Postives = 233/421 (55.34%), Query Frame = 1
Query: 1108 LDSNGDGLITQDDIRRALRRLDVHASDGEILKLMQRADLNSDGHICLSEWQEFLLLCTAGSIEKVFDYWAHASAIDIG--ETLAAPD-----------NFQACAFAGVVSRTATAPMDRLKNRDSVNRXXXXXXXXRKVLLQAGTERG-TIMGGLRGIWAEGGWRAFWRGNGANVIKIMPESAIRFMGYDFFKKRISKDPDEVTIIERFIAGALAGCTGQILIYPLEISKTRLAVARSGEFAGIFDCVAKTVATGGWQGLYRGLGTSVLGVIPYAGVDLAIFYTLRSQWMAAHP------GSDEARAQGVRGPSLSAALPYMPPPAYTLYLSXXXXXXXXXAPPTGXXXXXXXXXXXXXGRVPARPPAANKYTGMVDCFQQVVRGQGIKGLYRGLGPNFLKALPAIAISYAVYEKSRQGLN 2310
+D N DG I ++++R+L L + ASDG+I K+++R + E+++FLLL S+ VFD WA S++D+G E PD NF A AG VSRT TAP+DRLK VL+ G G TI GLR I+ EGG+ AF+RGNG+NV+KI+PESA++F Y+ K I++DPD + I ERFIAGA AG Q LIYPLEI+KTRLAVA+ GE+ GIF C+ +TV G + LYRGLG S+ GV PYAG+DL +F TL+ W+ AHP G+ G ++ A + Y P + P T Y+G +DCF + +R G++GLYRGL PN LK LPA+A SY VYE++R+ L+
Sbjct: 1 MDRNKDGRIVPEELKRSLLDLQLKASDGQIDKIVRRMSRVDTSDVRFGEFRKFLLLLPGNSLRHVFDSWAKDSSVDVGLGEDFGVPDEVEGGKPAYLVNFIAGGVAGAVSRTLTAPLDRLK-----------------VLMMTGNVSGRTITQGLRSIYKEGGFVAFYRGNGSNVVKIIPESAMKFFTYERLKNEIAEDPDNIRIRERFIAGAGAGIVSQTLIYPLEIAKTRLAVAKKGEYRGIFHCLNRTVRYEGVRALYRGLGASLAGVAPYAGIDLMVFMTLKESWIRAHPHEVDGPGALTLLLFGATSSTIGATVAY---PLQLIRTKLQAQGMNASMPVT--------------------------YSGPLDCFHKTIRDNGVRGLYRGLLPNLLKTLPAVATSYLVYEETRKALS 375
BLAST of jgi.p|Trimin1|348416 vs. uniprot
Match: A0A7S2WI82_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2WI82_9STRA) HSP 1 Score: 280 bits (717), Expect = 4.630e-82 Identity = 178/512 (34.77%), Postives = 263/512 (51.37%), Query Frame = 1
Query: 841 VRSVFQDLDQDGDGLVRREEMRAALKLMELPASPEHIXXXXXXXXXXXXXXXXXXXXXATIPSELAPGAYAYAQYALSRHQALTRAFRSLDSNGDGLITQDDIRRALRRLDVHASDGEILKLMQRADLNSDGHICLSEWQEFLLLCTAGSIEKVFDYWAHASAIDIGE-TLAAPD-----------NFQACAFAGVVSRTATAPMDRLKNRDSVNRXXXXXXXXRKVLLQAGTE----RGTIMGGLRGIWAEGGWRAFWRGNGANVIKIMPESAIRFMGYDFFKKRISKDPDEVTIIERFIAGALAGCTGQILIYPLEISKTRLAVARSGEFAGIFDCVAKTVATGGWQGLYRGLGTSVLGVIPYAGVDLAIFYTLRSQWMAAHPGSD------EARAQGVRGPSLSAALPYMPPPAYTLYLSXXXXXXXXXAPPTGXXXXXXXXXXXXXGRVPARPPAANKYTGMVDCFQQVVRGQGIKGLYRGLGPNFLKALPAIAISYAVYEKSRQGLN 2310
V +F++LD++ D + R E+ + + LP +P HI A + + Y R L R F +D N DG + +I+ A+ L + D ++ L+ + N + + E+++FLLL + S+ +FD WA +++ID+G+ PD NF + AG VSRT TAPMDR+K L+QAG++ + +I L+ I+ +GG RAF+RGNG+NVIKIMPESAI+F+ YD K+ + + D + + ERF+AGA AG Q +IYPLEI+KTRLAV+ GEF+GIFDC+ K + G +YRGLG S+LG+ P+AG+DL+IF TL+ W++ HPG+ E G A Y L L +P KY GM+DCF+++V G++GLYRGL PN LKALP+++ISY VYE +++ L+
Sbjct: 12 VEDLFKELDKNRDNFLDRTEVTKGFQKLHLPCTP-HILDELFER--------------ADFNQDGRVSLEEFGSYVKERVLELRRTFDQIDKNRDGRLDSGEIKYAIEGLGLDVRDQDVDMLIGKITKNENDELGFDEFRDFLLLLPSNSLRIIFDNWAKSASIDLGDGDFTIPDDIKGGKPEYLVNFLSGGAAGAVSRTMTAPMDRVKT-----------------LMQAGSDATKGKISIFQALKNIYRDGGVRAFFRGNGSNVIKIMPESAIKFVAYDQLKQMVVAEQDNIQLHERFLAGAGAGVLAQTVIYPLEIAKTRLAVSAKGEFSGIFDCLHKIIKKDGPFAIYRGLGPSILGIAPFAGIDLSIFNTLKHYWISTHPGATDGPGNIELLCMGATSSCTGAVA------TYPLQL-----------------VRTRLQTQGMNSNMPV------KYNGMLDCFRRIVSTDGVRGLYRGLAPNLLKALPSVSISYVVYENTKKVLS 462
BLAST of jgi.p|Trimin1|348416 vs. uniprot
Match: A0A0L0D8V1_THETB (Solute carrier family protein n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0D8V1_THETB) HSP 1 Score: 277 bits (709), Expect = 8.070e-81 Identity = 167/503 (33.20%), Postives = 256/503 (50.89%), Query Frame = 1
Query: 841 VRSVFQDLDQDGDGLVRREEMRAALKLMELPASPEHIXXXXXXXXXXXXXXXXXXXXXATIPSELAPGAYAYAQY---ALSRHQALTRAFRSLDSNGDGLITQDDIRRALRRLDVHASDGEILKLMQRADLNSDGHICLSEWQEFLLLCTAGSIEKVFDYWAHASAIDIGETLAAPDNFQAC-----------AFAGVVSRTATAPMDRLKNRDSVNRXXXXXXXXRKVLLQAGTERGTIMGG-----LRGIWAEGGWRAFWRGNGANVIKIMPESAIRFMGYDFFKKRISKDPDEVTIIERFIAGALAGCTGQILIYPLEISKTRLAVARSGEFAGIFDCVAKTVATGGWQGLYRGLGTSVLGVIPYAGVDLAIFYTLRSQWMAAHPGSDEARAQGVRGPSLSAALPYMPPPAYTLYLSXXXXXXXXXAPPTGXXXXXXXXXXXXXGRVPARPPAANKYTGMVDCFQQVVRGQGIKGLYRGLGPNFLKALPAIAISYAVYEK 2292
+R+ F+ LD DG+G + R+E ++ + +P + + + G +YA++ A R A+ F LD++ G + ++RR L L + ASD +I L++R D N DG I E+++FL++ A ++ F+YWA ++AIDIGE+L+ PD+ A A AG VSRTATAP DR+K V+LQAG+ G GG + I+AEGG RA+WRGNG NV+K+ PE+A RF + K ++ DP +++ ERF +GALAG + IYP+E++KTRLA+++ G + GI DC+AKT G G+Y GLG S++GV+PY G+D + L+ + S+ A + LS+ + AY ++ + P KY+GM+DC +++ G+ GLYRGLG N LK P+ A+S+ VYE+
Sbjct: 20 IRAAFERLDTDGNGSLDRKEFAVGMRSLGIPVTDRAVDEVFNSADAN------------------SDGVISYAEFVAFAARRTAAMAAVFDQLDTDDSGALDVAELRRGLESLGLKASDADISALLERMDANHDGRITFDEFRDFLMMLPASNVRACFEYWAKSAAIDIGESLSMPDDLDALPRPPWKTLVAGACAGAVSRTATAPADRIK-----------------VMLQAGSAGGVPPGGGIRATMTAIYAEGGLRAYWRGNGVNVLKVGPETAARFFFFSQIKALVASDPRNISVAERFTSGALAGVASTVAIYPMEVAKTRLAISKPGSYTGIIDCLAKTFRASGISGVYAGLGPSLVGVVPYVGIDFVTYSYLKELYATRFHDSEPGAAVVLACGMLSSTAGQIA--AYPAQVTRTRL------------------------QAQGMPGVDAKYSGMLDCGRKIAARHGVTGLYRGLGANLLKGTPSAALSWFVYEQ 461
BLAST of jgi.p|Trimin1|348416 vs. uniprot
Match: UPI001E1D98D3 (calcium-binding mitochondrial carrier protein SCaMC-1 n=1 Tax=Echinops telfairi TaxID=9371 RepID=UPI001E1D98D3) HSP 1 Score: 261 bits (666), Expect = 1.520e-74 Identity = 163/509 (32.02%), Postives = 259/509 (50.88%), Query Frame = 1
Query: 823 ESFKVRVRSVFQDLDQDGDGLVRREEMRAALKLMELPASPEHIXXXXXXXXXXXXXXXXXXXXXATIPSELAPGAYAYAQYALSRHQALTRAFRSLDSNGDGLITQDDIRRALRRLDVHASDGEILKLMQRADLNSDGHICLSEWQEFLLLCTAGSIEKVFDYWAHASAIDIGETLAAPDNFQ--------------ACAFAGVVSRTATAPMDRLKNRDSVNRXXXXXXXXRKVLLQAGTERGTIMGGLRGIWAEGGWRAFWRGNGANVIKIMPESAIRFMGYDFFKKRISKDPDEVTIIERFIAGALAGCTGQILIYPLEISKTRLAVARSGEFAGIFDCVAKTVATGGWQGLYRGLGTSVLGVIPYAGVDLAIFYTLRSQWMAAHPGSDEARAQGVRGPSLSAALPYMPPPAYTLYLSXXXXXXXXXAPPTGXXXXXXXXXXXXXGRVPARPPAANKYTGMVDCFQQVVRGQGIKGLYRGLGPNFLKALPAIAISYAVYEKSRQGL 2307
E R +S+FQ LD++ DG+V E++ L+ + +P + + + + +Y + + AF+SLD N DG I +I ++L+ L V S+ + ++Q D + + +EW+++ L A IE++ +W H++ IDIG++LA PD F A AG VSRT+TAP+DRLK V+ + +++ ++GG R + EGG R+ WRGNG NVIKI PE+A++F Y+ +KK ++++ +V +ERF++G+LAG T Q IYP+E+ KTRLAVA++G+++GIFDC K + G LY+G ++LG+IPYAG+DLA++ L+S W+ E A+ P + L + G + A A + MV F++++ +G +GLYRG+ PNF+K LPA+ ISY VYEK +Q L
Sbjct: 18 EQQPTRYQSLFQQLDRNRDGVVDIGELQQGLRSLGVPLGQD---------------AEEKIFNAGDVNKDGMLDFEEFMKYLKDHEKQMKLAFKSLDKNNDGNIDASEIVQSLQTLGVTISEKQAELILQSIDADGTMTVDWNEWRDYFLFNPANDIEEIIRFWKHSTGIDIGDSLAIPDEFTEDEKLSGQWWRQLLAGGVAGAVSRTSTAPLDRLKIMMQVH--------------GSKSDKMNLVGGFRQMVKEGGIRSLWRGNGTNVIKIAPETAVKFWAYEQYKKLLTEEGHKVGTLERFLSGSLAGATAQTFIYPMEVFKTRLAVAKTGQYSGIFDCAKKILKHEGMGALYKGYIPNLLGIIPYAGIDLAVYELLKSYWL-------EHFAEDTVNPGVVVLL-----------------GCGALSSTCGQLASYPLALVRTRMQAQAMVDGAPQLN-MVGLFRRIISKEGARGLYRGITPNFMKVLPAVGISYVVYEKMKQTL 472
BLAST of jgi.p|Trimin1|348416 vs. uniprot
Match: A0A669C380_ORENI (Uncharacterized protein n=6 Tax=Oreochromis TaxID=8139 RepID=A0A669C380_ORENI) HSP 1 Score: 255 bits (651), Expect = 6.960e-73 Identity = 145/435 (33.33%), Postives = 231/435 (53.10%), Query Frame = 1
Query: 1054 YAQYALSRHQALTRAFRSLDSNGDGLITQDDIRRALRRLDVHASDGEILKLMQRADLNSDGHICLSEWQEFLLLCTAGSIEKVFDYWAHASAIDIGETLAAPDNFQ--------------ACAFAGVVSRTATAPMDRLKNRDSVNRXXXXXXXXRKVLLQAGTERG---TIMGGLRGIWAEGGWRAFWRGNGANVIKIMPESAIRFMGYDFFKKRISKDPDEVTIIERFIAGALAGCTGQILIYPLEISKTRLAVARSGEFAGIFDCVAKTVATGGWQGLYRGLGTSVLGVIPYAGVDLAIFYTLRSQWMAAHPGSDEARAQGVRGPSLSAALPYMPPPAYTLYLSXXXXXXXXXAPPTGXXXXXXXXXXXXXGRVPARPPAANKYTGMVDCFQQVVRGQGIKGLYRGLGPNFLKALPAIAISYAVYEKSRQGL 2307
+ +Y + L F+SLD N DG I +I+++L L + S + LK++Q D++ + +EW+E LLC A ++E++ YW H+S +DIG+++A PD F A A AG VSRT TAP+DR+K V +Q + + +++GG + + EGG + WRGNG NV+KI PE+AI+FM Y+ +K+ +S + ++ +RF+AG+LAG T Q IYP+E+ KTRL + ++G++AG+FDC K + G + Y+G ++LG++PYAG+DLA++ TL++ W+A H +D A P + L + P+ P+ M +++V G+ GLYRG+ PNF+K +PA++ISY VYE + GL
Sbjct: 40 FTKYLKEHEKKLWLTFKSLDKNDDGRIDSSEIQQSLAELGIDVSREDTLKILQSMDIDGTMMVDWNEWREHFLLCPAHNLEEIIRYWKHSSVLDIGDSIAIPDEFTEEEKSTGGWWKQLVAGAVAGAVSRTGTAPLDRVK-----------------VFMQVHSSKANQISLLGGFKQMIVEGGVTSLWRGNGINVLKIAPETAIKFMAYEQYKRLLSSEGAKIETHQRFLAGSLAGATAQTAIYPMEVLKTRLTLRKTGQYAGMFDCAKKILRKEGVKAFYKGYVPNLLGILPYAGIDLAVYETLKNTWLA-HYATDSAN------------------PGVLVLLGCGTISSTCGQLASYPLALVRTRMQAQASLEPSNQPS------MSSLMKKIVAKDGVFGLYRGILPNFMKVIPAVSISYVVYEYMKSGL 432
BLAST of jgi.p|Trimin1|348416 vs. uniprot
Match: K1QR48_CRAGI (Calcium-binding mitochondrial carrier protein SCaMC-2 n=6 Tax=Crassostrea TaxID=6564 RepID=K1QR48_CRAGI) HSP 1 Score: 256 bits (653), Expect = 7.760e-73 Identity = 177/508 (34.84%), Postives = 267/508 (52.56%), Query Frame = 1
Query: 838 RVRSVFQDLDQDGDGLVRREEMRAALKLMELPASPEHIXXXXXXXXXXXXXXXXXXXXXATIPSELAPGAYAYAQYALSRHQALTRAFRSLDSNGDGLITQDDIRRALRRLDVHASDGEILKLMQRADLNSDGHICLSEWQEFLLLCTAGSIEKVFDYWAHASAIDIGETLAAPDNF--------------QACAFAGVVSRTATAPMDRLKNRDSVNRXXXXXXXXRKVLLQA-GTERGT--IMGGLRGIWAEGGWRAFWRGNGANVIKIMPESAIRFMGYDFFKKRISKDPD-EVTIIERFIAGALAGCTGQILIYPLEISKTRLAVARSGEFAGIFDCVAKTVATGGWQGLYRGLGTSVLGVIPYAGVDLAIFYTLRSQWMAAHPGSDEARAQGVRGPSLSAALPYMPPPAYTLYLSXXXXXXXXXAPPTGXXXXXXXXXXXXXGRVPARPPAANKYTGMVDCFQQVVRGQGIKGLYRGLGPNFLKALPAIAISYAVYEKSRQGL 2307
+++ +F LD + DG + ++ AL +++P +P H XXXXXXXXXXXXX + +Y + L F+ +D+N DG I +++I + +RL V E KL+ + D ++ I SEW+++LLL + +I+++ +W HAS ID+GE + PD+F A A AG VSR+ TAP+DR+K V+LQ GT + ++ G + + EGG ++ WRGNG NVIKI PESAI+FM Y+ +KK I D E+ + ER +AG+LAG T Q +IYP+E+ KTRLA+ ++G++ GI DC K G YRG ++LG+IPYAG+DLA++ T++ +M + D + ++S + +Y L L R + A K MV FQ++++ G+ GLYRG+ PNF+K +PA+ ISY VYEKSR L
Sbjct: 16 KLKELFNKLDINKDGRIDINDLTQALSTLQVPQTPGHAKKFXXXXXXXXXXXXXFAE---------------FVKYVTDHERKLRLYFKKIDTNDDGSIDKEEIIESFKRLGVAIDPNEADKLLSKMDKDNTLKIEWSEWRDYLLLSPSQNIDEILQHWRHASMIDVGENIIIPDDFTEKEMKMGIWKINLMAGAMAGAVSRSCTAPLDRIK-----------------VMLQVHGTSKNKYGVINGFKHMLEEGGVKSLWRGNGVNVIKIAPESAIKFMAYEQYKKMIHGDTKGELLVWERLLAGSLAGATAQTIIYPMEVLKTRLAIRKTGQYKGILDCAMKIYKHEGASVFYRGYVPNLLGIIPYAGIDLAVYETMKKLYMKTYENKDPGIFVLLGCGTISCTAGQLA--SYPLALV----------------------------RTKLQAQGA-KADSMVGLFQKIIKQDGLTGLYRGIVPNFMKVVPAVGISYVVYEKSRNAL 460
BLAST of jgi.p|Trimin1|348416 vs. uniprot
Match: SCMC1_MOUSE (Calcium-binding mitochondrial carrier protein SCaMC-1 n=34 Tax=Tetrapoda TaxID=32523 RepID=SCMC1_MOUSE) HSP 1 Score: 256 bits (653), Expect = 1.040e-72 Identity = 159/512 (31.05%), Postives = 254/512 (49.61%), Query Frame = 1
Query: 835 VRVRSVFQDLDQDGDGLVRREEMRAALKLMELPASPEHIXXXXXXXXXXXXXXXXXXXXXATIPSELAPGAYAYAQYALSRHQALTRAFRSLDSNGDGLITQDDIRRALRRLDVHASDGEILKLMQRADLNSDGHICLSEWQEFLLLCTAGSIEKVFDYWAHASAIDIGETLAAPDNFQ--------------ACAFAGVVSRTATAPMDRLKNRDSVNRXXXXXXXXRKVLLQA-GTERGTIMGGLRGIWAEGGWRAFWRGNGANVIKIMPESAIRFMGYDFFKKRISKDPDEVTIIERFIAGALAGCTGQILIYPLEISKTRLAVARSGEFAGIFDCVAKTVATGGWQGLYRGLGTSVLGVIPYAGVDLAIFYTLRSQWM------AAHPGSDEARAQGVRGPSLSAALPYMPPPAYTLYLSXXXXXXXXXAPPTGXXXXXXXXXXXXXGRVPARPPAANKYTGMVDCFQQVVRGQGIKGLYRGLGPNFLKALPAIAISYAVYEKSRQGL 2307
R ++F+ LD++GDG+V E++ L+ + +P + + + + +Y + + AF+SLD N DG I +I ++L+ L +H S+ + ++Q D + + +EW+++ L IE++ +W H++ IDIG++L PD F A AG VSRT+TAP+DRLK V++Q G++ I GG R + EGG R+ WRGNG NVIKI PE+A++F Y+ +KK ++++ ++ ERFI+G++AG T Q IYP+E+ KTRLAVA++G+++GI+ C K + G+ Y+G ++LG+IPYAG+DLA++ L+S W+ + +PG + G + Y P + AP MV FQ++V +G+ GLYRG+ PNF+K LPA+ ISY VYE +Q L
Sbjct: 22 TRYETLFRALDRNGDGVVDIGELQQGLQSLGIPLGQD---------------AEEKIFTTGDVNKDGKLDFEEFMKYLKDHEKKMKLAFKSLDKNNDGKIEPSEIVQSLQMLGLHISEKQAELILQSIDSDGTMTVDWNEWRDYFLFNPVTDIEEIIRFWKHSTGIDIGDSLTIPDEFTEDEKKSGQWWRQLLAGGVAGAVSRTSTAPLDRLK-----------------VMMQVHGSKSMNIFGGFRQMVKEGGIRSLWRGNGTNVIKIAPETAVKFWAYEQYKKLLTEEGQKLGTFERFISGSMAGATAQTFIYPMEVLKTRLAVAKTGQYSGIYGCAKKILKHEGFGAFYKGYIPNLLGIIPYAGIDLAVYELLKSYWLDNFAKDSVNPGVMVLLSCGALSSTCGQLASY---PLALVRTRMQAQATVEGAPQLS----------------------------MVGLFQRIVSKEGVSGLYRGITPNFMKVLPAVGISYVVYENMKQTL 470 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|348416 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_7471 ID=mRNA_7471|Name=jgi.p|Trimin1|348416|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2541bp|location=Sequence derived from alignment at Contig_24:127946..145481- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGCGCCTGCGCCGCTCAGGGCCGCTCGCGCCTGCACGCGTGCACTGCCGback to top protein sequence of jgi.p|Trimin1|348416 >Trimin1|348416|estExt_Genemark1.C_Ctg_240012 ID=Trimin1|348416|estExt_Genemark1.C_Ctg_240012|Name=jgi.p|Trimin1|348416|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=847bp MRLRRSGPLAPARVHCRDCHNHKKSRAATPAELIAAVAEFAALKGELEGGback to top mRNA from alignment at Contig_24:127946..145481- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_7471 ID=mRNA_7471|Name=jgi.p|Trimin1|348416|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=17536bp|location=Sequence derived from alignment at Contig_24:127946..145481- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_24:127946..145481- >mRNA_7471 ID=mRNA_7471|Name=jgi.p|Trimin1|348416|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=2541bp|location=Sequence derived from alignment at Contig_24:127946..145481- (Tribonema minus UTEX_B_3156 )back to top |