mRNA_7335 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|168050 vs. uniprot
Match: A0A835YXT5_9STRA (Inorganic diphosphatase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXT5_9STRA) HSP 1 Score: 609 bits (1570), Expect = 1.570e-220 Identity = 295/295 (100.00%), Postives = 295/295 (100.00%), Query Frame = 1 Query: 1 MRRNSNSSINLVSAGEEGTLEYRIQHVMEDHDSKVISAWHDIPLYVLDEFSNKPTGLLNFVCEIPRCSRKKFEIATKEPGNPIKQDEKKGVLREFKKGDIFFNYGCFPRTWEDPEHSHPDTGCAGDNDPLDVCEIGMRIVPTGDVRQVKVLGVLAMIDDGETDWKVIAIDADDRWAPELNDVEDVERLLPGVVDSIREWFRTYKIPDGKPPNVFGLGERCMPRTYAMKVINECYLAWKTLVSNASLGGEVPRNLSVSKLTDLMAELEPDHVLSASDHLEATSDGEAEDYPASLIA 885 MRRNSNSSINLVSAGEEGTLEYRIQHVMEDHDSKVISAWHDIPLYVLDEFSNKPTGLLNFVCEIPRCSRKKFEIATKEPGNPIKQDEKKGVLREFKKGDIFFNYGCFPRTWEDPEHSHPDTGCAGDNDPLDVCEIGMRIVPTGDVRQVKVLGVLAMIDDGETDWKVIAIDADDRWAPELNDVEDVERLLPGVVDSIREWFRTYKIPDGKPPNVFGLGERCMPRTYAMKVINECYLAWKTLVSNASLGGEVPRNLSVSKLTDLMAELEPDHVLSASDHLEATSDGEAEDYPASLIA Sbjct: 1 MRRNSNSSINLVSAGEEGTLEYRIQHVMEDHDSKVISAWHDIPLYVLDEFSNKPTGLLNFVCEIPRCSRKKFEIATKEPGNPIKQDEKKGVLREFKKGDIFFNYGCFPRTWEDPEHSHPDTGCAGDNDPLDVCEIGMRIVPTGDVRQVKVLGVLAMIDDGETDWKVIAIDADDRWAPELNDVEDVERLLPGVVDSIREWFRTYKIPDGKPPNVFGLGERCMPRTYAMKVINECYLAWKTLVSNASLGGEVPRNLSVSKLTDLMAELEPDHVLSASDHLEATSDGEAEDYPASLIA 295
BLAST of jgi.p|Trimin1|168050 vs. uniprot
Match: D8LCB9_ECTSI (Inorganic diphosphatase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCB9_ECTSI) HSP 1 Score: 409 bits (1050), Expect = 6.210e-141 Identity = 207/301 (68.77%), Postives = 238/301 (79.07%), Query Frame = 1 Query: 25 INLVSAGEEGTLEYRIQHVMEDH--DSKVISAWHDIPLYVLDEFSNKPTGLLNFVCEIPRCSRKKFEIATKEPGNPIKQDEKKGVLREFKKGDIFFNYGCFPRTWEDPEHSHPDTGCAGDNDPLDVCEIGMRIVPTGDVRQVKVLGVLAMIDDGETDWKVIAIDADDRWAPELNDVEDVERLLPGVVDSIREWFRTYKIPDGKPPNVFGLGERCMPRTYAMKVINECYLAWKTLVSNASLGGEVPRNLSVSKLTDLMAELEPDHVLSASDHLEATSDGEAE------------DYPASLIA 885 +N+ +GEEGTL+YR++ M +H +VIS WHDIPLYV DE + K TG LNFVCEIPRCSRKKFEIAT E GNPIKQD KKG+LREFKKGDIFFNYGCFPRTWEDPEH HPDT GDNDPLDVCEIG+RIV TGDVRQVKVLGVLAMID+ ETDWKVI ID +DRWAPELNDVEDVERLLPGVV +IREWFRTYK+PDGKP N F L ERCM R+YAMKV++EC+LAW+ LV A LG EV NLSVS+L+D+ +++E + SA++ LE +DG +YP SLIA Sbjct: 25 LNIFESGEEGTLDYRLRFAMAEHAHSQQVISVWHDIPLYVRDE-AEKCTGHLNFVCEIPRCSRKKFEIATNEVGNPIKQDTKKGLLREFKKGDIFFNYGCFPRTWEDPEHVHPDTKFPGDNDPLDVCEIGLRIVATGDVRQVKVLGVLAMIDEDETDWKVIVIDREDRWAPELNDVEDVERLLPGVVPAIREWFRTYKVPDGKPENKFALDERCMGRSYAMKVVSECHLAWRNLVGKAELG-EVKSNLSVSRLSDMGSDIELE---SATNALEDEADGXXXXXXXXXXXXXEGEYPTSLIA 320
BLAST of jgi.p|Trimin1|168050 vs. uniprot
Match: A0A7S2V803_9STRA (Inorganic diphosphatase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V803_9STRA) HSP 1 Score: 382 bits (981), Expect = 5.370e-130 Identity = 188/293 (64.16%), Postives = 220/293 (75.09%), Query Frame = 1 Query: 4 RRNSNSSINLVSAGEEGTLEYRIQHV--MEDHDSKVISAWHDIPLYVLDEFSNKPTGLLNFVCEIPRCSRKKFEIATKEPGNPIKQDEKKGVLREFKKGDIFFNYGCFPRTWEDPEHSHPDTGCAGDNDPLDVCEIGMRIVPTGDVRQVKVLGVLAMIDDGETDWKVIAIDADDRWAPELNDVEDVERLLPGVVDSIREWFRTYKIPDGKPPNVFGLGERCMPRTYAMKVINECYLAWKTLVSNASLGGEVPRNLSVSKLTDLMAELEPDHVLSASDHLEA----TSDGEAED 864 RR S+ ++ G TLEYRIQHV + + +V+S WHD+PLY DE+ + TG LNFVCEIPRCSRKK+EIAT EPGNPIKQDEKKG LR FKKGDIFFNYGCFPRTWEDP+ HPD G GDNDPLDVCEIG+RIVPT +VRQVK+LGVL +IDDGE DWK+IAID DRWAPELND++DVERLLPGV+ +IREWFRTYK+PDGKP NVFGL ERCMP+ YAM V+ EC+ AWK LV+ + +NLSV L DL+ E +P L+A DG+ ED Sbjct: 58 RRRSSGTLVTEEVGHADTLEYRIQHVELTDSEEKRVLSLWHDLPLYCTDEYGLR-TGSLNFVCEIPRCSRKKYEIATDEPGNPIKQDEKKGQLRVFKKGDIFFNYGCFPRTWEDPDFVHPDVGVGGDNDPLDVCEIGIRIVPTAEVRQVKILGVLCLIDDGEADWKIIAIDETDRWAPELNDMDDVERLLPGVIGTIREWFRTYKVPDGKPENVFGLEERCMPKEYAMHVVAECHQAWKGLVTQQ----KPAKNLSVVNLKDLVMEADPSTDAPPQHQLDAYNAPAGDGDDED 345
BLAST of jgi.p|Trimin1|168050 vs. uniprot
Match: A0A6U4FME2_9STRA (Inorganic diphosphatase n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4FME2_9STRA) HSP 1 Score: 360 bits (923), Expect = 5.100e-120 Identity = 168/242 (69.42%), Postives = 196/242 (80.99%), Query Frame = 1 Query: 4 RRNSNSSINLVSAGEEGTLEYRIQHVMEDHDSKVISAWHDIPLYVLDEFSNKPTGLLNFVCEIPRCSRKKFEIATKEPGNPIKQDEKKGVLREFKKGDIFFNYGCFPRTWEDPEHSHPDTGCAGDNDPLDVCEIGMRIVPTGDVRQVKVLGVLAMIDDGETDWKVIAIDADDRWAPELNDVEDVERLLPGVVDSIREWFRTYKIPDGKPPNVFGLGERCMPRTYAMKVINECYLAWKTLVSN 729 ++ S+SS++L S G+EGT +R+Q E ++ IS WHD+ L+ +E SN TG LNFVCEIP+ SRKKFE+AT EP NPIKQD KKG+LREFKKGDIFFNYGCFPRTWEDP HPD G GDNDPLDVCEIG++IVPTG VRQVKVLG L MIDDGE DWKVI ID +DRWAP+LNDVEDVERLLPG V ++REWFRTYKIPDGKPPN FGL ERCMPR YAM+++ E + AW+ LV + Sbjct: 138 KKRSHSSVSLSSLGDEGTQSHRVQAACE-RSNEPISFWHDVALFHREEESNAATGALNFVCEIPKFSRKKFEVATNEPQNPIKQDTKKGMLREFKKGDIFFNYGCFPRTWEDPCFVHPDAGVGGDNDPLDVCEIGLQIVPTGAVRQVKVLGCLCMIDDGEADWKVIVIDVNDRWAPDLNDVEDVERLLPGTVSAVREWFRTYKIPDGKPPNRFGLNERCMPREYAMQIVGETHHAWRRLVQH 378
BLAST of jgi.p|Trimin1|168050 vs. uniprot
Match: B8C276_THAPS (Inorganic diphosphatase n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C276_THAPS) HSP 1 Score: 346 bits (887), Expect = 2.240e-116 Identity = 169/268 (63.06%), Postives = 203/268 (75.75%), Query Frame = 1 Query: 13 SNSSINLVSAGEEGTLEYRIQHVMEDHDSKVISAWHDIPLYVLDEFSNKPTGLLNFVCEIPRCSRKKFEIATKEPGNPIKQDEKKGVLREFKKGDIFFNYGCFPRTWEDPEHSHPDT-GCAGDNDPLDVCEIGMRIVPTGDVRQVKVLGVLAMIDDGETDWKVIAIDADDRWAPELNDVEDVERLLPGVVDSIREWFRTYKIPDGKPPNVFGLGERCMPRTYAMKVINECYLAWKTLVSNASLGG---------EVPRNLSVSKLTDL 786 SNS+++L+S G+E T EYRI+ V + SK IS WHD+ L +D +++PT LNFVCEIP+ SRKKFEIAT E GN IKQDEKKGVLREFKKGDIFFNYGC PRTWEDP + HPD GC GDNDP+DVCEIG RIV TG++R VKVLG+L MID+GE DWKV+ IDA+D+WAP LNDV+DVE+ LPG + +IREWFRTYKIPDGKPPNVFGL E+ M + YA+++I EC AWK L++ G + R LS S L DL Sbjct: 28 SNSNLDLLSHGDENTTEYRIKAVDKAGSSKPISLWHDVTLVHVDPATDRPTPYLNFVCEIPKFSRKKFEIATDEVGNFIKQDEKKGVLREFKKGDIFFNYGCLPRTWEDPTYIHPDAEGCRGDNDPVDVCEIGARIVKTGEIRPVKVLGILCMIDEGEADWKVVTIDAEDKWAPFLNDVDDVEKHLPGTLSAIREWFRTYKIPDGKPPNVFGLDEKFMDKHYALEIIKECNHAWKDLITGEKERGMEHCDDTVKTLVRKLSKSNLVDL 295
BLAST of jgi.p|Trimin1|168050 vs. uniprot
Match: A0A6S8XBJ4_9STRA (Inorganic diphosphatase n=2 Tax=Lithodesmiaceae TaxID=49247 RepID=A0A6S8XBJ4_9STRA) HSP 1 Score: 338 bits (868), Expect = 1.780e-113 Identity = 168/273 (61.54%), Postives = 201/273 (73.63%), Query Frame = 1 Query: 13 SNSSINLVSAGEEGTLEYRIQHVMED---HDSKVISAWHDIPLYVLDEFSNKPTGLLNFVCEIPRCSRKKFEIATKEPGNPIKQDEKKGVLREFKKGDIFFNYGCFPRTWEDPEHSHPDT-GCAGDNDPLDVCEIGMRIVPTGDVRQVKVLGVLAMIDDGETDWKVIAIDADDRWAPELNDVEDVERLLPGVVDSIREWFRTYKIPDGKPPNVFGLGERCMPRTYAMKVINECYLAWKTLVSNASLGG---------EVPRNLSVSKLTDLMA 792 SN+++ LV GE TLEYRI+ V ++ K IS WHDI L +D +++PT LNFVCEIP+ +RKK+EIAT E GN IKQDEKKG LREFKKGDIFFNYGC PRTWEDP HPD GC GDNDPLDVCEIG +IVPTGDVR VK+LGVL MID+GE DWKV+ IDA+D+WAP LND+ DVE+ LPG + +IREWFRTYKIPDGKPPNVFGL E+ M ++YA+++I EC AWK L++ ++ R LS S L DL A Sbjct: 26 SNANLALVGTGESDTLEYRIKAVEKEGINKGKKEISLWHDITLVHVDPATDRPTPYLNFVCEIPKFTRKKYEIATDEVGNAIKQDEKKGKLREFKKGDIFFNYGCLPRTWEDPTFIHPDAEGCRGDNDPLDVCEIGAKIVPTGDVRPVKILGVLCMIDEGEADWKVVVIDAEDKWAPFLNDINDVEKHLPGQLSAIREWFRTYKIPDGKPPNVFGLDEKFMDKSYALEIIKECNHAWKELITGEKERKMEHLDEGVKKLVRKLSKSNLVDLAA 298
BLAST of jgi.p|Trimin1|168050 vs. uniprot
Match: K0RW68_THAOC (Inorganic diphosphatase n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RW68_THAOC) HSP 1 Score: 338 bits (866), Expect = 3.130e-113 Identity = 169/272 (62.13%), Postives = 205/272 (75.37%), Query Frame = 1 Query: 13 SNSSINLVSAGEEGTLEYRIQHVMEDHDSKVISAWHDIPLYVLDEFSNKPTGLLNFVCEIPRCSRKKFEIATKEPGNPIKQDEKKGVLREFKKGDIFFNYGCFPRTWEDPEHSHPDT-GCAGDNDPLDVCEIGMRIVPTGDVRQVKVLGVLAMIDDGETDWKVIAIDADDRWAPELNDVEDVERLLPGVVDSIREWFRTYKIPDGKPPNVFGLGERCMPRTYAMKVINECYLAWKTLVS----------NASLGGEVPRNLSVSKLTDLMAE 795 S+S++ L S G+E T E+RI+ + SK IS WHD+ L +D +++PT LNFVCEIP+ +RKKFEIAT E GN IKQDEKKGVLREFKKGDIFFNYGC PRTWEDP HPD GC GDNDP+DVCEIG RI+ TGD+R VKVLG+L MID+GE DWKV+ IDA+D+WAP LNDV+DVE+LLPG + +IREWFRTYKIPDGKPPNVFGL E+ M + YA+++I EC AWK L++ +A + G V R LS S L DL A+ Sbjct: 26 SSSNLELSSHGDEQTTEFRIK-ASDKSGSKPISLWHDVTLVHVDPATDRPTPYLNFVCEIPKFTRKKFEIATDEVGNFIKQDEKKGVLREFKKGDIFFNYGCLPRTWEDPTFVHPDAEGCRGDNDPVDVCEIGSRIIGTGDIRPVKVLGILCMIDEGEADWKVVTIDAEDKWAPFLNDVDDVEKLLPGTLSAIREWFRTYKIPDGKPPNVFGLDEKFMDKHYALEIIKECNHAWKELITGEKERNLEKCDAEVRGLV-RKLSKSNLLDLDAD 295
BLAST of jgi.p|Trimin1|168050 vs. uniprot
Match: A0A6V1AFR6_9STRA (Inorganic diphosphatase n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A6V1AFR6_9STRA) HSP 1 Score: 337 bits (865), Expect = 4.430e-113 Identity = 166/271 (61.25%), Postives = 205/271 (75.65%), Query Frame = 1 Query: 13 SNSSINLVSAGEEGTLEYRIQHVMEDHDSKVISAWHDIPLYVLDEFSNKPTGLLNFVCEIPRCSRKKFEIATKEPGNPIKQDEKKGVLREFKKGDIFFNYGCFPRTWEDPEHSHPDT-GCAGDNDPLDVCEIGMRIVPTGDVRQVKVLGVLAMIDDGETDWKVIAIDADDRWAPELNDVEDVERLLPGVVDSIREWFRTYKIPDGKPPNVFGLGERCMPRTYAMKVINECYLAWKTLVS----------NASLGGEVPRNLSVSKLTDLMA 792 S++++ ++S G+E TLEYRI+ + SK IS WHD+ L +D +++PT LNFVCEIP+ SRKK+EIAT E GN IKQDEKKGVLREFKKGDIFFNYGC PRTWEDP HPD GC GDNDP+DVCEIG +IV TG++R VK+LG+L MID+GE DWKV+AIDA+D+WAP LND++DV + LPG +D+IREWFRTYKIPDGKPPNVFGL E+ M + YA+++I EC AWK L++ N + G V R LS S L DL A Sbjct: 26 SSNNLEILSHGDEDTLEYRIK-ASDKTGSKPISLWHDVTLVHVDPATDRPTPYLNFVCEIPKFSRKKYEIATDEVGNFIKQDEKKGVLREFKKGDIFFNYGCLPRTWEDPTFVHPDAEGCRGDNDPVDVCEIGSKIVKTGEIRPVKILGILCMIDEGEADWKVVAIDAEDKWAPFLNDIDDVAKQLPGTLDAIREWFRTYKIPDGKPPNVFGLDEKFMDKHYALEIIKECNHAWKDLITGEKERQLEQCNDEVKGLV-RRLSKSNLVDLSA 294
BLAST of jgi.p|Trimin1|168050 vs. uniprot
Match: A0A7S3VDZ4_9STRA (Inorganic diphosphatase n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3VDZ4_9STRA) HSP 1 Score: 336 bits (862), Expect = 6.610e-113 Identity = 165/268 (61.57%), Postives = 201/268 (75.00%), Query Frame = 1 Query: 13 SNSSINLVSAGEEGTLEYRIQHVMEDHDSKVISAWHDIPLYVLDEFSNKPTGLLNFVCEIPRCSRKKFEIATKEPGNPIKQDEKKGVLREFKKGDIFFNYGCFPRTWEDPEHSHPDT-GCAGDNDPLDVCEIGMRIVPTGDVRQVKVLGVLAMIDDGETDWKVIAIDADDRWAPELNDVEDVERLLPGVVDSIREWFRTYKIPDGKPPNVFGLGERCMPRTYAMKVINECYLAWKTLVSN------ASLGGEVP---RNLSVSKLTDL 786 SNS++ L+ GE L YR++ V + K IS WHD+ L +D +++PT LNFVCEIP+ SRKK+EIAT E GNPIKQDEKKGVLREFKKGDIFFNYGC PRTWEDP HPD GC GDNDP+DVCEIG++IV GDVR VK+LG+L MID+GE DWKV+ IDA+D+WAP LND+ DVE LPG +D+IREWFRTYKIPDGKPPNVFGL E+ M ++YA+++I EC AWK L++ +S+G +V R LS S L L Sbjct: 9 SNSNLQLLHEGE--GLNYRMKTVPKVGGKKDISLWHDVTLVHVDPTTSRPTPYLNFVCEIPKFSRKKYEIATDEVGNPIKQDEKKGVLREFKKGDIFFNYGCLPRTWEDPTFVHPDAEGCRGDNDPVDVCEIGLKIVKPGDVRPVKILGILCMIDEGEADWKVVTIDAEDKWAPYLNDINDVEEQLPGTLDAIREWFRTYKIPDGKPPNVFGLDEKFMDKSYALEIIKECNHAWKELITGEKERKISSMGDDVQKLVRKLSKSNLLSL 274
BLAST of jgi.p|Trimin1|168050 vs. uniprot
Match: A0A7S0AEZ5_9STRA (Inorganic diphosphatase (Fragment) n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0AEZ5_9STRA) HSP 1 Score: 333 bits (854), Expect = 1.680e-112 Identity = 158/229 (69.00%), Postives = 183/229 (79.91%), Query Frame = 1 Query: 37 SAGEEGTLEYRIQHVMED---HDSKVISAWHDIPLYVLDEFSNKPTGLLNFVCEIPRCSRKKFEIATKEPGNPIKQDEKKGVLREFKKGDIFFNYGCFPRTWEDPEHSHPDT-GCAGDNDPLDVCEIGMRIVPTGDVRQVKVLGVLAMIDDGETDWKVIAIDADDRWAPELNDVEDVERLLPGVVDSIREWFRTYKIPDGKPPNVFGLGERCMPRTYAMKVINECYLAW 711 S GEEGTLEYRI+ +D K IS WHD+ L +D +++PT LNFVCEIP+ SRKK+EIAT E GNPIKQDEKKG LREFKKGDIFFNYGC PRTWEDP HPD GC GDNDP+DVC+IGMRIV G++R VKVLG+L MID+GE DWKV+AIDA+D+WAP LND+ DVE+ LPG +D+IREWFRTYKIPDGKPPNVFGLGER M + Y ++VI EC AW Sbjct: 2 SHGEEGTLEYRIKAHEKDGVAKGKKEISLWHDVTLVHIDPATDRPTPYLNFVCEIPKFSRKKYEIATDEVGNPIKQDEKKGKLREFKKGDIFFNYGCLPRTWEDPTFFHPDAEGCRGDNDPVDVCDIGMRIVQPGEIRPVKVLGILCMIDEGEADWKVVAIDAEDKWAPFLNDINDVEKHLPGQLDAIREWFRTYKIPDGKPPNVFGLGERFMDKAYCLEVIKECNHAW 230 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|168050 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_7335 ID=mRNA_7335|Name=jgi.p|Trimin1|168050|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=888bp|location=Sequence derived from alignment at Contig_55:771801..775209+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGCGGCGCAACAGCAACTCCTCTATCAATCTGGTGTCTGCGGGAGAGGAback to top protein sequence of jgi.p|Trimin1|168050 >Trimin1|168050|e_gw1.55.196.1 ID=Trimin1|168050|e_gw1.55.196.1|Name=jgi.p|Trimin1|168050|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=296bp MRRNSNSSINLVSAGEEGTLEYRIQHVMEDHDSKVISAWHDIPLYVLDEFback to top mRNA from alignment at Contig_55:771801..775209+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_7335 ID=mRNA_7335|Name=jgi.p|Trimin1|168050|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=3409bp|location=Sequence derived from alignment at Contig_55:771801..775209+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_55:771801..775209+ >mRNA_7335 ID=mRNA_7335|Name=jgi.p|Trimin1|168050|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=888bp|location=Sequence derived from alignment at Contig_55:771801..775209+ (Tribonema minus UTEX_B_3156 )back to top |