mRNA_7342 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|168119
Unique NamemRNA_7342
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
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BLAST of jgi.p|Trimin1|168119 vs. uniprot
Match: A0A836CCI3_9STRA (Tubulin-tyrosine ligase family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCI3_9STRA)

HSP 1 Score: 1243 bits (3215), Expect = 0.000e+0
Identity = 604/604 (100.00%), Postives = 604/604 (100.00%), Query Frame = 1 
Query:    1 SQLSLPDARDFNDWKRRNGLRSDAKVFIMTGWFPCVKNALQQRGWHNNPDRTSPFFDLRWALHSSDRSAAALQPWQLSNHFVRSVGLTTKAGLLDTMRSLRWHVNADGDSVFPRCYNLSVDTDALAFMEDFKVTAATNVLKHVLRQWSPEGAHFMVNGTILEAALAVCMRRVRRASSCGESCSGRTGGSENADMDTPEGEEPLVSAVEWELLCLATHTTTNHPDPDFTGLYPLSKARDSATAAPVTSHEFYEARRRQQAEARRADVRSAAARSKAAEAVWQDVSVLGSGRLQRVRTALAALRRVHAQFDLDGTFGQNIWIIKPAAKSRGRGISCFADLGKLLECTETLHKGGGTGLDQWVVQKYIENPLLISRRKFDIRQWVLVTDWNPLTVYFCDKCYLRFGVEDYTTSTSALSNAYVHLVNNSIGKTSDNWTRVTCADNGEEVREHMWRDTTFAQYLADTGRPGAYNDIIKPRMQEIVTWAIMCGRDNVEARKNSWELYGFDFMFDDSLQPWLIEINSSPACDYSTSITQEFVQEALVDVLKVVLDMRAWEESRGNAASRPDTGLWKLLHKGPYLPMPASAFGADMTLKGTRIVKGAHKPSS 1812
            SQLSLPDARDFNDWKRRNGLRSDAKVFIMTGWFPCVKNALQQRGWHNNPDRTSPFFDLRWALHSSDRSAAALQPWQLSNHFVRSVGLTTKAGLLDTMRSLRWHVNADGDSVFPRCYNLSVDTDALAFMEDFKVTAATNVLKHVLRQWSPEGAHFMVNGTILEAALAVCMRRVRRASSCGESCSGRTGGSENADMDTPEGEEPLVSAVEWELLCLATHTTTNHPDPDFTGLYPLSKARDSATAAPVTSHEFYEARRRQQAEARRADVRSAAARSKAAEAVWQDVSVLGSGRLQRVRTALAALRRVHAQFDLDGTFGQNIWIIKPAAKSRGRGISCFADLGKLLECTETLHKGGGTGLDQWVVQKYIENPLLISRRKFDIRQWVLVTDWNPLTVYFCDKCYLRFGVEDYTTSTSALSNAYVHLVNNSIGKTSDNWTRVTCADNGEEVREHMWRDTTFAQYLADTGRPGAYNDIIKPRMQEIVTWAIMCGRDNVEARKNSWELYGFDFMFDDSLQPWLIEINSSPACDYSTSITQEFVQEALVDVLKVVLDMRAWEESRGNAASRPDTGLWKLLHKGPYLPMPASAFGADMTLKGTRIVKGAHKPSS
Sbjct:    1 SQLSLPDARDFNDWKRRNGLRSDAKVFIMTGWFPCVKNALQQRGWHNNPDRTSPFFDLRWALHSSDRSAAALQPWQLSNHFVRSVGLTTKAGLLDTMRSLRWHVNADGDSVFPRCYNLSVDTDALAFMEDFKVTAATNVLKHVLRQWSPEGAHFMVNGTILEAALAVCMRRVRRASSCGESCSGRTGGSENADMDTPEGEEPLVSAVEWELLCLATHTTTNHPDPDFTGLYPLSKARDSATAAPVTSHEFYEARRRQQAEARRADVRSAAARSKAAEAVWQDVSVLGSGRLQRVRTALAALRRVHAQFDLDGTFGQNIWIIKPAAKSRGRGISCFADLGKLLECTETLHKGGGTGLDQWVVQKYIENPLLISRRKFDIRQWVLVTDWNPLTVYFCDKCYLRFGVEDYTTSTSALSNAYVHLVNNSIGKTSDNWTRVTCADNGEEVREHMWRDTTFAQYLADTGRPGAYNDIIKPRMQEIVTWAIMCGRDNVEARKNSWELYGFDFMFDDSLQPWLIEINSSPACDYSTSITQEFVQEALVDVLKVVLDMRAWEESRGNAASRPDTGLWKLLHKGPYLPMPASAFGADMTLKGTRIVKGAHKPSS 604
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BLAST of jgi.p|Trimin1|168119 vs. uniprot
Match: A0A7S2QUJ6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Triparma pacifica TaxID=91992 RepID=A0A7S2QUJ6_9STRA)

HSP 1 Score: 449 bits (1155), Expect = 9.650e-140
Identity = 261/674 (38.72%), Postives = 371/674 (55.04%), Query Frame = 1 
Query:   19 DARDFNDWKRRNGLRSDAKVFIMTGWFPCVKNALQQRGWHNNPDRTSPFFDLRWALHSSDRSAAALQPWQLSNHFVRSVGLTTKAGLLDTMRSLRWHVNADGDSVFPRCYNLSVDTDALAFMEDFKVTAATNVLKHVLRQ--------------------WSPEGAHFMVNGTILEAALAVCMRRVRRASSCGESCSGRTGGSENADMDTPEGEEP---LVSAVEWELL--------------CLATHTTTNHPDPDFTGLYPLSKA------------------RDSATAAPVTSHEFYEARR-RQQAEARRADVRSAAARSKAAEAVWQDVSVLGSGRLQRVRTALAALRRVHAQFDLDGTFGQNIWIIKPAAKSRGRGISCFADLGKLLECTETLHKGGGTGLDQWVVQKYIENPLLISRRKFDIRQWVLVTDWNPLTVYFCDKCYLRFGVEDYTTSTSALS-------------------------NAYVHLVNNSIGKTSDNWTRVTCADNGEEVREHMWRDTTFAQYLADTGRPGAYNDIIKPRMQEIVTWAIMCGRDNVEARKNSWELYGFDFMFDDSLQPWLIEINSSPACDYSTSITQEFVQEALVDVLKVVLDMRAWEESRGNAASR----PDTGLWKLLHKGPYLPMPASAFGADMTLKGTRI 1785
            +ARDFNDWKR+NG+ +D KVF MTGW+PCVK  L +RGW  N DR SPFFDL+W L S+D     +Q  QL+NHF+++  +TTK G++ ++R+L W  +   D++FPR Y+L    +   FM+D++   A ++LK +L +                    +  +G++F VN  + ++ L VC +                G  +  D    + ++P   LVS +E EL+              C     T   P      L    KA                  +D  TA+ + +   YEAR  R++ E R+   +      K  E   +DV  +    L R++  +  L++      LDG    N+WI+KPA KSRGRGI+ F DLGK+L+ T+  + G G   +QWVVQKY+ENPL I++RKFD+RQW+LVTDWNPLT++F D CY RF V  Y     +L                          N YVHLVNNSI   +  + +   A+NG EV ++MW   TF +++        +++ IKPRM+EI  +AIMC +D VE RKNSWELYG DFMFD++ +PWLIEINSSPACDYST++T+ +VQ AL D+LKV LD + WE+ R    ++    P+TG W+L+HKG  +P P SAFG+D  + G +I
Sbjct:  491 EARDFNDWKRKNGVSADQKVFAMTGWYPCVKEDLLERGWFFNEDRESPFFDLKWTLRSTDVKNN-IQAHQLTNHFLKNTAITTKVGIMKSLRNLTWFASETEDAIFPRGYDLKNPVELAMFMDDYRCLKAESLLKLILIKSHQHGFKVDTSNLNLGSLPTFDTDGSNFSVNVRMFKSLLNVCEK----------------GSYKLEDEVIDDNQKPHASLVSDIESELILNGDKWLWKIVDVNCEGGFDTETVPSQIDQFLKDKEKAEKEKELLVTTTSTSGGIKKDPPTASQLRA---YEARMLRKKLEHRKLVGQEL---GKVKEITQEDVDRIIDV-LTRLQNTVDPLQKT-----LDGCISNNLWIVKPAGKSRGRGIATFQDLGKILDYTDAKNSGNG---EQWVVQKYMENPLTIAQRKFDVRQWILVTDWNPLTIWFYDDCYCRFAVAKYDNPQKSLDKLEGSLAACLETKGTDGIVKDKWLDNQYVHLVNNSITSKNKQFHKAYSAENGVEVVDNMWPAETFKEWIEHKTGENKWDETIKPRMKEIAKYAIMCAQDMVEHRKNSWELYGVDFMFDENYKPWLIEINSSPACDYSTAVTESYVQRALPDILKVTLDYKGWEKKRAEGKAKKSAEPETGGWELIHKGADIPTPLSAFGSDFGITGNKI 1132
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BLAST of jgi.p|Trimin1|168119 vs. uniprot
Match: A0A6G0WZ03_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WZ03_9STRA)

HSP 1 Score: 431 bits (1109), Expect = 9.190e-137
Identity = 240/619 (38.77%), Postives = 348/619 (56.22%), Query Frame = 1 
Query:   13 LPDARDFNDWKRRNGLRSDAKVFIMTGWFPCVKNALQQRGWHNNPDRTSPFFDLRWALHSSDRSAAALQPWQLSNHFVRSVGLTTKAGLLDTMRSLRWHVNADGDSVFPRCYNLSVDTDALAFMEDFKVTAATNVLKHV---LRQWSPEGAHFMVNGTILEAALAVCMRRVRRASSCGESCSGRTGGSENADMDTPEGEEPLVSAVEWELLCL----------ATHTTTNHPDPDFTGLYPLSKARDSATAAPVTSHEFYEARRRQQAEARRADVRSAAARSKAA-EAVWQDVSVLGSGRLQRVRTALAALRRVHAQFDLDGTFGQNIWIIKPAAKSRGRGISCFADLGKLLECTETL-HKGGGTGLDQWVVQKYIENPLLISRRKFDIRQWVLVTDWNPLTVYFCDKCYLRFGVEDYTTSTSALSNAYVHLVNNSIGKTSDNWTRVTCADNGE-EVREHMWRDTTFAQYL-------ADTGRPGAYNDIIKPRMQEIVTWAIMCGRDNVEARKNSWELYGFDFMFDDSLQPWLIEINSSPACDYSTSITQEFVQEALVDVLKVVLDMRAWEESR--GNAASRPDTGLWKLLHKGPYLPMPASAFG-ADMTLKGTRIVK 1791
            +P+A+DF  WK+RNG+  D KVF +TGW+P +K  L++RGW +NPDR SP+FDL+WAL S D     L   QL NHF+++  +TTK GLL  +R++ W ++ D DS FPR Y+L+  +D  A  + F+   A  +LK +    + +  +    + N  +++  LAVC++R                  +  D     G EPLV+ ++WE+L            A    T  P P+ T   PLS +     A    + +                + +A A+ KA   ++   V+ L     Q +   L  L     QF L+G   +N+WI+KPA  SRGRGI  F  L +LL   +   HK       QW+VQKYIENPLL+  RKFDIRQWV VT WNPLTV+F   CYLRF  E+Y      LS+ +VHL NNSI K  +N+ +    ++G   V  +MW      +YL       A+TG    +   I+PRM+EIV W++ C +D+++ RKNS ELYG+DFM DD+ +PWLIE+NSSPACDYST++T+ +++  L D+LKV+LD+R ++  R     A  PDTG W+ +HKG ++  P ++FG +D  +KG ++ K
Sbjct:  325 VPEAKDFASWKKRNGVAQDTKVFCLTGWYPVIKETLEKRGWFHNPDRNSPYFDLKWALKSDDLKNVKLNEDQLVNHFLQNTAITTKVGLLHNLRNITWFLSEDIDSFFPRAYDLNEPSDMQATKQHFRYIHAEGMLKRLGVQCQAFLDQDIPVLANAGVIDVLLAVCLKRQEILPD------------DALDNSDSCGVEPLVTDLQWEVLTRCNLNGPSAIRAAFVYTKPPPPE-TSEQPLSPSEQKEEAKLARTQDKL--------------MEAAFAKEKARLNSLLAQVAPLSIESAQEILAILKVLEAHCPQFHLNGADSKNVWIVKPAGMSRGRGIRVFNQLHELLAYADVENHKEC-----QWIVQKYIENPLLVCNRKFDIRQWVFVTSWNPLTVWFYLDCYLRFSSEEYQVDD--LSDQFVHLTNNSIQKNGENFYKAYSTEDGSMTVEGNMWHSDDLNEYLNRKFGLDAETGE-SIFKSKIQPRMKEIVVWSLSCVQDSIQHRKNSCELYGYDFMLDDTFKPWLIEVNSSPACDYSTAVTKRYIETGLEDILKVMLDVREYDMKRKSNQPAKMPDTGRWENIHKGEFIAKPLASFGGSDFEIKGKKMTK 908
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BLAST of jgi.p|Trimin1|168119 vs. uniprot
Match: W4FJN3_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FJN3_9STRA)

HSP 1 Score: 433 bits (1114), Expect = 1.930e-136
Identity = 244/637 (38.30%), Postives = 351/637 (55.10%), Query Frame = 1 
Query:   13 LPDARDFNDWKRRNGLRSDAKVFIMTGWFPCVKNALQQRGWHNNPDRTSPFFDLRWALHSSDRSAAALQPWQLSNHFVRSVGLTTKAGLLDTMRSLRWHVNADGDSVFPRCYNLSVDTDALAFMEDFKVTAATNVLKHVLRQWSPEGAHFMVNGTILEAALAVCMRRVRRASSCGESCSGRTGGSENADMDTPE--GEEPLVSAVEWELLCLA-----------------------THTTTNHPDPDFTGLYPLSKARDSATAAPVTSHEFYEARRRQQAEARRADVRSAAARSKAAEAVWQDVSVLGSGRLQRVRTALAALRRVHAQFDLDGTF-GQNIWIIKPAAKSRGRGISCFADLGKLLECTETL-HKGGGTGLDQWVVQKYIENPLLISRRKFDIRQWVLVTDWNPLTVYFCDKCYLRFGVEDYTTSTSALSNAYVHLVNNSIGKTSDNWTRV-TCADNGEEVREHMWRDTTFAQYLA-------DTGRPGAYNDIIKPRMQEIVTWAIMCGRDNVEARKNSWELYGFDFMFDDSLQPWLIEINSSPACDYSTSITQEFVQEALVDVLKVVLDMRAWEESRGN----AASRPDTGLWKLLHKGPYLPMPASAFGA-DMTLKGTRIVKGAHK 1803
            +P+A+DF  WK+RNG+  D KVF +TGW+P +K  L++RGWH+NPDR SP+FDL+WAL S D  +  L   QL NHF+++  +TTK+GLL  +R++ W ++ D DS FPR Y+L+  TD  ++++DF+   A  +LK +  +     A   VN  +L+  L+VC +R                   +  +D P   G EP+V+ ++WE+L  +                       T  T++ P P  T      +A+ +     +    F + + R                      +   V  L +    +V   LA L  +  QF L+G    +N+WI+KPA  SRGRGI  F  L +LLE  +   HK       QW+VQKYIENPLL+  RKFDIRQWV VT WNPLTV+F   CYLRF  E+Y      LS+ YVHL NNSI K  +N+ R  T  D    V  +MW      ++L        DT +   +   I+PRM+EIV W++ C +D V+ RKNS ELYG+DFM DD L+PWLIE+NSSPACDYST++T+ ++Q  L D+LKV+LD+R ++ ++         +PDTG W+ +HK  Y+  P S+FG  D  +KG ++ K + +
Sbjct:  360 VPEAKDFTSWKKRNGVALDTKVFCLTGWYPVIKETLEKRGWHHNPDRNSPYFDLKWALKSDDLKSVKLNDDQLVNHFLQNTAITTKSGLLHNLRNVTWFLSEDIDSFFPRAYDLNEPTDMQSYIQDFRYIHAEGMLKRLGDKCRNANAMPHVNAGVLDVLLSVCRKRQEILP--------------DDILDNPLACGIEPVVTDLQWEVLQRSPLDAPGSIRASFGFTKPSTATSWTTETSDQPPPHMTPSEVKEEAKAAKRLERLMEAAFVQEKTR-------------------LNGLLSQVVPLSTDTATKVLELLAGLEELCPQFHLNGGVDSKNVWIVKPAGMSRGRGIRVFNQLHELLEYADVENHKEC-----QWIVQKYIENPLLVCNRKFDIRQWVFVTSWNPLTVWFYLDCYLRFSSEEYQVDD--LSDQYVHLTNNSIQKNGENFYRAYTTEDGSMTVEGNMWHSDELTEHLTRKYGVDPDTNQ-SLFTSKIQPRMKEIVKWSLSCVQDTVQHRKNSCELYGYDFMLDDKLKPWLIEVNSSPACDYSTAVTKRYIQTGLEDILKVMLDVREYDAAKRKNNQTKMPKPDTGRWENIHKAEYIAKPMSSFGGMDFEIKGKKLSKKSQR 955
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BLAST of jgi.p|Trimin1|168119 vs. uniprot
Match: A0A1V9ZU13_9STRA (Tubulin-tyrosine ligase family n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZU13_9STRA)

HSP 1 Score: 423 bits (1087), Expect = 3.370e-133
Identity = 244/611 (39.93%), Postives = 353/611 (57.77%), Query Frame = 1 
Query:   13 LPDARDFNDWKRRNGLRSDAKVFIMTGWFPCVKNALQQRGWHNNPDRTSPFFDLRWALHSSDRSAAALQPWQLSNHFVRSVGLTTKAGLLDTMRSLRWHVNADGDSVFPRCYNLSVDTDALAFMEDFKVTAATNVLKHVLRQWSPEGAHFMVNGTILEAALAVCMRRVRRASSCGESCSGRTGGSENADMDTPEGEEPLVSAVEWELLCLATHTTTNHPDPDFTGLYPLSKARDSATAAPVTSHEFYEARRRQQAEARRADVRSAAARSKAA-EAVWQDVSVLGSGRLQRVRTALAALRRVHAQFDLDGTFGQNIWIIKPAAKSRGRGISCFADLGKLLECTETL-HKGGGTGLDQWVVQKYIENPLLISRRKFDIRQWVLVTDWNPLTVYFCDKCYLRFGVEDYTTSTSALSNAYVHLVNNSIGKTSDNWTRVTCADNGE-EVREHMWRDTTFAQYLADT-GRPGAYNDII-----KPRMQEIVTWAIMCGRDNVEARKNSWELYGFDFMFDDSLQPWLIEINSSPACDYSTSITQEFVQEALVDVLKVVLDMRAWEES-RGNAASR---PDTGLWKLLHKGPYLPMPASAFG-ADMTLKGTRIVKGAHK 1803
            +P+A+DF  WK+RNGL  D KVF +TGW+P +K AL+ RGW +NPDR+SP+FDL+WAL S D     L   QL NHF+++  +TTK GLL  +R++ W ++ D DS FPR Y+L+  +D  A+++D++   A  +LK +  Q S       VN  +L+  L+VC +R                  +  D     G EP+V+ ++WE+L   + +        F    P   A  +A A  ++  E  E  R   A  +   + +A A+ K    A+   + V     +  V   L +L  +  QF L+G   +N+WI+KPA  SRGRGI  F  L +LL   +   HK       QW+VQKYIENPLL+  RKFDIRQWV VT WNPLTV+F   CYLRF  E+Y  +   LS+ +VHL NNSI K  DN+ +    ++G   V  +MW       YL+   G     N+ I     +PRM++IV+W++ C +D V  RKNS ELYG+DFM D+  +PWLIE+NSSPACDYST+IT+ +V+  L D+LKV+LD+R ++ S R N+ ++   PDTG W+ + K  Y+  P S+FG +D  ++G ++ K + +
Sbjct:  350 VPEAKDFASWKKRNGLAPDTKVFCITGWYPVIKEALEARGWFHNPDRSSPYFDLKWALKSDDLKNVKLNEDQLVNHFMQNTAITTKVGLLHNLRNITWFLSEDIDSFFPRAYDLNEPSDMQAYIQDYRYIHAEGMLKRLRTQGSQP-----VNLGVLDVLLSVCRKRQEILPD------------DILDNADACGIEPVVTDLQWEVLQRCSISAPGAIRASFQYTKPPVVADPNAPATELSPSEQREDARL--ARKQEKYLENAFAKEKVRLNALLSQMEVPSPNVMATVNELLQSLEALCPQFHLNGVDCKNVWIVKPAGMSRGRGIRVFNQLAELLAYADVENHKEC-----QWIVQKYIENPLLVCNRKFDIRQWVFVTSWNPLTVWFYMDCYLRFSSEEYQMND--LSDQFVHLTNNSIQKFGDNFYKAYSTEDGSMTVEGNMWHSDDLQAYLSKRYGLDPETNESIWLGQIQPRMKQIVSWSLQCVQDTVAHRKNSCELYGYDFMIDEQFKPWLIEVNSSPACDYSTAITKRYVETGLTDILKVMLDVREYDASKRRNSQTKMPKPDTGRWENIVKAEYIAKPLSSFGGSDFEVRGKKLSKKSQR 934
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BLAST of jgi.p|Trimin1|168119 vs. uniprot
Match: A0A8K1FG59_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FG59_PYTOL)

HSP 1 Score: 426 bits (1095), Expect = 4.490e-133
Identity = 253/640 (39.53%), Postives = 355/640 (55.47%), Query Frame = 1 
Query:   13 LPDARDFNDWKRRNGLRSDAKVFIMTGWFPCVKNALQQRGWHNNPDRTSPFFDLRWALHSSDRSAAALQPWQLSNHFVRSVGLTTKAGLLDTMRSLRWHVNADGDSVFPRCYNLSVDTDALAFMEDFKVTAATNVLKHVLR-----QWSPEGAHFMVNGTILEAALAVCMRRVRRASSCGESCSGRT------GGSENADMDTPEGEEPLVSAVEWELLC-------------LATHTTT---NHPDPDFTGLYPLSKARDSATAAPVTSHEFYEARRRQQAEARRADVRSAAARSKAA-EAVWQDVSVLGSGRLQRVRTALAALRRVHAQFDLDG----------TFGQNIWIIKPAAKSRGRGISCFADLGKLLECTETL-HKGGGTGLDQWVVQKYIENPLLISRRKFDIRQWVLVTDWNPLTVYFCDKCYLRFGVEDYTTSTSALSNAYVHLVNNSIGKTSDNWTRV-TCADNGEEVREHMWRDTTFAQYLADT-GRPGAYNDIIKPRMQEIVTWAIMCGRDNVEARKNSWELYGFDFMFDDSLQPWLIEINSSPACDYSTSITQEFVQEALVDVLKVVLDMRAWEESR--GNAASRPDTGLWKLLHKGPYLPMPASAFGADMTLKGTRIVKGAHK 1803
            +P+ARDF  W++R G+RSD KVF MTGW+P ++  L++RGW  N +R SPFFDL+W+L S D     L+  Q  NHF ++  +TTK GLL  +R+L WH + D D+VFPR Y+L+   D   F+ DF+ + A  VLK V +     Q     +   +N   ++   +V  +++R     G    G           E+ D     G + LV+ +EWE+L              LA    T   +  D D  G  P+S   D+  +A        E ++++Q E  R D   A  R K    ++   V+ L       +    + L +V  QF L+G             +N+WI+KPA  SRGRGI  F +L  LLE  +   HK       QWV QKYIENPLLI +RKFDIRQWVLVTDW+PLTV+F D CYLRF  E+Y  S   L + YVHL NNSI K SD +  V T  D    V  +MW    F QY+ DT GR   +N  ++PRM++IV  ++ C +D V+ RKN  ELYG+DFM D++L+PWLIE+NSSPACDYST   + +V+  L  ++KV++D R +E+ +  G+    PDTG W+ +H+  Y+  P S+FGAD  +KG ++ +   K
Sbjct:  431 IPEARDFASWRKRYGVRSDQKVFCMTGWYPVIREELEKRGWFFNQERNSPFFDLKWSLKSDDLKGIKLEKHQYVNHFFQNTAITTKVGLLHNLRNLSWHQSVDIDTVFPRAYDLNEPRDMDDFVMDFRYSFAEGVLKEVAKRLLHHQTQKSSSSIRLNEAFIDVLRSVARKKLRYKRVLGSHDEGEDDLGFVDALEESVDEMVTAGMDDLVTELEWEVLTRCQLDAPGAFRASLAYKKRTVVDDKTDLDGAGP-PMSNGVDTVQSA-------LEKKQQRQLEKMRMD---AFQREKTRLGSLLSRVTPLSKQTTDELVQLTSTLAKVCPQFHLNGGGDLQSTDPENKSRNVWIVKPAGMSRGRGIRVFNNLEALLEYADVENHKEC-----QWVAQKYIENPLLICKRKFDIRQWVLVTDWDPLTVWFYDDCYLRFSSEEY--SMDDLGDQYVHLTNNSIQKYSDKFNDVYTTEDGAMHVEGNMWHSDDFQQYIRDTLGRGDVFNRDMQPRMKQIVVQSLQCVQDMVQHRKNCCELYGYDFMVDETLRPWLIEVNSSPACDYSTPTAKRYVETGLAGIVKVIVDHREFEQKKKAGHNVDEPDTGRWRRVHRAEYIGKPVSSFGADFQVKGVKVGRSRSK 1052
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BLAST of jgi.p|Trimin1|168119 vs. uniprot
Match: D8LPR6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPR6_ECTSI)

HSP 1 Score: 431 bits (1107), Expect = 4.110e-131
Identity = 283/869 (32.57%), Postives = 364/869 (41.89%), Query Frame = 1 
Query:   22 ARDFNDWKRRNGLRSDAKVFIMTGWFPCVKNALQQRGWHNNPDRTSPFFDLRWALHSSDRSAAALQPWQLSNHFVRSVGLTTKAGLLDTMRSLRWHVNADGDSVFPRCYNLSVDTDALAFMEDFKVTAATNVLKHVL-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RQWSPEGAHFMVNGTILEAALAVCMRRVRRASSCGESCSGRTGGSENADMDTPEGEEPLVSAVEWELLCLATHTTTNHPDPDFTGLY---PLSKARDSATAAPVTSHEFYEARRRQQA-EARRADVRSAAARSKAAEAVWQDVSVLGSGRLQRVRTALA-ALRRVHAQFDLDGTFGQNIWIIKPAAKSRGRGISCFADLGKLLECTETLHKGGGTGLDQWVVQKYIENPLLISRRKFDIRQWVLVTDWNPLTVYFCDKCYLRFGVEDYTTSTSALSNAYVHLVNNSIGKTSDNWTRVTCADNGEEVREHMWRDTTFAQYLADTGRPGAYNDIIKPRMQEIVTWAIMCGRDNVEARKNSWELYGFDFMFDDSLQPWLIEINSSPACDYSTSITQEFVQEALVDVLKVVLDMRAWEESRGN 1674
            ARDFNDWKR++ +  + KVF+MTGW+PCVK AL +RGW  N DR SPFFDL+W LHS D     ++PWQL NHF ++V +TTKAGLL  +R+L+W  + D   + PR Y+LS+DTD L F++D+  TAA ++LKHV                                                                                                                                                                                                                                                                                                                          R W PEGA   VN  I+ AALAVC R+  R             G     +D+    E L S +EWEL+ L T     HPD    GLY   PL     +   A + +    EA  +    E RR   +    R+   E V + V  LG   LQ V   L  A     +QFDL+G F QN+WI+KPAAKSRGRGI CF +L +LL  TE+        + QWVV KYIENPL+I+RRKFD+RQWVLVTDWNPLTV+F D+CY+RFGVE+YTTS S + N +VHLVNNSI K SDN+ +V+ ADNG EV EHMW +  F  Y+ +    G +   ++PRM++IVTW+++C +D VE RK SWELYG+DFM DD  +PWLIEINSSPACDYST +T+++VQ AL D+LKV +D+ AWE ++ N
Sbjct:  666 ARDFNDWKRKHKVAPETKVFVMTGWYPCVKKALIERGWTQNHDRDSPFFDLKWTLHSQDIRTTDIEPWQLCNHFFKNVAITTKAGLLGNLRNLKWFADCDCSEILPRGYDLSIDTDVLGFLDDYCATAAESLLKHVFLRAKGRVALRRLGSSAVGCPKAEAKSSPSRGCDGGMDSDENDVYDDEXXXXXXSSVDDEKEGEEAVPRPPPRSGSSPSMVSPKTATPTVVSTTGATAPPSVSSVDDRVTARNAAADPGGAMTTPPESSRGAKSLAAEGAVSPTDDGVVGGTQTESRAAFKQTADLGPVSAAGSVVAASAATPAVAPSKPVEVGAVGTAEVGTPMTAPPPSAQTGPSSLVPEDSEQGLRQQHQQPSGVPVPXXXXXXXXXXXXXXGSLSSSMVGKEAGRENDASTDQKGRAAQATDGTIGKGDGSDGGGGAKLRRQMPPVSARRRPWEPEGAGIQVNAEIIGAALAVCRRKHARV------------GEGEGGLDSGGPAEALCSELEWELIGLGTGGGAPHPD--MPGLYRPHPLPSRPATPLEAFIQTQAEKEASSKSGTREGRRKQKQQDDLRAACTERV-RTVVPLGDAMLQEVEAVLERAAMASRSQFDLNGDFCQNMWIVKPAAKSRGRGIECFTELDRLLNYTESKQP---QAVSQWVVHKYIENPLIIARRKFDMRQWVLVTDWNPLTVWFYDRCYVRFGVEEYTTSGSNIGNNFVHLVNNSICKKSDNFGKVSVADNGIEVHEHMWSNEVFTAYVDEVAGKGCWRKRMQPRMEQIVTWSLLCAQDLVEHRKKSWELYGYDFMVDDQYKPWLIEINSSPACDYSTKVTEQYVQAALTDLLKVTIDLPAWEANQRN 1516
[Close]
BLAST of jgi.p|Trimin1|168119 vs. uniprot
Match: A0A485KMD4_9STRA (Aste57867_9242 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KMD4_9STRA)

HSP 1 Score: 419 bits (1077), Expect = 4.520e-131
Identity = 246/645 (38.14%), Postives = 357/645 (55.35%), Query Frame = 1 
Query:   13 LPDARDFNDWKRRNGLRSDAKVFIMTGWFPCVKNALQQRGWHNNPDRTSPFFDLRWALHSSDRSAAALQPWQLSNHFVRSVGLTTKAGLLDTMRSLRWHVNADGDSVFPRCYNLSVDTDALAFMEDFKVTAATNVLKHV---LRQWSPEGAHFMVNGTILEAALAVCMRRVRRASSCGESCSGRTGGSENADMDTPEGEEPLVSAVEWELLCLATHTTTNHPDPDFTGLYPLSKA---------RDSATAAPVTSHEFYEARRRQQAEARRADVRSAAARSKAA-EAVWQDVSVLGSGRLQRVRTALAALRRVHAQFDLDG-TFGQNIWIIKPAAKSRGRGISCFADLGKLLECTETL-HKGGGTGLDQWVVQKYIENPLLISRRKFDIRQWVLVTDWNPLTVYFCDKCYLRFGVEDYTTSTSALSNAYVHLVNNSIGKTSDNWTRVTCADNGEE---------------------VREHMWRDTTFAQYLADTGRPGA--------YNDIIKPRMQEIVTWAIMCGRDNVEARKNSWELYGFDFMFDDSLQPWLIEINSSPACDYSTSITQEFVQEALVDVLKVVLDMRAWEES--RGNAAS-RPDTGLWKLLHKGPYLPMPASAFG-ADMTLKGTRIVKGAHK 1803
            +P+A+DF  WK+RNGL  D KVF +TGW+P +K+ L++RGW++NPDR SP FDL+WAL S D     L   QL NHF+++  +TTK GLL  +R++ W ++ D DS FPR Y+L+  +D  A+++DF+   A  +LK +    R +       +VN  +++  LAVC +R+                 +  D     G EP+V+ ++WE+L  ++                 SKA          D        S +  +AR+ ++ E  R     A  + KA    +   +  L     Q V   L  L  +  QF L+G    +N+WI+KPA  SRGRGI  F  L +LLE  +   HK       QW+VQKYIENPLL+  RKFDIRQWV VT WNPLTV+F   CYLRF  E+Y      LS+ YVHL NNSI K  +N+ +    ++G                       +R +MW     +QYL  T R G         +   I+PRM++IV W++ C +D ++ RKNS ELYG+DFM D++ +PWLIE+NSSPACDYSTS+T+ ++Q  L D+LKV+LD+R ++ +  RG A+  +PDTG W+ +HK  Y+  P ++FG +D  +KG ++ K + +
Sbjct:  380 IPEAKDFASWKKRNGLAQDTKVFCLTGWYPVIKDTLEKRGWYHNPDRNSPHFDLKWALKSDDLKNVKLNEDQLVNHFLQNTAITTKVGLLHNLRNITWFLSEDIDSFFPRAYDLNEPSDMQAYIQDFRYIHAEGMLKRLGSRCRAFLDHDVPVVVNAGVVDVVLAVCRKRLEILPD------------DVLDNVDAAGVEPVVTDLQWEVLQRSSMDAVG----SIRAAIAYSKAVVESGGGVGGDGPPPQLTPSEQKEDARQAKKCEKMR---EMAFVKEKARLNGLLGQMEALTIESAQDVVALLRDLEDMCPQFHLNGGAESKNVWIVKPAGMSRGRGIRVFNQLKELLEYADVENHKEC-----QWIVQKYIENPLLVCNRKFDIRQWVFVTSWNPLTVWFYLDCYLRFSSEEYQVDD--LSDQYVHLTNNSIQKNGENFYKAYATEDGSMTVEGYNHLVLKLLASAGRLMIMRSNMWHSDDLSQYL--TKRYGLDPETNESIFASKIQPRMKDIVKWSLSCVQDTIQHRKNSCELYGYDFMLDETFKPWLIEVNSSPACDYSTSVTKRYIQTGLEDILKVMLDVREYDNAKRRGFASMPKPDTGRWENIHKAEYIAKPLASFGGSDFEIKGKKLSKKSQR 996
[Close]
BLAST of jgi.p|Trimin1|168119 vs. uniprot
Match: A0A024UAI4_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UAI4_9STRA)

HSP 1 Score: 416 bits (1070), Expect = 4.610e-130
Identity = 241/622 (38.75%), Postives = 353/622 (56.75%), Query Frame = 1 
Query:   13 LPDARDFNDWKRRNGLRSDAKVFIMTGWFPCVKNALQQRGWHNNPDRTSPFFDLRWALHSSDRSAAALQPWQLSNHFVRSVGLTTKAGLLDTMRSLRWHVNADGDSVFPRCYNLSVDTDALAFMEDFKVTAATNVLKHVLRQWSP-----EGAHFMVNGTILEAALAVCMRRVRRASSCGESCSGRTGGSENADMDTPE--GEEPLVSAVEWELL--CLATHTTTNHPDPDFTGLYPLSKARDSATAAPVTSHEFYEARRRQQAEARRADVRSAAARSKAAE--AVWQDVSVLGSGRLQRVRTALAALRRVHAQFDLDGTFGQNIWIIKPAAKSRGRGISCFADLGKLLECTETL-HKGGGTGLDQWVVQKYIENPLLISRRKFDIRQWVLVTDWNPLTVYFCDKCYLRFGVEDYTTSTSALSNAYVHLVNNSIGKTSDNWTRVTCADNGE-EVREHMWRDTTFAQYLA-------DTGRPGAYNDIIKPRMQEIVTWAIMCGRDNVEARKNSWELYGFDFMFDDSLQPWLIEINSSPACDYSTSITQEFVQEALVDVLKVVLDMRAWEES-RGNAASR---PDTGLWKLLHKGPYLPMPASAFGA-DMTLKGTRIVKGAHK 1803
            +P+A+DF  WK+RNG+  D KVF MTGW+P +K+ L++RGW +NPDR SP+FDL+WAL S D     L   QL NHF+++  +TTK+GLL  +R++ W ++ D DS FPR Y+L+   D  ++++DF+   A  +LK +  Q        + +   VN  +L+  L+VC +R                   +  +D P   G +P+V+ ++W++L  C      +  P   FT   P   A       P       EA+   +A  R   +  AA   + A    +   V  L +    +V   L  L  +  QF L+G   +N+WI+KPA  SRGRGI  F  L +LLE  +   HK       QW+VQKYIENPLL+  RKFDIRQWV VT WNPLTV+F   CYLRF  E+Y      L++ YVHL NNSI K  +N+ +    ++G   +  +M      + YL        DT     +   I+PRM+EIV W++ C +D V+ RKNS ELYG+DFM D++ +PWLIE+NSSPACDYST++T+ +++  L D+LKV+LD+R ++ + R N+ ++   PDTG W+ +HK  Y+  P S+FG  D  +KG ++ K + +
Sbjct:  366 VPEAKDFASWKKRNGVAPDTKVFCMTGWYPVIKDTLEKRGWFHNPDRNSPYFDLKWALKSDDLKNVKLHDDQLVNHFLQNTAITTKSGLLHNLRNVTWFLSEDIDSFFPRAYDLNEPADMQSYIQDFRYIRAEGMLKRLGVQCRAMLNAIKPSVVSVNLGVLDVVLSVCRKRQEILP--------------DDVLDNPNACGIDPVVTDLQWDVLQRCPVDAPGSIRPACVFTK--PSVAASSEFGDQPPPHLSPSEAKEEAKAAKRHEKLMEAAFIKEKARLNTLLSQVVPLTNETATKVLELLQGLEDMCPQFHLNGADSKNVWIVKPAGMSRGRGIRVFNQLNELLEYADVENHKEC-----QWIVQKYIENPLLVCNRKFDIRQWVFVTSWNPLTVWFYLDCYLRFSSEEYQVDD--LTDQYVHLTNNSIQKNGENFYKAYTTEDGSITIEGNMLHSDDLSAYLTRKYGLDPDTNET-IFTSKIQPRMKEIVKWSLSCVQDTVQHRKNSCELYGYDFMLDETFKPWLIEVNSSPACDYSTAVTKRYIETGLEDILKVMLDVREYDAAKRKNSMAKMPKPDTGRWENIHKAEYIAKPMSSFGGMDFEIKGKKLSKKSQR 963
[Close]
BLAST of jgi.p|Trimin1|168119 vs. uniprot
Match: G4ZDW9_PHYSP (Uncharacterized protein (Fragment) n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZDW9_PHYSP)

HSP 1 Score: 416 bits (1069), Expect = 5.560e-130
Identity = 251/634 (39.59%), Postives = 356/634 (56.15%), Query Frame = 1 
Query:   13 LPDARDFNDWKRRNGLRSDAKVFIMTGWFPCVKNALQQRGWHNNPDRTSPFFDLRWALHSSDRSAAALQPWQLSNHFVRSVGLTTKAGLLDTMRSLRWHVNADGDSVFPRCYNLSVDTDALAFMEDFKVTAATNVLKHV------LRQWSPEGAHFMVNGTILEAALAVCMRRV---RRASSCGESCSGRTGG-SENADMDTPEGEEPLVSAVEWELLCLATHTTTNHPDPDFTGLYPLSK--ARDSATAA------PVTSHEFYEARRRQQAEARRADVRSAAARSKAAEA-VWQDVSVLGSGRLQRVRTALAALRRVHAQFDLDG---------------TFGQNIWIIKPAAKSRGRGISCFADLGKLLECTETL-HKGGGTGLDQWVVQKYIENPLLISRRKFDIRQWVLVTDWNPLTVYFCDKCYLRFGVEDYTTSTSALSNAYVHLVNNSIGKTSDNWTRVTCADNGE-EVREHMWRDTTFAQYLA-DTGRPGAYNDIIKPRMQEIVTWAIMCGRDNVEARKNSWELYGFDFMFDDSLQPWLIEINSSPACDYSTSITQEFVQEALVDVLKVVLDMRAWEE---SRGNAAS---RPDTGLWKLLHKGPYLPMPASAFGADMTLKGTRI 1785
            +P+ARDF  WK+R+G+  D KVF MTGW+P ++  L++RGW  N +R SP+FD +W+L S +  A  L+ +Q  NHF ++  +TTK GL+  +RS  WH + D D++FPR Y+L+   D   F++DF+   A  +LK +      L+Q  P  A    N  +++  LA+  ++V   R  S+  ES  G      E+ D     G   LV+ ++WE+L   T+ + + P      L    K  A D    A      P T     E R ++ AE  +AD  +   R KA  + +   VS++     +        L ++ AQF ++G               +  QN+WI+KPA  SRGRGI  F DL +LLE  +   HK       QWV QKYIENPLL+ +RKFDIRQWVLVT W+PLTV+F + CYLRF  E+Y  S   LS+ YVHL NNSI K SD +  V   D+GE +V  +MW    F ++L    G+P  +   + PRM+EIV  ++ C +D V+ R NS ELYG+DFM  + L PWLIE+NSSPACDYST I Q +V+  L  ++KVV+D R +E+   S G  AS    PDTG W+ +HK  Y+  P S++  D  +KG ++
Sbjct:  376 IPEARDFASWKKRHGVAPDQKVFCMTGWYPVIREELEKRGWFYNQERVSPYFDFKWSLKSDELRAFKLEKYQYVNHFAQNAAITTKVGLIHNLRSAVWHQSVDIDAMFPRAYDLNDLMDMDNFVQDFRYGVAEGLLKQLARRGLQLKQKLPGTASMGANEALVDVVLAIARKKVKSKRPESNNVESVGGALDPLEESVDDPLSTGVNELVTDLQWEVL---TNCSLDKPGRLRASLVYKKKVYAEDKDVTAGVDGKSPDTVLSAREKRMQRHAEKLQADAFN---REKARLSNLIAHVSLVREEVFEEAIRLARELEKLCAQFHINGGAEFLLNDEHPAAATSTSQNVWIVKPAGMSRGRGIRVFNDLDQLLEYVDVENHKEC-----QWVAQKYIENPLLLCKRKFDIRQWVLVTGWDPLTVWFNEDCYLRFSSEEY--SMDDLSDQYVHLTNNSIQKYSDKFNDVYATDDGEMQVEGNMWHSDDFKKFLTCKLGQPDVWEQRMHPRMKEIVVQSLQCVQDQVQHRSNSCELYGYDFMVSEDLTPWLIEVNSSPACDYSTPIAQRYVESGLSGIIKVVVDHREYEQRKRSGGGGASAIDEPDTGCWRRIHKAEYVGKPMSSYAVDFQVKGAKV 996
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|168119 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CCI3_9STRA0.000e+0100.00Tubulin-tyrosine ligase family-domain-containing p... [more]
A0A7S2QUJ6_9STRA9.650e-14038.72Hypothetical protein (Fragment) n=1 Tax=Triparma p... [more]
A0A6G0WZ03_9STRA9.190e-13738.77Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
W4FJN3_9STRA1.930e-13638.30Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
A0A1V9ZU13_9STRA3.370e-13339.93Tubulin-tyrosine ligase family n=1 Tax=Achlya hypo... [more]
A0A8K1FG59_PYTOL4.490e-13339.53Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
D8LPR6_ECTSI4.110e-13132.57Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A485KMD4_9STRA4.520e-13138.14Aste57867_9242 protein n=1 Tax=Aphanomyces stellat... [more]
A0A024UAI4_9STRA4.610e-13038.75Uncharacterized protein n=3 Tax=Aphanomyces invada... [more]
G4ZDW9_PHYSP5.560e-13039.59Uncharacterized protein (Fragment) n=1 Tax=Phytoph... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_55contigContig_55:805394..809149 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|168119|e_gw1.55.202.1
BRITEko00000,ko00001,ko01000,ko04131,ko04812
KEGG Pathwayko04144,ko04666,ko04810,ko05100,ko05130,ko05131,ko05132,map04144,map04666,map04810,map05100,map05130,map05131,map05132
KEGG koko:K05755,ko:K16608
GOsGO:0000003,GO:0000226,GO:0001578,GO:0003006,GO:0003341,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0005856,GO:0005929,GO:0005930,GO:0006464,GO:0006807,GO:0006928,GO:0006996,GO:0007010,GO:0007017,GO:0007018,GO:0007275,GO:0007276,GO:0007281,GO:0007283,GO:0007286,GO:0007291,GO:0007349,GO:0008150,GO:0008152,GO:0009653,GO:0009987,GO:0015630,GO:0016043,GO:0016874,GO:0016879,GO:0016881,GO:0018094,GO:0018193,GO:0018200,GO:0019538,GO:0019953,GO:0022412,GO:0022414,GO:0022607,GO:0030030,GO:0030031,GO:0030154,GO:0032501,GO:0032502,GO:0032504,GO:0032838,GO:0035082,GO:0036211,GO:0042995,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044430,GO:0044441,GO:0044444,GO:0044446,GO:0044463,GO:0044464,GO:0044703,GO:0044782,GO:0048232,GO:0048468,GO:0048515,GO:0048609,GO:0048646,GO:0048856,GO:0048869,GO:0051704,GO:0060271,GO:0070735,GO:0070736,GO:0070737,GO:0070738,GO:0070925,GO:0071704,GO:0071840,GO:0097014,GO:0099568,GO:0120025,GO:0120031,GO:0120036,GO:0120038,GO:0140096,GO:1901564
Preferred nameTTLL8
Descriptionprotein polyglycylation
COG categoryS
Max annot lvl2759|Eukaryota
EggNOG OGsKOG2157@1|root,KOG2157@2759|Eukaryota
Evalue6.75e-132
Seed ortholog2880.D8LPR6
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionTubulin-tyrosine ligase/Tubulin polyglutamylase
Ec32 orthologEc-18_002200.1
TranscriptId168441
TrackFilteredModels1
ProteinId168119
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|168119gene_7342Tribonema minus UTEX_B_3156 geneContig_55 805394..809149 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|168119Trimin1|168119|e_gw1.55.202.1Tribonema minus UTEX_B_3156 polypeptideContig_55 805394..809149 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_7342_1exon_7342_1Tribonema minus UTEX_B_3156 exonContig_55 805394..805821 +
exon_7342_2exon_7342_2Tribonema minus UTEX_B_3156 exonContig_55 806305..806453 +
exon_7342_3exon_7342_3Tribonema minus UTEX_B_3156 exonContig_55 807237..807353 +
exon_7342_4exon_7342_4Tribonema minus UTEX_B_3156 exonContig_55 807402..808138 +
exon_7342_5exon_7342_5Tribonema minus UTEX_B_3156 exonContig_55 808766..809149 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_7342CDS_7342Tribonema minus UTEX_B_3156 CDSContig_55 805394..805821 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_7342 ID=mRNA_7342|Name=jgi.p|Trimin1|168119|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1815bp|location=Sequence derived from alignment at Contig_55:805394..809149+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
TCACAGCTGTCGTTGCCCGATGCACGCGACTTCAACGACTGGAAGCGGCG
GAACGGCCTCAGATCAGACGCCAAGGTGTTCATCATGACGGGCTGGTTCC
CGTGCGTAAAGAACGCACTGCAGCAGCGCGGCTGGCACAACAACCCCGAC
CGCACGTCCCCCTTCTTTGACCTCCGCTGGGCGCTGCACAGCTCCGACAG
ATCCGCAGCAGCGCTGCAGCCGTGGCAGCTGAGCAACCACTTTGTGCGCA
GCGTGGGCCTCACCACCAAGGCAGGCTTGCTGGACACCATGCGCAGCCTG
CGCTGGCACGTTAATGCCGACGGCGACAGCGTCTTCCCGCGCTGCTACAA
CCTGTCGGTGGACACGGACGCGCTGGCATTCATGGAGGACTTCAAGGTGA
CCGCAGCCACGAACGTGCTCAAGCACGTGCTGCGGCAGTGGTCGCCCGAA
GGCGCTCACTTCATGGTCAACGGCACCATTTTGGAGGCAGCACTGGCGGT
GTGCATGCGGCGGGTGCGGCGAGCCAGCAGCTGTGGAGAATCTTGCAGTG
GCAGAACAGGGGGGAGCGAGAATGCGGACATGGACACGCCTGAGGGCGAA
GAGCCCCTGGTATCCGCAGTGGAGTGGGAGCTTCTATGCCTGGCCACACA
CACCACCACCAACCACCCCGACCCTGACTTCACGGGTCTGTACCCACTGT
CCAAGGCACGCGACAGCGCCACCGCTGCGCCCGTTACCTCCCACGAATTC
TATGAGGCGCGGCGCCGGCAGCAGGCGGAGGCGCGCAGGGCAGACGTGCG
GAGCGCCGCTGCACGCTCAAAGGCAGCAGAAGCCGTGTGGCAGGACGTAT
CGGTGCTGGGCAGCGGGCGGTTACAGCGCGTCAGGACGGCGCTCGCGGCG
CTGAGGCGCGTGCACGCGCAGTTTGACCTCGACGGCACGTTCGGCCAGAA
CATCTGGATCATCAAGCCTGCGGCCAAGTCGCGGGGCCGCGGCATATCGT
GCTTTGCGGACCTGGGGAAGCTGCTGGAGTGCACGGAGACGCTGCACAAG
GGGGGCGGCACGGGACTGGACCAGTGGGTGGTGCAGAAGTACATTGAGAA
CCCGCTGCTGATATCGCGGCGCAAGTTCGACATCAGGCAGTGGGTGCTCG
TCACCGACTGGAACCCCCTGACCGTCTACTTCTGCGACAAGTGCTACCTG
CGCTTTGGCGTGGAGGACTACACGACCAGCACTTCTGCGCTGAGCAATGC
GTACGTGCACCTGGTCAACAACTCCATCGGCAAGACGTCGGACAACTGGA
CCAGGGTTACGTGCGCAGACAATGGGGAGGAGGTGCGCGAGCACATGTGG
CGCGATACCACATTTGCGCAGTACCTGGCGGACACGGGGAGGCCCGGCGC
CTACAACGACATCATCAAGCCCAGGATGCAGGAGATTGTGACCTGGGCCA
TCATGTGTGGCCGCGACAACGTCGAAGCCCGCAAGAACTCCTGGGAGCTC
TATGGCTTTGACTTCATGTTCGACGACTCCCTACAGCCATGGCTCATTGA
GATCAACTCCAGCCCCGCGTGTGACTACAGCACCTCCATCACTCAAGAGT
TCGTACAAGAAGCTCTTGTCGACGTGCTCAAGGTCGTCCTGGACATGAGG
GCATGGGAGGAGTCGCGCGGAAACGCTGCGAGCCGGCCAGACACGGGCCT
CTGGAAGTTGCTACACAAGGGACCATACCTACCCATGCCTGCCAGCGCGT
TTGGTGCGGACATGACGCTCAAGGGGACGCGCATTGTTAAGGGTGCGCAC
AAGCCCTCTTCGTAG
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protein sequence of jgi.p|Trimin1|168119

>Trimin1|168119|e_gw1.55.202.1 ID=Trimin1|168119|e_gw1.55.202.1|Name=jgi.p|Trimin1|168119|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=605bp
SQLSLPDARDFNDWKRRNGLRSDAKVFIMTGWFPCVKNALQQRGWHNNPD
RTSPFFDLRWALHSSDRSAAALQPWQLSNHFVRSVGLTTKAGLLDTMRSL
RWHVNADGDSVFPRCYNLSVDTDALAFMEDFKVTAATNVLKHVLRQWSPE
GAHFMVNGTILEAALAVCMRRVRRASSCGESCSGRTGGSENADMDTPEGE
EPLVSAVEWELLCLATHTTTNHPDPDFTGLYPLSKARDSATAAPVTSHEF
YEARRRQQAEARRADVRSAAARSKAAEAVWQDVSVLGSGRLQRVRTALAA
LRRVHAQFDLDGTFGQNIWIIKPAAKSRGRGISCFADLGKLLECTETLHK
GGGTGLDQWVVQKYIENPLLISRRKFDIRQWVLVTDWNPLTVYFCDKCYL
RFGVEDYTTSTSALSNAYVHLVNNSIGKTSDNWTRVTCADNGEEVREHMW
RDTTFAQYLADTGRPGAYNDIIKPRMQEIVTWAIMCGRDNVEARKNSWEL
YGFDFMFDDSLQPWLIEINSSPACDYSTSITQEFVQEALVDVLKVVLDMR
AWEESRGNAASRPDTGLWKLLHKGPYLPMPASAFGADMTLKGTRIVKGAH
KPSS*
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mRNA from alignment at Contig_55:805394..809149+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_7342 ID=mRNA_7342|Name=jgi.p|Trimin1|168119|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=3756bp|location=Sequence derived from alignment at Contig_55:805394..809149+ (Tribonema minus UTEX_B_3156 )
TCACAGCTGTCGTTGCCCGATGCACGCGACTTCAACGACTGGAAGCGGCG
GAACGGCCTCAGATCAGACGCCAAGGTGTTCATCATGACGGGCTGGTTCC
CGTGCGTAAAGAACGCACTGCAGCAGCGCGGCTGGCACAACAACCCCGAC
CGCACGTCCCCCTTCTTTGACCTCCGCTGGGCGCTGCACAGCTCCGACAG
ATCCGCAGCAGCGCTGCAGCCGTGGCAGCTGAGCAACCACTTTGTGCGCA
GCGTGGGCCTCACCACCAAGGCAGGCTTGCTGGACACCATGCGCAGCCTG
CGCTGGCACGTTAATGCCGACGGCGACAGCGTCTTCCCGCGCTGCTACAA
CCTGTCGGTGGACACGGACGCGCTGGCATTCATGGAGGACTTCAAGGTGA
CCGCAGCCACGAACGTGCTCAAGCACGTGTTGCTGCGCGCCGAGGGCAGG
CCAGATGCGCAGGCGGAGTCAAAGCACAACGGCGACGCTGCAAGCGGTGA
CAAAGCGGCTGCAGCAGCCAGCAAGGGCTGGCCGGAAGCAAGCAGTGCGA
CAGCAGCAGCTGATGACAAGCCAGCTCCATCTCTGCCATGCAAGGAGGCT
GATGGCAGCGGTGCTGCTGCTGCCGCTGCTGCTGCCGCAAGCGCCGCCAC
AGACACTAAGAGTGATGACGCCTCAGAGGGGACACTGGCTTCTGATGCGG
CATCAGCGGCGGCACCAGTGGATGCGCATGCTGACAGCAAGACCGACAAG
AGCGACACTCAACACGACTGCGCCAGCGGCAGCAGCAGTGTTTTAGAAGA
CAGCGACTTGGAGAGTGACTATGGCGGTGACGTGCCTGCAACAGCGCTCA
ACCTGCCGTCCTCAATACGGCAGAACAGCAGTGGCGCGCACGCCCGACTC
GTGTCTGCTAGGCTGCGGCAGTGGTCGCCCGAAGGCGCTCACTTCATGGT
CAACGGCACCATTTTGGAGGCAGCACTGGCGGTGTGCATGCGGCGGGTGC
GGCGAGCCAGCAGCTGTGGAGAATCTTGCAGTGGCAGAACAGGGGGGAGC
GAGAATGCGGGTGAGTCACCAGTTGCATTGCATTGTGTCTAGACTCTTGT
GATATATTCCTTATAACTTGAAGTTGACGGCCTGGTGCAATGGCACCAAC
ACTGATGAAAGTCACCAACAAGCAGCTGTTGGTACTAATGATTGCGAGCA
AATGCACTGGCAGCACGCCCCCTTCACGGTTGCCAAATGACAACGAACGG
GTATTCACCGAAAGTCTGCAGCTCACAAATTGTCAAATACAACAGCAAGC
TCATCTTCAGAAGCACGCTGCAAAAAGATGCATCAGTGATTGCAAAGCGG
CGGTAAAGGTTATGGTTATGGTCACGGTTCTCCGCACTGCCCTAGGGCTA
GGGTTAGGACGGCAAACGTAAGCATGACTTAACTTCTGCACAATCAACTT
TGTACTGGTGTACTGGTGCAAGTAAATGTACCTTTCGGCGACCAACTATT
GGACTACATCTCAAGTCCCGTAAAGGTGCATAACTTTGGGTGGCATGGTG
CGGCAGGTTGCCATGAAATGCTCAGCCTATATGCTGTCATAATGAATGTC
ACTGCTGTGACCATCTCCGCTGCAACACATTGCAGTGTGACCAAAGATCC
TTCAACAGATAATGTGGGGTTGCAAGCTGATGCATCATCTGAGCTGAGCT
CATGCTGAGCACGAGAGTATGTTGATTTGTGTGTTGTTGGTGGTGGCCCT
CCTCAACTTCAAGTGCACTGTCCGAATCTGCACGCTTTTACGAAACCTCA
CATCATGTGTTTGTGCCTTGCTGTTGCATCTTGGCAGACACAGACATGGA
CACGCCTGAGGGCGAAGAGCCCCTGGTATCCGCAGTGGAGTGGGAGCTTC
TATGCCTGGCCACACACACCACCACCAACCACCCCGACCCTGACTTCACG
GGTCTGTACCGTCGGCACACACTCCCCGACGCGCCGCCCCCAGCCCCGGA
TGCGGCAGCACTGTCCAAGGCACGCGACAGCGCCACCGCTGCGCCCGTTA
CCTCCCACGAATTCTATGAGGCGCGGCGCCGGCAGCAGGCGGAGGCGCGC
AGGGCAGACGTGCGGAGCGCCGCTGCACGCTCAAAGGCAGCAGAAGCCGT
GTGGCAGGACGTATCGGTGCTGGGCAGCGGGCGGTTACAGCGCGTCAGGA
CGGCGCTCGCGGCGCTGAGGCGCGTGCACGCGCAGTTTGACCTCGACGGC
ACGTTCGGCCAGAACATCTGGATCATCAAGCCTGCGGCCAAGTCGCGGGG
CCGCGGCATATCGTGCTTTGCGGACCTGGGGAAGCTGCTGGAGTGCACGG
AGACGCTGCACAAGGGGGGCGGCACGGGACTGGACCAGTGGGTGGTGCAG
AAGTACATTGAGAACCCGCTGCTGATATCGCGGCGCAAGTTCGACATCAG
GCAGTGGGTGCTCGTCACCGACTGGAACCCCCTGACCGTCTACTTCTGCG
ACAAGTGCTACCTGCGCTTTGGCGTGGAGGACTACACGACCAGCACTTCT
GCGCTGAGCAATGCGTACGTGCACCTGGTCAACAACTCCATCGGCAAGAC
GTCGGACAACTGGACCAGGGTTACGTGCGCAGACAATGGGGAGGAGGTGC
GCGAGCACATGTGGCGCGATACCACATTTGCGCAGTACCTGGCGGACACG
GGGAGGCCCGGCGCCTACAACGACATCATCAAGCCCAGGATGCAGGTATG
CCGCTTACCTTTGCTCAAGCTTGTCATGTGACAGACAGCGCGTATGTATG
TACAGTGATGAAGCTGAAGGATGTTACAATGTCACATGGCTTATCGTATG
CCACGTACCTCCTCAACCGTGCATGATGTTTCAGGTGTAACTGCAGCTCT
CGTAAGGGTTATTATATCAATCGTCCCTTGCATGCGGCTCTGAATGTTTC
CATGATGAATGACGTGCAGGTCATTCTGCAAGCAACTGCATGCATCTTGC
GATATTGCGAGCAAGTGGAAAAGCAAGGCATTGGAGTATGCCATGTGGGA
GAACGATTCACATGAGATCTGCAAGGCACATGCACAACACACACTACCAA
TGATGAAGCAAAGCATGCCAGCATACTCAATTGCTAATGGCAGCACAATC
TGTAGTAGTACTTGAGTTCACAGAACTAAGCCGGCGGTCAAATCAAGAAT
GTCAAGCAACACTGAAGTATCAGCTTAAACAGTCGGACGAGCCTTCAGGC
TGCCGCATCAGCACAGCGACACCTGCAGCCAACACTTTGCAGCCCTCAAC
CTTGCTCAATACTCACATTGAGCTGCATACACTGACCGTTGAACAACTTG
CTTTGTGTGTGTGTGTCCACAGGAGATTGTGACCTGGGCCATCATGTGTG
GCCGCGACAACGTCGAAGCCCGCAAGAACTCCTGGGAGCTCTATGGCTTT
GACTTCATGTTCGACGACTCCCTACAGCCATGGCTCATTGAGATCAACTC
CAGCCCCGCGTGTGACTACAGCACCTCCATCACTCAAGAGTTCGTACAAG
AAGCTCTTGTCGACGTGCTCAAGGTCGTCCTGGACATGAGGGCATGGGAG
GAGTCGCGCGGAAACGCTGCGAGCCGGCCAGACACGGGCCTCTGGAAGTT
GCTACACAAGGGACCATACCTACCCATGCCTGCCAGCGCGTTTGGTGCGG
ACATGACGCTCAAGGGGACGCGCATTGTTAAGGGTGCGCACAAGCCCTCT
TCGTAG
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Coding sequence (CDS) from alignment at Contig_55:805394..809149+

>mRNA_7342 ID=mRNA_7342|Name=jgi.p|Trimin1|168119|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1815bp|location=Sequence derived from alignment at Contig_55:805394..809149+ (Tribonema minus UTEX_B_3156 )
TCACAGCTGTCGTTGCCCGATGCACGCGACTTCAACGACTGGAAGCGGCG
GAACGGCCTCAGATCAGACGCCAAGGTGTTCATCATGACGGGCTGGTTCC
CGTGCGTAAAGAACGCACTGCAGCAGCGCGGCTGGCACAACAACCCCGAC
CGCACGTCCCCCTTCTTTGACCTCCGCTGGGCGCTGCACAGCTCCGACAG
ATCCGCAGCAGCGCTGCAGCCGTGGCAGCTGAGCAACCACTTTGTGCGCA
GCGTGGGCCTCACCACCAAGGCAGGCTTGCTGGACACCATGCGCAGCCTG
CGCTGGCACGTTAATGCCGACGGCGACAGCGTCTTCCCGCGCTGCTACAA
CCTGTCGGTGGACACGGACGCGCTGGCATTCATGGAGGACTTCAAGGTGA
CCGCAGCCACGAACGTGCTCAAGCACGTGCTGCGGCAGTGGTCGCCCGAA
GGCGCTCACTTCATGGTCAACGGCACCATTTTGGAGGCAGCACTGGCGGT
GTGCATGCGGCGGGTGCGGCGAGCCAGCAGCTGTGGAGAATCTTGCAGTG
GCAGAACAGGGGGGAGCGAGAATGCGGACATGGACACGCCTGAGGGCGAA
GAGCCCCTGGTATCCGCAGTGGAGTGGGAGCTTCTATGCCTGGCCACACA
CACCACCACCAACCACCCCGACCCTGACTTCACGGGTCTGTACCCACTGT
CCAAGGCACGCGACAGCGCCACCGCTGCGCCCGTTACCTCCCACGAATTC
TATGAGGCGCGGCGCCGGCAGCAGGCGGAGGCGCGCAGGGCAGACGTGCG
GAGCGCCGCTGCACGCTCAAAGGCAGCAGAAGCCGTGTGGCAGGACGTAT
CGGTGCTGGGCAGCGGGCGGTTACAGCGCGTCAGGACGGCGCTCGCGGCG
CTGAGGCGCGTGCACGCGCAGTTTGACCTCGACGGCACGTTCGGCCAGAA
CATCTGGATCATCAAGCCTGCGGCCAAGTCGCGGGGCCGCGGCATATCGT
GCTTTGCGGACCTGGGGAAGCTGCTGGAGTGCACGGAGACGCTGCACAAG
GGGGGCGGCACGGGACTGGACCAGTGGGTGGTGCAGAAGTACATTGAGAA
CCCGCTGCTGATATCGCGGCGCAAGTTCGACATCAGGCAGTGGGTGCTCG
TCACCGACTGGAACCCCCTGACCGTCTACTTCTGCGACAAGTGCTACCTG
CGCTTTGGCGTGGAGGACTACACGACCAGCACTTCTGCGCTGAGCAATGC
GTACGTGCACCTGGTCAACAACTCCATCGGCAAGACGTCGGACAACTGGA
CCAGGGTTACGTGCGCAGACAATGGGGAGGAGGTGCGCGAGCACATGTGG
CGCGATACCACATTTGCGCAGTACCTGGCGGACACGGGGAGGCCCGGCGC
CTACAACGACATCATCAAGCCCAGGATGCAGGAGATTGTGACCTGGGCCA
TCATGTGTGGCCGCGACAACGTCGAAGCCCGCAAGAACTCCTGGGAGCTC
TATGGCTTTGACTTCATGTTCGACGACTCCCTACAGCCATGGCTCATTGA
GATCAACTCCAGCCCCGCGTGTGACTACAGCACCTCCATCACTCAAGAGT
TCGTACAAGAAGCTCTTGTCGACGTGCTCAAGGTCGTCCTGGACATGAGG
GCATGGGAGGAGTCGCGCGGAAACGCTGCGAGCCGGCCAGACACGGGCCT
CTGGAAGTTGCTACACAAGGGACCATACCTACCCATGCCTGCCAGCGCGT
TTGGTGCGGACATGACGCTCAAGGGGACGCGCATTGTTAAGGGTGCGCAC
AAGCCCTCTTCGTAG
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